TCONS_00016686 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016686
Unique NameTCONS_00016686
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length979

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016686 ID=TCONS_00016686|Name=TCONS_00016686|organism=Clytia hemisphaerica|type=transcript|length=979bp
CGCATTTTGGAGGTTTGTATCTTAGGTTttccactttcactttcaacaaa
attcaaaatggcggccgtTGGAGCCTTTACTTCTATGGATCAAGCTGAAG
atttaaaaGCATTTGAAAGACGGTTGGTAGAACATATTAACAACCTTGGA
CCAAAAGCCAGCTTTTGGAAAGtGGTTGTGCTCATCACATTTCTTGTGAC
TGCATTTACTGCTTCACAATGGGCTCTTGACCAACAAACTGTAGAAttat
cgTTTTGGCAATCGTTATGGAACCATCCCAGTTTCTTTTGCAGCATTGTT
GCTATATTCATCTTATTTCTTCTTGGTGTTCACAAACGTATTGTCATCAA
AACAATAATGTTGACACGATGTCGGAATGTTTTAGAAGATTTCAATATGT
CTTGTGATGAGATTGGTCGACTAATATTGAAACCGAGACCAAAAGAAATG
GACATCTATCAAcgtttatataaccctggacatGGTTAAGTGATGCTAAA
CAGCTAGTCTCTATTTTTAATACaaagattttttatgaattatttCCGGG
GTCACCCCTACTTCATGCATGCCGTAGGCATTTACCCCTCTCCAGCCCCA
AAGCccaattgaaaagaaaaagggaCAATTTGATAATGATACATTATTTC
ATTTTCCAATTGTTCCAACTGATTCGAATCAGATGCATGTTTAACATCGG
GGACGGGGGATGgtatttttatatgatttttacCGAGTATTCAATTCtta
tgaaagtttaaaaaaataaataaaacaataaaacaaaaaccttcTTTCCA
TTTTTCTGCTTTTCAAAACAACTTTATTGCAACGACGTAATTAAACATTC
TCAATCCATTATTAAATGACATCACTCcttgaccaattttccaattttcc
aataTTCTTTTATTCCAAATGCTATTTGATATCACATGATGTCAGTTGCa
cttagggagtggtcagaatgTATCCTCAG
Run BLAST on NCBI

transcript from alignment at sc0000246:132935..147672-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016686 ID=TCONS_00016686|Name=TCONS_00016686|organism=Clytia hemisphaerica|type=transcript|length=14738bp|location=Sequence derived from alignment at sc0000246:132935..147672- (Clytia hemisphaerica)
CGCATTTTGGAGGTTTGTATCTTAGGTTTTCCACTTTCACTTTCAACAAA
ATTCAAAATGGCGGCCGTTGGAGCCTTTACTTCTATGGATCAAGCTGAAG
GTAAATCCATTTCAAGCTATTTTTTCTCCCTAGAGATGCATATATTAGTG
TGTAAAAGAAAGTCCAAGTGTCATAATCGACTATTTCTTTGTTTATTAGG
AATCATGGCAAGGTAAATGTCACAGAACAATCCTTTTTTTCCATTATTTA
TTTTCAAATGTCAAAAACAAAAACATTGTCTTTACACCAAATTCAAAACA
AAAGCATTCTTCACAACAAATTCAAAACATGTTATTTACCCCAAAAGAAG
GGACACAATAACACACTATTGCATGATTAATGCAGCGCATTGCTTGCGAG
TCAAGTAAACGATATACCGCTTTTGCAGCATTAATCTTCAGTGTAGCTGG
AACGGTAAACCTTCTGATATTCCAGGATTAGAAAAAGCTATACCTGTTAT
CTTTTTTCTTTAAAGAGTCAACAAGCCATCAACATCGATAAATTACACAC
ATTTCCTCAGAAACTTTTAAAATTATCTGCCATTATGACTTTCTTGAAGC
CGTTCTGAAATTAACCAATCGGGTTATGTATCGGAATTCTTATGGGTGCT
CTTTTCCGAGATTTGTAAAATAGCTAAGTCGGCAAAAAAACTTTTCCCGG
GGGTTTGAGGAATAAACAGAACTGCCATCATTTGTTTTTTATTTAACCAT
ATATTTAAATTTGTGCTCAAAAATACTTAAATAAATGAGTTAATAATATT
CAATATACTATTTGTATCTCTCAGAAAAAAACACTTACAGAACGACATAG
TTTATCATTTGGAATACCCCCGTGTTTGGACTATTCTATTCTGGGCGCAA
AATAGGGCGTAAACTAAGTAGCACCCTCATTGCAAGATTGCCGCCTCATC
TTTATTCGCCCGCGCGGGAACGCAAGGTAATAATTTTTTTCTCGCGCGCT
TTAAGGGGAAAAGGAAAGTGATTGATATTCTTTGAAGAAAAAAACGTCAG
AAACAAACTCAAAGACCAAAAGATGTATTTTGTTGTTGAGAATCGATCCT
GTGAAGATGAAAAAATTTCTTCTATGCGTTTTTTTTCGGAATGCTGAAAA
ACTCTAATTTCAATTTTCCTTAAGGTAAAGAGGTTGCGAGATTTGGGTTA
GCGAGGCAAAAATTGCTAAAAAGCTGGTAAAATTGTAATCCTCAAAAATC
GAAGTTCCAGCCTCTCTGATCTTTGATACGCATATTTCGGCGGGACCCTA
GTGCGACTAACTGCCATACGGTCATCAATTTAACTTGTCAAATCAATCAA
AAAACTTAAAAACTAATCAAACTCTAAACGATAAAAGTTTGATTTATATA
AGTTTTATATAAGTGTTGGATTGTAGTTTGATAATTTAAAAAACCCAATT
TTGTTAAACAAGTACATGTCACTCCTTGGAATATCAGCTTCTGTTTTCAA
AGCTAAATTCCATTACAATTTTTACCCCGTATTTTAGAAAGGAAGGGCAG
CATCTGTTGACAACAAAATAGGGGCCTACAGTAGCTAGGATCTTGAACCG
ACAACCCTTCCCATTTGTACGTACACTCATTTTATATTTGATTTCTGAGT
ATGGGAAAATTTAATGCTAACAGCTGTTATGGGGAGAACTTCAATTCAGG
GGGTACTTAGGCCAAAATACCGTAAGTTGGTCTAATATCGACATCCCTCG
TCTAATTTCGACACCCTTCTTTAGAGACAGGAATAATATTGCTGATTGAA
AAAGGATTATTCCTTTCTGACCACTAAGCAAAGAAAAACAGTTTCAACTT
TTCTATCAATTTCAGCTGATTTAAAAAGGGTGTCAGAATTAGAGGAGGGA
TGTCGACATTAGACTAAGTTACGGTAGGTGCTGGGTATATTCGTCGTTCA
CATGACTAAAAGTTCAATCTCAAAATTACTGTCAACTGCTCTAACTTGGG
ACTATCTGACAAAACATGGGACGGCAATTTGGCCACCATTTCAGCCACCA
TTTCACTGAACCTCCAAAGTCATTTGATTTGAGTTAATGAATGAACAGCG
TATAAAAAAATACATGAGGCANTATAAACGATGAAAATTAAGTATTTGAA
TAATCGCACGCTAGACCACTATAAATCAAAATCTAGGCGTGCGATGATCA
CACGTGAATTTTTCTTATGCTNAAAAAATTTTTGTTTCCGGTCCACCGGC
CGGGTGAAAATTTATTTCGTCGTCACCCGGCCGCATTTTTTTTCGTACAT
CATCGTTAGGGTTACTTAGGGTTAGTTTGTTTGTTTGGAAAACTTTCGTG
AATCAGTTTTTGAGGCGTGTGATTTATCGCAGGTGATATTTTATATTCTA
CTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTGAGGCGTGTGATTTATCGCACGTGATAT
TTTATATTCTACTGTAAAATGCACGCCTAGAAATCACTTGGAATGAAGGT
TTTATCCTGATCATTGTTAATATAGAAATGAAATTTTATTCATCTCAAAC
TAAACCCTGCATTGTTTTTGTTAATTCTTGCTTGCAACTCAACTTTTAAG
AATGTTTTTTTTATATAAAACTTGGTTTTTATGAAAGAATCATGCTGATT
TGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATTTAGCA
AAAAAAAATTTTTTGCGGCCGGCCGGGTGAGTGTTTTTTTCGTCACCCGG
TGGACCGGAAACAAAAATATTTTTAGGGTTCGCCTGATTTCTCTTTCGTA
CCGAGTAGGCTTTTAAATTGAAATATGAAAAATCCGTAGTGGAACACGAT
GGAGCGTATGTATGACGTCACTCACGCGGCAAGTTACACCATAGTTTCTA
GAGGGGTCAAGACCCCCCCCTTAGGTAAGAGGACCTCCCCCTTAAGTGCT
AACCCCCCTTCGGAAATTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CCCCCCCTAAATGTTGTAGGGGGGTAGAAACTATGTACACACTCGTTATT
TGTTAATCTCATCAGGCAATAGGGCGCGCTATCAGTGAAATTTATCATGA
CATGTTGTGCCAGAAAGTATGATTGATAAACTTGGTGGAGTTATCAAAAC
AAATTTGTTGTCAAAGAGATTTTTAACAGTAACTGAAAATACAGGCCAGA
TTATCAACAGTCCCATGTTTTGACCAATCGTCCCAAATTAGAGCAGTTGA
CGGTAGTACCTTTACAAAATTTAAAGTTTTACTATGGTTCATCTTTGAGA
TTGTCCTTTTTTCATGGAGAGGAATAGTCAATGTTTACATATGACAAAAA
GGCCAATCTCAAAGGCAGAACAGAATTGCAAGATTTCCAAATTTTCAAGA
CACTTATTTTGAGATTGAACCTTTAGTCATGTGGACGGTGTATGTGCATG
TCTTGAGGGTCAGTTTTTTCACCTTCCAAAGTCTCTCTAAAGGTCGGAAA
AATCATGAAGTTTTAAATTAGTCTCTCTAAGGGTCGGAAAATTCAAGATT
TTTAGGAGATTTTTTTTGATTTTTTACGATATAGGAATAAATGATGGACA
AATTTATTTTCTAAATTTGATTTATTATTTCAATATGAGCTGATTAGGGA
GTGGTCAGAAAGTATCTACTAGGGTGGGGTGGAGGATATTTTCAAAAATT
CCAAAATAAATATGCACCACCCCCCTTTGATATCCCAAAAGATTTTCAAG
CCTCCCCCTAATAAGCTCACAAAAGTGCAGAAAGCTTGAAATTTCATGGC
ACAGAAAGTTTTCTTTGTAATTTTGGTGTCAAAGGGGAAAACTTTGGTCT
TAGAAAAGTCAAACAGCTTAAAGGAGGTCTTAAAAAGGTCAAAAGTAAAC
AAGAAACATTTGAAATCTATATTAATGAGAAAAAAATTGGAACCCCTCCC
CCCTAGTTAGTAGATACTTTCTGACCACTCCCTTACATGACTTGCATTTG
AGGATAAAGTTGATTTCAACAGCTAAGATGGCTATTTAAGTATATATCTA
AGAAATGCTGTCTTCAATAAAGATTCAATAAAAAAATTAAAAATTTTTAT
TTTTTCAGATTTAAAAGCATTTGAAAGACGGTTGGTAGAACATATTAACA
ACCTTGGACCAAAAGCCAGCTTTTGGAAAGGTTTGCTTTAAAAAATATAT
ATTTTTGTTTAAAACTATGGATTAGTTTTGTTGATACATATAAAGCTGCT
TCCTGATCTTGCAAAAGCGATGCAAATAATTTACTTGGACCATCAAAACT
GTAGACCATCCGTTTTTAAAATCTTTTTTCAACATTTTCAACGTCTAAGC
ATTCTATGGCCTGCTTTATATGATTTTAGAAAGAAAAGATTGTCAAGTAG
AACAATCAACTGACATGTTGTGCGCTGATTTGTTTAGATGATTCGTTTAA
ACAATAGCAATGTTTTCGAAAGTTCAGCAGATATTTCATAGCGAATCCGA
CCTCCTTTTAAATACCATTATCATTAACTTAGTTTTTACTAATGTAACCT
TTTACTCTGAATTTCTTATTTTTCAGTGGTTGTGCTCATCACATTTCTTG
TGACTGCATTTACTGCTTCACAATGGGCTCTTGACCAACAAACTGTAGAA
GTAAGTTTAACCTTCAGTTCGAAAATTGCATAGCATCGCAGCGCTGTGAA
ATTTCCCAATTTCAGCATGGTCGAATTCTGCAACCTAGCTGAGTTTTCTT
ATCAGCTTGGAAAATTGCAGAACCACAGTGTTACAAAATTCTGAAATGTT
TGTGTTGTCAAATACTACAACGTTTAAATTTTGCAGCTTTTTCGTTGAGA
AAATAAGACAACACTNCCCCCTAGTTAGTAGATACTTTCTGACCACTCCC
TTACATGACTTGCATTTGAGGATAAAGTTGATTTCAACAGCTAAGATGGC
TATTTAAGTATATATCTAAGAAATGCTGTCTTCAATAAAGATTCAATAAA
AAAATTAAAAATTTTTATTTTTTCAGATTTAAAAGCATTTGAAAGACGGT
TGGTAGAACATATTAACAACCTTGGACCAAAAGCCAGCTTTTGGAAAGGT
TTGCTTTAAAAAATATATATTTTTGTTTAAAATTATGGATTAGTTTTGTT
GATACATATAAAGCTGCTTCCTGATCTTGCAAAAGCGATGCAAATAATTT
ACTTGGACCATCAAAACTGTAGACCATCCGTTTTTAAAATCTTTTTTCAA
CATTTTCAACGTCTAAGCATTCTATGGCCTGCCTTATATGATTTTAGAAA
GAAAAGATTGTCAAGTAGAACAATCAACTGACATGTTGTGCGCTGATTTG
TTTAGATGATTCGTTTAAACAATAGCAATGTTTTCGAAAGCTCAGCAGAT
ATTTCATAGCGAATCCGACCTCCTTTTAAATACCATTATCATTAACTTAG
TTTTTACTACTGTAACCTCTTACTCTGAATTTCTTATTTTTCAGTGGTTG
TGCTCATCACATTTCTTGTGACTGCATTTACTGCTTCACAATGGGCTCTT
GACCAACAAACTGTAGAAGTAAGTTTAACCTTCAGTTCGAAAATTGCATA
GCATCGCAGCGCTGTGAAATTTCCCAATTTCAGCATGGTCGAATTCTGCA
ACCTAGCTGAGTTTTCTTATCAGCTTGGAAAATTGCAGAACCACAGTGTT
ACAAAATTCTGAAATGTTTGTGTTGTCAAATACTACAACGTTTAAATTTT
GCAGCTTTTTCGTTGAGAAAATAAGACAACACTTGCCTTTGAACCAAGAA
TAGAGTCGAAGGGTGATGTATAGGGTCTCGAAATTCATGTGCATTTTGTA
GAGCAACCCAAAAGTAAACTCTTTATCCTAGGATTTTAAAGGATTTAAAC
AATTGGTCCGTGTTTATAATAATTTTTAACACAAGCTTCAATTGGAATTC
GTTGTGTATAATTGCACACTGCTGTGGAAGCATCGCAAATAATTACAAAT
TAAACTATGCAGTTTGCCAAACTCCTTTAATAAATCACATGCATTTAAAT
AAACTTTCCAGATCTTTCCGACAATGTTTCAACGTGTAACATATAGATTT
TTAAATATTTTGTGTTGAATGGTCTACTGTAGAATCTAATAACATTTTTA
AAACTTTTTTATTTTACCAGCAATGTAAAATTATATCATAAAATTGTTAA
TCTATGTTACTGTTGGCTGTTTGATGCAATGAAGTACTCTCTTTTTTTTT
GAAAGTTCCCTCTTTTACCCTAATTCTGCTGTATTAGCCNNNNNNNNNNN
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NNNNNNNNNCAAACCCCCCGCTTATTCCAAACCCCTCGGCTATTAGGTAC
CCGAGAGTATCTATCTTTATTCCAACTGATCTATTTATTTTATTTTTTCA
GTTATCGTTTTGGCAATCGTTATGGAACCATCCCAGTTTCTTTTGCAGCA
TTGTTGCTATATTCATCTTATTTCTTCTTGGTGTTCACAAACGTATTGTC
ATCAAAACAATGTATCCTTTCACAACAAATCGAACCGTGTCTTTTTATGA
TAAGCTCCTTATTACTTTCGTTTTCAACCACACTGTTAGTGTAATTAGAC
AAATTCCCTTTTGAGAATTTTTTCTATTCATGGTTAGACCAACCTCTAGA
CAATATGAAAAGAAAATTTTCATCAAAAATTCTGCATAAATCCTTACAAA
ATGCTTTTTTGGGGCACTCCTTATAAGGATTAATGCTAAATTTCAAGATT
TATTCCCGTACGCGCCAAATATAGCGGCGCCGTCTCAGTCACTCCAGCAT
GACCCTGCTACTTATAAAGTGGAACTGAAGCCCCTTTCATTCTAGCTTTT
TCCTTGACTTTCATTTTCATTGAAATTGCAGAATGTTGACACGATGTCGG
AATGTTTTAGAAGATTTCAATATGTCTTGTGATGAGGTAAGGAGGCGGTC
ATTGAAATTTAGTTTTTCAATCATATTTGTGCTCAGTTACTGACAAAGCC
GCAGGTAAAGGGATAGGGATTAGTTTGGTTATTTTCATCGTCATCTTTCA
TCATCATCTTTCATCATTTTTCGACCGCCAATTGGTGACGCGGTGTCTCA
TCTATTCTGAGTTCAGTGCTCCTACTCACTGTTTGTGCAAAAATGAGTTT
CCTTGGACATTGTTCTGGTATGATCTCAGAAGAGGGTAACATGTAGAATC
AGTTATTACTTTTCGCTGATTGATTTCAAGAGTTGTGGTCTCTCAAGGCA
GTTTCCAGATAATATCTTCTGTGTCGACCGTGCTGTTATGATCTCGGAAG
AGGCACGATGCATTATTAGGGTGATTATTCACCTTATTTCGACTACTGTA
GCATTCGATCACAAATGTTTTTCATTTTGACCTTTTTTAGTTTGCTTTTT
CTTTTTTGTTGCAAAAAGCTACGTGACTTTCTTTGAAATTCAACACCGCT
TCTATTTCCGCACTAATGATAAAAACCAACTAAAAAAATACATGTTTTGA
ATACATGTTCTTTTAAGACACCTCTTTCATAACATCACTTTCCTTTCACT
TTTCGGTTTGCTTTTACAATTTGTACTTAGAAAATCTGCTCTTGACTGTA
TAAGGACTTAAAAAAGCCTTCATATTATATAATGTCACAACCAAGTGTCG
AAATATCGTTCTGCATCCCTTCTGGAGCTTCCACCAGTTCGTCGAGCAGC
TCACCTCTCAGTTGTGATATTATACTTGGAATTTTCCAAAAAAAGTTGTT
TGCTTTGGAATTTAGTTTGCCTAGATCGTCTGTTTTTGTTTGTTGTCCAA
TTATTTTATTTGGATCAATTGTTGAGTAATTGCGATTGGTTGGATATTGT
TTGCTTTGAACAACCAAGAAAGATAAAGCATTGTTTAACTTTGAACAATA
AGACTGTTGGCAGATAGAAGACATGTACATTATTATAGCAGTACTTGGAA
TCATCTTGACATGTGTCTGTCTTGTTTTACATTTCATTGCGATTCGAAGT
CTATGGAAGGAGAAACAAGAGAGAACGAAGCAACGATGCATTTTATTAAA
CATCAACGCGTGTGAAACGATTTTATTATTGACTTTCATACCGTATTGGA
TATCAATATTTCTTGGTATTGAGCACTATCGATTTGTAACGGCATCAATG
GCTTTAAATCACGCCAGTTCTGTCAGTGTAACCCTCATGTTGATCATTCT
TACGGCCGACCGATTTATTGCCTGTTATTCTCCATTAAAGTACCGCACAT
ATGTCACTCAATTTCGTGTCCGTATAGCTCTATTTACATCATGGGTTATC
GGTGGCTCGTCTTTTTTGGTTTCCGGATTTATCCGGTTGTACGGTGGCCC
GAAGATCATTTCGCATAAGACTTATGAGAATATGATACTCCTTGGATTCT
ATGTGAGCTCATTTTTGTGCTGTTTTGTGACTTACGCATACATGTACGTA
GCCTTGTTTTCCATTAAGAAACGTCAGAAGAGCAGGAGAGACCGTTGTAT
GTCTTACGCTATTCAATACCATTGCTCATCCGGTTCAGTACATATTCGCT
TGAAACGTAAATTCGTGATTTTAACATGTAACAATACCCTTAACGGCATC
CAAAGATTAGCTCATCTCGGTGTGTTTGTAACCTTAACTTTTGTTGTCTT
TTCATTGGTTCCCGCGATAACGGCGGGCTTTATCAACTACCATGACGCAT
TTCGGAAAGACGTGAGCTTTCAACGGCAACTTTTGAACTGTACTTGGGAG
ATTAGTTTCTTTACGACTCCCTTGGTGTATGTCTTTGGCGCTAGATGGCC
GAAAGCCGTACTAAGATTGTGCCGTTGTGGATGTTAGAAAATCGATTAAT
AGTTATAATAGAGGTTGAGACATTTTGGATTGTTTTTCTTAAAAAGATTT
TTGAAAATCTCAATTCATGAAGATGTGAAATTTTGATTGAATGGGACAAA
AGTGTTTCAATGTATGTAGAAGCGGTACAATTATTCTAATTAACGGCGGT
TCTTAATATACAAGGGGGATTTGCAAACTTTCTGTTGAAATTGTAACGTA
CTTTTTTTGTAACGAAAAGAACTTTTTGTTGATTACTGAAAGAAAGAACT
TATTGAGAAATATACCGCCTAACGCTCTCTTTCCCTCTTTAAACTGCAAT
TCCCCCGAGAAAAAAAAGGATATTCGGTTGCAAGCTTCTAATACTGTATT
GCAAAATAATATCAAAATGTATTCATTTTTTGGGATAAGGAATATAAAGT
TTAACCAAAGAAGCAAATTAAAAACTCCCAGAAATTGTCATTATAAAATT
TTATTATAATCTTTCCATAGATTGGTCGACTAATATTGAAACCGAGACCA
AAAGAAATGGACATCTATCAACGTTTATATAACCCTGGACATGGTTAAGT
GATGCTAAACAGCTAGTCTCTATTTTTAATACAAAGATTTTTTATGAATT
ATTTCCGGGGTCACCCCTACTTCATGCATGCCGTAGGCATTTACCCCTCT
CCAGCCCCAAAGCCCAATTGAAAAGAAAAAGGGACAATTTGATAATGATA
CATTATTTCATTTTCCAATTGTTCCAACTGATTCGAATCAGATGCATGTT
TAACATCGGGGACGGGGGATGGTATTTTTATATGATTTTTACCGAGTATT
CAATTCTTATGAAAGTTTAAAAAAATAAATAAAACAATAAAACAAAAACC
TTCTTTCCATTTTTCTGCTTTTCAAAACAACTTTATTGCAACGACGTAAT
TAAACATTCTCAATCCATTATTAAATGACATCACTCCTTGACCAATTTTC
CAATTTTCCAATATTCTTTTATTCCAAATGCTATTTGATATCACATGATG
TCAGTTGCACTTAGGGAGTGGTCAGAATGTATCCTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009324XLOC_009324Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016686-exon-sc0000246-1575043694:147573..147672TCONS_00016686-exon-sc0000246-1575043694:147573..147672Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1575043694:140393..140464TCONS_00016686-exon-sc0000246-1575043694:140393..140464Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1575043694:139005..139078TCONS_00016686-exon-sc0000246-1575043694:139005..139078Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1575043694:136312..136421TCONS_00016686-exon-sc0000246-1575043694:136312..136421Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1575043694:135887..135941TCONS_00016686-exon-sc0000246-1575043694:135887..135941Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1575043694:132935..133502TCONS_00016686-exon-sc0000246-1575043694:132935..133502Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1510915933:147573..147672TCONS_00016686-exon-sc0000246-1510915933:147573..147672Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1510915933:140393..140464TCONS_00016686-exon-sc0000246-1510915933:140393..140464Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1510915933:139005..139078TCONS_00016686-exon-sc0000246-1510915933:139005..139078Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1510915933:136312..136421TCONS_00016686-exon-sc0000246-1510915933:136312..136421Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1510915933:135887..135941TCONS_00016686-exon-sc0000246-1510915933:135887..135941Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1510915933:132935..133502TCONS_00016686-exon-sc0000246-1510915933:132935..133502Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1491911889:147573..147672TCONS_00016686-exon-sc0000246-1491911889:147573..147672Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1491911889:140393..140464TCONS_00016686-exon-sc0000246-1491911889:140393..140464Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1491911889:139005..139078TCONS_00016686-exon-sc0000246-1491911889:139005..139078Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1491911889:136312..136421TCONS_00016686-exon-sc0000246-1491911889:136312..136421Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1491911889:135887..135941TCONS_00016686-exon-sc0000246-1491911889:135887..135941Clytia hemisphaericaexon
TCONS_00016686-exon-sc0000246-1491911889:132935..133502TCONS_00016686-exon-sc0000246-1491911889:132935..133502Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000246supercontigsc0000246:132935..147672 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.71842	2.42624	3.26922	3.81089	6.64841	4.92633	5.37079	5.98932	5.371	5.53068	4.34125	4.34714	3.61588	3.40507	3.79362	4.78242	5.36119	5.14053	2.15506	3.07516	3.93507	4.23714	13.1719	12.5035	3.84207	3.738	3.22208	2.53968	8.1312	8.6665
Blast
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BLAST of TCONS_00016686 vs. Swiss-Prot (Human)
Match: NEPR1 (Nuclear envelope phosphatase-regulatory subunit 1 OS=Homo sapiens GN=CNEP1R1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.310e-38
Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = 1 
Query:   82 SMDQAEDLKAFERRLVEHINNLGPKASFWKVVVLITFLVTAFTASQWALDQQTVELSFWQSLWNHPSFFCSIVAIFILFLLGVHKRIVIKTIMLTRCRNVLEDFNMSCDEIGRLILKPRP 441
            S++QAEDLKAFERRL E+I+ L P    W++++++  + TA  A  W +D +T ++SF+ SLWNHP F  S + +  LF  G+HKR+V  +I+  RCR VL ++NMSCD+ G+LILKPRP
Sbjct:    3 SLEQAEDLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHPFFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLILKPRP 122
The following BLAST results are available for this feature:
BLAST of TCONS_00016686 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NEPR13.310e-3850.00Nuclear envelope phosphatase-regulatory subunit 1 ... [more]
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