TCONS_00016664 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016664
Unique NameTCONS_00016664
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3511

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016664 ID=TCONS_00016664|Name=TCONS_00016664|organism=Clytia hemisphaerica|type=transcript|length=3511bp
TAAATATCTATAATTTTCTACCTTTCTCTTTACAGGTCGTCTATAAAAAA
ATAagtcaaaagaaaagaataaagaaaaaacaaaatgattttaaacaaaa
aatgcaTGGAAATTGTCAACACGGTGATAAATGCTGGGAATTGTAATCAT
CTGTCAAGACTTGACTGCATGCAATTGGTTGATCAAAAGACCATTGACTC
GGTAATTTTGCCCATATTGCTGTTCTGGGATCCATTAGAACAGCCATGTA
AAACATTTATTTGTCCATTGTGCCATCAAGATGGAAATCCAAATTCAAGA
TTGCACAGACcacaaactttgtttgatagtTGGGAAGctggaagttcaaa
ttcaatGATGCCACGAAAGATATGGGATGTAAACTGGTTCATTGCTTTGG
TGGGTAGACGATATCATCGTATGAACTCACATTCAGTTAGCTCGTATCAC
GCTGGTATACTTCGTCAAATGAATCCAGCTGAGGTCCCGTTTATTTTGAG
CCACGATAGTGGACTGACAATGGAGGCATTTGATTTGGTAAATCGGCTTG
TTGATCATGGTAATTCCTTTTCAGTAACGCAAAAGATTTTTACGGAGGGT
ATCATTGACAAATATCACCGTAGAAATGCATTTTTCTTGCCAAATAAATA
TGAATTTAATGAAATCACCGATGAAGCTATAACGCGGCCACCATCTGAAC
AGTTTTTGCGTGGTTGCTTTTTATACAACTACAACATGTATAAAAAAGTT
TATAACGAAAAAATGCAAAGTATCAACTGTGAGTATCTTAGTTGTGACCA
CACGTTTAAAGTTGCGACTAACATCGGATACCTTGACCAAAACAAAAAGT
GGGTTAAAGTTGTCGACTCCTTATTTCTATTTATGAATGAGAAAGGACAA
ATTCTGGGATACAAGATGTGCAAAGGAACATCATTCAATCttgttgaaga
tattttcaaagACTTATCCGTCCGTAACCCACACATCACGCACATATACT
TGGATAACTGTTGCACGTGGAAACATAAACTCGCAGAAGTTTTCCCGAAT
GCTATaGTGAAATTAGATTTGTTTCACGCAGTGCAGCGGTTGGTAAAAAC
AATCAGTAAACGGCACCCTTACTGTCAGGACATGTGCAAAGAGTTGACAC
TCGTCTTTCGAGACATCAATGATACTGGTGATGAACGATCAAAGCCAACC
CCACCACcaaatcaaattataaaaaacatggaGACATTCCTCACAACCTG
GGAGAATGTCGAATTCAAAGGCTGGAAAGTCTTGACCAGCAAGTTCCTAA
AACAGTGGGATAATTTAAAAGTGCATGTCGATCTTGGATGTTTATCTGGT
ATTCCTGTAGGCCACGGAACCAACAAGAACGAAAACCTTCACCGGCAAAT
GCGGATCTTATTGCCAAGAAATAGACTTGGTGTCGACACAGCGGAGGCAC
TTTTTAACTCGCTATTTTATTATCACAACGAgagaaagaaaacgaaaata
gGCACAAAGGGACAACAAGTCAATATCAAACACGTCTGGCCTATCTGGCA
ATTTGCTAAAGAAGATCATCATTTCGGGATTTCCGATGCTCCTGTCAATA
ACAACATCGACTTCGACGAACCGTTTCTTATCGATTCACTCTACATGCAT
GACGATGAAGACATACCATGTGAACATGCCGATCATAGCGGTTACAATGT
AAAAGAGTCTATTTCTGGGAGAACGAGACGAATCATCGCCATTGCGAAAC
AATTCAAGGAAATTCAAGCGAAGATGAATTCCGACCTGCTCTACCGCCTC
TTTGGTACCAATGGTTTCGCCTCTTTACCTGCAGATGTATGGCAACCCAT
GGAATATCTGCAGGCTCAGGAAATAGATAACAATTTTCCAATCGATTCAA
TCATGCAAACGCTAGGTCTTGCTCAAATGAGACATTCTGGTCCTTTTGTT
GATACTATTGCACAGCAGCTATCAGATATGCTTCGGTATACTGATGTCAG
CTCGAAATACCAATCATTTCTTGAGAGGAGTGGTATAAGAAAAGATAGTC
CAACCGAAACCATCATTTCTAACCTTTTTTCAATCATCGAAGATGAGCTA
CAGTTCAATGAAGATGATTATGAGGTGTATTGCGAAGACAAAACACAATC
ACATCCAGAAGCTTTAGCAAATTCACTTGGAATCATGATCGTTTTGGTAC
CAGCTTGCTTTGGTATGCCGTTTTTGCCAATTGCCCCGAGGCAAGGCCTA
GCCATACAAAACACGTTTTACGTATGGTGTGGGCCAAACAAAACCCAATT
TACATCATTGATAAGTATGGTAACCGGTCCAACTAAAACAAGCTGTAGGT
GCGGAAGGAGGAGCAAGAAAGAGGATTCATCCCATTGTCAATACAATGAC
AACTGTTCATGCTTAACGAGAGGCATTAAATGTGGCAAATCTTGTTTCTG
CAAAAGATGCCAAAATGGGAGACCTGAAACTTTCTCCTCTaaacgaagaa
gaagaatccAACCATGCCTCAGTCAAACGTCGACCCTAACGTCTTTCAGT
GCTGCTAATGAGTCTAGCAACATCATTTCAAACCGGATGAGTGAGGTAGA
ATCTCTTTTGCTAGAAGCAATATTGTTTGTTCTCATTCGAGATTTCGAGA
TCGATTTTGTGGGTAAGTTTGATGAGAACCACCTCACTTGCCTCATTGTT
GAGGAATACGATACAGTTTGGAAATGTATCTCAACAAAAAACGATTTCGA
CATTTCTAAACAACAATTAACAACCGAACTTGTTAAAAAATGGTTAAAGC
ATCGAAAGTTTCGTCTCTTGTTGGAGAAAGAGAAAAGGAAGTCAAAAGAA
AACGTTTAGAATACGAAAATACGTCCTATAACTGCACGATTGAAAGTACA
CTGAAAACTATGAATATTTTGGAAGCGAACCTTGGGCAcatatttaatta
tttttaatatcGATTATCGCTGTAACTCAAACTATTTTAGGTAAATACAC
GACCTTCTCATAGCGAACCAGTAGGATTTTCTcagccaatggggataaaa
ataacggactgaaactcgatggggattatCTTTCATGGctagggatttga
attccattgtttcaTAGTCAGGAAATTCAGTgacattttgcagtgaggat
tatCTGATTATCTTCAGTGGGGCAAAAATTagaatataattttccaccag
ggACAATATTTTGAGCAATATTTCCAATGGGAAGGGGTCCCtgtaggtct
gtgagaagggccGGTGTttaaatatttctatttttccaAGTAGAATGCAT
TTTCAAACTATGAATTTTTCATATCCAAAAGCTTTTTTAGCGAATGgaga
aatattcaaaacattCCATAAAACTGTGCTATTTTTAATAAATTACTTAA
AGCCTTATACTAAAAGGAGAACCCAATCTTTAAGGGCCCGACCGGAACTT
TACTTACCTTTCTATTTTTCATCTACAAGGTGTCCTCAAAAATGATGCCT
TAAGGGAAAAA
Run BLAST on NCBI

protein sequence of TCONS_00016664-protein

>TCONS_00016664-protein ID=TCONS_00016664-protein|Name=TCONS_00016664-protein|organism=Clytia hemisphaerica|type=polypeptide|length=924bp
MILNKKCMEIVNTVINAGNCNHLSRLDCMQLVDQKTIDSVILPILLFWDP
LEQPCKTFICPLCHQDGNPNSRLHRPQTLFDSWEAGSSNSMMPRKIWDVN
WFIALVGRRYHRMNSHSVSSYHAGILRQMNPAEVPFILSHDSGLTMEAFD
LVNRLVDHGNSFSVTQKIFTEGIIDKYHRRNAFFLPNKYEFNEITDEAIT
RPPSEQFLRGCFLYNYNMYKKVYNEKMQSINCEYLSCDHTFKVATNIGYL
DQNKKWVKVVDSLFLFMNEKGQILGYKMCKGTSFNLVEDIFKDLSVRNPH
ITHIYLDNCCTWKHKLAEVFPNAIVKLDLFHAVQRLVKTISKRHPYCQDM
CKELTLVFRDINDTGDERSKPTPPPNQIIKNMETFLTTWENVEFKGWKVL
TSKFLKQWDNLKVHVDLGCLSGIPVGHGTNKNENLHRQMRILLPRNRLGV
DTAEALFNSLFYYHNERKKTKIGTKGQQVNIKHVWPIWQFAKEDHHFGIS
DAPVNNNIDFDEPFLIDSLYMHDDEDIPCEHADHSGYNVKESISGRTRRI
IAIAKQFKEIQAKMNSDLLYRLFGTNGFASLPADVWQPMEYLQAQEIDNN
FPIDSIMQTLGLAQMRHSGPFVDTIAQQLSDMLRYTDVSSKYQSFLERSG
IRKDSPTETIISNLFSIIEDELQFNEDDYEVYCEDKTQSHPEALANSLGI
MIVLVPACFGMPFLPIAPRQGLAIQNTFYVWCGPNKTQFTSLISMVTGPT
KTSCRCGRRSKKEDSSHCQYNDNCSCLTRGIKCGKSCFCKRCQNGRPETF
SSKRRRRIQPCLSQTSTLTSFSAANESSNIISNRMSEVESLLLEAILFVL
IRDFEIDFVGKFDENHLTCLIVEEYDTVWKCISTKNDFDISKQQLTTELV
KKWLKHRKFRLLLEKEKRKSKENV
Run BLAST on NCBI

transcript from alignment at sc0000246:345780..350910+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016664 ID=TCONS_00016664|Name=TCONS_00016664|organism=Clytia hemisphaerica|type=transcript|length=5131bp|location=Sequence derived from alignment at sc0000246:345780..350910+ (Clytia hemisphaerica)
TAAATATCTATAATTTTCTACCTTTCTCTTTACAGGTCGTCTATAAAAAA ATAagtcaaaagaaaagaataaagaaaaaacaaaatgattttaaacaaaa aatgcaTGGAAATTGTCAACACGGTGATAAATGCTGGGAATTGTAATCAT CTGTCAAGACTTGACTGCATGCAATTGGTTGATCAAAAGACCATTGACTC GGTAATTTTGCCCATATTGCTGTTCTGGGATCCATTAGAACAGCCATGTA AAACATTTATTTGTCCATTGTGCCATCAAGATGGAAATCCAAATTCAAGA TTGCACAGACcacaaactttgtttgatagtTGGGAAGctggaagttcaaa ttcaatGATGCCACGAAAGATATGGGATGTAAACTGGTTCATTGCTTTGG TGGGTAGACGATATCATCGTATGAACTCACATTCAGTTAGCTCGTATCAC GCTGGTATACTTCGTCAAATGAATCCAGCTGAGGTCCCGTTTATTTTGAG CCACGATAGTGGACTGACAATGGAGGCATTTGATTTGGTAAATCGGCTTG TTGATCATGGTAATTCCTTTTCAGTAACGCAAAAGATTTTTACGGAGGGT ATCATTGACAAATATCACCGTAGAAATGCATTTTTCTTGCCAAATAAATA TGAATTTAATGAAATCACCGATGAAGCTATAACGCGGCCACCATCTGAAC AGTTTTTGCGTGGTTGCTTTTTATACAACTACAACATGTATAAAAAAGTT TATAACGAAAAAATGCAAAGTATCAACTGTGAGTATCTTAGTTGTGACCA CACGTTTAAAGTTGCGACTAACATCGGATACCTTGACCAAAACAAAAAGT GGGTTAAAGTTGTCGACTCCTTATTTCTATTTATGAATGAGAAAGGACAA ATTCTGGGATACAAGATGTGCAAAGGAACATCATTCAATCttgttgaaga tattttcaaagACTTATCCGTCCGTAACCCACACATCACGCACATATACT TGGATAACTGTTGCACGTGGAAACATAAACTCGCAGAAGTTTTCCCGAAT GCTATagtaagattttttttgtttttgtaaactCTTTTTGTCCTTATTCT AATTATCTAGGGAATTGACAACCTCGTCTCCATGCCTAATCTCTTTTTTT GATTCAGGAGGAGATTAATACAGAAGCAGCCAGGGGAGAGATTTGTggct attacagaaaagttgttaCTCCATCTAACTTTTATTACCTAGCAAATCTA CCAATGAGAAGCcataagcaaaatcaattaacatgctataatagatctcg tgaacctacaaagaactgtaatagACCAGttattcatccatcataaatct ttttctttgactttaatGGATTAAATTAAGGaaactttccagtgtgaacg cgcccCATGATTTTGATTTGATGGTAAAACAATACTTTTATTAGAGCTTT TATTAGTGAGAAGGCACTCCTTGAATAGTGTATATCAACGTGAATTCGTT GTATTTTGAACCGTTTGGTAATTTAAGTTCATTATTAAAACATGTCAAGC GCTTCAAAACCTACGCCAATCCGCAATTATAACTTTCGCTTGAACGTTTC ACGTACATCAGCAGTAATAAAAACCTTTTCTTTCTAGACTTTCATCATTa ttaacaaaacatttttagaatttaGGCACGTTAGACCATTAGCATGAAAC TTTCAGTCAACCTTGTGCTCGTGTATCACAGGCTTTATTTGcactactga tggacgccagagaatatatACAGCGCTATATAGTAAAGCacaaaaaagct gataatgcgcaggaAACAAGGTTGACTTTTAATTTGAATACAtcctaaat ttaaaaaatgacgtcgCTTCAAACTAATATGAATACGCAAATTCGAAAAA TGCTAATCTTCTTTCTTTTAGGTGAAATTAGATTTGTTTCACGCAGTGCA GCGGTTGGTAAAAACAATCAGTAAACGGCACCCTTACTGTCAGGACATGT GCAAAGAGTTGACACTCGTCTTTCGAGACATCAATGATACTGGTGATGAA CGATCAAAGCCAACCCCACCACcaaatcaaattataaaaaacatggaGAC ATTCCTCACAACCTGGGAGAATGTCGAATTCAAAGGCTGGAAAGTCTTGA CCAGCAAGTTCCTAAAACAGTGGGATAATTTAAAAGTGCATGTCGATCTT GGATGTTTATCTGGTATTCCTGTAGGTATGTAAATTGCCACCCCTGCCTC AGCTACCCGGTGGTGTTTTGAAGCCCAACGAGGTGATTGTCTTCGTAAAG AGGGAGGAGACACTCATATCTTCAAGCAAGAAACAGTACACAATATGGGG GCATGTGTATTTTACTTAAaaacatctactttataagaatcaaaggcATA ACCCTTGAAAGACTGCCATAAACCGTTCGGTAACtatttcttacaaagta aacgaGGAACAgcttataagcaactactttgTAAGAATCCACGCGTAAAC TCTTAAGGCTATTAAAAGTAGGCTATTTTTGAAAACACCTGCTCTAGAAG AGAGGGAGTTGTTCTTCCGATTCTATGATATTTATCGGTGCTTTATAAGT GCTTTTCACGGAAGGCAGATCCTTTCTGGGCCCCAGCAGTTTTATTGTTC AAACCATTTGAGCGGAGGTCACTTATTAGGTTAGTTCAgaggttttattt tttctttttattttgaatcacAGGCCACGGAACCAACAAGAACGAAAACC TTCACCGGCAAATGCGGATCTTATTGCCAAGAAATAGACTTGGTGTCGAC ACAGCGGAGGCACTTTTTAACTCGCTATTTTATTATCACAACGAgagaaa gaaaacgaaaatagGCACAAAGGGACAACAAGTCAATATCAAACACGTCT GGCCTATCTGGCAATTTGCTAAAGAAGATCATCATTTCGGGATTTCCGAT GCTCCTGTCAATAACAACATCGACTTCGACGAACCGTTTCTTATCGATTC ACTCTACATGCATGACGATGAAGACATACCATGTGAACATGCCGATCATA GCGGTTACAATGTAAAAGAGTCTATTTGTAAGTATACTATGAAAAttcct tgagtgccccccccccccGGTCGTAAGAGGTAGATATACTTTATTTGCTT TATATTTATTGCATATTAACACAAGAAAAATAAAGAAGCACAACATGTGT ACTTTTGTATCTGTTTTATAATCTTCTCTTTTTTCGGAAATCCTGTAGAG TCGATTAGGGAATTAAGGAAATGTTAACTATTGTTTAATTTTTTAGAATG CAAATTTATAATCAATTATTTATTTTCCTTATAGCTGGGAGAACGAGACG AATCATCGCCATTGCGAAACAATTCAAGGAAATTCAAGCGAAGATGAATT CCGACCTGCTCTACCGCCTCTTTGGTACCAATGGTTTCGCCTCTTTACCT GCAGATGTATGGCAACCCATGGAATATCTGCAGGCTCAGGAAATAGATAA CAATTTTCCAATCGATTCAATCATGCAAACGCTAGGTCTTGCTCAAATGA GACATTCTGGTCCTTTTGTTGATACTATTGCACAGCAGCTATCAGATATG CTTCGGTATACTGATGTCAGCTCGAAATACCAATCATTTCTTGAGAGGAG TGGTATAAGAAAAGATAGTCCAACCGAAACCATCATTTCTAACCTTTTTT CAATCATCGAAGATGAGCTACAGTTCAATGAAGATGATTATGAGGTGTAT TGCGAAGACAAAACACAATCACATCCAGAAGCTTTAGCAAATTCACTTGG AATCATGATCGTTTTGGTACCAGCTTGCTTTGGTATGCCGTTTTTGCCAA TTGCCCCGAGGCAAGGCCTAGCCATACAAAACACGTTTTACGTATGGTGT GGGCCAAACAAAACCCAATTTACATCATTGATAAGTATGGTAACCGGTCC AACTAAAACAAGCTGTAGGTGCGGAAGGAGGAGCAAGAAAGAGGATTCAT CCCATTGTCAATACAATGACAACTGTTCATGCTTAACGAGAGGCATTAAA TGTGGCAAATCTTGTTTCTGCAAAAGATGCCAAAATGGGAGACCTGAAAC TTTCTCCTCTaaacgaagaagaagaatccAACCATGCCTCAGTCAAACGT CGACCCTAACGTCTTTCAGTGCTGCTAATGAGTCTAGCAACATCATTTCA AACCGGATGAGTGAGGTAGAATCTCTTTTGCTAGAAGCAATATTGTTTGT TCTCATTCGAGATTTCGAGATCGATTTTGTGGGTAAGTTTGATGAGAACC ACCTCACTTGCCTCATTGTTGAGGAATACGATACAGTTTGGAAATGTATC TCAACAAAAAACGATTTCGACATTTCTAAACAACAATTAACAACCGAACT TGTTAAAAAATGGTTAAAGCATCGAAAGTTTCGTCTCTTGTTGGAGAAAG AGAAAAGGAAGTCAAAAGAAAACGTTTAGAATACGAAAATACGTCCTATA ACTGCACGATTGAAAGTACACTGAAAACTATGAATATTTTGGAAGCGAAC CTTGGGCAcatatttaattatttttaatatcGATTATCGCTGTAACTCAA ACTATTTTAGGTAAATACACGACCTTCTCATAGCGAACCAGTAGGATTTT CTcagccaatggggataaaaataacggactgaaactcgatggggattatC TTTCATGGctagggatttgaattccattgtttcaTAGTCAGGAAATTCAG TgacattttgcagtgaggattatCTGATTATCTTCAGTGGGGCAAAAATT agaatataattttccaccagggACAATATTTTGAGCAATATTTCCAATGG GAAGGGGTCCCtgtaggtctgtgagaagggccGGTGTttaaatatttcta tttttccaAGTAGAATGCATTTTCAAACTATGAATTTTTCATATCCAAAA GCTTTTTTAGCGAATGgagaaatattcaaaacattCCATAAAACTGTGCT ATTTTTAATAAATTACTTAAAGCCTTATACTAAAAGGAGAACCCAATCTT TAAGGGCCCGACCGGAACTTTACTTACCTTTCTATTTTTCATCTACAAGG TGTCCTCAAAAATGATGCCTTAAGGGAAAAA

Coding sequence (CDS) from alignment at sc0000246:345780..350910+

>TCONS_00016664 ID=TCONS_00016664|Name=TCONS_00016664|organism=Clytia hemisphaerica|type=CDS|length=11100bp|location=Sequence derived from alignment at sc0000246:345780..350910+ (Clytia hemisphaerica)
atgattttaaacaaaaaatgcaTGGAAATTGTCAACACGGTGATAAATGC
TGGGAATTGTAATCATCTGTCAAGACTTGACTGCATGCAATTGGTTGATC
AAAAGACCATTGACTCGGTAATTTTGCCCATATTGCTGTTCTGGGATCCA
TTAGAACAGCCATGTAAAACATTTATTTGTCCATTGTGCCATCAAGATGG
AAATCCAAATTCAAGATTGCACAGACcacaaactttgtttgatagtTGGG
AAGctggaagttcaaattcaatGATGCCACGAAAGATATGGGATGTAAAC
TGGTTCATTGCTTTGGTGGGTAGACGATATCATCGTATGAACTCACATTC
AGTTAGCTCGTATCACGCTGGTATACTTCGTCAAATGAATCCAGCTGAGG
TCCCGTTTATTTTGAGCCACGATAGTGGACTGACAATGGAGGCATTTGAT
TTGGTAAATCGGCTTGTTGATCATGGTAATTCCTTTTCAGTAACGCAAAA
GATTTTTACGGAGGGTATCATTGACAAATATCACCGTAGAAATGCATTTT
TCTTGCCAAATAAATATGAATTTAATGAAATCACCGATGAAGCTATAACG
CGGCCACCATCTGAACAGTTTTTGCGTGGTTGCTTTTTATACAACTACAA
CATGTATAAAAAAGTTTATAACGAAAAAATGCAAAGTATCAACTGTGAGT
ATCTTAGTTGTGACCACACGTTTAAAGTTGCGACTAACATCGGATACCTT
GACCAAAACAAAAAGTGGGTTAAAGTTGTCGACTCCTTATTTCTATTTAT
GAATGAGAAAGGACAAATTCTGGGATACAAGATGTGCAAAGGAACATCAT
TCAATCttgttgaagatattttcaaagACTTATCCGTCCGTAACCCACAC
ATCACGCACATATACTTGGATAACTGTTGCACGTGGAAACATAAACTCGC
AGAAGTTTTCCCGAATGCTATaGTGAAATTAGATTTGTTTCACGCAGTGC
AGCGGTTGGTAAAAACAATCAGTAAACGGCACCCTTACTGTCAGGACATG
TGCAAAGAGTTGACACTCGTCTTTCGAGACATCAATGATACTGGTGATGA
ACGATCAAAGCCAACCCCACCACcaaatcaaattataaaaaacatggaGA
CATTCCTCACAACCTGGGAGAATGTCGAATTCAAAGGCTGGAAAGTCTTG
ACCAGCAAGTTCCTAAAACAGTGGGATAATTTAAAAGTGCATGTCGATCT
TGGATGTTTATCTGGTATTCCTGTAGGCCACGGAACCAACAAGAACGAAA
ACCTTCACCGGCAAATGCGGATCTTATTGCCAAGAAATAGACTTGGTGTC
GACACAGCGGAGGCACTTTTTAACTCGCTATTTTATTATCACAACGAgag
aaagaaaacgaaaatagGCACAAAGGGACAACAAGTCAATATCAAACACG
TCTGGCCTATCTGGCAATTTGCTAAAGAAGATCATCATTTCGGGATTTCC
GATGCTCCTGTCAATAACAACATCGACTTCGACGAACCGTTTCTTATCGA
TTCACTCTACATGCATGACGATGAAGACATACCATGTGAACATGCCGATC
ATAGCGGTTACAATGTAAAAGAGTCTATTTCTGGGAGAACGAGACGAATC
ATCGCCATTGCGAAACAATTCAAGGAAATTCAAGCGAAGATGAATTCCGA
CCTGCTCTACCGCCTCTTTGGTACCAATGGTTTCGCCTCTTTACCTGCAG
ATGTATGGCAACCCATGGAATATCTGCAGGCTCAGGAAATAGATAACAAT
TTTCCAATCGATTCAATCATGCAAACGCTAGGTCTTGCTCAAATGAGACA
TTCTGGTCCTTTTGTTGATACTATTGCACAGCAGCTATCAGATATGCTTC
GGTATACTGATGTCAGCTCGAAATACCAATCATTTCTTGAGAGGAGTGGT
ATAAGAAAAGATAGTCCAACCGAAACCATCATTTCTAACCTTTTTTCAAT
CATCGAAGATGAGCTACAGTTCAATGAAGATGATTATGAGGTGTATTGCG
AAGACAAAACACAATCACATCCAGAAGCTTTAGCAAATTCACTTGGAATC
ATGATCGTTTTGGTACCAGCTTGCTTTGGTATGCCGTTTTTGCCAATTGC
CCCGAGGCAAGGCCTAGCCATACAAAACACGTTTTACGTATGGTGTGGGC
CAAACAAAACCCAATTTACATCATTGATAAGTATGGTAACCGGTCCAACT
AAAACAAGCTGTAGGTGCGGAAGGAGGAGCAAGAAAGAGGATTCATCCCA
TTGTCAATACAATGACAACTGTTCATGCTTAACGAGAGGCATTAAATGTG
GCAAATCTTGTTTCTGCAAAAGATGCCAAAATGGGAGACCTGAAACTTTC
TCCTCTaaacgaagaagaagaatccAACCATGCCTCAGTCAAACGTCGAC
CCTAACGTCTTTCAGTGCTGCTAATGAGTCTAGCAACATCATTTCAAACC
GGATGAGTGAGGTAGAATCTCTTTTGCTAGAAGCAATATTGTTTGTTCTC
ATTCGAGATTTCGAGATCGATTTTGTGGGTAAGTTTGATGAGAACCACCT
CACTTGCCTCATTGTTGAGGAATACGATACAGTTTGGAAATGTATCTCAA
CAAAAAACGATTTCGACATTTCTAAACAACAATTAACAACCGAACTTGTT
AAAAAATGGTTAAAGCATCGAAAGTTTCGTCTCTTGTTGGAGAAAGAGAA
AAGGAAGTCAAAAGAAAACGTTTAGatgattttaaacaaaaaatgcaTGG
AAATTGTCAACACGGTGATAAATGCTGGGAATTGTAATCATCTGTCAAGA
CTTGACTGCATGCAATTGGTTGATCAAAAGACCATTGACTCGGTAATTTT
GCCCATATTGCTGTTCTGGGATCCATTAGAACAGCCATGTAAAACATTTA
TTTGTCCATTGTGCCATCAAGATGGAAATCCAAATTCAAGATTGCACAGA
CcacaaactttgtttgatagtTGGGAAGctggaagttcaaattcaatGAT
GCCACGAAAGATATGGGATGTAAACTGGTTCATTGCTTTGGTGGGTAGAC
GATATCATCGTATGAACTCACATTCAGTTAGCTCGTATCACGCTGGTATA
CTTCGTCAAATGAATCCAGCTGAGGTCCCGTTTATTTTGAGCCACGATAG
TGGACTGACAATGGAGGCATTTGATTTGGTAAATCGGCTTGTTGATCATG
GTAATTCCTTTTCAGTAACGCAAAAGATTTTTACGGAGGGTATCATTGAC
AAATATCACCGTAGAAATGCATTTTTCTTGCCAAATAAATATGAATTTAA
TGAAATCACCGATGAAGCTATAACGCGGCCACCATCTGAACAGTTTTTGC
GTGGTTGCTTTTTATACAACTACAACATGTATAAAAAAGTTTATAACGAA
AAAATGCAAAGTATCAACTGTGAGTATCTTAGTTGTGACCACACGTTTAA
AGTTGCGACTAACATCGGATACCTTGACCAAAACAAAAAGTGGGTTAAAG
TTGTCGACTCCTTATTTCTATTTATGAATGAGAAAGGACAAATTCTGGGA
TACAAGATGTGCAAAGGAACATCATTCAATCttgttgaagatattttcaa
agACTTATCCGTCCGTAACCCACACATCACGCACATATACTTGGATAACT
GTTGCACGTGGAAACATAAACTCGCAGAAGTTTTCCCGAATGCTATaGTG
AAATTAGATTTGTTTCACGCAGTGCAGCGGTTGGTAAAAACAATCAGTAA
ACGGCACCCTTACTGTCAGGACATGTGCAAAGAGTTGACACTCGTCTTTC
GAGACATCAATGATACTGGTGATGAACGATCAAAGCCAACCCCACCACca
aatcaaattataaaaaacatggaGACATTCCTCACAACCTGGGAGAATGT
CGAATTCAAAGGCTGGAAAGTCTTGACCAGCAAGTTCCTAAAACAGTGGG
ATAATTTAAAAGTGCATGTCGATCTTGGATGTTTATCTGGTATTCCTGTA
GGCCACGGAACCAACAAGAACGAAAACCTTCACCGGCAAATGCGGATCTT
ATTGCCAAGAAATAGACTTGGTGTCGACACAGCGGAGGCACTTTTTAACT
CGCTATTTTATTATCACAACGAgagaaagaaaacgaaaatagGCACAAAG
GGACAACAAGTCAATATCAAACACGTCTGGCCTATCTGGCAATTTGCTAA
AGAAGATCATCATTTCGGGATTTCCGATGCTCCTGTCAATAACAACATCG
ACTTCGACGAACCGTTTCTTATCGATTCACTCTACATGCATGACGATGAA
GACATACCATGTGAACATGCCGATCATAGCGGTTACAATGTAAAAGAGTC
TATTTCTGGGAGAACGAGACGAATCATCGCCATTGCGAAACAATTCAAGG
AAATTCAAGCGAAGATGAATTCCGACCTGCTCTACCGCCTCTTTGGTACC
AATGGTTTCGCCTCTTTACCTGCAGATGTATGGCAACCCATGGAATATCT
GCAGGCTCAGGAAATAGATAACAATTTTCCAATCGATTCAATCATGCAAA
CGCTAGGTCTTGCTCAAATGAGACATTCTGGTCCTTTTGTTGATACTATT
GCACAGCAGCTATCAGATATGCTTCGGTATACTGATGTCAGCTCGAAATA
CCAATCATTTCTTGAGAGGAGTGGTATAAGAAAAGATAGTCCAACCGAAA
CCATCATTTCTAACCTTTTTTCAATCATCGAAGATGAGCTACAGTTCAAT
GAAGATGATTATGAGGTGTATTGCGAAGACAAAACACAATCACATCCAGA
AGCTTTAGCAAATTCACTTGGAATCATGATCGTTTTGGTACCAGCTTGCT
TTGGTATGCCGTTTTTGCCAATTGCCCCGAGGCAAGGCCTAGCCATACAA
AACACGTTTTACGTATGGTGTGGGCCAAACAAAACCCAATTTACATCATT
GATAAGTATGGTAACCGGTCCAACTAAAACAAGCTGTAGGTGCGGAAGGA
GGAGCAAGAAAGAGGATTCATCCCATTGTCAATACAATGACAACTGTTCA
TGCTTAACGAGAGGCATTAAATGTGGCAAATCTTGTTTCTGCAAAAGATG
CCAAAATGGGAGACCTGAAACTTTCTCCTCTaaacgaagaagaagaatcc
AACCATGCCTCAGTCAAACGTCGACCCTAACGTCTTTCAGTGCTGCTAAT
GAGTCTAGCAACATCATTTCAAACCGGATGAGTGAGGTAGAATCTCTTTT
GCTAGAAGCAATATTGTTTGTTCTCATTCGAGATTTCGAGATCGATTTTG
TGGGTAAGTTTGATGAGAACCACCTCACTTGCCTCATTGTTGAGGAATAC
GATACAGTTTGGAAATGTATCTCAACAAAAAACGATTTCGACATTTCTAA
ACAACAATTAACAACCGAACTTGTTAAAAAATGGTTAAAGCATCGAAAGT
TTCGTCTCTTGTTGGAGAAAGAGAAAAGGAAGTCAAAAGAAAACGTTTAG
atgattttaaacaaaaaatgcaTGGAAATTGTCAACACGGTGATAAATGC
TGGGAATTGTAATCATCTGTCAAGACTTGACTGCATGCAATTGGTTGATC
AAAAGACCATTGACTCGGTAATTTTGCCCATATTGCTGTTCTGGGATCCA
TTAGAACAGCCATGTAAAACATTTATTTGTCCATTGTGCCATCAAGATGG
AAATCCAAATTCAAGATTGCACAGACcacaaactttgtttgatagtTGGG
AAGctggaagttcaaattcaatGATGCCACGAAAGATATGGGATGTAAAC
TGGTTCATTGCTTTGGTGGGTAGACGATATCATCGTATGAACTCACATTC
AGTTAGCTCGTATCACGCTGGTATACTTCGTCAAATGAATCCAGCTGAGG
TCCCGTTTATTTTGAGCCACGATAGTGGACTGACAATGGAGGCATTTGAT
TTGGTAAATCGGCTTGTTGATCATGGTAATTCCTTTTCAGTAACGCAAAA
GATTTTTACGGAGGGTATCATTGACAAATATCACCGTAGAAATGCATTTT
TCTTGCCAAATAAATATGAATTTAATGAAATCACCGATGAAGCTATAACG
CGGCCACCATCTGAACAGTTTTTGCGTGGTTGCTTTTTATACAACTACAA
CATGTATAAAAAAGTTTATAACGAAAAAATGCAAAGTATCAACTGTGAGT
ATCTTAGTTGTGACCACACGTTTAAAGTTGCGACTAACATCGGATACCTT
GACCAAAACAAAAAGTGGGTTAAAGTTGTCGACTCCTTATTTCTATTTAT
GAATGAGAAAGGACAAATTCTGGGATACAAGATGTGCAAAGGAACATCAT
TCAATCttgttgaagatattttcaaagACTTATCCGTCCGTAACCCACAC
ATCACGCACATATACTTGGATAACTGTTGCACGTGGAAACATAAACTCGC
AGAAGTTTTCCCGAATGCTATaGTGAAATTAGATTTGTTTCACGCAGTGC
AGCGGTTGGTAAAAACAATCAGTAAACGGCACCCTTACTGTCAGGACATG
TGCAAAGAGTTGACACTCGTCTTTCGAGACATCAATGATACTGGTGATGA
ACGATCAAAGCCAACCCCACCACcaaatcaaattataaaaaacatggaGA
CATTCCTCACAACCTGGGAGAATGTCGAATTCAAAGGCTGGAAAGTCTTG
ACCAGCAAGTTCCTAAAACAGTGGGATAATTTAAAAGTGCATGTCGATCT
TGGATGTTTATCTGGTATTCCTGTAGGCCACGGAACCAACAAGAACGAAA
ACCTTCACCGGCAAATGCGGATCTTATTGCCAAGAAATAGACTTGGTGTC
GACACAGCGGAGGCACTTTTTAACTCGCTATTTTATTATCACAACGAgag
aaagaaaacgaaaatagGCACAAAGGGACAACAAGTCAATATCAAACACG
TCTGGCCTATCTGGCAATTTGCTAAAGAAGATCATCATTTCGGGATTTCC
GATGCTCCTGTCAATAACAACATCGACTTCGACGAACCGTTTCTTATCGA
TTCACTCTACATGCATGACGATGAAGACATACCATGTGAACATGCCGATC
ATAGCGGTTACAATGTAAAAGAGTCTATTTCTGGGAGAACGAGACGAATC
ATCGCCATTGCGAAACAATTCAAGGAAATTCAAGCGAAGATGAATTCCGA
CCTGCTCTACCGCCTCTTTGGTACCAATGGTTTCGCCTCTTTACCTGCAG
ATGTATGGCAACCCATGGAATATCTGCAGGCTCAGGAAATAGATAACAAT
TTTCCAATCGATTCAATCATGCAAACGCTAGGTCTTGCTCAAATGAGACA
TTCTGGTCCTTTTGTTGATACTATTGCACAGCAGCTATCAGATATGCTTC
GGTATACTGATGTCAGCTCGAAATACCAATCATTTCTTGAGAGGAGTGGT
ATAAGAAAAGATAGTCCAACCGAAACCATCATTTCTAACCTTTTTTCAAT
CATCGAAGATGAGCTACAGTTCAATGAAGATGATTATGAGGTGTATTGCG
AAGACAAAACACAATCACATCCAGAAGCTTTAGCAAATTCACTTGGAATC
ATGATCGTTTTGGTACCAGCTTGCTTTGGTATGCCGTTTTTGCCAATTGC
CCCGAGGCAAGGCCTAGCCATACAAAACACGTTTTACGTATGGTGTGGGC
CAAACAAAACCCAATTTACATCATTGATAAGTATGGTAACCGGTCCAACT
AAAACAAGCTGTAGGTGCGGAAGGAGGAGCAAGAAAGAGGATTCATCCCA
TTGTCAATACAATGACAACTGTTCATGCTTAACGAGAGGCATTAAATGTG
GCAAATCTTGTTTCTGCAAAAGATGCCAAAATGGGAGACCTGAAACTTTC
TCCTCTaaacgaagaagaagaatccAACCATGCCTCAGTCAAACGTCGAC
CCTAACGTCTTTCAGTGCTGCTAATGAGTCTAGCAACATCATTTCAAACC
GGATGAGTGAGGTAGAATCTCTTTTGCTAGAAGCAATATTGTTTGTTCTC
ATTCGAGATTTCGAGATCGATTTTGTGGGTAAGTTTGATGAGAACCACCT
CACTTGCCTCATTGTTGAGGAATACGATACAGTTTGGAAATGTATCTCAA
CAAAAAACGATTTCGACATTTCTAAACAACAATTAACAACCGAACTTGTT
AAAAAATGGTTAAAGCATCGAAAGTTTCGTCTCTTGTTGGAGAAAGAGAA
AAGGAAGTCAAAAGAAAACGTTTAGatgattttaaacaaaaaatgcaTGG
AAATTGTCAACACGGTGATAAATGCTGGGAATTGTAATCATCTGTCAAGA
CTTGACTGCATGCAATTGGTTGATCAAAAGACCATTGACTCGGTAATTTT
GCCCATATTGCTGTTCTGGGATCCATTAGAACAGCCATGTAAAACATTTA
TTTGTCCATTGTGCCATCAAGATGGAAATCCAAATTCAAGATTGCACAGA
CcacaaactttgtttgatagtTGGGAAGctggaagttcaaattcaatGAT
GCCACGAAAGATATGGGATGTAAACTGGTTCATTGCTTTGGTGGGTAGAC
GATATCATCGTATGAACTCACATTCAGTTAGCTCGTATCACGCTGGTATA
CTTCGTCAAATGAATCCAGCTGAGGTCCCGTTTATTTTGAGCCACGATAG
TGGACTGACAATGGAGGCATTTGATTTGGTAAATCGGCTTGTTGATCATG
GTAATTCCTTTTCAGTAACGCAAAAGATTTTTACGGAGGGTATCATTGAC
AAATATCACCGTAGAAATGCATTTTTCTTGCCAAATAAATATGAATTTAA
TGAAATCACCGATGAAGCTATAACGCGGCCACCATCTGAACAGTTTTTGC
GTGGTTGCTTTTTATACAACTACAACATGTATAAAAAAGTTTATAACGAA
AAAATGCAAAGTATCAACTGTGAGTATCTTAGTTGTGACCACACGTTTAA
AGTTGCGACTAACATCGGATACCTTGACCAAAACAAAAAGTGGGTTAAAG
TTGTCGACTCCTTATTTCTATTTATGAATGAGAAAGGACAAATTCTGGGA
TACAAGATGTGCAAAGGAACATCATTCAATCttgttgaagatattttcaa
agACTTATCCGTCCGTAACCCACACATCACGCACATATACTTGGATAACT
GTTGCACGTGGAAACATAAACTCGCAGAAGTTTTCCCGAATGCTATaGTG
AAATTAGATTTGTTTCACGCAGTGCAGCGGTTGGTAAAAACAATCAGTAA
ACGGCACCCTTACTGTCAGGACATGTGCAAAGAGTTGACACTCGTCTTTC
GAGACATCAATGATACTGGTGATGAACGATCAAAGCCAACCCCACCACca
aatcaaattataaaaaacatggaGACATTCCTCACAACCTGGGAGAATGT
CGAATTCAAAGGCTGGAAAGTCTTGACCAGCAAGTTCCTAAAACAGTGGG
ATAATTTAAAAGTGCATGTCGATCTTGGATGTTTATCTGGTATTCCTGTA
GGCCACGGAACCAACAAGAACGAAAACCTTCACCGGCAAATGCGGATCTT
ATTGCCAAGAAATAGACTTGGTGTCGACACAGCGGAGGCACTTTTTAACT
CGCTATTTTATTATCACAACGAgagaaagaaaacgaaaatagGCACAAAG
GGACAACAAGTCAATATCAAACACGTCTGGCCTATCTGGCAATTTGCTAA
AGAAGATCATCATTTCGGGATTTCCGATGCTCCTGTCAATAACAACATCG
ACTTCGACGAACCGTTTCTTATCGATTCACTCTACATGCATGACGATGAA
GACATACCATGTGAACATGCCGATCATAGCGGTTACAATGTAAAAGAGTC
TATTTCTGGGAGAACGAGACGAATCATCGCCATTGCGAAACAATTCAAGG
AAATTCAAGCGAAGATGAATTCCGACCTGCTCTACCGCCTCTTTGGTACC
AATGGTTTCGCCTCTTTACCTGCAGATGTATGGCAACCCATGGAATATCT
GCAGGCTCAGGAAATAGATAACAATTTTCCAATCGATTCAATCATGCAAA
CGCTAGGTCTTGCTCAAATGAGACATTCTGGTCCTTTTGTTGATACTATT
GCACAGCAGCTATCAGATATGCTTCGGTATACTGATGTCAGCTCGAAATA
CCAATCATTTCTTGAGAGGAGTGGTATAAGAAAAGATAGTCCAACCGAAA
CCATCATTTCTAACCTTTTTTCAATCATCGAAGATGAGCTACAGTTCAAT
GAAGATGATTATGAGGTGTATTGCGAAGACAAAACACAATCACATCCAGA
AGCTTTAGCAAATTCACTTGGAATCATGATCGTTTTGGTACCAGCTTGCT
TTGGTATGCCGTTTTTGCCAATTGCCCCGAGGCAAGGCCTAGCCATACAA
AACACGTTTTACGTATGGTGTGGGCCAAACAAAACCCAATTTACATCATT
GATAAGTATGGTAACCGGTCCAACTAAAACAAGCTGTAGGTGCGGAAGGA
GGAGCAAGAAAGAGGATTCATCCCATTGTCAATACAATGACAACTGTTCA
TGCTTAACGAGAGGCATTAAATGTGGCAAATCTTGTTTCTGCAAAAGATG
CCAAAATGGGAGACCTGAAACTTTCTCCTCTaaacgaagaagaagaatcc
AACCATGCCTCAGTCAAACGTCGACCCTAACGTCTTTCAGTGCTGCTAAT
GAGTCTAGCAACATCATTTCAAACCGGATGAGTGAGGTAGAATCTCTTTT
GCTAGAAGCAATATTGTTTGTTCTCATTCGAGATTTCGAGATCGATTTTG
TGGGTAAGTTTGATGAGAACCACCTCACTTGCCTCATTGTTGAGGAATAC
GATACAGTTTGGAAATGTATCTCAACAAAAAACGATTTCGACATTTCTAA
ACAACAATTAACAACCGAACTTGTTAAAAAATGGTTAAAGCATCGAAAGT
TTCGTCTCTTGTTGGAGAAAGAGAAAAGGAAGTCAAAAGAAAACGTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009315XLOC_009315Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016664-exon-sc0000246-1491911889:345780..346835TCONS_00016664-exon-sc0000246-1491911889:345780..346835Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1510915933:345780..346835TCONS_00016664-exon-sc0000246-1510915933:345780..346835Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1575043694:345780..346835TCONS_00016664-exon-sc0000246-1575043694:345780..346835Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1491911889:347701..348004TCONS_00016664-exon-sc0000246-1491911889:347701..348004Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1510915933:347701..348004TCONS_00016664-exon-sc0000246-1510915933:347701..348004Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1575043694:347701..348004TCONS_00016664-exon-sc0000246-1575043694:347701..348004Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1491911889:348503..348856TCONS_00016664-exon-sc0000246-1491911889:348503..348856Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1510915933:348503..348856TCONS_00016664-exon-sc0000246-1510915933:348503..348856Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1575043694:348503..348856TCONS_00016664-exon-sc0000246-1575043694:348503..348856Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1491911889:349114..350910TCONS_00016664-exon-sc0000246-1491911889:349114..350910Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1510915933:349114..350910TCONS_00016664-exon-sc0000246-1510915933:349114..350910Clytia hemisphaericaexon
TCONS_00016664-exon-sc0000246-1575043694:349114..350910TCONS_00016664-exon-sc0000246-1575043694:349114..350910Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016664-proteinTCONS_00016664-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:345780..350910 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.012313 0.0357054 0.159574 0.194644 0.313131 0.576886 1.11121 0.966467 1.33785 1.47307 1.70267 1.10951 0.012202 0.00655011 0 0.0330684 0.182743 0.0956138 0.0519411 0.0456031 0.0246384 0.022413 0.333852 1.03527 0.0147415 0.015723 0 0.0121645
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016664 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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