|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016790 ID=TCONS_00016790|Name=TCONS_00016790|organism=Clytia hemisphaerica|type=transcript|length=2285bp
ATTGAACAAACACCGAGATGTGTTTTGAAGGATTGACAGAAAAGGTGCGA
GCATCAGCATCTGTCGAAATATTGACCAACAGTTTGCGTTATCGTGATTT
GATCCGAAGGAACGAAGAagactttcaaaatttgatgtcaGTCAATGAAG
AGGATTTGGGAAGTTCAGTGCACCACAACAACAACTTCATCCACCAACAT
CAAGATGTCaataaacaacaacaacatcgaTACCGATCAAGTACTATCGG
ATTCAAAGAAGCCGTCAAAAGCAAGTTTACGATCTTTGGCACGTTACTTC
GACCCAGGAAGTTGAGAAAAGGTGTCAAGAAGAAGACACCAAAACGAGGC
GACGAAAACCAATCATCTTCCAAACAAAAAGATGTTGACGTCAGCAAACA
TTCTGAGCCTTTGAACTACAACGACGCCGGGGAACTGGTGAGCGGTCAAT
TAGAGAATCTAATTCATCTGATGACACCCACCAAAGAATACTACCCTGAC
AAGAAGTATATCTTCACCTTCCTGTTGTGCTCAAGATTGTTCATGCCACC
TGCAAGTCTACTCCGCAAACTGGTCGACAACATTAAGGTAGTTGTTGAGA
AAGATAAAAGCGTCGAACAAGAAGTATTCCGCAAATTCGTTAATTTGTTG
TTAGACTGGAGTAAACAATTCCCTTACGATTTCAAAGATNCAGACGGTCG
ATTTGAGATAAATCATGACCGATTGAAGACCTTCtctatttaatttttct
tttgtgaaaCATACTCCAATtctttatcatttgtttttgaaatGCTTTAC
TGAAAGGCtctccaaaaaataagaacaatttgaggctcaaagtgccaaaa
caaataagaacagccgagcctcagaaaAATTTTGCTGGTCCTTAAAAAAA
AGTGTNTAGAGAAGTTTAAAGAACTGTTAGCATACGTTGAAAAAGCCAAC
GAATTCCCTATAAACATTGATGAAGAAGAGAAGAACTTCTTTGATATTTG
TCAAGACCCGATTATGGTTGCTGAACAATTAGCTTTGATTGAACTTGAGA
AAATGTCAATGTTGAACGCTGAACAATTTGTTGAGAAGTTCATTGCTGAA
GATATCACGTGCAGTCGATTAGATTTGACTGAATCGAACAAACATTCAAC
CACGCTTGAACTTTACGTGTCGTGGTTTAACCGTTTGAGTTATTTGGTTG
CTACGGAGATTTGTACGTGTCCGAAGAAGCGAGATCGGATACGCCTCATC
AACTTCTTTATAAATGTTGGCAAACACTGCCTTGCCATTGGGAATTACAA
CTCCTTAATGGCCATTATTACAGGACTTAATATGAACGCTGTAGGTCGCA
TGTCTAAAACTTGGCAGAAAGTCAATAAAGGACGGTTCAAGAAACTCGAA
TCTGAAATGCAGCCGGAAGCGAACTTCGCGCAGTAtcggaaaattttgaa
agaaagaatgGAACATAGAGAGGATTTAGTGATTCCAGTTTTCTCGATTT
TCGTCAAAGACATTTATTTCTTGAACGAAGGGATCAAGGATAAACTATGT
AACGGGATGGTCAATTACGAGAAATTCACCCTCCTCTCCAAACAAATGAA
CGATTTCTTATCAAGGCGTAATAAAAGATGTTACTATCTAcgtaatgatg
acgtcatcaaatatttcttggagACACCAGTGCTCGGTGAGAACGGCATT
TATAAATCATCTTTTGAAGTGGAAAAACCGGAGAATAATTTCGAACGTGA
CCGTTTCAAGTCGGTCAGGATGAAGATGGGACAGACGGTCGATTTGAGAT
AAATCATGACCGATTGAAGACCTTCtctatttaatttttcttttgtgaaa
CATACTCCAATtctttatcatttgtttttgaaatGCTTTACTGAAAGGCt
ctccaaaaaataagaacaatttgaggctcaaagtgccaaaacaaataaga
acagccgagcctcagaaaaattttgctggtccttaaaaaaaagtgtatgt
caAATACATAATTGCATTGCTCTTGTTAGCTTTCTCCATTGAATGTGACT
CCATTCCTTGCGGTAAATAAGCTATGAAAATTGTGTTGTTTTTCATCCTC
TACATTGAGTTTTCTTTGAAGGCTTCCAAGTCGAGAGGaaagattttatg
attttattaaaagtaagAATAAAATATATTGTGTAAAAACCTAAAAGTAA
TTATTTATAGAAATTTCATTCCCAAGTTTTTTATAATACTAATGCTGACA
ATTTATTCATATATTTGCTAAGATTTTATGTACAT Run BLAST on NCBI transcript from alignment at sc0000252:142415..151855+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016790 ID=TCONS_00016790|Name=TCONS_00016790|organism=Clytia hemisphaerica|type=transcript|length=9441bp|location=Sequence derived from alignment at sc0000252:142415..151855+ (Clytia hemisphaerica)
ATTGAACAAACACCGAGATGTGTTTTGAAGGATTGACAGAAAAGGTGCGA
GCATCAGCATCTGTCGAAATATTGACCAACAGTTTGCGTTATCGTGATTT
GATCCGAAGGAACGAAGAagactttcaaaatttgatgtcaGTCAATGAAG
AGGTGCTTATTTCTTGTTTGCCTTGTGAACAActcatttcttttttctct
ttttcctttttcttgttCCGTTACAAAAGTTTTAGATATGGAAACAAACT
ACAGCATTGCTATCAGATAGAATAGATACTGAGTTGTTTGTCATCGCAAC
GTTTAACTAGTTGACAGAAATTGCAGGCGACGTGACTTCTTCAAACCAGT
TTACCCGAACTCAAATTCTCTGGGTGGTGGTAACAATGAGCTACGACTTT
TGAGCGATAAAGTCTGTCGATAGTTTCCAGGTCGCGCTTTGGTAAAATAA
CGCAAATTTAATCATAGCCAATATGTGGAAACCTATAAATAGTTTGTTTG
CATCCTAATTTTATCACCTTTGTGTTCTCAAAGAAAGGCTTCCTTATGTT
AAAATTCGAAAACAAAACATGGTTTATAGGCTTTATATAACTTGTACTAT
TTAGGTGAGGGTCCAACCTAATTAGAAAATCAGTTTCGTTTGATTTGTTG
CAGTTTGATTTCTCTGACTTTTTAACAACTGGCATACTGGTTAACTGAAT
TGTTGTGTTTAAGAGCATTTATTTTGCTTGGATAGactaacaaaatattt
aatttgtcGGGAATATCAAAATTCATAATGGATTTTATCTTGCAAGCTGA
TAGATGTTGTATTGTAGCAGATTTAGACACTTTTGTGAAGCTGGCAAAAG
TATTACAAGCTCTTTTTAAGGTAGTAACACAATCTGAGGCTTTCAAGAAA
AGAGATTTTGATTTGctgatttttatcattttgatctatttggtattttt
tttctgataggGATAACCTAAAGAATAGCCTATTGGTTAGGGCATATGTT
TAGTAGGTCCAATGACCTAAACGAaaataaagcttcgatggccaaaattt
tatgaacaaattaagaacattttaaggcatcGAGGACCCTAGAACACCTA
TTTTATTAGTAAAATGGACAAGAATACtcaacaaaatggtgaaaataaga
acatgtttagaacagaaactcaaaaaattaaagttttaaactgtcctata
aaaagcgtgtagattAATTTTTATGACCTCATGGTCACACCGGGTCAGTG
GACGGAGCGGAGATGGTCTAGAGCAAATTGAAATGTCCGTgagtaaaaaa
aaactatagcgagtacctcaccaaaaaccggcaTTTTTCCATTTCGTTTC
TTGGTGAGTTGCACTTGAcgatttttgtaaaagttgAAGCCTTTTCTAGT
GTCTTACACAAATTCGGTGTTTCACTACTGTAGGAGCTTTGAAAGTGTAA
TGTGACGTCAAAAATCGAGTGTTTTTATGGGCTGGAATAGCCGTTACAGT
CTAGTGTAGNGTTACAAGAAAAtaatgcttcgatggccaaaattaagaat
attctaAGGCTTCGGGACCCTAGAACAGCTATTTTGTTAAGTAAAATGGA
CAaatatactcacaaaatggtgaaataagaacatgtttaggcctaaaact
caaaaagtttaggctttcttataaaaacgtgtagattAATTTGGATTAAA
CTTTTATGACCCCATGGTCACACCGGGTCAGTGGACGGATCGGAAAGCTT
TTTCTAGTGTTTTGACACAAATTTGGTTCTTCGCTAACTGTAGAGCTTCG
AAAGTGTAATgtgacgtcaaatatcgaaTTATTGGTTGCCCAAAACCTGG
GCTCTAAATATTCGAAGAAGTCCAATAGCCGTCACCGTCTAGTATAAGCT
AGATATTATACATTTCCGACAAAATCACTAAGAGTTATTTTTACCATAAC
CAGAAGGAAGCGACGTGGTTCGCATATAGCCTTTCTGTCAAGACGGAAGA
CCAAAATTagattaaactttttaaaatcatgagaatttgatttaaaaatc
agtGTAGGAGTCAAGACAACAGTTTCAAAATGAATAAACTAACAATAAGC
GACTCGTGTTGAGACTAATTTGACAAATTAATTATCACCGATTCGGTTGA
TTGTCAACTGTAGCGTGTGAGCAGGAAATCTGCACTGACAAACTAAGGAG
ATTATTGTCTTCTAATTAAATTGTAATTGTAATCACTTTTGGCAGCAACT
TCCCACGTGCTAGATGTTAAGTACATTCTGCAACGTTTCGAAACATTTTC
AGCACCTTGTTTCTGCAATTAGTACTAATAGTCCCTTTTATTGGCCTAAA
ATTTAGTACTACACTTTCGGTTGTATCATTTCTGTATGGGATATCGTGGT
GTGCAgtcgttttttgaaaattaatgcTTCTGGGTGAACTCAGCAAAGCC
GTTTATTTGGTTTCACCTTTAATTGATTAGTTTTGTGTTAAAGAATGTTA
AAGAATGTTTGTTGCTTTGAAATTCCTTTTGAGGTAaggtccaaaaaatt
tgaaatggaaAAGGAGGAATCTATGGTTGTAGACGACCCTATAATCATGA
ACAAAATATTGCACTCAACTTGGTTACACTATTCCCTTTGAGCTGGAAAA
CAAACGAGGAAAGGGCTAGTTTAGAAAACATGTGATACATTTTGTAATTT
ATCAGGATATTTTTTATTCTGTAGGCCAATGTCGCAAGATTTAATGGTTA
ACTATTTCTTTGCTGTACAGGATTTGGGAAGTTCAGTGCACCACAACAAC
AACTTCATCCACCAACATCAAGATGTCaataaacaacaacaacatcgaTA
CCGATCAAGTACTATCGGATTCAAAGAAGCCGTCAAAAGCAAGGTATGAT
TCCCCGTTTTATTTGTATTTAAACGAATTTACCTAAACGATTCCAAGGGT
TATGCAAGTTTTGCGACTTCGAGTAGGAGGAGTTAGTGAATACTGAGGAA
CGATGGAGAATGATGCGTACTTCGAAACGATGTAATATCACTGGCTCTAC
TCAGGAGGATGGCAATCTTTTCCAATTTCATAAGAAACTATTTCCTATgc
taagaaaaaaacaacaacaaaatgaaCTCGTGCgtttatgaatatttttg
agaTGAGTAAGATTTCTACAAACAAACTAACCATGGGAAAGATGACCCTT
TATTTTGGAAGTAGAACAATATCGATAGGAAATGACTTCGAaagatttgg
caaaaaaaagatttttactgAAGGATTTGAATATTCTGTTTCCCAAAATA
GAAATAGTCATAATTTTTTGGCTGCTATAGTGAAGATCTGtcctatctat
ctatctatctgtTTGTCTACCTTTATGTTTAAATTTGTCCATAAGATTTT
TCTATGATGAAAAAAGGTCTGGATTGAGAGCCTGAAATATCGTTTTCGGG
TAACAGTTCATAAAGCTTTCATGTCCAAACAAGATCCTCGTGACAAACAG
TCGCTAAAAAGAATTTCCCAGTCCATTTTATCATATATAGAATTTCACAC
ACGGCAGCCAAATTCGCCTGTTATTTTAGGTAACCCTCTATAAAAAGACT
GACTGTGACTGAGTGGGCGTTGTTACGAGTTCGCAGTCGAAACAAAAACG
aagttctctaattcgattatTATTATTGCCCAAAGTAGCTTATGAAGCAC
GATGCAAGTTCAATTCTCGTTACGTTGAAATTATCGTTGACATGCTATTG
ACGTTCTGATGACAAATGTTTAGAGTGACAAAACTTTCCAATCGCCACGT
TCAAGGCTttaaaattccgcaaattttttctgatttatcatcTACTGTTA
AAGCTTTTAAACGGCCATGGAAGATAACGGTCTCCAGATTAGATCtccct
ttttttaaatctcgTATTTCTGATTCGCTTTACTATGACCATCCAAAAGA
AcctcaatttcaaaatttcagattATTAAAGTTTTTAACATTCCAAATTG
GAAAGTTtggaagaaagaaaaagaagattttatgaAATCTACAACTAACT
CTGTCTGCTAAACCTAATTTTTTTGCTCGATTTTATATAACAAGTTTTCT
ATAGCTAACTAATCGAGCTTCTGAATTGAAATAGTTCTTGAGAAAAGGGA
ACTTGACTATCAATAAGCACCGCCTTCCAAAAGTAGTCGTTTACGTGTAC
ATCAGGAAGTACTCGAAGAGTCTAGTTATCGGGCTTTCAAATCGATAATC
CGGAGTAATCGGATTTACGATGTTTGTGTAACCGAATTTCGAAAATACAA
CCTTTTTCCTCAAGTTCTTTAATGTTTTAAAGCATCACATCAGCATTTAC
AGATGTGCTACATGTTTTTTCGTTATAACGtttatagggggggggggttc
gaaataccgttttcccgtcaaaatttttgctgaatcccggaatcccgaaa
atcggaaaaacaataacaccgtcacaccggcttgtacatggcaaaaatgt
acctaaataccgtcactgtctgattttaaaataccgttttcccgtctctt
ttttcgtcaaatcccgtaataccgtactcaAAAacggccaatcccgtcac
accgtaaaagtacaacccccccttTATAAAAAGCATATGCAGACTCAGTT
TACAATGTCAACATGAATGACTGAAAGTTTTCTAACTCTGACTTATTTTC
TCTAACTTCACAAGTCTCGTATTCTTACGAATTTTATCCGTGATTAATCA
AAGAAAATGCATCTATCTTAATACATGACTTGCTCTTGCGAAATTTATTG
CTTCTTACATCATCGATGCATTACGAAGGGTCACACGAATTAAGTAATGG
AGAAATGGAGGGAAAAGGAGTCGTTTCGGATCAAGAATCATGAAATACCT
GTCATCGTTTTATCCCTCTGGAATGTTTATTTAATGCCCTATTCACATCG
GAAATTACATAAAAAGAAACACGAACTCTCTCTATAGCATTTTTTAGTGT
AACTTAAGCTTTAAAAACGAAATTGATACCGAGCTTATGAAATTTTATTC
TTACACCatttaaatatctttgaaaTTCCTTTGCTTTATACAATAAACGT
ATCGTTCTTTATGTGTCTTTGTGTGTGTTTGATATGGTGTATGTTTATTT
TGGCTCGCTTCAAGAGTGAGGAAAGACACAAAATGACAGTTTTTCGATGT
CAGCGTTATTTGAAGAAAGAGCAATCTGAGTAAATATAGAAAAAGAGGAA
AAGTTGAAATAACTTTGAGGTGGCCATTCAATCGAAGAGCTTTAAAAGGA
TAGTCGTGttagaaaaaagaagacattttcAGTGACAAAATGGTTTTgag
cgaaaaagtgaaaatctcaCTCCTAAAAGATGTAAGATTTTAGTTTGAGT
CAAATTAGTGTGCACAAATACTGTAAAGGTATTTTTAAGTCAAAGAATCG
TTCGCAACTTCGAGTGACAGAAACGAACTGACAAGCCTGTACCCTGACAC
TTTCATATATATTCCTCCTTTCTCTCTACAGTTTACGATCTTTGGCACGT
TACTTCGACCCAGGAAGTTGAGAAAAGGTGTCAAGAAGAAGACACCAAAA
CGAGGCGACGAAAACCAATCATCTTCCAAACAAAAAGATGTTGACGTCAG
CAAACATTCTGAGGTTAGCCTTCTTCACATAAAAAAAACTCCCAGCGCCG
TCGTGTACTACCATGGTTTCTGCCTACTTTTTcagtccccccttaaaatg
caattttgtccttaaagaaaactccccccttaaatcgaacaaaaattacc
GGTACCCCTTGTTAGAATGTCCccccttaaaatgaaaaaaaaagaggaaT
CCCCCCTCAGATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNaaattcaataaaaagaaatcatt
gaaaataaactggatcctataatcaaatgatacaaataaaactttttatg
aataaaaccaaacaaaagatGCAGTACCTTACAACAGTTGTGTTTTGTTC
ATATCTTAGGCCTTGTAAATTATCTTTATCATTAGACTTGAACTGGGAAT
GTTTTCTGATTGTAGTCCTAGTTAAAGTTAGGTCGAGNtaaaaatgtcgc
ccaccatggttgggcgacgaagaaaatttttcactttttacaccctcaaa
acagcttaaaacgttatctaattgaggagaataatagtttttatatatat
atttggTCTGTTAAAGGTCATTCTAATGTACATAACTTTCAATATAGCAT
GGTCTGCAAAATAGTGGGTATGAGATTGTGAGCACGAAAACGGGATAGAA
GATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG
CCCTTGATAAAGAATCcccccttatttaaaaaaaatgacaaaaatccccc
cttttttaaaaggcaatttttttgacccccccttattttaagggggggcA
GAAACCATGTTACGTATTCCAGCAATCGTTAGATAATTCCTTAAATTCGC
TAAAGAGTATATGATCTCTCCTGAGCAACTGCATAAATGTTTTTAAGAAA
GCtttttttctgttatttttaaNCTCTCCTGAGCAACTGCATAAATGTTa
ttaagaaagattttttcctgttaTTTTTAGAAGCTTCTTAATAACGCTAG
CAAAAATGTTacaatgaattttaaattccCTCCTTGTTAGTGACAGCAAA
GTATTTTGCATCCCTTGGCAAATTtggatacacatttttttttatcagaa
cacctaaaatttgactgagcctggatgtgcttattttttttagcaatttt
cagtctaaaatgttcttaaatgcgttcttaatttttcagactactctaaa
tcgacgatatgatacaaaataaagagcacttaaatttggcaaaatttgga
caatatttgactatCGACTTTtaaagatccacccctaaattcggttaaaa
ctgcttaaaaagaggaaaaaattgtgNGAGCAGTACTGattcggagggct
catatccatccctaagttcggttaaaactgcttgaaaagaaaaaaaaaat
ttgtttcttgtcatttttttccaaactgaggctgggcatgttcttaagat
gttcttaatttttcgacgaattttagcctatatgttcttataaactaggt
tctaaaaaaaaaaacgtgtatattttaTGCACCAtttcatatttcatatt
tctctcaTTTTAGCCTTTGAACTACAACGACGCCGGGGAACTGGTGAGCG
GTCAATTAGAGAATCTAATTCATCTGATGACACCCACCAAAGAATACTAC
CCTGACAAGAAGTATATCTTCACCTTCCTGTTGTGCTCAAGATTGTTCAT
GCCACCTGCAAGTCTACTCCGCAAACTGGTCGACAACATTAAGGTAGTTG
TTGAGAAAGATAAAAGCGTCGAACAAGAAGTATTCCGCAAATTCGTTAAT
TTGTTGTTAGACTGGAGTAAACAATTCCCTTACGATTTCAAAGATNCAGA
CGGTCGATTTGAGATAAATCATGACCGATTGAAGACCTTCtctatttaat
ttttcttttgtgaaaCATACTCCAATtctttatcatttgtttttgaaatG
CTTTACTGAAAGGCtctccaaaaaataagaacaatttgaggctcaaagtg
ccaaaacaaataagaacagccgagcctcagaaaAATTTTGCTGGTCCTTA
AAAAAAAGTGTNTAGAGAAGTTTAAAGAACTGTTAGCATACGTTGAAAAA
GCCAACGAATTCCCTATAAACATTGATGAAGAAGAGAAGAACTTCTTTGA
TATTTGTCAAGACCCGATTATGGTTGCTGAACAATTAGCTTTGATTGAAC
TTGAGAAAATGTCAATGTTGAACGCTGAACAATTTGTTGAGAAGTTCATT
GCTGAAGATATCACGTGCAGTCGATTAGATTTGACTGAATCGAACAAACA
TTCAACCACGCTTGAACTTTACGTGTCGTGGTTTAACCGTTTGAGTTATT
TGGTTGCTACGGAGATTTGTACGTGTCCGAAGAAGCGAGATCGGATACGC
CTCATCAACTTCTTTATAAATGTTGGCAAACACTGCCTTGCCATTGGGAA
TTACAACTCCTTAATGGCCATTATTACAGGACTTAATATGAACGCTGTAG
GTCGCATGTCTAAAACTTGGCAGAAAGTCAATAAAGGACGGTTCAAGAAA
CTCGAATCTGAAATGCAGCCGGAAGCGAACTTCGCGCAGTAtcggaaaat
tttgaaagaaagaatgGAACATAGAGAGGATTTAGTGATTCCAGTTTTCT
CGATTTTCGTCAAAGACATTTATTTCTTGAACGAAGGGATCAAGGATAAA
CTATGTAACGGGATGGTCAATTACGAGAAATTCACCCTCCTCTCCAAACA
AATGAACGATTTCTTATCAAGGCGTAATAAAAGATGTTACTATCTAcgta
atgatgacgtcatcaaatatttcttggagACACCAGTGCTCGGTGAGAAC
GGCATTTATAAATCATCTTTTGAAGTGGAAAAACCGGAGAATAATTTCGA
ACGTGACCGTTTCAAGTCGGTCAGGATGAAGATGGGACAGACGGTCGATT
TGAGATAAATCATGACCGATTGAAGACCTTCtctatttaatttttctttt
gtgaaaCATACTCCAATtctttatcatttgtttttgaaatGCTTTACTGA
AAGGCtctccaaaaaataagaacaatttgaggctcaaagtgccaaaacaa
ataagaacagccgagcctcagaaaaattttgctggtccttaaaaaaaagt
gtatgtcaAATACATAATTGCATTGCTCTTGTTAGCTTTCTCCATTGAAT
GTGACTCCATTCCTTGCGGTAAATAAGCTATGAAAATTGTGTTGTTTTTC
ATCCTCTACATTGAGTTTTCTTTGAAGGCTTCCAAGTCGAGAGGaaagat
tttatgattttattaaaagtaagAATAAAATATATTGTGTAAAAACCTAA
AAGTAATTATTTATAGAAATTTCATTCCCAAGTTTTTTATAATACTAATG
CTGACAATTTATTCATATATTTGCTAAGATTTTATGTACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016790-exon-sc0000252-1491911889:142415..142566 | TCONS_00016790-exon-sc0000252-1491911889:142415..142566 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1510915933:142415..142566 | TCONS_00016790-exon-sc0000252-1510915933:142415..142566 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1575043694:142415..142566 | TCONS_00016790-exon-sc0000252-1575043694:142415..142566 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1491911889:145185..145307 | TCONS_00016790-exon-sc0000252-1491911889:145185..145307 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1510915933:145185..145307 | TCONS_00016790-exon-sc0000252-1510915933:145185..145307 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1575043694:145185..145307 | TCONS_00016790-exon-sc0000252-1575043694:145185..145307 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1491911889:147946..148077 | TCONS_00016790-exon-sc0000252-1491911889:147946..148077 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1510915933:147946..148077 | TCONS_00016790-exon-sc0000252-1510915933:147946..148077 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1575043694:147946..148077 | TCONS_00016790-exon-sc0000252-1575043694:147946..148077 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1491911889:149978..151855 | TCONS_00016790-exon-sc0000252-1491911889:149978..151855 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1510915933:149978..151855 | TCONS_00016790-exon-sc0000252-1510915933:149978..151855 | Clytia hemisphaerica | exon |
| TCONS_00016790-exon-sc0000252-1575043694:149978..151855 | TCONS_00016790-exon-sc0000252-1575043694:149978..151855 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000252 | supercontig | sc0000252:142415..151855 + |
Blast
BLAST of TCONS_00016790 vs. Swiss-Prot (Human)
Match: RGF1C (Ras-GEF domain-containing family member 1C OS=Homo sapiens GN=RASGEF1C PE=2 SV=2) HSP 1 Score: 290.812 bits (743), Expect = 7.436e-89 Identity = 179/482 (37.14%), Postives = 264/482 (54.77%), Query Frame = 3
Query: 402 SEPLNYNDAGELV------SGQLENLIHLMTPTKEYYPDKKYIFTFLLCSRLFMPPASLLRKLVDNIKVVVEKDKSV-EQEVFRKF----VNLLLDWSKQFPYDFKDXDGRFEINHDRLKTFSI*FFFC-ETYSNSLSFVFEMLY*KALQKIRTI*GSKCQNK*EQPSXXXXXXXXXXXXXXXXXXXXAYVEKANEFPINIDEEEKNFFDICQDPIMVAEQLALIELEKMSMLNAEQFVEKFIAEDITCSRLDLTESNKHSTTLELYVSWFNRLSYLVATEICTCPKKRDRIRLINFFINVGKHCLAIGNYNSLMAIITGLNMNAVGRMSKTWQKVNKGRFKKLESEMQPEANFAQYRKILKERMEH-------REDLVIPVFSIFVKDIYFLNEGIKDKLCNGMVNYEKFTLLSKQMNDFLSRRNKRCYYLRNDDVIKYFLETPVLGENGIYKSSFEVEKPENNFERDRFKSVRMK-MGQT 1787
+EP + AG+ + S LE LI + PT +YYP+K YIFTFLL SRLF+ P LL ++ + DK V ++ RKF + LL +W++ FP DF++ I H LK C E Y + + + L+ K L +R G + ++P ++Y K P +I E +C DP +A+QL +ELE++ + E+FV+ F+ +D S S+K ++ LE YV WFNRL YLVATEIC KK+ R ++I FFI+V + C IGN+NSLMAII+G+NM+ V R+ KTW KV +F LE +M P NF YR L+ RE +VIP FS+ +KDIYFLNEG ++L NG VN+EKF L+KQ+ +F++ + C + ++ + Y P+ E+G+Y +S+E E PEN E++R+K++R +G+T
Sbjct: 21 TEPTDGEQAGQPLLDGAPSSASLETLIQHLVPTADYYPEKAYIFTFLLSSRLFIEPRELLARVCHLCIEQQQLDKPVLDKARVRKFGPKLLQLLAEWTETFPRDFQEES---TIGH--LKDVVGRIAPCDEAYRKRMHQLLQALHQK-LAALRQ--GPEGLVGADKP--------------------ISYRTKP---PASIHRE---LLGVCSDPYTLAQQLTHVELERLRHIGPEEFVQAFVNKDPLASTKPCF-SDK-TSNLEAYVKWFNRLCYLVATEICMPAKKKQRAQVIEFFIDVARECFNIGNFNSLMAIISGMNMSPVSRLKKTWAKVRTAKFFILEHQMDPTGNFCNYRTALRGAAHRSLTAHSSREKIVIPFFSLLIKDIYFLNEGCANRLPNGHVNFEKFLELAKQVGEFITWKQVECPFEQDASITHYLYTAPIFSEDGLYLASYESESPENQTEKERWKALRSSILGKT 466
The following BLAST results are available for this feature:
|
