TCONS_00016682 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016682
Unique NameTCONS_00016682
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length593

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016682 ID=TCONS_00016682|Name=TCONS_00016682|organism=Clytia hemisphaerica|type=transcript|length=593bp
aaaatacaatgaaTAAGAAAAAGGTATTGACCAAAAGTATCAGTCAAAAT
GAATTGAGCTCAACAAACCTGTTACATcagagtgacgtcatcaaaaaaca
tCACGCGAAATCACCGAGAAGAAAACAATCAGCTGAACCACACTTTTATC
GAAagaGCTCCCTGAATTCAACTTTGGCTGGTGGCTATGATAGtaATGAA
GGTGATAACATCAAAGTCTTTGTTCGAATCAGACCTCCCCACAAACAAAT
ACATGAAGGTGGTGATAACAATGTTTGTTTGGAAGTCAACTCACCAAAAT
CTCTGACCATCTTCACCAAACCCGAACCAAAACAATTCAGTTACGACCAT
GTGGCAAATATGGAGACCACCCAAGAGGAAGTCTTTGCCACTGTTGGTAA
AGGTATCATGGAAGCTTTCATTGATGGATTCAATGGTACTATCTTTGCTT
ATGGTCAAACAGGCAGTGGAAAGACTTTCACTATGCTAGgacctccagat
GATGGTGACAACTTTTCACATGAGTTGCGTGGAGTTATCCCAAGAGGGTT
CGAATATATTTTCAGTCTCATCAACAGACAACAAGAAAAAGTA
Run BLAST on NCBI

protein sequence of TCONS_00016682-protein

>TCONS_00016682-protein ID=TCONS_00016682-protein|Name=TCONS_00016682-protein|organism=Clytia hemisphaerica|type=polypeptide|length=197bp
NTMNKKKVLTKSISQNELSSTNLLHQSDVIKKHHAKSPRRKQSAEPHFYR
KSSLNSTLAGGYDSNEGDNIKVFVRIRPPHKQIHEGGDNNVCLEVNSPKS
LTIFTKPEPKQFSYDHVANMETTQEEVFATVGKGIMEAFIDGFNGTIFAY
GQTGSGKTFTMLGPPDDGDNFSHELRGVIPRGFEYIFSLINRQQEKV
Run BLAST on NCBI

transcript from alignment at sc0000246:98788..107829-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016682 ID=TCONS_00016682|Name=TCONS_00016682|organism=Clytia hemisphaerica|type=transcript|length=9042bp|location=Sequence derived from alignment at sc0000246:98788..107829- (Clytia hemisphaerica)
AAAATACAATGAATAAGAAAAAGGTATTGACCAAAAGTATCAGTCAAAAT
GAATTGAGCTCAACAAACCTGTTACATCAGAGTGACGTCATCAAAAAACA
TCACGCGAAATCACCGAGAAGAAAACAATCAGCTGAACCACACTTTTATC
GAAGTAAGTCCTTGTTTTCCTCCATTTCGTAACCAGAGCCATTTGCATCA
CTTTTTTTATTGTTTTATTAATGGACGTAATACAATCCGTAACCTTTCGC
GAGCGCTATCAATCAGACTAAAAAAGTGAACAAAGATTGCTTTAATCCTT
AAGATAACTGCCTTGTTTTTTGATGACATGTCTTTAAGGTACACATTGGT
AAGAAATTAAAAGATGTGCACATCTGGTATTTTTGCGTTTCAAGTATAAC
CTCACAAATCAAGTGAGCTTTTTACAGCTTTTACAGCTACAACTTTCCAA
TTTTTTTCAGGGAAATATCCATTCCCGTTCCCGGTTCGGGGAAATGTCTT
GTCCGGGTGGGGAGAGTCGGGGAAAATATCCGTCGGGAAAGGTCTGGCAA
TCGTGATACTACATGGACATTTATTTGAAGAAGCCTTTAATAGAGACCCG
AAACCCGAGGCAAGGGCAAGGGGTGAAAGAAGGTGGTCTCCCCAATCAAG
TCCAATTAAACGCGCAACAAACGGACGGCACGGACCGACCTTGCCAACCA
CACGCGCATTATTACATTTTCCGGATACTTTTTGCTGGTCCGGTGAAAAT
TATCGGAAATGAGTGATCAACGCATGCGCTAAATATGTAAACAAAGCTGA
GTTGCGCGCTTTCTTGAAATTCTACAAAAAAAAACATGGCATATTTCTGT
TGTTGTACACGAAAGATTACAAAAATTTCGTTGTAATTATAATGTTTACC
TTTGGGGATTAGCAAATATAAACATGGAAGTTCAAGCAAGACCAAGAGGG
AAATCTTCCAGCTCCAGAAATCCTTCTGTAAATGGTAATAATATATTTAC
GTTCAGTTGTTTCTTTTTAAAGAAAAGTGATAAAAAGATATTCAGAATCA
AATATTTATAGTTGACAAGGACAACTTTTGATTAATAAATCCATCCATGG
TAAATCATCAAACAAAAAAGTGCACACTTCACTATCTACTTTACCATTAA
GGGAACAAAGATCTGGATCAAAACTGATAACATCAATAAAAATACACCTT
TTCCTCTATACCGTCAATTGCTCTAACTTGGGATGGACTATCTGACAAAA
CATGGGACGGCAATTTGGCCACCATTTCACTGAACCTCCAAAGTCATTTG
ATTTGAGTTAATGAACGGCATATTAAAAAAATACACAATTTCTCTTTCGA
ACTGAGTAGGGTTTTTAATCGAAATATGAAAAAAATCCGTAGGTAGTGGA
ACACACGCAAATGTCTGGAACGAAGAAGACCAAATAGTGGCAAAATGATG
GAGCATTTGACATCACTCGTGCAGCAAGTTACACACTCGTTATTTGTTAA
TCCCATCGGGCGACAGGCGGTTAGGCGACAGGCGTTCTCTAATTCTCCAA
TCAGTGTCCGGTCATTTTGAATGAAAATAAAAAAGTTAAAAAGGGCGCGC
TATCAGTGAAAGTTATCATGACATGTTATGACAGAAAGCATGATTGATAA
ACTTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAGAGATTTAACAGTA
AGTGAAAATACAGGCCAGATATCAATCCCATGTTTCGACCAATCGTCCCA
AGTTAGAGCAGTTGACGGTAATGTCCAGTTTGAATTCCAAAAAACAGAAC
TTGAATGAAACGAGTCCAATTTTCTATTTCTCTTTTTTGGGAGCCCCCTC
CGATGAGCGGAACCAAATTATACGCATTCACACATTTTTTTTGAAATTGA
CACATTCACACAAAATTAAATCTTTCACGAGTTTCATGCATAAAAACCTC
ATTTTTTTTAAATATCGGGGAAACATTTTATCAGGCAGCTTGACACACAC
TTGTATTTTTGTGTCCATAAACTCAGCATAAACAGTACAAATGAACCAAC
ATTTCTACAAAAGAGACCATGACAAATGAAATTTCACTGCCAGACTAGTG
CGCCCTTTTTTAATCTTTTTGTTCTCCTTCAAATGGCCAATGTTATCGAT
TGGAGAATTATAGAGCCCCCGTCCCCCCAGTCTGGAAAGAAGGCAATATC
TACACCAGAGTTTTCTTGGTGTAGCCTTGGAATAAGCCTATGAAATCCAT
GGTCTACGCTGGTCATTAAAATACAAACAGGCTAACTCTAAAGCTCTAAA
ACAGCATCTAGTAACATGAAAACCAGAATATGATTCTTCAATGGGAATCA
ACAATATGTCCCATCTAACAGAATTAATAATGGCACTGTCATCATTGACG
TAACAAAACAAAGGATTTTCTTTCAAGAGCGTTGTAAACACTCCAACAAC
TTCCATCGAAATGATCTGTCACAGTTAAGTCTACCATTTTAGTGAGGTCC
AAGGATTAAGCTGAGACCTCCCACAAAACGCCTGCAAGCTCCCACGCGAG
TGAAAAACTTTTTTAATCTGTCAATCATTTTCTCAAGTGAAGAGTACGAT
AGGATACAAAGTCATAAAACCTGAACTAGAAGACCTATGACCCTAAAATT
TTGCACAAGTACTCTTAATAAGATTTTATTAAAGTCAGAAAGTTTCAAGT
CGTTTAAAAAATCTTTCTCTAAGATATACGAAATAACTCCAGCGTGGTAG
ATTCTGCCCCCCCCTCCTGGGGCTAATAAGGTTAATTCTTTGTTAGAATA
CAATTGCTATTTATAAGAACAAAGGAAATTTTCGATTTTTGCTCTTTGAA
CATGATGAGAAACGTCATCACAAACATTTTTTGTCAAAAGTTACATTATA
TGACAAGAATCTTGTGTACCAAATTTTATACAAAAAGACCCACTAGATCA
AAAGTTAATGGGTGGTACAGGAACAGCCCCCCCTCGTTTTGAACCATCCC
TAAAAGCCAAGTATGAGTAGGGTTATATAAAATTTACTGTAAATAAGTAA
GGTTTCCTGTATATCGTCGCATCAAAATAAAAAAGCTTTAAGTACATTTT
TTTGAAAATTGAGTTATGACCATACCGATGCTTTACACCCCATTTTTACC
ATCTTTTTGGCTTAAATCCATCAAAAACCAACCTAAAGTGGCTTAATTTT
AAGCTTTTAGAAAAATGAGAATTTTACTTTTCACTTAATTTTCAGGGTAA
AAAAGCCTTAAGTCACATCAGTTTAGGGCAAAAAAGCCTTATAACCAGTG
TGGAAACAATTAGGCCGACCCTAAAAATTTTTTCGTTTCCGGTCCACCGG
GTAACGAAAAAAAAAGTCATGCAGGCGTCCGGGAAGATTTTTTTTTTGGT
ACTTTTCATGATTTCTAATAAAAGAAATTAGAAGGAAAAAAATCATCTCT
CTGGCTGTTAGTGTTGCTCCACATTCTGTCTTTATATTTTTTCTTTCTTT
CACTGAAAGNNNNNNNNNNNNNNNNNNNNNAGTGTTGCCCCACATTCTGT
CTTTATATTTTTTCTTTCTTTCACTGAAAGAAATGTGTTGCTATTAATTA
CAAAAAGCTGTACTTTGTGATTTTTTTTCTTCTAAGAATCAACAAACTTT
TCATTCTAATAAATTGATTTAATATGCATAACACTATTTATTTGATCTTT
AACGTCCAGAAAGCATGCTAAATAAACAAACTTTTTGAAGAATGTTATAT
AGGAACGATGTAACAGTTTGAAGAGTCATGAGTAAAGGTTTTTAAGAAGA
AAGTTTCATCTCTTATGTATTTGGTTCTTATGAAGAAAAAAATGCGGCCG
GGTGACGACGAAAAAAAATTTCACCCAGCCGGTGAACCGGAAACTTTTTT
TCTTTTAGGGTCAGCCTTATGGACCCAAGGCTTTTTAACACAAAAATATT
TCAAATGTTAATGGTTTTTCAGGATTTAAGGAAAAATAATTTAAAGTCGA
TTTTCTCAAAACAACAAAAATGGACTTAAAGCTTTTTCATTTTGATGCGG
CGATATTATATCAAATTTAGATCAACGTTTGGCCCAGAGAGGCTAAATTC
ATGGAAATTTTTTAGTTTCTATAGCAACTACCCCAGATATATTTATATCT
TATAAGCTTATATAAGCTTTAAATTTTAGAAAAAAAATTTAATACCTCAA
CATACAAAGCTCTTGGAAAATGAACTTGCCAAAAAAAGTCTTGTTTCTGG
AAAGGCTGGTGACGAAAAGTAACTCGTTTGGCTGGGCACAAAATATCTTT
TTACATTTTTAGATTTTCCTTTTTCTTTATTTTTCTGTATGTTTTGCTTG
GTTTGTGTATTCTTTTCATATTTTTGTGTATCATCACTAGCAAGTAGAGG
ATTGCCCAATTTTGTTGAGAAATTTATCTATGTCATGCCCAATTTTGTTG
AGAAATTTATCTATGTCATGTAAATTGGACCTTTGGGCTTTTTCATTGTG
AGTGCATGCATGCGGACTGCATTCTGATTTGAGAATACAAATAATTTTAA
AACCTATTTTTGACACTGAAAATTTTTGACTTTTCATGTAATCTTATTGG
CATTTTATACATGCGTAAACCGTAAACCGTAATTTTACAATTATACACCA
AATAGATCAGGTTTTATGACCTTTTTGTGCAGGCATTATAAAGTCCAGCT
AAAGCCCTGTACAATTCCAAAATCTTTCTTACTTACTTAAAGATATTCTT
TTCGATATTGTTCAACTTTAATAGCAATTCTAGTTGAGACCTTTTTTACT
GGTCAGCGGTAATTGTGAAACTTTGCAATGACGTCATCACCCTAGATTTT
TTCTATGTATTCCTTTTATGGTAGTCATTATATTGTCATAAACATCATCA
CACCCACTGCAATTTTCAGACATACTAGAGTTTGTAATGGAAAGTTTTCA
AAGTTTGCGAAAGTGTTATTTGATGAATTTAAAAACTTTTGGAAGAGTGA
GGCAACAATTTTAAGCCGCATGGTTACCTTTAGCAAAAATATATATTGAT
ATTCAACTTTGAGGGTTGCCATAGTAACTAGGAAATTTGATACCAGTGGA
AAGAACTCAAATCTTTGATGAATTTAGATGTGTAAAACTAATCTTGACAA
TAATCCAGTCAAAAGTTTTAGCATATCTTAGCTTTAGGTTGGAAGGGCTT
AACAATGACATCATTAAAATAAATTTTGACTGAATTAATTATGGGTGATG
GCTAAAAAACGATTGATCGTTCCATTAATCAAAATTTTTTTAAAGCAAAA
TTTTCACTTTCATGTTTCATTTTTCCCACATTATTATTTTACCACAACTT
GCTATTTGAAATTAAAAACCTCTTAATTTATGAAATATAAAGTATTTGAC
TCAACCCATCAAAACATTTTCCTAAATTGAAATTGTAGGTTAGAATGATA
AGCAGATATTCAATAGGTAAAAGTTGGTTATTGAGATTTATTAATCCGAG
GTGAGGTAATGTGCAACGAGACGAAGCCGAGTTGAATATTTGTCACAGAG
GGTTAATAAATCCAATAACCAACGTAAACCTATTGAATATAGTTAATAGA
AATAGCTAATAGGTCATAAAAACCATCAATCAAAATAAACAATATGATAA
AAAAAGATTGAAATTTACATAAATGATGGGTGTTTGAAGTAAGATTGGCA
TCAATTAGTACAGTATATGGTCTCTAAAATGTAGGTTTGTATATTAAGCA
GATATTCAATAGGTAAAAGTTTGTTATTGAGATTTATTAACCCGAGTTAA
TGTAATGTGCAACGAGACGAAGCCGAGTTGAATATTTGTCACAGAGGGTT
AATAAATCCAATAACCAACGTAAACCTATTGAATATAGCTAATAGAAATA
GCTAATAGGTCATAAAAACCATCAATCAAAATAAACAATATGATAAAAAA
AGATTGAAATTTACATAAATGATGGGTGTTTGAAGTAAGATTGGCATCAA
TTAGTACAGTATATGGTCTCTAAAATGTAGGTTTGTATGCTTTTAAGCAG
ATATTCAATAGGTAAAAGTTTATTATTGAGATTTATTAACCCGAGGTAAT
GTAATATACTGTTTTATATGTACAATGGCAGTTACAAGATATAGTCAAAA
TTTCTGATGGAGAAAGCTTCTTTTGTTATTATTCCTCTTATGGAAATATT
ACTCCTCATAGAACTTTTGAGTGCCTTCTGTAACTTTTGTTGATGGACAA
AGATGAATTAAGGTTAGGGGAACCCAACTGTATAATTGAATATTTATCTA
TAGTAATGTTGATAATTATTATCGTGTATGCTTCTCAATCAACATTTTGA
TACACTTTAAGTTACTTCTGAAAAAATTCTTCACTTTTTTCTTTTTTTGT
TTGTTTTCACTTGAAGATGAAAAAACTTTATTATTAGAAATCTTTTATTG
CATTATTGGCTTATATTTACACTTTTTTCAAACATCAATTATTGAATGAA
ACTTAAAATAGCAATCAGTTCTTTTATTTTTAGTTTTGAACAAATCTATG
TGTTTTAGTTGTACCTTCTCATATTTTAATCTCTTTACTCTTTCCTTTAA
AAGGATTTGTATATTTTAATGGATTTTTATGAGGTTTTATCATTTAAAGT
GATCCTACTAAGAATTTGATGAAATGGAAATGTTTTGAAAAACTTTTAGT
AGAAATTTCAAATAATTTTTTTGATGAAGGAGACACTTTTTAGCTGAAAA
TATGCTCAGAAAACAAGTTATGAAAAAAAGTAATGTATTCTCAACTTTGG
TTGAGCTAGAATCTGAGAATGTCTGTCTGTCTGTCTGTCCATCTGTGTGT
GTATGTCCCTAATACTTCGGGGCAGCCTAGAGACAACCTTCTGCTTATTG
TAGATTTTATTTTAACCCTTTCATTCCCACGCGACCGCACTGCGGTCCCT
TTGGACCCGTCGTTTTTTCCCAGAGGACTGCATAGCGGTCCCTGATTTAT
TTTTTAAATTGTGATGTTTTGGCGGGAAATAAAGAGATGTCTTTAAACTG
CTTTCAAAGCAGATAAGATAGCGCGTCGTGTGCAAAAGACCGCGTAAAAA
AAGCTTGTTCGAGTAAAAAGTTTTGTTTACAAAAGTATTTACAAAAATTT
TTGCAAGCAAAATCTGTAAGGCCGAAAATGGGATTTTTTACAACCTCTAT
CAATCATTATGATTTTTCTATGAGGGCTAATCAAACAATTCTTTTTTCAG
TTAGTAGATACTGTTGTGCTAAACATTTATCAGAAGAATGAATGGATTTA
AATCATTTTTTCATAAAAAAAGTTACCATTGAATTGCAAAAAAATGCTGT
TTTCAAATTTATTGTTGCCTTTCTCTGGTTACGTGACACGCTGATGACGT
CATTTTGCAAATTTTTTACTATCAAAATGATCCTCATACTATTAGTGAAA
AAGGGTGAAAACTTTAGAGGACTAGGTTTAGTGATTCTNTATGAAAAAAA
GTAATGTATTCTCAACTTTGGTTGAGCTAGAATCTGAGAATGTCTGTCTG
TCTGTCTGTCCATCTGTGTGTGTATGTCCCTAATACTTCGGGGCAGCCTA
GAGACAACCTTCTGCTTATTGTAGATTTTATTTTAAGGGCTTATTCATTT
CATAGGGTTTATGTCTTTGCTCTGATTTTTTCAAATTTTCTTGAACCCTT
TGTTATTCTATTTATTCTATAGTATTTCTTGAATGAGTTTTTTTTTAGCA
TTAATGTTCTTAAATGATGATAGTGAAATTGCTACCATTGTTATAATCAT
TTTTTTTTAATTTTCAGAGAGCTCCCTGAATTCAACTTTGGCTGGTGGCT
ATGATAGGTAAAACCAAACTTTTTAACTTATATTTTTTGCCTAGTATAAT
AGAATCTTGCTCTATGTAAGACATCATTTCTGCTTTGGGTTTTATTGCTC
TCCATAATGATTTTGTCTTTTAATCCTAGTTTACTTCAAATATAGTAGGG
GCCAACCCTCCAACTCTTAGGATCTGTAATTATTCCGAAGGCAGACAGGA
TTTTGAGGCTTTTTTAGGCCCAATTTTTGGGAGTTTTGTCTTTAAACGTC
CCATGAAAGATGCTACCGAATGAAGTTGAAGTCAAACTCATTTTTATTTC
AATTTTATTTAGTAATGAAGGTGATAACATCAAAGTCTTTGTTCGAATCA
GACCTCCCCACAAACAAATACATGAAGGTGGTGATAACAATGTTTGTTTG
GAAGTCAACTCACCAAAATCTCTGACCATCTTCACCAAACCCGAACCAAA
ACAATTCAGTTACGACCATGTGGCAAATATGGAGACCACCCAAGAGGAAG
TCTTTGCCACTGTTGGTAAAGGTATCATGGAAGCTTTCATTGATGGATTC
AATGGTACTATCTTTGCTTAGTAAGTACCTAATCTGATGTTTTATTTTGA
TCAGATGAATAGTGTATGTGTGATTCTTCCAGGGAGTTTTTTTAAATGAT
AAAGTATGTAACAGTTAGCAACTAAAGCTATAAAATCAAGTTCAAGGTTT
AACCTTCTCTTTTCTTCATTAGTACCACCATAAAGTAATCTGAATTATTA
TTTTTAGCAGATCCTACCATTATTTCTCTAACTATAAACTCTCTTTTTTT
TAGTGGTCAAACAGGCAGTGGAAAGACTTTCACTATGCTAGGTAAGTCTC
AACTAATGGAAATGTTCAAGAATGTATCATTTTAGATATATAATACACAC
AAGACCATCAATTAGGGGTTTTTGACACAGTGTATTATGTCCTTATTGGT
ATCAACTTTTTGCGTGGTCATCTTTTGAGGATTTACAAGGAAAATTCTTT
TAATTTCGAAAACACAAGGAGCGCCCGGTCTCTTCAAAAGATGTAAATGC
TGATGATTTAAAATATATTTCCTTTTGTCTGTTTATAGGACCTCCAGATG
ATGGTGACAACTTTTCACATGAGTTGCGTGGAGTTATCCCAAGAGGGTTC
GAATATATTTTCAGTCTCATCAACAGACAACAAGAAAAAGTA

Coding sequence (CDS) from alignment at sc0000246:98788..107829-

>TCONS_00016682 ID=TCONS_00016682|Name=TCONS_00016682|organism=Clytia hemisphaerica|type=CDS|length=2955bp|location=Sequence derived from alignment at sc0000246:98788..107829- (Clytia hemisphaerica)
GACCTCCAGATGATGGTGACAACTTTTCACATGAGTTGCGTGGAGTTATC
CCAAGAGGGTTCGAATATATTTTCAGTCTCATCAACAGACAACAAGAAAA
AGTATGGTCAAACAGGCAGTGGAAAGACTTTCACTATGCTAGTAATGAAG
GTGATAACATCAAAGTCTTTGTTCGAATCAGACCTCCCCACAAACAAATA
CATGAAGGTGGTGATAACAATGTTTGTTTGGAAGTCAACTCACCAAAATC
TCTGACCATCTTCACCAAACCCGAACCAAAACAATTCAGTTACGACCATG
TGGCAAATATGGAGACCACCCAAGAGGAAGTCTTTGCCACTGTTGGTAAA
GGTATCATGGAAGCTTTCATTGATGGATTCAATGGTACTATCTTTGCTTA
AGAGCTCCCTGAATTCAACTTTGGCTGGTGGCTATGATAGAATACAATGA
ATAAGAAAAAGGTATTGACCAAAAGTATCAGTCAAAATGAATTGAGCTCA
ACAAACCTGTTACATCAGAGTGACGTCATCAAAAAACATCACGCGAAATC
ACCGAGAAGAAAACAATCAGCTGAACCACACTTTTATCGAAGACCTCCAG
ATGATGGTGACAACTTTTCACATGAGTTGCGTGGAGTTATCCCAAGAGGG
TTCGAATATATTTTCAGTCTCATCAACAGACAACAAGAAAAAGTATGGTC
AAACAGGCAGTGGAAAGACTTTCACTATGCTAGTAATGAAGGTGATAACA
TCAAAGTCTTTGTTCGAATCAGACCTCCCCACAAACAAATACATGAAGGT
GGTGATAACAATGTTTGTTTGGAAGTCAACTCACCAAAATCTCTGACCAT
CTTCACCAAACCCGAACCAAAACAATTCAGTTACGACCATGTGGCAAATA
TGGAGACCACCCAAGAGGAAGTCTTTGCCACTGTTGGTAAAGGTATCATG
GAAGCTTTCATTGATGGATTCAATGGTACTATCTTTGCTTAAGAGCTCCC
TGAATTCAACTTTGGCTGGTGGCTATGATAGAATACAATGAATAAGAAAA
AGGTATTGACCAAAAGTATCAGTCAAAATGAATTGAGCTCAACAAACCTG
TTACATCAGAGTGACGTCATCAAAAAACATCACGCGAAATCACCGAGAAG
AAAACAATCAGCTGAACCACACTTTTATCGAAGACCTCCAGATGATGGTG
ACAACTTTTCACATGAGTTGCGTGGAGTTATCCCAAGAGGGTTCGAATAT
ATTTTCAGTCTCATCAACAGACAACAAGAAAAAGTATGGTCAAACAGGCA
GTGGAAAGACTTTCACTATGCTAGTAATGAAGGTGATAACATCAAAGTCT
TTGTTCGAATCAGACCTCCCCACAAACAAATACATGAAGGTGGTGATAAC
AATGTTTGTTTGGAAGTCAACTCACCAAAATCTCTGACCATCTTCACCAA
ACCCGAACCAAAACAATTCAGTTACGACCATGTGGCAAATATGGAGACCA
CCCAAGAGGAAGTCTTTGCCACTGTTGGTAAAGGTATCATGGAAGCTTTC
ATTGATGGATTCAATGGTACTATCTTTGCTTAAGAGCTCCCTGAATTCAA
CTTTGGCTGGTGGCTATGATAGAATACAATGAATAAGAAAAAGGTATTGA
CCAAAAGTATCAGTCAAAATGAATTGAGCTCAACAAACCTGTTACATCAG
AGTGACGTCATCAAAAAACATCACGCGAAATCACCGAGAAGAAAACAATC
AGCTGAACCACACTTTTATCGAAGACCTCCAGATGATGGTGACAACTTTT
CACATGAGTTGCGTGGAGTTATCCCAAGAGGGTTCGAATATATTTTCAGT
CTCATCAACAGACAACAAGAAAAAGTATGGTCAAACAGGCAGTGGAAAGA
CTTTCACTATGCTAGTAATGAAGGTGATAACATCAAAGTCTTTGTTCGAA
TCAGACCTCCCCACAAACAAATACATGAAGGTGGTGATAACAATGTTTGT
TTGGAAGTCAACTCACCAAAATCTCTGACCATCTTCACCAAACCCGAACC
AAAACAATTCAGTTACGACCATGTGGCAAATATGGAGACCACCCAAGAGG
AAGTCTTTGCCACTGTTGGTAAAGGTATCATGGAAGCTTTCATTGATGGA
TTCAATGGTACTATCTTTGCTTAAGAGCTCCCTGAATTCAACTTTGGCTG
GTGGCTATGATAGAATACAATGAATAAGAAAAAGGTATTGACCAAAAGTA
TCAGTCAAAATGAATTGAGCTCAACAAACCTGTTACATCAGAGTGACGTC
ATCAAAAAACATCACGCGAAATCACCGAGAAGAAAACAATCAGCTGAACC
ACACTTTTATCGAAGACCTCCAGATGATGGTGACAACTTTTCACATGAGT
TGCGTGGAGTTATCCCAAGAGGGTTCGAATATATTTTCAGTCTCATCAAC
AGACAACAAGAAAAAGTATGGTCAAACAGGCAGTGGAAAGACTTTCACTA
TGCTAGTAATGAAGGTGATAACATCAAAGTCTTTGTTCGAATCAGACCTC
CCCACAAACAAATACATGAAGGTGGTGATAACAATGTTTGTTTGGAAGTC
AACTCACCAAAATCTCTGACCATCTTCACCAAACCCGAACCAAAACAATT
CAGTTACGACCATGTGGCAAATATGGAGACCACCCAAGAGGAAGTCTTTG
CCACTGTTGGTAAAGGTATCATGGAAGCTTTCATTGATGGATTCAATGGT
ACTATCTTTGCTTAAGAGCTCCCTGAATTCAACTTTGGCTGGTGGCTATG
ATAGAATACAATGAATAAGAAAAAGGTATTGACCAAAAGTATCAGTCAAA
ATGAATTGAGCTCAACAAACCTGTTACATCAGAGTGACGTCATCAAAAAA
CATCACGCGAAATCACCGAGAAGAAAACAATCAGCTGAACCACACTTTTA
TCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009322XLOC_009322Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016682-proteinTCONS_00016682-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016682-exon-sc0000246-1575043694:107677..107829TCONS_00016682-exon-sc0000246-1575043694:107677..107829Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1575043694:99973..100012TCONS_00016682-exon-sc0000246-1575043694:99973..100012Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1575043694:99410..99667TCONS_00016682-exon-sc0000246-1575043694:99410..99667Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1575043694:99139..99176TCONS_00016682-exon-sc0000246-1575043694:99139..99176Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1575043694:98788..98891TCONS_00016682-exon-sc0000246-1575043694:98788..98891Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1510915933:107677..107829TCONS_00016682-exon-sc0000246-1510915933:107677..107829Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1510915933:99973..100012TCONS_00016682-exon-sc0000246-1510915933:99973..100012Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1510915933:99410..99667TCONS_00016682-exon-sc0000246-1510915933:99410..99667Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1510915933:99139..99176TCONS_00016682-exon-sc0000246-1510915933:99139..99176Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1510915933:98788..98891TCONS_00016682-exon-sc0000246-1510915933:98788..98891Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1491911889:107677..107829TCONS_00016682-exon-sc0000246-1491911889:107677..107829Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1491911889:99973..100012TCONS_00016682-exon-sc0000246-1491911889:99973..100012Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1491911889:99410..99667TCONS_00016682-exon-sc0000246-1491911889:99410..99667Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1491911889:99139..99176TCONS_00016682-exon-sc0000246-1491911889:99139..99176Clytia hemisphaericaexon
TCONS_00016682-exon-sc0000246-1491911889:98788..98891TCONS_00016682-exon-sc0000246-1491911889:98788..98891Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:98788..107829 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	53.5535	31.2544	23.3386	23.7733	3.07952	2.31505	5.25178	4.5843	3.9282	1.05569	2.6632	2.61904	2.546	3.02607	1.80029	3.71946	1.40833	0	0	1.04797	20.4513	10.4644	0.628688	0.838783	0.51112	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001752Kinesin_motor_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003777microtubule motor activity
GO:0008017microtubule binding
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007018 microtubule-based movement
molecular_function GO:0005524 ATP binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003777 microtubule motor activity
Blast
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BLAST of TCONS_00016682 vs. Swiss-Prot (Human)
Match: KIF15 (Kinesin-like protein KIF15 OS=Homo sapiens GN=KIF15 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.452e-55
Identity = 91/150 (60.67%), Postives = 114/150 (76.00%), Query Frame = 3 
Query:  153 KSSLNSTLAGGYD--SNEGDNIKVFVRIRPPHKQIHEG-GDNNVCLEVNSPKSLTIFTKPEPKQFSYDHVANMETTQEEVFATVGKGIMEAFIDGFNGTIFAYGQTGSGKTFTMLGPPDDGDNFSHELRGVIPRGFEYIFSLINRQQEKV 593
            K+ L S   G  +  SNEGD IKVFVRIRPP ++     G+ N+CL V S  SL + + PEPK F++DHVA+++TTQE VFATV K I+E+ + G+NGTIFAYGQTGSGKTFTM+GP  + DNFSH LRGVIPR FEY+FSLI+R++EK 
Sbjct:    6 KTELRSVTNGQSNQPSNEGDAIKVFVRIRPPAERSGSADGEQNLCLSVLSSTSLRLHSNPEPKTFTFDHVADVDTTQESVFATVAKSIVESCMSGYNGTIFAYGQTGSGKTFTMMGPS-ESDNFSHNLRGVIPRSFEYLFSLIDREKEKA 154
The following BLAST results are available for this feature:
BLAST of TCONS_00016682 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIF155.452e-5560.67Kinesin-like protein KIF15 OS=Homo sapiens GN=KIF1... [more]
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