TCONS_00016656 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016656
Unique NameTCONS_00016656
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2514

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016656 ID=TCONS_00016656|Name=TCONS_00016656|organism=Clytia hemisphaerica|type=transcript|length=2514bp
TGAATCTTGAGTAATGATGTTATTTCTGGATTATTGGAAATCAAGTAAAA
CAATTGTTTGTCTCAAGAACTATCGCTGAAAAATTTCTGGCATTTTTGAG
AAATGTTTCGTCCTACACCAAAGAAAGGTTTGGAGAACTATGTTGGTTTC
GCAAACCTCCCCAATCAAGTGTTCAGAAAAAGCGTCAAAAAGGGATTCCA
ATTTACATTAATGGTTGTTGGTGAAAGTGGTTTGGGTAAATCAACGCTGA
TCAATTCATTATTTCTCACCGATATATACACGAGCACCGTCTACGAAGAT
GCTGCTGCCAAATTTGGTAAAACTATGACAGTCAACGCGTCGACGTTTGA
ATTAAAAGAAGGAGGCGTTCGTCTACAGCTGACGGTGGTGGACACGCCAG
GTTTCGGTGATAATATTGATAATACTGACTGTTGGAATTCGGTGATACAA
AATATCGAAGCGAAATTCGAAGATTACTTGAATGCAGAATCACGCGTAAA
CAGGACGACCGTACAGGATACGCGTGTTCATTGTTGTTTATATTTCATCG
CACCTACCGGCCATGGGTTGAAGCCATTGGATGtagaatttatgaaaaaa
ttacaTAATAAAGTCAATATCGTTCCAGTCATCGCAAAAGCAGATACGCT
GACAGGAGATGAATGTAATAGGTTCAAACAACAAattttaaaagaaatcg
aAGACCACCAGATCAACATTTACAGATTCCCTCCACTTAGTGACGATGAG
TCCGAAAATGACCTCGCTGCACTAAGGCGTATCCCATTCGCAGTGGTTGG
AAGCAATACAGTATTAGAAGTCGGTGGTAAAAAAATCCGCGGACGTAAAT
ATCCATGGGGTATCGTCGAAGttGAAAATATCGAACATTGTGATTTCATC
GCACTGAGGAATTTACTGATCCGAACTCATATGCAAGACTTAATTGACGT
CACCAATGACGTACATTACGAGAACTTCCGCAGCGAACGGTTATCTGTAC
TTACTGGAGGCGGTAACTCCATCACAAGTGCTGCGCTGAACATCAATCCC
ATGGAACAGATCGAACGAGAGCGCGAAGATCAAGAGAAAAAACTGAAGAA
GATGGAACAAGAAATGGAACAAGTCTTCGAAATGAAagtcaaagaaaaga
aaaagaaactcaAAGATTCAGAAGCCGAGTTCAACCGTAAATTTGACGTC
ACCATGAAAACATTGGaacaaacgaaaaaagaattagAAGATAAACGTAG
GAAGTTCGAAGAAGAACGCAACCAGTTCGACAACAGCCAATCAGCACATA
ACTTGGATAGTAGCAGAGTCGCCgacaaagataaaaagaaaaaagcaaaa
ggTGGATTTTTTTAAAGCGAAATTTTGTTGATAATAATCAAAAATCGACA
ATAGACTTTACCTCGACTCGAGTCCATCGCAGCAGACGTtggaaacattt
tttgaaagaatttatATTTTGCATCGTATCCACACATCACTTTTACCAAT
AAATCACGTGATCGGAGCTCGGTAAAATAttatgaaaatgatgacgtcat
gttGACTAGAAAAGGATTATGGGTCATGGGATATTCTTGGAGGCGATGAA
AACGGTGCATTGTGGGACGTTGACTCGCCCACGTTTCATCGGCCAGTTGT
Ttataatatattattttgatgaatccaattttacaatgaaaaattttagt
ccttttttcagttttttttttcgtcttttttttttagtgtACCTCTTACA
AATTAGCGGTTTTTATCTCTGAGTCTTTTGAGGATACTGCTTTTCTCAGG
GTGagaataatttttcattcaGCTTACATTGTTTTCAATTCTTAACAAAa
atgcctcgttttgaaattattgccatggtgattaactcccagtggatttt
attGAAATTACTTCCTACTCATAAAAGAATCCATAAAAGAATTCATAAAA
TTCataaaagaatcatttaattctcaagggacataatcaccattgtaatt
gtttgaatacgaggcaagtgatgttcgtgacgtaatttatgaaaaggtca
tCAAGTAGTCCNtgaggcaagtgatgtttgtgacgtaatttatgaaaagg
tcatCAAGTAGtccattttttatttcatattgtTTCTTTAACTTGTTATA
TACTAGATTTGTATAGCGAAATTCTTTGATAGGTAGAAACCAACCAATTT
TTGTCATATATCTTGTCATTCTCTATAAGGGAGCAATATTAAATTCTATA
TGTCGGACATGTCCGTGAATAGGAATTCATATTTCCCCAAAACTAACAAA
CTTAAGTTATGAATATTACAATTTTCATTACCAACAATATTTATAAGATG
AACTCGCAAAATTATTTACCGCGggctttttttttgttattttctatTAG
TTATTACCCTCTGCTTACTACTTtataatgttttaatttttactgTAACT
TTCGTTTTGAAAAACCGTGAACTTTTTACACCATGAAATAAgtttctgtt
ttcttttgatgCCT
Run BLAST on NCBI

transcript from alignment at sc0000246:285501..301367+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016656 ID=TCONS_00016656|Name=TCONS_00016656|organism=Clytia hemisphaerica|type=transcript|length=15867bp|location=Sequence derived from alignment at sc0000246:285501..301367+ (Clytia hemisphaerica)
TGAATCTTGAGTAATGATGTTATTTCTGGATTATTGGAAATCAAGTAAAA CAATTGTTTGTCTCAAGAACTATCGCTGAAAAATTTCTGGCATTTTTGAG AAATGTTTCGTGTATGTTTTTATGTTGAATTACAATtaattcaaaatata ttatttcaaaaaaaataatcaattttttataatcttgtctcttgTTTACG GTCTAGTCCAACTAACTCGTGTCTACAGGGATATTTgaccctgcatatgc gagtgcaTCTAATTCCTCAATATGCACCCAGTCACTAATCAGAATTTTCA cagtatttttcatattttccatAATTTGTGGAAAAAGCTGACTTGgcaga aaaagtaaaacaaatcaAAGTGAAAACTCAAAGCTCATTTGTAAACAAAG TCGCTAGTGTTTGAGAGtttttataaatgtggctgatgtttttaatagtt ttgaaagttttaggAGCTTGTTAAAGAAGTTGATTATGTGATTCTACCTG GGTTACCAAAGTTTTGATTAACCCTTTCAACAAGGTTTCACTCACAGTTT GTGTCATACAAACTGTATTTATTAGACTTTTGACGCCAGACTTTAGACGT TGCGCCAGACTAGTTAGAACACCAGCTAGAAACTTTGCATGTCGGAGATA AGAAAATTtatatctaaaattttgagtcGGGATAACCAGGTTTTATATAA CCCTACAATTCAGAAAAGCCGAAGTCTGAAAAAGCCATACTATGAGTTGG TGCAATTTCTGGCGTCCTTTTCTGTCAAAAGGTTTGAAAACTCTGAAAAG ATTTCCATAGAAAGTATGTCAAGGAATAAATTCACCGACCGTTCTACAAA AGGTCTATAGTGTTAGTGTAACCATAGTGCAAAAAGGGGTTTGACCCCCC TTCTTTAAAACGATGCCTCTTGACATCCctcaacctttaaaaatgcataT CCTCCAAGGGTcttggacaaaaatagctaacaaatatatgtgaaataGCC TCATAGAGAGAAAGAGAAATAAtgaacttctttcttctttttgattcAGA ATAATCAAACAGAAAgcttcctttcatgcagaccaaagTTAATAACAGTG CTTGAAAGTAATCTACAATATGTATCTTAGCCCCCCTTCTTTAAGCAATT GCCACCCCCATTTTTCTTCTACGTGCCTGACtgactttgttttttttcaa aatctaaaaatgataaaattgaaTTTGCAAAGCAAATGGCGGATGGACTT AATAGGTTTTTTGCAGATATATTTAACTGAACAATTTGAAAAGTCTGAAT CTTAGAGCTTATCAACTTAAAATACCACAATGGAAATCACACAAAAGtca caataaaaaaatcttctgcttcaaatatttttttagatctTGACCTTCTG TATatagattttgagaaatttatttttattacacCGACTGACTGACTGTT ATTCCTACCCCAGACAGTAGGTTAGTTAGTAGGTTGTTACAGTATTCAAA AAGATTcttcaataaaaatattgaaaatttgcaaattGATTTAATTTATA TAGATATTGTTTAGTTAGTATTATAAGCAATTTTTGAAAGGCTTTACAAT ACTTTTTTGCCTGGGGTAAATTGACTTATGGCTATGTGCAGCGGTTAAGG GTATGCTTTTTAAGatagcagaaatgcactgtaagggtatgaattctgag agccaatttttttcgctACACACACCCTCAGTAAACCCACTACCCCCCAA GGCTATTTTTACGAAAATTcttgaattgttttgtttagTTCTATCACCTT ATTCCAGCTTTTACATTTACAACTTATTGGACTAGACCAAGCAACTGTAC TTTCTTATTNTCATAGAGAGAAAGAGAAATAAtgaacttctttcttcttt ttgattcAGAATAATCAAACAGAAAgcttcctttcatgcagaccaaagtt cataacagtgcttgaaaGTAATCTACAATATGTATCTTAGCCCCCCTTCT TTAAGCAATTGCCACCCCCATTTTTCTTCTACGTGCCTGACtgactttgt tttttttcaaaatctaaaaatgataaaattgaaTTTGCAAAGCAAATGGC GGATGGACTTAATAGGTTTTTTGCAGATATATTTAACTGAACAATTTGAA AAGTCTGAATCTTAGAGCTTATCAACTTAAAATACCACAATGGAAATCAC ACAAAAGtcacaataaaaaaatcttctgcttcaaatatttttttagatct TGACCTTCTGTATatagattttgagaaatttatttttattacacCGACTG ACTGACTGTTATTCCTACCCCAGACAGTAGGTTAGTTAGTAGGTTGTTAC AGTATTCAAAAAGATTcttcaataaaaatattgaaaatttgcaaattGAT TTAATTTATATAGATATTGTTTAGTTAGTATTATAAGCAATTTTTGAAAG GCTTTACAATACTTTTTTGCCTGGGGTAAATTGACTTATGGCTATGTGCA GCGGTTAAGGGTATGCTTTTTAAGatagcagaaatgcactgtaagggtat gaattctgagagccaatttttttcgctACACACACCCTCAGTAAACCCAC TACCCCCCAAGGCTATTTTTACGAAAATTcttgaattgttttgtttagTT CTATCACCTTATTCCAGCTTTTACATTTACAACTTATTGGACTAGACCAA GCAACTGTACTTTCTTATTGAAACCTTCCAGTCGCATTGTTTAATTTTAA GTAGTCTctttatgtttcatttttttttatttagtagTTTCAACTGCTTC CTTTCCTTGAGGCCAGATTTCTAGTCTTCACCATTATATACTATATAAAT CTACTTTCAAAAGTTTGGATTCAACATGTTCATTCAAGAAAACTGTCCTT TTTGATTAAGAATTATGAAATTACCAGTGTCAAGTTTCACTTTTGAGACT TAGAAACCTTTTTAACTTTGTCAGAACTTAAGTTTGTGTTTGTCTGTGTA TGGATCTATTTTCCTTTGTTTGCAAATCCATAAACAAGCGTTGTCTAATC CTGAGGAATCTCACATCTAGTAAATTAAAATGggaaaatatagtaaaaaa tATAACTACACTTTTGTATATTTCTATCATTGATAAATAAAACTGAAATA TTCACTTTTTAGTCatgaaaattttacttcttgTTTCATAACAAACAAAC AACTTGTTAACCTCAAATTAAATGATATGTTGGTTTCTCAAGAAACCTTT CCACACTAGCCTATTTGAAACACCTTCTTTGTGAATATAAGATTGTAAAA ATTATTAACCTCTCATCCTCAATAATTAtacaaagaattttaaaattctc aTTACATTTGAGGTTTTTTGACATCAAGCTTACTACAAAACCgagagaaa attttatttcatctcacaaaaattttttatcaTCTACATCAGTTTTACGA TAGAGATTTGTATATGCTATCAGATTGTGGTTacagtttaaaaattttaa ttttcttcgTGCTTCAAATATCAATATTCGTATCATGAGTAGTGAAGTTG AAGGTGTTGCAGTGTCAACTATGCCTGTCATAAAAGTTACATCAGTTGCA AATAGTCCTTCTCCAAATCCAAGTGTATGTATAAATTCATCAGTTATACT TCCTTAGTCAGATACTAACATTGTATCAATTTTGTGTTTTGTGTTTAGAA TGTTTTTTCACAACATTTATTAGTAATACTGCTTTTTCAGTTTTGAGCAT TGTCATAATTTATTGACTCTTTTTTTTCAGCCTACACCAAAGAAAGGTTT GGAGAACTATGTTGGTTTCGCAAACCTCCCCAATCAAGTGTTCAGAAAAA GCGTCAAAAAGGGATTCCAATTTACATTAATGGTTGTTGgtaagatattt ttgtttttcactCACCATGAAATTGTGATCCTGACATGaagtttgaaata taaatgatcATATTAATTTAGTCAATCGAAAATAATGTTATTTTATTGAG AAGTGGGacttatattattttgcagcgGATTAGAATGAGAGTTTTTTCTC CTTAAACTATTTCTGTCATCATAATGTGCTAGCCAATTTGTCAAGTCATT TTTAATAGTACAAAATTATGTCAATAATGTCATTAGCAAAAATTCCTGAA TGAATTTCTCTGAAACTGAGTACacactttttcaaaagtaaatgacaaaa tgaaaatttgtcacATGGCTCCAGCTATGTAATTAGATTGTGTTTGTAAC GGATATTAATTCTAATAAAGtcacaaagaaaaagtttgtaatCCTGCAGA ACGTGACAACACAAATTTAAGATTATGTTTTATTTATTATAAAAATGTCT CTTTTATTATAAATGTTActttacaatgtatagcaatgtgccctccatAA ATGTTACTTTAGCAAGGTGTACCTTGAAAAGCCCGAAATCAATTCACTCC AAAATCATAATCAATATATCATTACAATGCTAAACATTTTGctcattgac aataaaaatcaattttaaaatgTAATCACACTTGCTTTGCCCTGTCATCA AACATGAATTAActgttttaagaatttttattgaatgaaatcaaatttgt ttacatccaaAAGATGCTGACTGAGAAAGTGAGCCAATGTGAGATTTTTC ATAATTAAACAACCGTTGGCTACTGAGAGATTTTTCTTTAGCTCCAATTT CGTTTTAAACAGTTCAAATCTAATCCGTTATCCGTAGATTATTTACTGAA CTGGACTTATTATAGCGTTCTTTTAATTCTCATCAAAACAATATGTCAAT ATATACACAATATATTTATCTTTCACTATAAAACAGCTTGAACACTACCC CTAGAGCTTTTTTAGCGAAATTTTATTCACAGAAAAAAAGAATAGATTTT TTATCAGAATATTACATTTCAATTTACTTTGGCTGACATAGAAATGTCAA CTGTCAAGAAGACGAACTTAGGAGTATGATTTTTCTACCAAATAAAATAA TGTGATGAAAATAATACGAAAGGAGAAATGAAGGTTTATAAGTTCACTTT GCTTGTCGTAGGTAGGAGACATAACACTTATTTTCCTGAACATTGTTTCG TCTTTTTGACGTCTAAATAATGATAATGTATGGGGATAAAGTACCATTGA GTTTGATGGATGAAGAAAGCTAACTTCATGATTTTGTTTGGGTTTTCCTG GAATGAATAGAAAACTCTTTTCGATATTATGGTTTTAGAAGTCTTTGACA TTCTGTCATTTTAGAATGAGAGCTTTTTTCTTCGGTTCGACTTTATTTCC TGGATGACAAACTGTTGACAGTCTAAAGCCTGATAAATACTATAAGCCAC GTATTTTGCCTCTTTTAAAGCTTTTGTGAGCTGTCAGCAGTGACTTTTTC ATATTGGCGTTATTAACATTatgtttcaaaactatttgGAGTTTCAGAAA GTTAATCTATAAATATCTAAAGACGTTATTCAGCTTATCTGATTGTTATT AAACTATGGAgatattttattactttttacttgataaaCATGAAAAATTC TATGGGTCACTCCTCATATTGTTGCTGATGCCTATCTGAACTTGCATTGC GTGTGTAACTTAACCTCATACAAATTAATATGATCAATTGACACTATTGA CTTTTCGATTGCTCTGAATTTTATACACATAACCATCTTTAGGGGACTCA TCAAATATTGCTCCTATCTTTGTTTTCCTGtattatattaaaaaaactta aaCTGACAAACAAACTTaccttatttctttgtttttttaccCGATAAACT GAAAATTCAACCTGTTAATGAAATGGGCCAATGGATTTTGAATTAATCAA ACAGGAAATTTCTAAGATGCCTGCTTCTTGATTTAAACCTGGCAGGGATT TTTTATATGATTATAAAAATGTCGGACCCTTCCCTTTTCTTCATGAATGG TTATCATATGCTTCAAagttgtcttttattttatgtTACAGGTGAAAGTG GTTTGGGTAAATCAACGCTGATCAATTCATTATTTCTCACCGATATATAC ACGAGCACCGTCTACGAAGATGCTGCTGCCAAATTTGGTAAAACTATGAC AGTAAGTTGATCTTTAAACCGTTTTTANGCTGCCAAATTTGGTAAAACTA TGACAGTAAGTTGATTTTTAAACCGTTTTTATTCATATTGTTATCTTTGC GCTCGTGGAAAAGCCAATATTTCATCCGCTATCCTTATCACTCATGACGT AGTGTTTGATGCAGAAACACCCGGAAAAAGACAGGGCTTTCAGTTCAGAA TTTCAAATATTAAAACTATACTATCAGCAAGCTCCGGCCAAGTTTTCAGT GTTTTTGCATCAAAGATATGGGATTGCATAAACAGACAATGTTAGAGGAC TTGAAACATTTTAGCATTACATGAAAGAAAAGCCTGTATTTAAGGCAGTG GTCAACACATAGTTATAATCTTATTTGTATGTCAAAAAAGGGCGGGTAAT TCGTTGTATGGGATATACATTATGTCTTCTATTGATGATTGATACAATCA TATTACAACTCGCTAGAGACGAAAATTCTATGTTCTAATGTCTAAGTACC AAATGTTTTTTAGACCGTGTAATATCTGTGTTTAAAACAAAGTCTCTAAT TTTTAAACTAAAGAGTCGAATTAAAGATTTATAGTGTTTAGGGTGTTTAG CACAATTAGAACACAATTTCTCAGAGagtaaagaaaattaattaatCACG GCTAGTTCTTAAAGTGATGTTCCTTCCGACCTAGTGTGCTTTTTGATGTA GACATGACATTATAATGTAACAAAATTATCAACGATAAAAACAACGGCCC TAAGGAGTTTCAGTGAAACGTGAATAGTATCAACCCCTTTCATTGCAAAT TCTTTCCTTGATTATGTTTAGGTCAACGCGTCGACGTTTGAATTAAAAGA AGGAGGCGTTCGTCTACAGCTGACGGTGGTGGACACGCCAGGTTTCGGTG ATAATATTGATAATACTGACTGGTAAGATAGTGGGTTTCTTCATGTCCCT CCTCCCTTTTCAGTCCTTTTTTATGATATTTCAAGTGCTATTGGTGTTTC ATTGGACGACTTTTTACTACTTAAATACTGTATgttgttaaaagtttttc cgactAAGAACACTGCTAACAATAAAGTCTTTCTTGAAGATTGAAGTGGG AATACCTAACCTATGATTATTACATTAGTGCAGTAGACAGATAGTAATGT TGGAACTTTTCTTAAAGTTCGCCTTTCTTAATTACAACAGACCAACTAAG TTTGCGGCTAAGCGATTGTTAAATTCGCTGCCTATGACTTTACTTTGCTT TGATAGTCAGGACTTCTAAGTTCATGCCGGTTTGCAAAAGTCGTTTTCTT GAGTAAAGAAAAactatattatattatatttatgtatTTGAAGAGAGAAA ATCGATGCTAACTCTTCACTTTACCCTCCGACACTCACACCCTTCCAACT CTTTAGTCTCAAACGTTGATGCTGATTGATCCTTCAATGAATGACGAGAG ATATTACATCACAACTGATTAATATTAAACcacaaatactttaaaaatga CTTCAAATTTTAACACATAAAATAGCTTACGGCATGCTTATAATTAAAGG GTCTTTTCTCACATCATATTTCTTTGAGGTCGCTTACCATATAGTATCGG TTTAAGTCTTACATAATGATATTGGTTTGAGAACAAAATTTCTCCTATAT TTGGGTGTGAAGTTCCCCAACAGACGAAATAAGATACATAACACAACTCG TTTTTTGTTTGACGAATTTGTAATCTaaatatagaaattttatcgataAC CATTTGATGGTGAGAAAAAGACTAAgtcattttaactttttatagaCTCT ATCGATGATTTAAgttctttaaattttttcccACTCCACGAGATTTCTTG GCTTGAGTTAATGATGACTTCATCATAATCTCTTCCCATGTTCTAGTTCC TACTATTCCTTTTCTTTCTTTGCTAAGAAAAATCACTgcttttcaaaata acatagTAGCCTGGATCGAGAAAGTTTTATCAGCTCTTCAGTGTTTAACC AATTCATAGTTCGAAATTATTTTGGTAGAATACTAACAATAACAGTAAAC ATAATTTCTAGATcctcaaatttttcttcttaCAGTTGGAATTCGGTGAT ACAAAATATCGAAGCGAAATTCGAAGATTACTTGAATGCAGAATCACGCG TAAACAGGACGACCGTACAGGATACGCGTGTTCATTGTTGTTTATATTTC ATCGCACCTACCGGCCATGGGTAAGTTCCAACAAAGTTTGTTTTCATCAT GCTTACAATATAAAAGATAATGATGgtaaaatttttttggattatctttt atattgttttatttcaaattgtcagCTGGTATTACGCTTACTGTTTGCTC TTTTCTAAACATGATTGTTAACCATGAACATTTCGTCCAGTTCATAGGAA ATATACTCTCTTTTCCGTCTTGCGAGGAAGTGGATATTAAATTACTGAAC TTAGCTTTACACTTAGTGTTTTGAGCTCTCTGGTGACAACAGAgcagtct atgctcgcttacccgagcagcactgatgagtcctgggaaggacgaaacac gtgtctgcggatagatATATTACTGAACTGAATGTTGACACTCGCAAAAC TGGTTGCAGATCAGCAAGACGTCTTGTGCTAAAAAAACTTTCTGCTTAGA TGTTTGTACATCTCTTTGATGTAGCAAAACGTCCGATGTGTCCAGTCAGA TTGTCATTCAATtaaccttcgcatttcttttcAGGTTGAAGCCATTGGAT GtagaatttatgaaaaaattacaTAATAAAGTAAGTATACTATGTTTACA TCAATCTTGAGAAGGTTGGAAAAATTATGTCAGGGGGGTTTTTAAATTAC TTATATTCGTTTTCAAAATGAGTTGCTTGACTTGACCACCATCATTCTCC ACATTCTTTCGAACCAATAATATTTTCTGGAatttcatgtttcaataaac CAACCAATATCTGAAGAAATTCACCCACTTTTACCATACTGTACAGTGTG TATCACTCTAATCACACGATTCATCTGAGCACTCTTCTTCATACCATTGC TTTTCATTTGGGCACTCTTACCTGACATCAACGCTCTTTTTCTATTCAGG TCAATATCGTTCCAGTCATCGCAAAAGCAGATACGCTGACAGGAGATGAA TGTAATAGGTTCAAACAACAAGTAAGTGGTCCTCATAACAACTCATTTCG ACCATAAATCTACTCCTAACCCTTATTCGAATACTTTCTGTGTCTATTCT TGTGTGAGCCAACGGTTCTTATGATATAACACATGGTTCTTTCTGTCTTT CTAAGCCAGACGCTTGCTTCTTAAACTGGTACTGTATATAATTTTGTTCt actttttaccttttttagattttaaaagaaatcgaAGACCACCAGATCAA CATTTACAGATTCCCTCCACTTAGTGACGATGAGTCCGAAAATGACCTCG CTGCACTAAGGGTAAATATAATGGTCATCACTATTCACTGCTTATGATAT TATTCTCATCTTTTGTGTAAATGATCCCgtctttttcttaatatttcagG ACTTTAAAATCTGATTTCCTTTGTCATGGGTCAACTGCCGATCATcgaaa tttgaataagattttCACTGTCATTTCATACTCAAAATACATTATTCCTA CGAACCATCTTTGCAAAGATCTTCAACAGAATAGGCAAATGTCTATTATA GTCACGACTTTCCCTTCCAATCAACTAAATAGCTCCCATTTTTATGTATC TCTTTTCTTGCAGCGTATCCCATTCGCAGTGGTTGGAAGCAATACAGTAT TAGAAGTCGGTGGTAAAAAAATCCGCGGACGTAAATATCCATGGGGTATC GTCGAAGGTAAGTGATATCTTTGATCAGGTGAATATTTTGTTTCAATTAC TTGTTTGCTGAGCAAAAGAACTGGCATAACTACCTTATTTATCCAATTTA GATGTTCATGCTTTTAGCAATCGTgagatgttttttatttttgtttaatt taaatATGCCATTATAATACTTGAGCTTGTAGAGTCTCAAAGGTAATACT GAAACAGTATAAATGGCTACCACNCAATGTCGTTATAATACTTGATTAAC GAGCTTGCAAAGTCTCAAAGGTAATACCGAAACAGTATAAATGGCTACCA CCGCTATGGCTGCTAAAGTTTTGAAcgtttttatttcatttcatttcagt tGAAAATATCGAACATTGTGATTTCATCGCACTGAGGAATTTACTGATCC GAACTCATATGCAAGACTTAATTGACGTCACCAATGACGTACATTACGAG AACTTCCGCAGCGAACGGTTATCTGTACTTACTGGAGGCGGTAACTCCAT CACAAGGTATGCAGTAGCATAGAACTTCGTGTCACTTCAATCCAACCATA GTATAGATCAGTTCAGTGAATTTAAGAAGTTTTCCTtatcatagtttgca cccccccctttttaatagggggggatgccaactttctggagggcctttgt agggggggtaccgagatctaccgaaaaaactaggggggatgggaatgtag gggggggggggcaaataaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcggtccttttgcccag ctgcccccccccccgggagtcaAATTCTTCTTAACTCGAGCCTCTTCATA CGTAAAGTAAAATTCATTTGCTAATTTTCATTACCTATCTATAACGCAAC TTTTCTCTTTCAAGTGCTGCGCTGAACATCAATCCCATGGAACAGATCGA ACGAGAGCGCGAAGATCAAGAGAAAAAACTGAAGAAGATGGAACAAGAAA TGGAACAAGTCTTCGAAATGAAagtcaaagaaaagaaaaagaaactcaAA GATTCAGAAGCCGAGGTAAGACAATGTTTTTGCAGTCATTTTTTTATAGT AGATGCTCTTTGTTTCTGAAAATAGTTTTTCTTATATGTAATGAAACTCT CTTGGCGTTTTTTATACCTTCCACGATTTAAAGTTCTTCAAACAGCCCTA GTTGCCTACCAAAAGAAACGTGATGATAAATAAAGATGTTAGAGATAGAA ATGAGCAAATTAAACAAGATCTTGATGGTTAATGAATGATTATTTGAAAT CCATTTCTTTTTTCACTCCTGTTTTCAGTTCAACCGTAAATTTGACGTCA CCATGAAAACATTGGaacaaacgaaaaaagaattagAAGATAAACGTAGG AAGTTCGAAGAAGAACGCAACCAGTTCGACAACAGCCAATCAGCACATAA CTTGGATAGTAGCAGGTCCAGTAGTAGATCTTCTTTGCAGAAGTAAGTGA GATGACTGTCTGAGTGGTCTGGTTACCCCCTGTATCGTACGATTTCGATT GTTGTTGCGCATGCGCTATGTTTGCTTATTCATAAAAACCGTACCATAGT TTAGTGGGTAAACAAATATATCAACGCGATTTTAGCTGCAATCGaaattg taaataaaaaaacaacaatgctTTGTAGCTTTAACTTTACACTAGCTCTA AAAAAATCACGTACGAGTCTTGACTTAGAGGAATGTACTAGAACGAGACT TCCAgacaaatgattttaaaatccAGTAGATGGCAAACGATAGTCTCATT CGATAAACGTTTCTTCTTCCCGAGAGCGAatatatttcttttgaaagtcT CTTTCCGAAGAGAAAGCTACAAAACAGGGGTAACCAGCGGGAGAACAAAA TGCTTTTCCATAGCACTCCACTGCACAAAATATAATCAACAACACACAAA TACtaacaaaacaacaacaacaaaatatcTCACAAACACTCCATCATTAA AAACATACAATCCATTCATACATGCGTATATGTGCACGTACTAGAATTGA TACCCATGAAGTGGTCTTTCAAGTCGGCAGATCCTGAACAGTCTTTTACT GGGCTACAAATTATCTCACGATTCATTAAGCTTTTTCTGAAACGTTTAAA CCTGTGTTTATTTACCTCCCATCATACTACGATGTAAAGGTAGAGAACAC CTTTGATAAACCCCGTTTAGAACAAATTTTTAACTGCGTTACTTCAAAAA CGACACAAGCTTTAGCTTCATAAATGTAGTCTATTAAAAGGACTATTTAA AGTAAAGTTCAGCCGAATTTCTGAGGCAATCTTAAGACGAAAGATCACTT CATTGTGCCACGAGTAAATCTcagaagtgttttttttttcattttatttt ttatgtttcttcGTATTTCTAGAGAAAGTGTCGTTGATTCGTACGACCAA CCATCAAACACATGCGAACATTTTCCCATGCCAGGCATGTATGTTTCAAA AACAccatcaaaaactaaaaaagattaacaaaaaaagctaaacaaAATCA TAACCAATTTCTTTCATGGTATCTTTTcttgcaaaaataaaatctaacaT CGCATGCGCACTTTTTTTCTAATACACGAGATTTTTGCATGAAATATTGG TGGTAGTTGCTGTCCAAGacagttttaaagctatttctgGAAAGACTCTA AAACTGACAATTTTCTCTTGGACAACAACAGAACTGATCAGCCAATCAAA TTATTATGCACGATTATGCACTACCTGCACGTAATTTTTAATTGCATTTT GTTCTCTTGAGTATGTTCATTAGAAAAAGGAGTTTGACAAGTTATCCGtg atatttatgacgtaatgtttagaAGCACTCAAACAAGACTTGATGTTTCc caataattttgaatttaaaagattacgtcatgaatatcacaaATATCAGG CACAAGATTTAGTACCTTGGAATTTAAGAAAATGTTGGTACCTCGTATCG AATCTGCCGATAATAGAGATCTCGAACTATTTGCCAACGTCGGCATTTGC CGATAAGAGAGACCCCGACCTATTTACCAGAGGTTTTTTCTTTAAGTTTA TTGAAAGTAAGATTTTGAACTAGATTTCATTAAATAGCACAGTTGAATAA TAAGAATATACGTAAAGAATGCTTTTCataattatacatttttcaactca aagtaaACACGTATCACTTATGTCTGATATCTTTCATAAAATAAAGCCAA ATGTGATGGTAAACTTTGTGGTCGCTTTTGTCGGCATATGCCTACATCTG GCAAATGggtcgaaccttcttttttttccgtggcaaataggtcgaacctt aaaaaatacggacggcagttaaagggttaaagggataatcagatggtttg taatattcTCTGCATGGGTATTCCCTTAAAAGTTCTGAGCAAGACCTCCA AATCTTTTTGTGTAATAGcccttttttagagatttcaaattgtcATAACT CAACGTTGGAAATTTGCTAGCTAAAAATATTTGGAGGTTTTACTCGGGAA CATTTGAGTTTCTGTAGGCCAAATATCTCTCTGATTATCCTTTTAAATCT CTTAGTTCGTTCTATTAATTAAAGTGACTGGGTTATCCTTATTCTGTAAA ACTCCTTTTTCGTGTAGGTGTGTCGAGTAGAGTGATCGACagattaattt ttattttattgcatGATTATTTCGATTGAAATTCATGACATGTGCCAATG TGACTTTCATCGGATTAGATTATGCGAGATTTAATTTTACGATTCATTTC TGCAAATCAGCGTCTTTAAATATTTTGCGTTGACCTAATGGCGAAAATCA TTTGTAAATGGCCCTGACAAATTCAGAGGGTCTTTTTAGCCGGAAACCTT ATCTTAAAGCTTTTCGTGAATATAATATCGCGAGTCGGTGATCTTATGCG ATTTCGCTAATCTTATTTTCACGAAAAAGGTAAAAATTCGCGGAAATAAA TTAAATCTTGCTAAAATTATTCCGGCTAAAGTACGTCATTCAGCCCCCTG AATTAGTTTTCCGATAGGAGAAATGATATAATATGGCTGGTGAATTTCAG AAGTAATAGACTAGTTAGAATTAACCGGAacgtttttttgaaattgtttt gttatttGTCTCTCTACAGAGTCGCCgacaaagataaaaagaaaaaagca aaaggTGGATTTTTTTAAAGCGAAATTTTGTTGATAATAATCAAAAATCG ACAATAGACTTTACCTCGACTCGAGTCCATCGCAGCAGACGTtggaaaca ttttttgaaagaatttatATTTTGCATCGTATCCACACATCACTTTTACC AATAAATCACGTGATCGGAGCTCGGTAAAATAttatgaaaatgatgacgt catgttGACTAGAAAAGGATTATGGGTCATGGGATATTCTTGGAGGCGAT GAAAACGGTGCATTGTGGGACGTTGACTCGCCCACGTTTCATCGGCCAGT TGTTtataatatattattttgatgaatccaattttacaatgaaaaatttt agtccttttttcagttttttttttcgtcttttttttttagtgtACCTCTT ACAAATTAGCGGTTTTTATCTCTGAGTCTTTTGAGGATACTGCTTTTCTC AGGGTGagaataatttttcattcaGCTTACATTGTTTTCAATTCTTAACA AAaatgcctcgttttgaaattattgccatggtgattaactcccagtggat tttattGAAATTACTTCCTACTCATAAAAGAATCCATAAAAGAATTCATA AAATTCataaaagaatcatttaattctcaagggacataatcaccattgta attgtttgaatacgaggcaagtgatgttcgtgacgtaatttatgaaaagg tcatCAAGTAGTCCNtgaggcaagtgatgtttgtgacgtaatttatgaaa aggtcatCAAGTAGtccattttttatttcatattgtTTCTTTAACTTGTT ATATACTAGATTTGTATAGCGAAATTCTTTGATAGGTAGAAACCAACCAA TTTTTGTCATATATCTTGTCATTCTCTATAAGGGAGCAATATTAAATTCT ATATGTCGGACATGTCCGTGAATAGGAATTCATATTTCCCCAAAACTAAC AAACTTAAGTTATGAATATTACAATTTTCATTACCAACAATATTTATAAG ATGAACTCGCAAAATTATTTACCGCGggctttttttttgttattttctat TAGTTATTACCCTCTGCTTACTACTTtataatgttttaatttttactgTA ACTTTCGTTTTGAAAAACCGTGAACTTTTTACACCATGAAATAAgtttct gttttcttttgatgCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009313XLOC_009313Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016656-exon-sc0000246-1491911889:285501..285611TCONS_00016656-exon-sc0000246-1491911889:285501..285611Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:285501..285611TCONS_00016656-exon-sc0000246-1510915933:285501..285611Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:285501..285611TCONS_00016656-exon-sc0000246-1575043694:285501..285611Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:289281..289389TCONS_00016656-exon-sc0000246-1491911889:289281..289389Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:289281..289389TCONS_00016656-exon-sc0000246-1510915933:289281..289389Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:289281..289389TCONS_00016656-exon-sc0000246-1575043694:289281..289389Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:291492..291601TCONS_00016656-exon-sc0000246-1491911889:291492..291601Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:291492..291601TCONS_00016656-exon-sc0000246-1510915933:291492..291601Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:291492..291601TCONS_00016656-exon-sc0000246-1575043694:291492..291601Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:292422..292522TCONS_00016656-exon-sc0000246-1491911889:292422..292522Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:292422..292522TCONS_00016656-exon-sc0000246-1510915933:292422..292522Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:292422..292522TCONS_00016656-exon-sc0000246-1575043694:292422..292522Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:293686..293820TCONS_00016656-exon-sc0000246-1491911889:293686..293820Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:293686..293820TCONS_00016656-exon-sc0000246-1510915933:293686..293820Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:293686..293820TCONS_00016656-exon-sc0000246-1575043694:293686..293820Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:294335..294380TCONS_00016656-exon-sc0000246-1491911889:294335..294380Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:294335..294380TCONS_00016656-exon-sc0000246-1510915933:294335..294380Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:294335..294380TCONS_00016656-exon-sc0000246-1575043694:294335..294380Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:294700..294771TCONS_00016656-exon-sc0000246-1491911889:294700..294771Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:294700..294771TCONS_00016656-exon-sc0000246-1510915933:294700..294771Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:294700..294771TCONS_00016656-exon-sc0000246-1575043694:294700..294771Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:294969..295061TCONS_00016656-exon-sc0000246-1491911889:294969..295061Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:294969..295061TCONS_00016656-exon-sc0000246-1510915933:294969..295061Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:294969..295061TCONS_00016656-exon-sc0000246-1575043694:294969..295061Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:295364..295457TCONS_00016656-exon-sc0000246-1491911889:295364..295457Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:295364..295457TCONS_00016656-exon-sc0000246-1510915933:295364..295457Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:295364..295457TCONS_00016656-exon-sc0000246-1575043694:295364..295457Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:295800..295956TCONS_00016656-exon-sc0000246-1491911889:295800..295956Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:295800..295956TCONS_00016656-exon-sc0000246-1510915933:295800..295956Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:295800..295956TCONS_00016656-exon-sc0000246-1575043694:295800..295956Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:296915..297065TCONS_00016656-exon-sc0000246-1491911889:296915..297065Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:296915..297065TCONS_00016656-exon-sc0000246-1510915933:296915..297065Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:296915..297065TCONS_00016656-exon-sc0000246-1575043694:296915..297065Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:297329..297465TCONS_00016656-exon-sc0000246-1491911889:297329..297465Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:297329..297465TCONS_00016656-exon-sc0000246-1510915933:297329..297465Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:297329..297465TCONS_00016656-exon-sc0000246-1575043694:297329..297465Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1491911889:300170..301367TCONS_00016656-exon-sc0000246-1491911889:300170..301367Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1510915933:300170..301367TCONS_00016656-exon-sc0000246-1510915933:300170..301367Clytia hemisphaericaexon
TCONS_00016656-exon-sc0000246-1575043694:300170..301367TCONS_00016656-exon-sc0000246-1575043694:300170..301367Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:285501..301367 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.241345 0.0739349 4.41611 5.07483 0.0482037 0.832802 8.15613 0.0371418 32.6298 25.7684 15.7558 14.04 37.7781 30.4104 27.5011 22.0548 7.50635 15.227 22.9574 25.6522 11.4628 12.9239 4.87349 5.21003 0.000348529 0.00636864 0 1.819 21.937 30.3409
Blast
BLAST of TCONS_00016656 vs. Swiss-Prot (Human)
Match: SEPT7 (Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2)

HSP 1 Score: 464.922 bits (1195), Expect = 3.760e-155
Identity = 251/394 (63.71%), Postives = 309/394 (78.43%), Query Frame = 1
Query:  121 KKGLENYVGFANLPNQVFRKSVKKGFQFTLMVVGESGLGKSTLINSLFLTDIYTSTVYEDAAAKFGKTMTVNASTFELKEGGVRLQLTVVDTPGFGDNIDNTDCWNSVIQNIEAKFEDYLNAESRVNRTTVQDTRVHCCLYFIAPTGHGLKPLDVEFMKKLHNKVNIVPVIAKADTLTGDECNRFKQQILKEIEDHQINIYRFPPLSDDESENDLAA--LRRIPFAVVGSNTVLEVGGKKIRGRKYPWGIVEVENIEHCDFIALRNLLIRTHMQDLIDVTNDVHYENFRSERLSVLTGGG--NSITSAALNINPMEQIEREREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNRKFDVTMKTLEQTKKELEDKRRKFEEERNQFDNSQ 1290
            +K LE YVGFANLPNQV+RKSVK+GF+FTLMVVGESGLGKSTLINSLFLTD+Y S  Y   + +  KT+ V  S   +KEGGV+L LT+VDTPGFGD +DN++CW  VI  I++KFEDYLNAESRVNR  + D RV CCLYFIAP+GHGLKPLD+EFMK+LH KVNI+P+IAKADTLT +EC +FK+QI+KEI++H+I IY FP  +DDE EN L      R+P AVVGSNT++EV GK++RGR+YPWG+ EVEN EHCDF  LRN+LIRTHMQDL DVTN+VHYEN+RS +L+ +T  G  N+     L  +P+ Q+E ER +   K+KKME EMEQVFEMKVKEK +KLKDSEAE  R+ +   K LE   KELE+KRR+FE+E+  ++  Q
Sbjct:   24 QKNLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLY-SPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPE-TDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKKMEMEMEQVFEMKVKEKVQKLKDSEAELQRRHEQMKKNLEAQHKELEEKRRQFEDEKANWEAQQ 415          
The following BLAST results are available for this feature:
BLAST of TCONS_00016656 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEPT73.760e-15563.71Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2[more]
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