TCONS_00016658 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016658
Unique NameTCONS_00016658
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2585

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016658 ID=TCONS_00016658|Name=TCONS_00016658|organism=Clytia hemisphaerica|type=transcript|length=2585bp
TTTTACGATAGAGATTTGTATATGCTATCAGATTGTGGTTacagtttaaa
aattttaattttcttcgTGCTTCAAATATCAATATTCGTATCATGAGTAG
TGAAGTTGAAGGTGTTGCAGTGTCAACTATGCCTGTCATAAAAGTTACAT
CAGTTGCAAATAGTCCTTCTCCAAATCCAAGTCCTACACCAAAGAAAGGT
TTGGAGAACTATGTTGGTTTCGCAAACCTCCCCAATCAAGTGTTCAGAAA
AAGCGTCAAAAAGGGATTCCAATTTACATTAATGGTTGTTGGTGAAAGTG
GTTTGGGTAAATCAACGCTGATCAATTCATTATTTCTCACCGATATATAC
ACGAGCACCGTCTACGAAGATGCTGCTGCCAAATTTGGTAAAACTATGAC
AGTCAACGCGTCGACGTTTGAATTAAAAGAAGGAGGCGTTCGTCTACAGC
TGACGGTGGTGGACACGCCAGGTTTCGGTGATAATATTGATAATACTGAC
TGTTGGAATTCGGTGATACAAAATATCGAAGCGAAATTCGAAGATTACTT
GAATGCAGAATCACGCGTAAACAGGACGACCGTACAGGATACGCGTGTTC
ATTGTTGTTTATATTTCATCGCACCTACCGGCCATGGGTTGAAGCCATTG
GATGtagaatttatgaaaaaattacaTAATAAAGTCAATATCGTTCCAGT
CATCGCAAAAGCAGATACGCTGACAGGAGATGAATGTAATAGGTTCAAAC
AACAAattttaaaagaaatcgaAGACCACCAGATCAACATTTACAGATTC
CCTCCACTTAGTGACGATGAGTCCGAAAATGACCTCGCTGCACTAAGGCG
TATCCCATTCGCAGTGGTTGGAAGCAATACAGTATTAGAAGTCGGTGGTA
AAAAAATCCGCGGACGTAAATATCCATGGGGTATCGTCGAAGttGAAAAT
ATCGAACATTGTGATTTCATCGCACTGAGGAATTTACTGATCCGAACTCA
TATGCAAGACTTAATTGACGTCACCAATGACGTACATTACGAGAACTTCC
GCAGCGAACGGTTATCTGTACTTACTGGAGGCGGTAACTCCATCACAAGT
GCTGCGCTGAACATCAATCCCATGGAACAGATCGAACGAGAGCGCGAAGA
TCAAGAGAAAAAACTGAAGAAGATGGAACAAGAAATGGAACAAGTCTTCG
AAATGAAagtcaaagaaaagaaaaagaaactcaAAGATTCAGAAGCCGAG
TTCAACCGTAAATTTGACGTCACCATGAAAACATTGGaacaaacgaaaaa
agaattagAAGATAAACGTAGGAAGTTCGAAGAAGAACGCAACCAGTTCG
ACAACAGCCAATCAGCACATAACTTGGATAGTAGCAGAGTCGCCgacaaa
gataaaaagaaaaaagcaaaaggTGGATTTTTTTAAAGCGAAATTTTGTT
GATAATAATCAAAAATCGACAATAGACTTTACCTCGACTCGAGTCCATCG
CAGCAGACGTtggaaacattttttgaaagaatttatATTTTGCATCGTAT
CCACACATCACTTTTACCAATAAATCACGTGATCGGAGCTCGGTAAAATA
ttatgaaaatgatgacgtcatgttGACTAGAAAAGGATTATGGGTCATGG
GATATTCTTGGAGGCGATGAAAACGGTGCATTGTGGGACGTTGACTCGCC
CACGTTTCATCGGCCAGTTGTTtataatatattattttgatgaatccaat
tttacaatgaaaaattttagtccttttttcagttttttttttcgtctttt
ttttttagtgtACCTCTTACAAATTAGCGGTTTTTATCTCTGAGTCTTTT
GAGGATACTGCTTTTCTCAGGGTGagaataatttttcattcaGCTTACAT
TGTTTTCAATTCTTAACAAAaatgcctcgttttgaaattattgccatggt
gattaactcccagtggattttattGAAATTACTTCCTACTCATAAAAGAA
TCCATAAAAGAATTCATAAAATTCataaaagaatcatttaattctcaagg
gacataatcaccattgtaattgtttgaatacgaggcaagtgatgttcgtg
acgtaatttatgaaaaggtcatCAAGTAGTCCNtgaggcaagtgatgttt
gtgacgtaatttatgaaaaggtcatCAAGTAGtccattttttatttcata
ttgtTTCTTTAACTTGTTATATACTAGATTTGTATAGCGAAATTCTTTGA
TAGGTAGAAACCAACCAATTTTTGTCATATATCTTGTCATTCTCTATAAG
GGAGCAATATTAAATTCTATATGTCGGACATGTCCGTGAATAGGAATTCA
TATTTCCCCAAAACTAACAAACTTAAGTTATGAATATTACAATTTTCATT
ACCAACAATATTTATAAGATGAACTCGCAAAATTATTTACCGCGggcttt
ttttttgttattttctatTAGTTATTACCCTCTGCTTACTACTTtataat
gttttaatttttactgTAACTTTCGTTTTGAAAAACCGTGAACTTTTTAC
ACCATGAAATAAgtttctgttttcttttgatgCCT
Run BLAST on NCBI

transcript from alignment at sc0000246:288943..301367+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016658 ID=TCONS_00016658|Name=TCONS_00016658|organism=Clytia hemisphaerica|type=transcript|length=12425bp|location=Sequence derived from alignment at sc0000246:288943..301367+ (Clytia hemisphaerica)
TTTTACGATAGAGATTTGTATATGCTATCAGATTGTGGTTacagtttaaa
aattttaattttcttcgTGCTTCAAATATCAATATTCGTATCATGAGTAG
TGAAGTTGAAGGTGTTGCAGTGTCAACTATGCCTGTCATAAAAGTTACAT
CAGTTGCAAATAGTCCTTCTCCAAATCCAAGTGTATGTATAAATTCATCA
GTTATACTTCCTTAGTCAGATACTAACATTGTATCAATTTTGTGTTTTGT
GTTTAGAATGTTTTTTCACAACATTTATTAGTAATACTGCTTTTTCAGTT
TTGAGCATTGTCATAATTTATTGACTCTTTTTTTTCAGCCTACACCAAAG
AAAGGTTTGGAGAACTATGTTGGTTTCGCAAACCTCCCCAATCAAGTGTT
CAGAAAAAGCGTCAAAAAGGGATTCCAATTTACATTAATGGTTGTTGgta
agatatttttgtttttcactCACCATGAAATTGTGATCCTGACATGaagt
ttgaaatataaatgatcATATTAATTTAGTCAATCGAAAATAATGTTATT
TTATTGAGAAGTGGGacttatattattttgcagcgGATTAGAATGAGAGT
TTTTTCTCCTTAAACTATTTCTGTCATCATAATGTGCTAGCCAATTTGTC
AAGTCATTTTTAATAGTACAAAATTATGTCAATAATGTCATTAGCAAAAA
TTCCTGAATGAATTTCTCTGAAACTGAGTACacactttttcaaaagtaaa
tgacaaaatgaaaatttgtcacATGGCTCCAGCTATGTAATTAGATTGTG
TTTGTAACGGATATTAATTCTAATAAAGtcacaaagaaaaagtttgtaat
CCTGCAGAACGTGACAACACAAATTTAAGATTATGTTTTATTTATTATAA
AAATGTCTCTTTTATTATAAATGTTActttacaatgtatagcaatgtgcc
ctccatAAATGTTACTTTAGCAAGGTGTACCTTGAAAAGCCCGAAATCAA
TTCACTCCAAAATCATAATCAATATATCATTACAATGCTAAACATTTTGc
tcattgacaataaaaatcaattttaaaatgTAATCACACTTGCTTTGCCC
TGTCATCAAACATGAATTAActgttttaagaatttttattgaatgaaatc
aaatttgtttacatccaaAAGATGCTGACTGAGAAAGTGAGCCAATGTGA
GATTTTTCATAATTAAACAACCGTTGGCTACTGAGAGATTTTTCTTTAGC
TCCAATTTCGTTTTAAACAGTTCAAATCTAATCCGTTATCCGTAGATTAT
TTACTGAACTGGACTTATTATAGCGTTCTTTTAATTCTCATCAAAACAAT
ATGTCAATATATACACAATATATTTATCTTTCACTATAAAACAGCTTGAA
CACTACCCCTAGAGCTTTTTTAGCGAAATTTTATTCACAGAAAAAAAGAA
TAGATTTTTTATCAGAATATTACATTTCAATTTACTTTGGCTGACATAGA
AATGTCAACTGTCAAGAAGACGAACTTAGGAGTATGATTTTTCTACCAAA
TAAAATAATGTGATGAAAATAATACGAAAGGAGAAATGAAGGTTTATAAG
TTCACTTTGCTTGTCGTAGGTAGGAGACATAACACTTATTTTCCTGAACA
TTGTTTCGTCTTTTTGACGTCTAAATAATGATAATGTATGGGGATAAAGT
ACCATTGAGTTTGATGGATGAAGAAAGCTAACTTCATGATTTTGTTTGGG
TTTTCCTGGAATGAATAGAAAACTCTTTTCGATATTATGGTTTTAGAAGT
CTTTGACATTCTGTCATTTTAGAATGAGAGCTTTTTTCTTCGGTTCGACT
TTATTTCCTGGATGACAAACTGTTGACAGTCTAAAGCCTGATAAATACTA
TAAGCCACGTATTTTGCCTCTTTTAAAGCTTTTGTGAGCTGTCAGCAGTG
ACTTTTTCATATTGGCGTTATTAACATTatgtttcaaaactatttgGAGT
TTCAGAAAGTTAATCTATAAATATCTAAAGACGTTATTCAGCTTATCTGA
TTGTTATTAAACTATGGAgatattttattactttttacttgataaaCATG
AAAAATTCTATGGGTCACTCCTCATATTGTTGCTGATGCCTATCTGAACT
TGCATTGCGTGTGTAACTTAACCTCATACAAATTAATATGATCAATTGAC
ACTATTGACTTTTCGATTGCTCTGAATTTTATACACATAACCATCTTTAG
GGGACTCATCAAATATTGCTCCTATCTTTGTTTTCCTGtattatattaaa
aaaacttaaaCTGACAAACAAACTTaccttatttctttgtttttttaccC
GATAAACTGAAAATTCAACCTGTTAATGAAATGGGCCAATGGATTTTGAA
TTAATCAAACAGGAAATTTCTAAGATGCCTGCTTCTTGATTTAAACCTGG
CAGGGATTTTTTATATGATTATAAAAATGTCGGACCCTTCCCTTTTCTTC
ATGAATGGTTATCATATGCTTCAAagttgtcttttattttatgtTACAGG
TGAAAGTGGTTTGGGTAAATCAACGCTGATCAATTCATTATTTCTCACCG
ATATATACACGAGCACCGTCTACGAAGATGCTGCTGCCAAATTTGGTAAA
ACTATGACAGTAAGTTGATCTTTAAACCGTTTTTANGCTGCCAAATTTGG
TAAAACTATGACAGTAAGTTGATTTTTAAACCGTTTTTATTCATATTGTT
ATCTTTGCGCTCGTGGAAAAGCCAATATTTCATCCGCTATCCTTATCACT
CATGACGTAGTGTTTGATGCAGAAACACCCGGAAAAAGACAGGGCTTTCA
GTTCAGAATTTCAAATATTAAAACTATACTATCAGCAAGCTCCGGCCAAG
TTTTCAGTGTTTTTGCATCAAAGATATGGGATTGCATAAACAGACAATGT
TAGAGGACTTGAAACATTTTAGCATTACATGAAAGAAAAGCCTGTATTTA
AGGCAGTGGTCAACACATAGTTATAATCTTATTTGTATGTCAAAAAAGGG
CGGGTAATTCGTTGTATGGGATATACATTATGTCTTCTATTGATGATTGA
TACAATCATATTACAACTCGCTAGAGACGAAAATTCTATGTTCTAATGTC
TAAGTACCAAATGTTTTTTAGACCGTGTAATATCTGTGTTTAAAACAAAG
TCTCTAATTTTTAAACTAAAGAGTCGAATTAAAGATTTATAGTGTTTAGG
GTGTTTAGCACAATTAGAACACAATTTCTCAGAGagtaaagaaaattaat
taatCACGGCTAGTTCTTAAAGTGATGTTCCTTCCGACCTAGTGTGCTTT
TTGATGTAGACATGACATTATAATGTAACAAAATTATCAACGATAAAAAC
AACGGCCCTAAGGAGTTTCAGTGAAACGTGAATAGTATCAACCCCTTTCA
TTGCAAATTCTTTCCTTGATTATGTTTAGGTCAACGCGTCGACGTTTGAA
TTAAAAGAAGGAGGCGTTCGTCTACAGCTGACGGTGGTGGACACGCCAGG
TTTCGGTGATAATATTGATAATACTGACTGGTAAGATAGTGGGTTTCTTC
ATGTCCCTCCTCCCTTTTCAGTCCTTTTTTATGATATTTCAAGTGCTATT
GGTGTTTCATTGGACGACTTTTTACTACTTAAATACTGTATgttgttaaa
agtttttccgactAAGAACACTGCTAACAATAAAGTCTTTCTTGAAGATT
GAAGTGGGAATACCTAACCTATGATTATTACATTAGTGCAGTAGACAGAT
AGTAATGTTGGAACTTTTCTTAAAGTTCGCCTTTCTTAATTACAACAGAC
CAACTAAGTTTGCGGCTAAGCGATTGTTAAATTCGCTGCCTATGACTTTA
CTTTGCTTTGATAGTCAGGACTTCTAAGTTCATGCCGGTTTGCAAAAGTC
GTTTTCTTGAGTAAAGAAAAactatattatattatatttatgtatTTGAA
GAGAGAAAATCGATGCTAACTCTTCACTTTACCCTCCGACACTCACACCC
TTCCAACTCTTTAGTCTCAAACGTTGATGCTGATTGATCCTTCAATGAAT
GACGAGAGATATTACATCACAACTGATTAATATTAAACcacaaatacttt
aaaaatgaCTTCAAATTTTAACACATAAAATAGCTTACGGCATGCTTATA
ATTAAAGGGTCTTTTCTCACATCATATTTCTTTGAGGTCGCTTACCATAT
AGTATCGGTTTAAGTCTTACATAATGATATTGGTTTGAGAACAAAATTTC
TCCTATATTTGGGTGTGAAGTTCCCCAACAGACGAAATAAGATACATAAC
ACAACTCGTTTTTTGTTTGACGAATTTGTAATCTaaatatagaaatttta
tcgataACCATTTGATGGTGAGAAAAAGACTAAgtcattttaacttttta
tagaCTCTATCGATGATTTAAgttctttaaattttttcccACTCCACGAG
ATTTCTTGGCTTGAGTTAATGATGACTTCATCATAATCTCTTCCCATGTT
CTAGTTCCTACTATTCCTTTTCTTTCTTTGCTAAGAAAAATCACTgcttt
tcaaaataacatagTAGCCTGGATCGAGAAAGTTTTATCAGCTCTTCAGT
GTTTAACCAATTCATAGTTCGAAATTATTTTGGTAGAATACTAACAATAA
CAGTAAACATAATTTCTAGATcctcaaatttttcttcttaCAGTTGGAAT
TCGGTGATACAAAATATCGAAGCGAAATTCGAAGATTACTTGAATGCAGA
ATCACGCGTAAACAGGACGACCGTACAGGATACGCGTGTTCATTGTTGTT
TATATTTCATCGCACCTACCGGCCATGGGTAAGTTCCAACAAAGTTTGTT
TTCATCATGCTTACAATATAAAAGATAATGATGgtaaaatttttttggat
tatcttttatattgttttatttcaaattgtcagCTGGTATTACGCTTACT
GTTTGCTCTTTTCTAAACATGATTGTTAACCATGAACATTTCGTCCAGTT
CATAGGAAATATACTCTCTTTTCCGTCTTGCGAGGAAGTGGATATTAAAT
TACTGAACTTAGCTTTACACTTAGTGTTTTGAGCTCTCTGGTGACAACAG
Agcagtctatgctcgcttacccgagcagcactgatgagtcctgggaagga
cgaaacacgtgtctgcggatagatATATTACTGAACTGAATGTTGACACT
CGCAAAACTGGTTGCAGATCAGCAAGACGTCTTGTGCTAAAAAAACTTTC
TGCTTAGATGTTTGTACATCTCTTTGATGTAGCAAAACGTCCGATGTGTC
CAGTCAGATTGTCATTCAATtaaccttcgcatttcttttcAGGTTGAAGC
CATTGGATGtagaatttatgaaaaaattacaTAATAAAGTAAGTATACTA
TGTTTACATCAATCTTGAGAAGGTTGGAAAAATTATGTCAGGGGGGTTTT
TAAATTACTTATATTCGTTTTCAAAATGAGTTGCTTGACTTGACCACCAT
CATTCTCCACATTCTTTCGAACCAATAATATTTTCTGGAatttcatgttt
caataaacCAACCAATATCTGAAGAAATTCACCCACTTTTACCATACTGT
ACAGTGTGTATCACTCTAATCACACGATTCATCTGAGCACTCTTCTTCAT
ACCATTGCTTTTCATTTGGGCACTCTTACCTGACATCAACGCTCTTTTTC
TATTCAGGTCAATATCGTTCCAGTCATCGCAAAAGCAGATACGCTGACAG
GAGATGAATGTAATAGGTTCAAACAACAAGTAAGTGGTCCTCATAACAAC
TCATTTCGACCATAAATCTACTCCTAACCCTTATTCGAATACTTTCTGTG
TCTATTCTTGTGTGAGCCAACGGTTCTTATGATATAACACATGGTTCTTT
CTGTCTTTCTAAGCCAGACGCTTGCTTCTTAAACTGGTACTGTATATAAT
TTTGTTCtactttttaccttttttagattttaaaagaaatcgaAGACCAC
CAGATCAACATTTACAGATTCCCTCCACTTAGTGACGATGAGTCCGAAAA
TGACCTCGCTGCACTAAGGGTAAATATAATGGTCATCACTATTCACTGCT
TATGATATTATTCTCATCTTTTGTGTAAATGATCCCgtctttttcttaat
atttcagGACTTTAAAATCTGATTTCCTTTGTCATGGGTCAACTGCCGAT
CATcgaaatttgaataagattttCACTGTCATTTCATACTCAAAATACAT
TATTCCTACGAACCATCTTTGCAAAGATCTTCAACAGAATAGGCAAATGT
CTATTATAGTCACGACTTTCCCTTCCAATCAACTAAATAGCTCCCATTTT
TATGTATCTCTTTTCTTGCAGCGTATCCCATTCGCAGTGGTTGGAAGCAA
TACAGTATTAGAAGTCGGTGGTAAAAAAATCCGCGGACGTAAATATCCAT
GGGGTATCGTCGAAGGTAAGTGATATCTTTGATCAGGTGAATATTTTGTT
TCAATTACTTGTTTGCTGAGCAAAAGAACTGGCATAACTACCTTATTTAT
CCAATTTAGATGTTCATGCTTTTAGCAATCGTgagatgttttttattttt
gtttaatttaaatATGCCATTATAATACTTGAGCTTGTAGAGTCTCAAAG
GTAATACTGAAACAGTATAAATGGCTACCACNCAATGTCGTTATAATACT
TGATTAACGAGCTTGCAAAGTCTCAAAGGTAATACCGAAACAGTATAAAT
GGCTACCACCGCTATGGCTGCTAAAGTTTTGAAcgtttttatttcatttc
atttcagttGAAAATATCGAACATTGTGATTTCATCGCACTGAGGAATTT
ACTGATCCGAACTCATATGCAAGACTTAATTGACGTCACCAATGACGTAC
ATTACGAGAACTTCCGCAGCGAACGGTTATCTGTACTTACTGGAGGCGGT
AACTCCATCACAAGGTATGCAGTAGCATAGAACTTCGTGTCACTTCAATC
CAACCATAGTATAGATCAGTTCAGTGAATTTAAGAAGTTTTCCTtatcat
agtttgcacccccccctttttaatagggggggatgccaactttctggagg
gcctttgtagggggggtaccgagatctaccgaaaaaactaggggggatgg
gaatgtaggggggggggggcaaataaNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcggtcctt
ttgcccagctgcccccccccccgggagtcaAATTCTTCTTAACTCGAGCC
TCTTCATACGTAAAGTAAAATTCATTTGCTAATTTTCATTACCTATCTAT
AACGCAACTTTTCTCTTTCAAGTGCTGCGCTGAACATCAATCCCATGGAA
CAGATCGAACGAGAGCGCGAAGATCAAGAGAAAAAACTGAAGAAGATGGA
ACAAGAAATGGAACAAGTCTTCGAAATGAAagtcaaagaaaagaaaaaga
aactcaAAGATTCAGAAGCCGAGGTAAGACAATGTTTTTGCAGTCATTTT
TTTATAGTAGATGCTCTTTGTTTCTGAAAATAGTTTTTCTTATATGTAAT
GAAACTCTCTTGGCGTTTTTTATACCTTCCACGATTTAAAGTTCTTCAAA
CAGCCCTAGTTGCCTACCAAAAGAAACGTGATGATAAATAAAGATGTTAG
AGATAGAAATGAGCAAATTAAACAAGATCTTGATGGTTAATGAATGATTA
TTTGAAATCCATTTCTTTTTTCACTCCTGTTTTCAGTTCAACCGTAAATT
TGACGTCACCATGAAAACATTGGaacaaacgaaaaaagaattagAAGATA
AACGTAGGAAGTTCGAAGAAGAACGCAACCAGTTCGACAACAGCCAATCA
GCACATAACTTGGATAGTAGCAGGTCCAGTAGTAGATCTTCTTTGCAGAA
GTAAGTGAGATGACTGTCTGAGTGGTCTGGTTACCCCCTGTATCGTACGA
TTTCGATTGTTGTTGCGCATGCGCTATGTTTGCTTATTCATAAAAACCGT
ACCATAGTTTAGTGGGTAAACAAATATATCAACGCGATTTTAGCTGCAAT
CGaaattgtaaataaaaaaacaacaatgctTTGTAGCTTTAACTTTACAC
TAGCTCTAAAAAAATCACGTACGAGTCTTGACTTAGAGGAATGTACTAGA
ACGAGACTTCCAgacaaatgattttaaaatccAGTAGATGGCAAACGATA
GTCTCATTCGATAAACGTTTCTTCTTCCCGAGAGCGAatatatttctttt
gaaagtcTCTTTCCGAAGAGAAAGCTACAAAACAGGGGTAACCAGCGGGA
GAACAAAATGCTTTTCCATAGCACTCCACTGCACAAAATATAATCAACAA
CACACAAATACtaacaaaacaacaacaacaaaatatcTCACAAACACTCC
ATCATTAAAAACATACAATCCATTCATACATGCGTATATGTGCACGTACT
AGAATTGATACCCATGAAGTGGTCTTTCAAGTCGGCAGATCCTGAACAGT
CTTTTACTGGGCTACAAATTATCTCACGATTCATTAAGCTTTTTCTGAAA
CGTTTAAACCTGTGTTTATTTACCTCCCATCATACTACGATGTAAAGGTA
GAGAACACCTTTGATAAACCCCGTTTAGAACAAATTTTTAACTGCGTTAC
TTCAAAAACGACACAAGCTTTAGCTTCATAAATGTAGTCTATTAAAAGGA
CTATTTAAAGTAAAGTTCAGCCGAATTTCTGAGGCAATCTTAAGACGAAA
GATCACTTCATTGTGCCACGAGTAAATCTcagaagtgttttttttttcat
tttattttttatgtttcttcGTATTTCTAGAGAAAGTGTCGTTGATTCGT
ACGACCAACCATCAAACACATGCGAACATTTTCCCATGCCAGGCATGTAT
GTTTCAAAAACAccatcaaaaactaaaaaagattaacaaaaaaagctaaa
caaAATCATAACCAATTTCTTTCATGGTATCTTTTcttgcaaaaataaaa
tctaacaTCGCATGCGCACTTTTTTTCTAATACACGAGATTTTTGCATGA
AATATTGGTGGTAGTTGCTGTCCAAGacagttttaaagctatttctgGAA
AGACTCTAAAACTGACAATTTTCTCTTGGACAACAACAGAACTGATCAGC
CAATCAAATTATTATGCACGATTATGCACTACCTGCACGTAATTTTTAAT
TGCATTTTGTTCTCTTGAGTATGTTCATTAGAAAAAGGAGTTTGACAAGT
TATCCGtgatatttatgacgtaatgtttagaAGCACTCAAACAAGACTTG
ATGTTTCccaataattttgaatttaaaagattacgtcatgaatatcacaa
ATATCAGGCACAAGATTTAGTACCTTGGAATTTAAGAAAATGTTGGTACC
TCGTATCGAATCTGCCGATAATAGAGATCTCGAACTATTTGCCAACGTCG
GCATTTGCCGATAAGAGAGACCCCGACCTATTTACCAGAGGTTTTTTCTT
TAAGTTTATTGAAAGTAAGATTTTGAACTAGATTTCATTAAATAGCACAG
TTGAATAATAAGAATATACGTAAAGAATGCTTTTCataattatacatttt
tcaactcaaagtaaACACGTATCACTTATGTCTGATATCTTTCATAAAAT
AAAGCCAAATGTGATGGTAAACTTTGTGGTCGCTTTTGTCGGCATATGCC
TACATCTGGCAAATGggtcgaaccttcttttttttccgtggcaaataggt
cgaaccttaaaaaatacggacggcagttaaagggttaaagggataatcag
atggtttgtaatattcTCTGCATGGGTATTCCCTTAAAAGTTCTGAGCAA
GACCTCCAAATCTTTTTGTGTAATAGcccttttttagagatttcaaattg
tcATAACTCAACGTTGGAAATTTGCTAGCTAAAAATATTTGGAGGTTTTA
CTCGGGAACATTTGAGTTTCTGTAGGCCAAATATCTCTCTGATTATCCTT
TTAAATCTCTTAGTTCGTTCTATTAATTAAAGTGACTGGGTTATCCTTAT
TCTGTAAAACTCCTTTTTCGTGTAGGTGTGTCGAGTAGAGTGATCGACag
attaatttttattttattgcatGATTATTTCGATTGAAATTCATGACATG
TGCCAATGTGACTTTCATCGGATTAGATTATGCGAGATTTAATTTTACGA
TTCATTTCTGCAAATCAGCGTCTTTAAATATTTTGCGTTGACCTAATGGC
GAAAATCATTTGTAAATGGCCCTGACAAATTCAGAGGGTCTTTTTAGCCG
GAAACCTTATCTTAAAGCTTTTCGTGAATATAATATCGCGAGTCGGTGAT
CTTATGCGATTTCGCTAATCTTATTTTCACGAAAAAGGTAAAAATTCGCG
GAAATAAATTAAATCTTGCTAAAATTATTCCGGCTAAAGTACGTCATTCA
GCCCCCTGAATTAGTTTTCCGATAGGAGAAATGATATAATATGGCTGGTG
AATTTCAGAAGTAATAGACTAGTTAGAATTAACCGGAacgtttttttgaa
attgttttgttatttGTCTCTCTACAGAGTCGCCgacaaagataaaaaga
aaaaagcaaaaggTGGATTTTTTTAAAGCGAAATTTTGTTGATAATAATC
AAAAATCGACAATAGACTTTACCTCGACTCGAGTCCATCGCAGCAGACGT
tggaaacattttttgaaagaatttatATTTTGCATCGTATCCACACATCA
CTTTTACCAATAAATCACGTGATCGGAGCTCGGTAAAATAttatgaaaat
gatgacgtcatgttGACTAGAAAAGGATTATGGGTCATGGGATATTCTTG
GAGGCGATGAAAACGGTGCATTGTGGGACGTTGACTCGCCCACGTTTCAT
CGGCCAGTTGTTtataatatattattttgatgaatccaattttacaatga
aaaattttagtccttttttcagttttttttttcgtcttttttttttagtg
tACCTCTTACAAATTAGCGGTTTTTATCTCTGAGTCTTTTGAGGATACTG
CTTTTCTCAGGGTGagaataatttttcattcaGCTTACATTGTTTTCAAT
TCTTAACAAAaatgcctcgttttgaaattattgccatggtgattaactcc
cagtggattttattGAAATTACTTCCTACTCATAAAAGAATCCATAAAAG
AATTCATAAAATTCataaaagaatcatttaattctcaagggacataatca
ccattgtaattgtttgaatacgaggcaagtgatgttcgtgacgtaattta
tgaaaaggtcatCAAGTAGTCCNtgaggcaagtgatgtttgtgacgtaat
ttatgaaaaggtcatCAAGTAGtccattttttatttcatattgtTTCTTT
AACTTGTTATATACTAGATTTGTATAGCGAAATTCTTTGATAGGTAGAAA
CCAACCAATTTTTGTCATATATCTTGTCATTCTCTATAAGGGAGCAATAT
TAAATTCTATATGTCGGACATGTCCGTGAATAGGAATTCATATTTCCCCA
AAACTAACAAACTTAAGTTATGAATATTACAATTTTCATTACCAACAATA
TTTATAAGATGAACTCGCAAAATTATTTACCGCGggctttttttttgtta
ttttctatTAGTTATTACCCTCTGCTTACTACTTtataatgttttaattt
ttactgTAACTTTCGTTTTGAAAAACCGTGAACTTTTTACACCATGAAAT
AAgtttctgttttcttttgatgCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009313XLOC_009313Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016658-exon-sc0000246-1491911889:288943..289124TCONS_00016658-exon-sc0000246-1491911889:288943..289124Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:288943..289124TCONS_00016658-exon-sc0000246-1510915933:288943..289124Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:288943..289124TCONS_00016658-exon-sc0000246-1575043694:288943..289124Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:289281..289389TCONS_00016658-exon-sc0000246-1491911889:289281..289389Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:289281..289389TCONS_00016658-exon-sc0000246-1510915933:289281..289389Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:289281..289389TCONS_00016658-exon-sc0000246-1575043694:289281..289389Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:291492..291601TCONS_00016658-exon-sc0000246-1491911889:291492..291601Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:291492..291601TCONS_00016658-exon-sc0000246-1510915933:291492..291601Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:291492..291601TCONS_00016658-exon-sc0000246-1575043694:291492..291601Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:292422..292522TCONS_00016658-exon-sc0000246-1491911889:292422..292522Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:292422..292522TCONS_00016658-exon-sc0000246-1510915933:292422..292522Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:292422..292522TCONS_00016658-exon-sc0000246-1575043694:292422..292522Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:293686..293820TCONS_00016658-exon-sc0000246-1491911889:293686..293820Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:293686..293820TCONS_00016658-exon-sc0000246-1510915933:293686..293820Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:293686..293820TCONS_00016658-exon-sc0000246-1575043694:293686..293820Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:294335..294380TCONS_00016658-exon-sc0000246-1491911889:294335..294380Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:294335..294380TCONS_00016658-exon-sc0000246-1510915933:294335..294380Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:294335..294380TCONS_00016658-exon-sc0000246-1575043694:294335..294380Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:294700..294771TCONS_00016658-exon-sc0000246-1491911889:294700..294771Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:294700..294771TCONS_00016658-exon-sc0000246-1510915933:294700..294771Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:294700..294771TCONS_00016658-exon-sc0000246-1575043694:294700..294771Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:294969..295061TCONS_00016658-exon-sc0000246-1491911889:294969..295061Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:294969..295061TCONS_00016658-exon-sc0000246-1510915933:294969..295061Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:294969..295061TCONS_00016658-exon-sc0000246-1575043694:294969..295061Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:295364..295457TCONS_00016658-exon-sc0000246-1491911889:295364..295457Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:295364..295457TCONS_00016658-exon-sc0000246-1510915933:295364..295457Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:295364..295457TCONS_00016658-exon-sc0000246-1575043694:295364..295457Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:295800..295956TCONS_00016658-exon-sc0000246-1491911889:295800..295956Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:295800..295956TCONS_00016658-exon-sc0000246-1510915933:295800..295956Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:295800..295956TCONS_00016658-exon-sc0000246-1575043694:295800..295956Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:296915..297065TCONS_00016658-exon-sc0000246-1491911889:296915..297065Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:296915..297065TCONS_00016658-exon-sc0000246-1510915933:296915..297065Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:296915..297065TCONS_00016658-exon-sc0000246-1575043694:296915..297065Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:297329..297465TCONS_00016658-exon-sc0000246-1491911889:297329..297465Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:297329..297465TCONS_00016658-exon-sc0000246-1510915933:297329..297465Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:297329..297465TCONS_00016658-exon-sc0000246-1575043694:297329..297465Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1491911889:300170..301367TCONS_00016658-exon-sc0000246-1491911889:300170..301367Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1510915933:300170..301367TCONS_00016658-exon-sc0000246-1510915933:300170..301367Clytia hemisphaericaexon
TCONS_00016658-exon-sc0000246-1575043694:300170..301367TCONS_00016658-exon-sc0000246-1575043694:300170..301367Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:288943..301367 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.04485	4.36561e-10	1.31167e-08	1.00006	24.7592	29.9899	16.4158	16.8865	0	0.390451	0	0	0.38059	0	0	0.716271	86.3009	70.9559	1.09347	0.514571	24.0647	24.1465	8.48494	13.696	41.1564	26.6633	0	0	0.516553	1.18165
Blast
[Close]
BLAST of TCONS_00016658 vs. Swiss-Prot (Human)
Match: SEPT7 (Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2)

HSP 1 Score: 466.077 bits (1198), Expect = 2.839e-155
Identity = 251/394 (63.71%), Postives = 309/394 (78.43%), Query Frame = 3 
Query:  192 KKGLENYVGFANLPNQVFRKSVKKGFQFTLMVVGESGLGKSTLINSLFLTDIYTSTVYEDAAAKFGKTMTVNASTFELKEGGVRLQLTVVDTPGFGDNIDNTDCWNSVIQNIEAKFEDYLNAESRVNRTTVQDTRVHCCLYFIAPTGHGLKPLDVEFMKKLHNKVNIVPVIAKADTLTGDECNRFKQQILKEIEDHQINIYRFPPLSDDESENDLAA--LRRIPFAVVGSNTVLEVGGKKIRGRKYPWGIVEVENIEHCDFIALRNLLIRTHMQDLIDVTNDVHYENFRSERLSVLTGGG--NSITSAALNINPMEQIEREREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNRKFDVTMKTLEQTKKELEDKRRKFEEERNQFDNSQ 1361
            +K LE YVGFANLPNQV+RKSVK+GF+FTLMVVGESGLGKSTLINSLFLTD+Y S  Y   + +  KT+ V  S   +KEGGV+L LT+VDTPGFGD +DN++CW  VI  I++KFEDYLNAESRVNR  + D RV CCLYFIAP+GHGLKPLD+EFMK+LH KVNI+P+IAKADTLT +EC +FK+QI+KEI++H+I IY FP  +DDE EN L      R+P AVVGSNT++EV GK++RGR+YPWG+ EVEN EHCDF  LRN+LIRTHMQDL DVTN+VHYEN+RS +L+ +T  G  N+     L  +P+ Q+E ER +   K+KKME EMEQVFEMKVKEK +KLKDSEAE  R+ +   K LE   KELE+KRR+FE+E+  ++  Q
Sbjct:   24 QKNLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLY-SPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPE-TDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKKMEMEMEQVFEMKVKEKVQKLKDSEAELQRRHEQMKKNLEAQHKELEEKRRQFEDEKANWEAQQ 415
The following BLAST results are available for this feature:
BLAST of TCONS_00016658 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEPT72.839e-15563.71Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2[more]
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