TCONS_00016659 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016659
Unique NameTCONS_00016659
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2210

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016659 ID=TCONS_00016659|Name=TCONS_00016659|organism=Clytia hemisphaerica|type=transcript|length=2210bp
CTGCCAAATTTGGTAAAACTATGACAGTCAACGCGTCGACGTTTGAATTA
AAAGAAGGAGGCGTTCGTCTACAGCTGACGGTGGTGGACACGCCAGGTTT
CGGTGATAATATTGATAATACTGACTGTTGGAATTCGGTGATACAAAATA
TCGAAGCGAAATTCGAAGATTACTTGAATGCAGAATCACGCGTAAACAGG
ACGACCGTACAGGATACGCGTGTTCATTGTTGTTTATATTTCATCGCACC
TACCGGCCATGGGTTGAAGCCATTGGATGtagaatttatgaaaaaattac
aTAATAAAGTCAATATCGTTCCAGTCATCGCAAAAGCAGATACGCTGACA
GGAGATGAATGTAATAGGTTCAAACAACAAattttaaaagaaatcgaAGA
CCACCAGATCAACATTTACAGATTCCCTCCACTTAGTGACGATGAGTCCG
AAAATGACCTCGCTGCACTAAGGCGTATCCCATTCGCAGTGGTTGGAAGC
AATACAGTATTAGAAGTCGGTGGTAAAAAAATCCGCGGACGTAAATATCC
ATGGGGTATCGTCGAAGttGAAAATATCGAACATTGTGATTTCATCGCAC
TGAGGAATTTACTGATCCGAACTCATATGCAAGACTTAATTGACGTCACC
AATGACGTACATTACGAGAACTTCCGCAGCGAACGGTTATCTGTACTTAC
TGGAGGCGGTAACTCCATCACAAGTGCTGCGCTGAACATCAATCCCATGG
AACAGATCGAACGAGAGCGCGAAGATCAAGAGAAAAAACTGAAGAAGATG
GAACAAGAAATGGAACAAGTCTTCGAAATGAAagtcaaagaaaagaaaaa
gaaactcaAAGATTCAGAAGCCGAGTTCAACCGTAAATTTGACGTCACCA
TGAAAACATTGGaacaaacgaaaaaagaattagAAGATAAACGTAGGAAG
TTCGAAGAAGAACGCAACCAGTTCGACAACAGCCAATCAGCACATAACTT
GGATAGTAGCAGAGTCGCCgacaaagataaaaagaaaaaagcaaaaggTG
GATTTTTTTAAAGCGAAATTTTGTTGATAATAATCAAAAATCGACAATAG
ACTTTACCTCGACTCGAGTCCATCGCAGCAGACGTtggaaacattttttg
aaagaatttatATTTTGCATCGTATCCACACATCACTTTTACCAATAAAT
CACGTGATCGGAGCTCGGTAAAATAttatgaaaatgatgacgtcatgttG
ACTAGAAAAGGATTATGGGTCATGGGATATTCTTGGAGGCGATGAAAACG
GTGCATTGTGGGACGTTGACTCGCCCACGTTTCATCGGCCAGTTGTTtat
aatatattattttgatgaatccaattttacaatgaaaaattttagtcctt
ttttcagttttttttttcgtcttttttttttagtgtACCTCTTACAAATT
AGCGGTTTTTATCTCTGAGTCTTTTGAGGATACTGCTTTTCTCAGGGTGa
gaataatttttcattcaGCTTACATTGTTTTCAATTCTTAACAAAaatgc
ctcgttttgaaattattgccatggtgattaactcccagtggattttattG
AAATTACTTCCTACTCATAAAAGAATCCATAAAAGAATTCATAAAATTCa
taaaagaatcatttaattctcaagggacataatcaccattgtaattgttt
gaatacgaggcaagtgatgttcgtgacgtaatttatgaaaaggtcatCAA
GTAGTCCNtgaggcaagtgatgtttgtgacgtaatttatgaaaaggtcat
CAAGTAGtccattttttatttcatattgtTTCTTTAACTTGTTATATACT
AGATTTGTATAGCGAAATTCTTTGATAGGTAGAAACCAACCAATTTTTGT
CATATATCTTGTCATTCTCTATAAGGGAGCAATATTAAATTCTATATGTC
GGACATGTCCGTGAATAGGAATTCATATTTCCCCAAAACTAACAAACTTA
AGTTATGAATATTACAATTTTCATTACCAACAATATTTATAAGATGAACT
CGCAAAATTATTTACCGCGggctttttttttgttattttctatTAGTTAT
TACCCTCTGCTTACTACTTtataatgttttaatttttactgTAACTTTCG
TTTTGAAAAACCGTGAACTTTTTACACCATGAAATAAgtttctgttttct
tttgatgCCT
Run BLAST on NCBI

transcript from alignment at sc0000246:291630..301367+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016659 ID=TCONS_00016659|Name=TCONS_00016659|organism=Clytia hemisphaerica|type=transcript|length=9738bp|location=Sequence derived from alignment at sc0000246:291630..301367+ (Clytia hemisphaerica)
CTGCCAAATTTGGTAAAACTATGACAGTAAGTTGATTTTTAAACCGTTTT
TATTCATATTGTTATCTTTGCGCTCGTGGAAAAGCCAATATTTCATCCGC
TATCCTTATCACTCATGACGTAGTGTTTGATGCAGAAACACCCGGAAAAA
GACAGGGCTTTCAGTTCAGAATTTCAAATATTAAAACTATACTATCAGCA
AGCTCCGGCCAAGTTTTCAGTGTTTTTGCATCAAAGATATGGGATTGCAT
AAACAGACAATGTTAGAGGACTTGAAACATTTTAGCATTACATGAAAGAA
AAGCCTGTATTTAAGGCAGTGGTCAACACATAGTTATAATCTTATTTGTA
TGTCAAAAAAGGGCGGGTAATTCGTTGTATGGGATATACATTATGTCTTC
TATTGATGATTGATACAATCATATTACAACTCGCTAGAGACGAAAATTCT
ATGTTCTAATGTCTAAGTACCAAATGTTTTTTAGACCGTGTAATATCTGT
GTTTAAAACAAAGTCTCTAATTTTTAAACTAAAGAGTCGAATTAAAGATT
TATAGTGTTTAGGGTGTTTAGCACAATTAGAACACAATTTCTCAGAGagt
aaagaaaattaattaatCACGGCTAGTTCTTAAAGTGATGTTCCTTCCGA
CCTAGTGTGCTTTTTGATGTAGACATGACATTATAATGTAACAAAATTAT
CAACGATAAAAACAACGGCCCTAAGGAGTTTCAGTGAAACGTGAATAGTA
TCAACCCCTTTCATTGCAAATTCTTTCCTTGATTATGTTTAGGTCAACGC
GTCGACGTTTGAATTAAAAGAAGGAGGCGTTCGTCTACAGCTGACGGTGG
TGGACACGCCAGGTTTCGGTGATAATATTGATAATACTGACTGGTAAGAT
AGTGGGTTTCTTCATGTCCCTCCTCCCTTTTCAGTCCTTTTTTATGATAT
TTCAAGTGCTATTGGTGTTTCATTGGACGACTTTTTACTACTTAAATACT
GTATgttgttaaaagtttttccgactAAGAACACTGCTAACAATAAAGTC
TTTCTTGAAGATTGAAGTGGGAATACCTAACCTATGATTATTACATTAGT
GCAGTAGACAGATAGTAATGTTGGAACTTTTCTTAAAGTTCGCCTTTCTT
AATTACAACAGACCAACTAAGTTTGCGGCTAAGCGATTGTTAAATTCGCT
GCCTATGACTTTACTTTGCTTTGATAGTCAGGACTTCTAAGTTCATGCCG
GTTTGCAAAAGTCGTTTTCTTGAGTAAAGAAAAactatattatattatat
ttatgtatTTGAAGAGAGAAAATCGATGCTAACTCTTCACTTTACCCTCC
GACACTCACACCCTTCCAACTCTTTAGTCTCAAACGTTGATGCTGATTGA
TCCTTCAATGAATGACGAGAGATATTACATCACAACTGATTAATATTAAA
CcacaaatactttaaaaatgaCTTCAAATTTTAACACATAAAATAGCTTA
CGGCATGCTTATAATTAAAGGGTCTTTTCTCACATCATATTTCTTTGAGG
TCGCTTACCATATAGTATCGGTTTAAGTCTTACATAATGATATTGGTTTG
AGAACAAAATTTCTCCTATATTTGGGTGTGAAGTTCCCCAACAGACGAAA
TAAGATACATAACACAACTCGTTTTTTGTTTGACGAATTTGTAATCTaaa
tatagaaattttatcgataACCATTTGATGGTGAGAAAAAGACTAAgtca
ttttaactttttatagaCTCTATCGATGATTTAAgttctttaaatttttt
cccACTCCACGAGATTTCTTGGCTTGAGTTAATGATGACTTCATCATAAT
CTCTTCCCATGTTCTAGTTCCTACTATTCCTTTTCTTTCTTTGCTAAGAA
AAATCACTgcttttcaaaataacatagTAGCCTGGATCGAGAAAGTTTTA
TCAGCTCTTCAGTGTTTAACCAATTCATAGTTCGAAATTATTTTGGTAGA
ATACTAACAATAACAGTAAACATAATTTCTAGATcctcaaatttttcttc
ttaCAGTTGGAATTCGGTGATACAAAATATCGAAGCGAAATTCGAAGATT
ACTTGAATGCAGAATCACGCGTAAACAGGACGACCGTACAGGATACGCGT
GTTCATTGTTGTTTATATTTCATCGCACCTACCGGCCATGGGTAAGTTCC
AACAAAGTTTGTTTTCATCATGCTTACAATATAAAAGATAATGATGgtaa
aatttttttggattatcttttatattgttttatttcaaattgtcagCTGG
TATTACGCTTACTGTTTGCTCTTTTCTAAACATGATTGTTAACCATGAAC
ATTTCGTCCAGTTCATAGGAAATATACTCTCTTTTCCGTCTTGCGAGGAA
GTGGATATTAAATTACTGAACTTAGCTTTACACTTAGTGTTTTGAGCTCT
CTGGTGACAACAGAgcagtctatgctcgcttacccgagcagcactgatga
gtcctgggaaggacgaaacacgtgtctgcggatagatATATTACTGAACT
GAATGTTGACACTCGCAAAACTGGTTGCAGATCAGCAAGACGTCTTGTGC
TAAAAAAACTTTCTGCTTAGATGTTTGTACATCTCTTTGATGTAGCAAAA
CGTCCGATGTGTCCAGTCAGATTGTCATTCAATtaaccttcgcatttctt
ttcAGGTTGAAGCCATTGGATGtagaatttatgaaaaaattacaTAATAA
AGTAAGTATACTATGTTTACATCAATCTTGAGAAGGTTGGAAAAATTATG
TCAGGGGGGTTTTTAAATTACTTATATTCGTTTTCAAAATGAGTTGCTTG
ACTTGACCACCATCATTCTCCACATTCTTTCGAACCAATAATATTTTCTG
GAatttcatgtttcaataaacCAACCAATATCTGAAGAAATTCACCCACT
TTTACCATACTGTACAGTGTGTATCACTCTAATCACACGATTCATCTGAG
CACTCTTCTTCATACCATTGCTTTTCATTTGGGCACTCTTACCTGACATC
AACGCTCTTTTTCTATTCAGGTCAATATCGTTCCAGTCATCGCAAAAGCA
GATACGCTGACAGGAGATGAATGTAATAGGTTCAAACAACAAGTAAGTGG
TCCTCATAACAACTCATTTCGACCATAAATCTACTCCTAACCCTTATTCG
AATACTTTCTGTGTCTATTCTTGTGTGAGCCAACGGTTCTTATGATATAA
CACATGGTTCTTTCTGTCTTTCTAAGCCAGACGCTTGCTTCTTAAACTGG
TACTGTATATAATTTTGTTCtactttttaccttttttagattttaaaaga
aatcgaAGACCACCAGATCAACATTTACAGATTCCCTCCACTTAGTGACG
ATGAGTCCGAAAATGACCTCGCTGCACTAAGGGTAAATATAATGGTCATC
ACTATTCACTGCTTATGATATTATTCTCATCTTTTGTGTAAATGATCCCg
tctttttcttaatatttcagGACTTTAAAATCTGATTTCCTTTGTCATGG
GTCAACTGCCGATCATcgaaatttgaataagattttCACTGTCATTTCAT
ACTCAAAATACATTATTCCTACGAACCATCTTTGCAAAGATCTTCAACAG
AATAGGCAAATGTCTATTATAGTCACGACTTTCCCTTCCAATCAACTAAA
TAGCTCCCATTTTTATGTATCTCTTTTCTTGCAGCGTATCCCATTCGCAG
TGGTTGGAAGCAATACAGTATTAGAAGTCGGTGGTAAAAAAATCCGCGGA
CGTAAATATCCATGGGGTATCGTCGAAGGTAAGTGATATCTTTGATCAGG
TGAATATTTTGTTTCAATTACTTGTTTGCTGAGCAAAAGAACTGGCATAA
CTACCTTATTTATCCAATTTAGATGTTCATGCTTTTAGCAATCGTgagat
gttttttatttttgtttaatttaaatATGCCATTATAATACTTGAGCTTG
TAGAGTCTCAAAGGTAATACTGAAACAGTATAAATGGCTACCACNCAATG
TCGTTATAATACTTGATTAACGAGCTTGCAAAGTCTCAAAGGTAATACCG
AAACAGTATAAATGGCTACCACCGCTATGGCTGCTAAAGTTTTGAAcgtt
tttatttcatttcatttcagttGAAAATATCGAACATTGTGATTTCATCG
CACTGAGGAATTTACTGATCCGAACTCATATGCAAGACTTAATTGACGTC
ACCAATGACGTACATTACGAGAACTTCCGCAGCGAACGGTTATCTGTACT
TACTGGAGGCGGTAACTCCATCACAAGGTATGCAGTAGCATAGAACTTCG
TGTCACTTCAATCCAACCATAGTATAGATCAGTTCAGTGAATTTAAGAAG
TTTTCCTtatcatagtttgcacccccccctttttaatagggggggatgcc
aactttctggagggcctttgtagggggggtaccgagatctaccgaaaaaa
ctaggggggatgggaatgtaggggggggggggcaaataaNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtcggtccttttgcccagctgcccccccccccgggagtcaAATTCTT
CTTAACTCGAGCCTCTTCATACGTAAAGTAAAATTCATTTGCTAATTTTC
ATTACCTATCTATAACGCAACTTTTCTCTTTCAAGTGCTGCGCTGAACAT
CAATCCCATGGAACAGATCGAACGAGAGCGCGAAGATCAAGAGAAAAAAC
TGAAGAAGATGGAACAAGAAATGGAACAAGTCTTCGAAATGAAagtcaaa
gaaaagaaaaagaaactcaAAGATTCAGAAGCCGAGGTAAGACAATGTTT
TTGCAGTCATTTTTTTATAGTAGATGCTCTTTGTTTCTGAAAATAGTTTT
TCTTATATGTAATGAAACTCTCTTGGCGTTTTTTATACCTTCCACGATTT
AAAGTTCTTCAAACAGCCCTAGTTGCCTACCAAAAGAAACGTGATGATAA
ATAAAGATGTTAGAGATAGAAATGAGCAAATTAAACAAGATCTTGATGGT
TAATGAATGATTATTTGAAATCCATTTCTTTTTTCACTCCTGTTTTCAGT
TCAACCGTAAATTTGACGTCACCATGAAAACATTGGaacaaacgaaaaaa
gaattagAAGATAAACGTAGGAAGTTCGAAGAAGAACGCAACCAGTTCGA
CAACAGCCAATCAGCACATAACTTGGATAGTAGCAGGTCCAGTAGTAGAT
CTTCTTTGCAGAAGTAAGTGAGATGACTGTCTGAGTGGTCTGGTTACCCC
CTGTATCGTACGATTTCGATTGTTGTTGCGCATGCGCTATGTTTGCTTAT
TCATAAAAACCGTACCATAGTTTAGTGGGTAAACAAATATATCAACGCGA
TTTTAGCTGCAATCGaaattgtaaataaaaaaacaacaatgctTTGTAGC
TTTAACTTTACACTAGCTCTAAAAAAATCACGTACGAGTCTTGACTTAGA
GGAATGTACTAGAACGAGACTTCCAgacaaatgattttaaaatccAGTAG
ATGGCAAACGATAGTCTCATTCGATAAACGTTTCTTCTTCCCGAGAGCGA
atatatttcttttgaaagtcTCTTTCCGAAGAGAAAGCTACAAAACAGGG
GTAACCAGCGGGAGAACAAAATGCTTTTCCATAGCACTCCACTGCACAAA
ATATAATCAACAACACACAAATACtaacaaaacaacaacaacaaaatatc
TCACAAACACTCCATCATTAAAAACATACAATCCATTCATACATGCGTAT
ATGTGCACGTACTAGAATTGATACCCATGAAGTGGTCTTTCAAGTCGGCA
GATCCTGAACAGTCTTTTACTGGGCTACAAATTATCTCACGATTCATTAA
GCTTTTTCTGAAACGTTTAAACCTGTGTTTATTTACCTCCCATCATACTA
CGATGTAAAGGTAGAGAACACCTTTGATAAACCCCGTTTAGAACAAATTT
TTAACTGCGTTACTTCAAAAACGACACAAGCTTTAGCTTCATAAATGTAG
TCTATTAAAAGGACTATTTAAAGTAAAGTTCAGCCGAATTTCTGAGGCAA
TCTTAAGACGAAAGATCACTTCATTGTGCCACGAGTAAATCTcagaagtg
ttttttttttcattttattttttatgtttcttcGTATTTCTAGAGAAAGT
GTCGTTGATTCGTACGACCAACCATCAAACACATGCGAACATTTTCCCAT
GCCAGGCATGTATGTTTCAAAAACAccatcaaaaactaaaaaagattaac
aaaaaaagctaaacaaAATCATAACCAATTTCTTTCATGGTATCTTTTct
tgcaaaaataaaatctaacaTCGCATGCGCACTTTTTTTCTAATACACGA
GATTTTTGCATGAAATATTGGTGGTAGTTGCTGTCCAAGacagttttaaa
gctatttctgGAAAGACTCTAAAACTGACAATTTTCTCTTGGACAACAAC
AGAACTGATCAGCCAATCAAATTATTATGCACGATTATGCACTACCTGCA
CGTAATTTTTAATTGCATTTTGTTCTCTTGAGTATGTTCATTAGAAAAAG
GAGTTTGACAAGTTATCCGtgatatttatgacgtaatgtttagaAGCACT
CAAACAAGACTTGATGTTTCccaataattttgaatttaaaagattacgtc
atgaatatcacaaATATCAGGCACAAGATTTAGTACCTTGGAATTTAAGA
AAATGTTGGTACCTCGTATCGAATCTGCCGATAATAGAGATCTCGAACTA
TTTGCCAACGTCGGCATTTGCCGATAAGAGAGACCCCGACCTATTTACCA
GAGGTTTTTTCTTTAAGTTTATTGAAAGTAAGATTTTGAACTAGATTTCA
TTAAATAGCACAGTTGAATAATAAGAATATACGTAAAGAATGCTTTTCat
aattatacatttttcaactcaaagtaaACACGTATCACTTATGTCTGATA
TCTTTCATAAAATAAAGCCAAATGTGATGGTAAACTTTGTGGTCGCTTTT
GTCGGCATATGCCTACATCTGGCAAATGggtcgaaccttcttttttttcc
gtggcaaataggtcgaaccttaaaaaatacggacggcagttaaagggtta
aagggataatcagatggtttgtaatattcTCTGCATGGGTATTCCCTTAA
AAGTTCTGAGCAAGACCTCCAAATCTTTTTGTGTAATAGcccttttttag
agatttcaaattgtcATAACTCAACGTTGGAAATTTGCTAGCTAAAAATA
TTTGGAGGTTTTACTCGGGAACATTTGAGTTTCTGTAGGCCAAATATCTC
TCTGATTATCCTTTTAAATCTCTTAGTTCGTTCTATTAATTAAAGTGACT
GGGTTATCCTTATTCTGTAAAACTCCTTTTTCGTGTAGGTGTGTCGAGTA
GAGTGATCGACagattaatttttattttattgcatGATTATTTCGATTGA
AATTCATGACATGTGCCAATGTGACTTTCATCGGATTAGATTATGCGAGA
TTTAATTTTACGATTCATTTCTGCAAATCAGCGTCTTTAAATATTTTGCG
TTGACCTAATGGCGAAAATCATTTGTAAATGGCCCTGACAAATTCAGAGG
GTCTTTTTAGCCGGAAACCTTATCTTAAAGCTTTTCGTGAATATAATATC
GCGAGTCGGTGATCTTATGCGATTTCGCTAATCTTATTTTCACGAAAAAG
GTAAAAATTCGCGGAAATAAATTAAATCTTGCTAAAATTATTCCGGCTAA
AGTACGTCATTCAGCCCCCTGAATTAGTTTTCCGATAGGAGAAATGATAT
AATATGGCTGGTGAATTTCAGAAGTAATAGACTAGTTAGAATTAACCGGA
acgtttttttgaaattgttttgttatttGTCTCTCTACAGAGTCGCCgac
aaagataaaaagaaaaaagcaaaaggTGGATTTTTTTAAAGCGAAATTTT
GTTGATAATAATCAAAAATCGACAATAGACTTTACCTCGACTCGAGTCCA
TCGCAGCAGACGTtggaaacattttttgaaagaatttatATTTTGCATCG
TATCCACACATCACTTTTACCAATAAATCACGTGATCGGAGCTCGGTAAA
ATAttatgaaaatgatgacgtcatgttGACTAGAAAAGGATTATGGGTCA
TGGGATATTCTTGGAGGCGATGAAAACGGTGCATTGTGGGACGTTGACTC
GCCCACGTTTCATCGGCCAGTTGTTtataatatattattttgatgaatcc
aattttacaatgaaaaattttagtccttttttcagttttttttttcgtct
tttttttttagtgtACCTCTTACAAATTAGCGGTTTTTATCTCTGAGTCT
TTTGAGGATACTGCTTTTCTCAGGGTGagaataatttttcattcaGCTTA
CATTGTTTTCAATTCTTAACAAAaatgcctcgttttgaaattattgccat
ggtgattaactcccagtggattttattGAAATTACTTCCTACTCATAAAA
GAATCCATAAAAGAATTCATAAAATTCataaaagaatcatttaattctca
agggacataatcaccattgtaattgtttgaatacgaggcaagtgatgttc
gtgacgtaatttatgaaaaggtcatCAAGTAGTCCNtgaggcaagtgatg
tttgtgacgtaatttatgaaaaggtcatCAAGTAGtccattttttatttc
atattgtTTCTTTAACTTGTTATATACTAGATTTGTATAGCGAAATTCTT
TGATAGGTAGAAACCAACCAATTTTTGTCATATATCTTGTCATTCTCTAT
AAGGGAGCAATATTAAATTCTATATGTCGGACATGTCCGTGAATAGGAAT
TCATATTTCCCCAAAACTAACAAACTTAAGTTATGAATATTACAATTTTC
ATTACCAACAATATTTATAAGATGAACTCGCAAAATTATTTACCGCGggc
tttttttttgttattttctatTAGTTATTACCCTCTGCTTACTACTTtat
aatgttttaatttttactgTAACTTTCGTTTTGAAAAACCGTGAACTTTT
TACACCATGAAATAAgtttctgttttcttttgatgCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009313XLOC_009313Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016659-exon-sc0000246-1491911889:291630..291655TCONS_00016659-exon-sc0000246-1491911889:291630..291655Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:291630..291655TCONS_00016659-exon-sc0000246-1510915933:291630..291655Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:291630..291655TCONS_00016659-exon-sc0000246-1575043694:291630..291655Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:292422..292522TCONS_00016659-exon-sc0000246-1491911889:292422..292522Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:292422..292522TCONS_00016659-exon-sc0000246-1510915933:292422..292522Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:292422..292522TCONS_00016659-exon-sc0000246-1575043694:292422..292522Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:293686..293820TCONS_00016659-exon-sc0000246-1491911889:293686..293820Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:293686..293820TCONS_00016659-exon-sc0000246-1510915933:293686..293820Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:293686..293820TCONS_00016659-exon-sc0000246-1575043694:293686..293820Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:294335..294380TCONS_00016659-exon-sc0000246-1491911889:294335..294380Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:294335..294380TCONS_00016659-exon-sc0000246-1510915933:294335..294380Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:294335..294380TCONS_00016659-exon-sc0000246-1575043694:294335..294380Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:294700..294771TCONS_00016659-exon-sc0000246-1491911889:294700..294771Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:294700..294771TCONS_00016659-exon-sc0000246-1510915933:294700..294771Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:294700..294771TCONS_00016659-exon-sc0000246-1575043694:294700..294771Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:294969..295061TCONS_00016659-exon-sc0000246-1491911889:294969..295061Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:294969..295061TCONS_00016659-exon-sc0000246-1510915933:294969..295061Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:294969..295061TCONS_00016659-exon-sc0000246-1575043694:294969..295061Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:295364..295457TCONS_00016659-exon-sc0000246-1491911889:295364..295457Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:295364..295457TCONS_00016659-exon-sc0000246-1510915933:295364..295457Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:295364..295457TCONS_00016659-exon-sc0000246-1575043694:295364..295457Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:295800..295956TCONS_00016659-exon-sc0000246-1491911889:295800..295956Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:295800..295956TCONS_00016659-exon-sc0000246-1510915933:295800..295956Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:295800..295956TCONS_00016659-exon-sc0000246-1575043694:295800..295956Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:296915..297065TCONS_00016659-exon-sc0000246-1491911889:296915..297065Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:296915..297065TCONS_00016659-exon-sc0000246-1510915933:296915..297065Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:296915..297065TCONS_00016659-exon-sc0000246-1575043694:296915..297065Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:297329..297465TCONS_00016659-exon-sc0000246-1491911889:297329..297465Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:297329..297465TCONS_00016659-exon-sc0000246-1510915933:297329..297465Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:297329..297465TCONS_00016659-exon-sc0000246-1575043694:297329..297465Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1491911889:300170..301367TCONS_00016659-exon-sc0000246-1491911889:300170..301367Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1510915933:300170..301367TCONS_00016659-exon-sc0000246-1510915933:300170..301367Clytia hemisphaericaexon
TCONS_00016659-exon-sc0000246-1575043694:300170..301367TCONS_00016659-exon-sc0000246-1575043694:300170..301367Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:291630..301367 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.22162	1.8491e-05	5.93956	11.3112	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.00168601	0.000333375	0.886162	0	0	0	3.20119	2.2258	1.36742	12.6627
Blast
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BLAST of TCONS_00016659 vs. Swiss-Prot (Human)
Match: SEPT7 (Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2)

HSP 1 Score: 368.622 bits (945), Expect = 4.266e-119
Identity = 203/331 (61.33%), Postives = 255/331 (77.04%), Query Frame = 3 
Query:    6 KFGKTMTVNASTFELKEGGVRLQLTVVDTPGFGDNIDNTDCWNSVIQNIEAKFEDYLNAESRVNRTTVQDTRVHCCLYFIAPTGHGLKPLDVEFMKKLHNKVNIVPVIAKADTLTGDECNRFKQQILKEIEDHQINIYRFPPLSDDESENDLAA--LRRIPFAVVGSNTVLEVGGKKIRGRKYPWGIVEVENIEHCDFIALRNLLIRTHMQDLIDVTNDVHYENFRSERLSVLTGGG--NSITSAALNINPMEQIEREREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNRKFDVTMKTLEQTKKELEDKRRKFEEERNQFDNSQ 986
            +  KT+ V  S   +KEGGV+L LT+VDTPGFGD +DN++CW  VI  I++KFEDYLNAESRVNR  + D RV CCLYFIAP+GHGLKPLD+EFMK+LH KVNI+P+IAKADTLT +EC +FK+QI+KEI++H+I IY FP  +DDE EN L      R+P AVVGSNT++EV GK++RGR+YPWG+ EVEN EHCDF  LRN+LIRTHMQDL DVTN+VHYEN+RS +L+ +T  G  N+     L  +P+ Q+E ER +   K+KKME EMEQVFEMKVKEK +KLKDSEAE  R+ +   K LE   KELE+KRR+FE+E+  ++  Q
Sbjct:   86 RIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPE-TDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKKMEMEMEQVFEMKVKEKVQKLKDSEAELQRRHEQMKKNLEAQHKELEEKRRQFEDEKANWEAQQ 415
The following BLAST results are available for this feature:
BLAST of TCONS_00016659 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SEPT74.266e-11961.33Septin-7 OS=Homo sapiens GN=SEPT7 PE=1 SV=2[more]
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