TCONS_00016859 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016859
Unique NameTCONS_00016859
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1814

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016859 ID=TCONS_00016859|Name=TCONS_00016859|organism=Clytia hemisphaerica|type=transcript|length=1814bp
ttgtttgtttttttcctgCTCCTGATTTCTTCTTTTAGTTAGTGTCCTCC
TTTAACTTTATCCTTTCCTTCCCTTCTTCTGTTCTTTCAGTCTTTCGACA
TTCGAGATGAGAATTTGATTTGGGCTGCTGATTTGACAAAGTTAAAAATG
GTAGGCAAAGATGCAGAGGAAGGCGGCGTTGTCTCGATTAGTCATACGGG
TTGGTTGAGTGAGAAAGTTTATAGAGTCTTTTTATTACTTAGATAAGAAT
ATTAACTCTGAAGACAAAGGAAAAGGCTGTATCACCGTAGTAAAATAAAC
CTTTAGCTTCGCTACCATGTGACAACATGTGGAAAGCACATTGTTTTGAT
TCTCGCAGCATTTACTCAAACTTCCTTCGCCTCCTACTACCACGGAAAAG
TTCGACTTCTTTTATTTATCTACtgcttcttcaaattttgatttttctag
agAAGAAATGACAAGCCTTAATGTTTTACTGGAAGCTGCTAAAGCTGTTG
ATATAGATTCCCcttcaatcaaaagaaaaaggaaCAGCTCTAGCAGATCA
AAAAGAGATATATTGGAAAGAACCCCTGGgGGAGGAAATCGTCAAACTCA
TAACATCTTGGAAAAGAATAGGAGAGCCGAATTGAAGACCTTCttccaaa
aattaaaagaaactGTACCCATCCTACAAAACCGTCCAAAAGCTTCAAAT
GTCAGTGTGCTAACTGAATCAATGAAATATATACAGGAATTAAATGAAAT
TGACAAACAGCATTCACTCGAAATCACTCGTTTAAGAAGATGTCGAATGT
GTCTTGAAGAGCGaattaaaatgttaaaagaagaaattgataAACTACCA
CCTGAAAATAGGCCTAAAATTATATTCAAAGAAACTCCTATCGAACCTGA
AAGGGAAAGTACAGATCATGCTAACCCTTCTCCTACTACTTCGACTGGAG
CGCCTCCTAAAAAGCCGAAAAAAGAAATGGTGTCTATAGAAATTCAAGCA
AATGAGGAAGATATTCGTGATGCATTACCTGAATCGTATGCcgatgaaaa
aacttttgaccaGCCGTTACCGGATGTTTTACCGGCTCACGAAACTTTAA
AGTGTCAGCTTCACACTGAACCCTCTTCTGAAGAAAGGTTGACAAATTTG
AAAGATAAATTGATGCGAAAGCGAGTTTTGGAGTCTATGTTGGATGGCGA
TGAAGATTCTGAAAATGACGAAGATGTATTAAAAATTGTCTGCgaagaat
tgaaaatttgacggaCATGATCAATGCATATCTTtatcaattcttttttc
aaaaataatggtTCCTTTTTGGTTTTGACGGGGACAAGTGTTGGTTAAAA
CCTTGTTTGTGCCAAAGCCTAAGTCAATTTTAGTGTAGTTTTATACACAT
AGAATAAACTTTTCATGGAAATATGGTGATGATATTTCCCCTCTTATCCT
TAATGTCAGTGGCTTAACATGCTTCTCATACATGATAAAAGGGTGATGCT
TTGCAAACCTGGTAAAATGAAATGATTCGATTACATTATTTGACGCTTAT
AATCAATGATTAATGGTAGGCAGGAGTTCATAAGTAAATTGAATTGAAGG
GTTAATATCAAGAGAGCCTTTACTGGAAATCAGTCGTTGTTCAAAATAAG
TGAAAAGGGgatgtttattttgaaattcattgcataatttataatttatt
gTGCTTTTCGATTAGAATTTTATGTGGAAAAGATAATTTATTTACAAAAC
GGCGTTCACTTGCAAAAGAAAACTTGAATTCAATATTCGTTGACTATGTT
GAAAAAGATTGATC
Run BLAST on NCBI

protein sequence of TCONS_00016859-protein

>TCONS_00016859-protein ID=TCONS_00016859-protein|Name=TCONS_00016859-protein|organism=Clytia hemisphaerica|type=polypeptide|length=267bp
MTSLNVLLEAAKAVDIDSPSIKRKRNSSSRSKRDILERTPGGGNRQTHNI
LEKNRRAELKTFFQKLKETVPILQNRPKASNVSVLTESMKYIQELNEIDK
QHSLEITRLRRCRMCLEERIKMLKEEIDKLPPENRPKIIFKETPIEPERE
STDHANPSPTTSTGAPPKKPKKEMVSIEIQANEEDIRDALPESYADEKTF
DQPLPDVLPAHETLKCQLHTEPSSEERLTNLKDKLMRKRVLESMLDGDED
SENDEDVLKIVCEELKI
Run BLAST on NCBI

transcript from alignment at sc0000253:291217..296698+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016859 ID=TCONS_00016859|Name=TCONS_00016859|organism=Clytia hemisphaerica|type=transcript|length=5482bp|location=Sequence derived from alignment at sc0000253:291217..296698+ (Clytia hemisphaerica)
ttgtttgtttttttcctgCTCCTGATTTCTTCTTTTAGTTAGTGTCCTCC TTTAACTTTATCCTTTCCTTCCCTTCTTCTGTTCTTTCAGTCTTTCGACA TTCGAGATGAGAATTTGATTTGGGCTGCTGATTTGACAAAGTTAAAAATG GTAGGCAAAGATGCAGAGGAAGGCGGCGTTGTCTCGATTAGTCATACGGG TTGGTTGAGTGAGAAAGTTTATAGAGTCTTTTTATTACTTAGATAAGAAT ATTAACTCTGAAGACAAAGGAAAAGGCTGTATCACCGTAGTAAAATAAAC CTTTAGCTTCGCTACCATGTGACAACATGTGGAAAGCACATTGTTTTGAT TCTCGCAGCATTTACTCAAACTTCCTTCGCCTCCTACTACCACGGAAAAG TTCGACTTCTTTTATTTATCTACtgcttcttcaaattttgatttttctag agAAGAAATGACAAGCCTTAATGTTTTACTGGAAGCTGCTAAAGCTGTTG ATATAGGTAAGATTACTTAACTATGGTTTTATTATTAGATTTTAgatcta aaaaaagtttttgaaaagcaCATGGTTCGGGTTCGAAGCACGTGGCAACG TGGCGCCATTTTTTGGATACCAATATTTTATACTTTTACCTTTTTCTAGA TTCCCcttcaatcaaaagaaaaaggaaCAGCTCTAGCAGATCAAAAAGAG ATATATTGGAAAGAACCCCTGGGTAGGAAACTAATTTTATGATGTTTGTA GTGCTATCTctgtttctatttatttttaggcattttttgaCTTGTATAGA GGGGTCCCCCANTCCATCTCTGTTTCTATtcatttttaggcattttttta CTTGTATAGAGGGGTCCCCCAGCGGTTATGTGTGAATGCATGAATGAGCA TTTTCAATTGCATGAATGCGTGATAATTGAATAAAAGTGCGTGAATTCGT GACTTGAAAAAACTTGCATGAACgtgaaaaaacactttttgattgcgGGA ATGCGTAAATCTGGGCTATtatgcgtgaatacgtgaattttccttttttt ccacCGATTATGTGCAGTTCTCctaattttcgaatgtttcccCAATTTCT TTCCGAAAATGTTCTGATTGTCTGAGAAATATAGGgtggttattgcgtga aactcgaggaaaatttgcgtgaatgcttGAATTTCGATGAAGTTCTAATG CTGCCTTGCTTTTTCTTGTATTTAACATTTCTGtctttaattatttttta ggGGAGGAAATCGTCAAACTCATAACATCTTGGAAAAGAATAGGTATGAA TAATTTGCCTTGTAATAAACTCAATCTATATTAACTCTGCTGAATTTACT GAATCTGTCATTGAGCACTAAGGATATTTTATCTCAATTTGGGGTTAGTC TAAAAATCAGGGTAGCTAATAATTTAgctagccaattgggctaggcagtt gggtgtttaagataaaaacggcaattattgctgtttttggaaagaaaagt tgattttataatTGAACACATGGTAGTAGATAGCTTAGAAAGGTTAAAAA gactttcttaaatttttgatgatggattgtagataaacccttttcatTTA GAATTGACTAGACGATTCCCGTCGTCacaaacgccggtttagcttgcgca tcaaaagcccttaggatgaCAAAGATGGTATTGTTGATGCTGTCTCTAAC TTTATCTTGAAGGGGGAtttgaattacttttttattgacCACGGGAGTAT AATGAGAAGTGTTACTTAAGATGTCTTGTAAATACCTTTTCATGCttcaa ttaaataaaataagAGAATGGGACTTGAAATCTTCACCATAAATATATGA GCTTAGTAAATAATAAACCTTcaattatgagagtttcttcagGAAGTTTG AAAGCGATTTTAATTAAATCGAAAACGGGAACTTAATTGAGTTATAGTCA AATTAAGAGCTTCAATATATTATCAGTGAATAAGATTGGAAAAGATATAT AAAAATGTTGCTATATTTACAAATTTCAGGTTGACATGATGCGCCTTATA ACACAAAATAATAaatactttgatttcaaaacaatcttTTATCCACTTCT CGATCGGAAGACCTCTGTTTTTTACCTGTGCAttgactaccttatcggcc ctttctTCCAATTAGGGCCAGTTTATCGGCATTTTTGGGCTCACTTAGTG TAATAAGAGCCGGTGTAAAAAAAGctaagattttgaaattttaaactaAA AGCGACATTAATTTTTTagcattatttctcaatttaaaggattttaggta tgattggAAGACGAAAGTTATCCAtcgttttactccatatttaaaacttc agtgaaatatttaatatatttaaaaatcagtgattttcgatagaattttc aacagttttctACTgactaatttgaagcataagtagccatttttacaaat cttGGCATTATTAAcagccctaattggcgtaagcccaaaattaggctgtg gcgtaataagggccggcgtaaaaggggctgGTGTTAAATTTGAGTCTGCG TAAAAAGGGCAGATAAGGTATTTTAAACtgtatttttacaaaatctttGG TAGAAAGTACCACGCCTTctaaagttcgaaaatctaagTCACTTGGTGTT TTaaataattgacgtcagagttattttcattaaaaagtcaCTGTATGGGC TTCTTCGATTCGAACGTCAAATCCTTTTTTGGACAGGGCTTTTATCAGAA GGTAGTGCTAATTTACGAGCTCAATCatagataaaaatgaaatttcaaac atAAAATTCAAACCACGACGTATCATCAACTGCTTTTTCAAAAGACAATA AgatttttttgtcttaaaactGCACGAAAGCCGTCTTTCATACTCGAATC AACCCcctggcaaaatttgagaataacagctcagctaccatcttgcgtta cacacatttttcataaactcatttattATGACATATTGTTTTAAGAAGTT CCTCCTCTGAGAGTGGGAATTCGCTCAGCCTACACCAAGGTTTTCTCTAG CATCCGCAGGTAGCAAGAATAAAGCCTGGGATGCACGGGGACAATGTTGA GTACTTGTTAAAGTCAACAAGGATATCTCAATTCCTGCTTAAGTGACCAC TATAATTCACTAGGACAGTCTTAACATACATTAAAATAAGTGCATTAGAA TGAGAATAGCTGTTTTCAGATGAGgttttaaatttcaacaaagAGGCAAC TAGCCATTtcccaaaagaaattttgctatAAAGTGCTGAATTGAATATTT TACTGAttttattgtgttttttttggaaaattctttcTTAGGAGAGCCGA ATTGAAGACCTTCttccaaaaattaaaagaaactGTACCCATCCTACAAA ACCGTCCAAAAGCTTCAAATGTCAGTGTGCTAACTGAATCAATGAAATAT ATACAGgtattactttaggcgtacaaacttttgcaagCAGAAACTTTAGC GAATTTTTAATTGATTAATTCAAGATGAAAGACCCctaaaaatctttgta aattgtggctaattttgtaatttcaaaaaattttaaatcgggattttttc aaaaaccccTGGGGAAGTGAGAGAAATAATTTGCAAAAGAGgctgatttg caaaattttgtccATACAAAGATCTTAGTTCTtcaattcacaaaaaaaaa tccaCATGAAAATTAACTCACTGAAGGATTTTGAACCCTACTTTCAGTAA TTGAGCCATTACCAGGATTTCTCAGACAACCttcataatatttttaaagC TAGTTATATAAGTAACTTGAGAGTTCCGACTAAGATTGAATTTTAACTGA TTTTCAGATGCCAAATCGATAATCATGGAAAGGTTTTCAAGGCTTCGAGA TGTAGCCTCACATTATATTGATTTTAAACCAAAAAATtagcaaagttgat ttcaaGCAAACACTCAGTACAATAGATTATTTTaatcaaattatcaaaaa acTATTTATTATACATGAATTACTTAAAAAGTTTCGAAAGAGTATCAATG AAGGTTCCTTTATCAGCCTTTATGTGAAATATGTTTATGTTCAATAAATA TGTCTCATCGTGGGTATTGGCATACTAATGCTGGGCTAGCGCTCTAGTGT GAGCGTTTCCCAAATATTGTTGACTCAACATGTTCGGGTCTTTCAGtcga aacaaaacctttaaattcccaaattttctattttagaccaaaatctttga aaatattctaaaatttgACAACATCCTTAAAAAGCTATCCACAAAATTTT AGTATTCAGGCCAACACTAAACTAGAAAATAATAGGGTTCCAATCTTGTT GTGATAGGAACTTTGCTAACCTGGCTTTGCTATGATTATCCTATTTTGTT TTAGGAATTAAATGAAATTGACAAACAGCATTCACTCGAAATCACTCGTT TAAGAAGATGTCGAATGTGTCTTGAAGAGCGaattaaaatgttaaaagaa gaaattgataAACTACCACCTGAAAATAGGCCTAAAATTATATTCAAAGA AACTCCTATCGAACCTGAAAGGGAAAGTACAGATCATGCTAACCCTTCTC CTACTACTTCGACTGGAGCGCCTCCTAAAAAGCCGAAAAAAGAAATGGTG TCTATAGAAATTCAAGCAAATGAGGAAGATATTCGTGATGCATTACCTGA ATCGTATGCcgatgaaaaaacttttgaccaGCCGTTACCGGATGTTTTAC CGGCTCACGAAACTTTAAAGTGTCAGCTTCACACTGAACCCTCTTCTGAA GAAAGGTTGACAAATTTGAAAGATAAATTGATGCGAAAGCGAGTTTTGGA GTCTATGTTGGATGGCGATGAAGATTCTGAAAATGACGAAGATGTATTAA AAATTGTCTGCgaagaattgaaaatttgacggaCATGATCAATGCATATC TTtatcaattcttttttcaaaaataatggtTCCTTTTTGGTTTTGACGGG GACAAGTGTTGGTTAAAACCTTGTTTGTGCCAAAGCCTAAGTCAATTTTA GTGTAGTTTTATACACATAGAATAAACTTTTCATGGAAATATGGTGATGA TATTTCCCCTCTTATCCTTAATGTCAGTGGCTTAACATGCTTCTCATACA TGATAAAAGGGTGATGCTTTGCAAACCTGGTAAAATGAAATGATTCGATT ACATTATTTGACGCTTATAATCAATGATTAATGGTAGGCAGGAGTTCATA AGTAAATTGAATTGAAGGGTTAATATCAAGAGAGCCTTTACTGGAAATCA GTCGTTGTTCAAAATAAGTGAAAAGGGgatgtttattttgaaattcattg cataatttataatttattgTGCTTTTCGATTAGAATTTTATGTGGAAAAG ATAATTTATTTACAAAACGGCGTTCACTTGCAAAAGAAAACTTGAATTCA ATATTCGTTGACTATGTTGAAAAAGATTGATC

Coding sequence (CDS) from alignment at sc0000253:291217..296698+

>TCONS_00016859 ID=TCONS_00016859|Name=TCONS_00016859|organism=Clytia hemisphaerica|type=CDS|length=4020bp|location=Sequence derived from alignment at sc0000253:291217..296698+ (Clytia hemisphaerica)
ATGACAAGCCTTAATGTTTTACTGGAAGCTGCTAAAGCTGTTGATATAGA
TTCCCcttcaatcaaaagaaaaaggaaCAGCTCTAGCAGATCAAAAAGAG
ATATATTGGAAAGAACCCCTGGgGGAGGAAATCGTCAAACTCATAACATC
TTGGAAAAGAATAGGAGAGCCGAATTGAAGACCTTCttccaaaaattaaa
agaaactGTACCCATCCTACAAAACCGTCCAAAAGCTTCAAATGTCAGTG
TGCTAACTGAATCAATGAAATATATACAGGAATTAAATGAAATTGACAAA
CAGCATTCACTCGAAATCACTCGTTTAAGAAGATGTCGAATGTGTCTTGA
AGAGCGaattaaaatgttaaaagaagaaattgataAACTACCACCTGAAA
ATAGGCCTAAAATTATATTCAAAGAAACTCCTATCGAACCTGAAAGGGAA
AGTACAGATCATGCTAACCCTTCTCCTACTACTTCGACTGGAGCGCCTCC
TAAAAAGCCGAAAAAAGAAATGGTGTCTATAGAAATTCAAGCAAATGAGG
AAGATATTCGTGATGCATTACCTGAATCGTATGCcgatgaaaaaactttt
gaccaGCCGTTACCGGATGTTTTACCGGCTCACGAAACTTTAAAGTGTCA
GCTTCACACTGAACCCTCTTCTGAAGAAAGGTTGACAAATTTGAAAGATA
AATTGATGCGAAAGCGAGTTTTGGAGTCTATGTTGGATGGCGATGAAGAT
TCTGAAAATGACGAAGATGTATTAAAAATTGTCTGCgaagaattgaaaat
ttgaATGACAAGCCTTAATGTTTTACTGGAAGCTGCTAAAGCTGTTGATA
TAGATTCCCcttcaatcaaaagaaaaaggaaCAGCTCTAGCAGATCAAAA
AGAGATATATTGGAAAGAACCCCTGGgGGAGGAAATCGTCAAACTCATAA
CATCTTGGAAAAGAATAGGAGAGCCGAATTGAAGACCTTCttccaaaaat
taaaagaaactGTACCCATCCTACAAAACCGTCCAAAAGCTTCAAATGTC
AGTGTGCTAACTGAATCAATGAAATATATACAGGAATTAAATGAAATTGA
CAAACAGCATTCACTCGAAATCACTCGTTTAAGAAGATGTCGAATGTGTC
TTGAAGAGCGaattaaaatgttaaaagaagaaattgataAACTACCACCT
GAAAATAGGCCTAAAATTATATTCAAAGAAACTCCTATCGAACCTGAAAG
GGAAAGTACAGATCATGCTAACCCTTCTCCTACTACTTCGACTGGAGCGC
CTCCTAAAAAGCCGAAAAAAGAAATGGTGTCTATAGAAATTCAAGCAAAT
GAGGAAGATATTCGTGATGCATTACCTGAATCGTATGCcgatgaaaaaac
ttttgaccaGCCGTTACCGGATGTTTTACCGGCTCACGAAACTTTAAAGT
GTCAGCTTCACACTGAACCCTCTTCTGAAGAAAGGTTGACAAATTTGAAA
GATAAATTGATGCGAAAGCGAGTTTTGGAGTCTATGTTGGATGGCGATGA
AGATTCTGAAAATGACGAAGATGTATTAAAAATTGTCTGCgaagaattga
aaatttgaATGACAAGCCTTAATGTTTTACTGGAAGCTGCTAAAGCTGTT
GATATAGATTCCCcttcaatcaaaagaaaaaggaaCAGCTCTAGCAGATC
AAAAAGAGATATATTGGAAAGAACCCCTGGgGGAGGAAATCGTCAAACTC
ATAACATCTTGGAAAAGAATAGGAGAGCCGAATTGAAGACCTTCttccaa
aaattaaaagaaactGTACCCATCCTACAAAACCGTCCAAAAGCTTCAAA
TGTCAGTGTGCTAACTGAATCAATGAAATATATACAGGAATTAAATGAAA
TTGACAAACAGCATTCACTCGAAATCACTCGTTTAAGAAGATGTCGAATG
TGTCTTGAAGAGCGaattaaaatgttaaaagaagaaattgataAACTACC
ACCTGAAAATAGGCCTAAAATTATATTCAAAGAAACTCCTATCGAACCTG
AAAGGGAAAGTACAGATCATGCTAACCCTTCTCCTACTACTTCGACTGGA
GCGCCTCCTAAAAAGCCGAAAAAAGAAATGGTGTCTATAGAAATTCAAGC
AAATGAGGAAGATATTCGTGATGCATTACCTGAATCGTATGCcgatgaaa
aaacttttgaccaGCCGTTACCGGATGTTTTACCGGCTCACGAAACTTTA
AAGTGTCAGCTTCACACTGAACCCTCTTCTGAAGAAAGGTTGACAAATTT
GAAAGATAAATTGATGCGAAAGCGAGTTTTGGAGTCTATGTTGGATGGCG
ATGAAGATTCTGAAAATGACGAAGATGTATTAAAAATTGTCTGCgaagaa
ttgaaaatttgaATGACAAGCCTTAATGTTTTACTGGAAGCTGCTAAAGC
TGTTGATATAGATTCCCcttcaatcaaaagaaaaaggaaCAGCTCTAGCA
GATCAAAAAGAGATATATTGGAAAGAACCCCTGGgGGAGGAAATCGTCAA
ACTCATAACATCTTGGAAAAGAATAGGAGAGCCGAATTGAAGACCTTCtt
ccaaaaattaaaagaaactGTACCCATCCTACAAAACCGTCCAAAAGCTT
CAAATGTCAGTGTGCTAACTGAATCAATGAAATATATACAGGAATTAAAT
GAAATTGACAAACAGCATTCACTCGAAATCACTCGTTTAAGAAGATGTCG
AATGTGTCTTGAAGAGCGaattaaaatgttaaaagaagaaattgataAAC
TACCACCTGAAAATAGGCCTAAAATTATATTCAAAGAAACTCCTATCGAA
CCTGAAAGGGAAAGTACAGATCATGCTAACCCTTCTCCTACTACTTCGAC
TGGAGCGCCTCCTAAAAAGCCGAAAAAAGAAATGGTGTCTATAGAAATTC
AAGCAAATGAGGAAGATATTCGTGATGCATTACCTGAATCGTATGCcgat
gaaaaaacttttgaccaGCCGTTACCGGATGTTTTACCGGCTCACGAAAC
TTTAAAGTGTCAGCTTCACACTGAACCCTCTTCTGAAGAAAGGTTGACAA
ATTTGAAAGATAAATTGATGCGAAAGCGAGTTTTGGAGTCTATGTTGGAT
GGCGATGAAGATTCTGAAAATGACGAAGATGTATTAAAAATTGTCTGCga
agaattgaaaatttgaATGACAAGCCTTAATGTTTTACTGGAAGCTGCTA
AAGCTGTTGATATAGATTCCCcttcaatcaaaagaaaaaggaaCAGCTCT
AGCAGATCAAAAAGAGATATATTGGAAAGAACCCCTGGgGGAGGAAATCG
TCAAACTCATAACATCTTGGAAAAGAATAGGAGAGCCGAATTGAAGACCT
TCttccaaaaattaaaagaaactGTACCCATCCTACAAAACCGTCCAAAA
GCTTCAAATGTCAGTGTGCTAACTGAATCAATGAAATATATACAGGAATT
AAATGAAATTGACAAACAGCATTCACTCGAAATCACTCGTTTAAGAAGAT
GTCGAATGTGTCTTGAAGAGCGaattaaaatgttaaaagaagaaattgat
aAACTACCACCTGAAAATAGGCCTAAAATTATATTCAAAGAAACTCCTAT
CGAACCTGAAAGGGAAAGTACAGATCATGCTAACCCTTCTCCTACTACTT
CGACTGGAGCGCCTCCTAAAAAGCCGAAAAAAGAAATGGTGTCTATAGAA
ATTCAAGCAAATGAGGAAGATATTCGTGATGCATTACCTGAATCGTATGC
cgatgaaaaaacttttgaccaGCCGTTACCGGATGTTTTACCGGCTCACG
AAACTTTAAAGTGTCAGCTTCACACTGAACCCTCTTCTGAAGAAAGGTTG
ACAAATTTGAAAGATAAATTGATGCGAAAGCGAGTTTTGGAGTCTATGTT
GGATGGCGATGAAGATTCTGAAAATGACGAAGATGTATTAAAAATTGTCT
GCgaagaattgaaaatttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009439XLOC_009439Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016859-exon-sc0000253-1491911889:291217..291722TCONS_00016859-exon-sc0000253-1491911889:291217..291722Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1510915933:291217..291722TCONS_00016859-exon-sc0000253-1510915933:291217..291722Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1575043694:291217..291722TCONS_00016859-exon-sc0000253-1575043694:291217..291722Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1491911889:291866..291938TCONS_00016859-exon-sc0000253-1491911889:291866..291938Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1510915933:291866..291938TCONS_00016859-exon-sc0000253-1510915933:291866..291938Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1575043694:291866..291938TCONS_00016859-exon-sc0000253-1575043694:291866..291938Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1491911889:292468..292509TCONS_00016859-exon-sc0000253-1491911889:292468..292509Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1510915933:292468..292509TCONS_00016859-exon-sc0000253-1510915933:292468..292509Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1575043694:292468..292509TCONS_00016859-exon-sc0000253-1575043694:292468..292509Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1491911889:294558..294672TCONS_00016859-exon-sc0000253-1491911889:294558..294672Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1510915933:294558..294672TCONS_00016859-exon-sc0000253-1510915933:294558..294672Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1575043694:294558..294672TCONS_00016859-exon-sc0000253-1575043694:294558..294672Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1491911889:295621..296698TCONS_00016859-exon-sc0000253-1491911889:295621..296698Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1510915933:295621..296698TCONS_00016859-exon-sc0000253-1510915933:295621..296698Clytia hemisphaericaexon
TCONS_00016859-exon-sc0000253-1575043694:295621..296698TCONS_00016859-exon-sc0000253-1575043694:295621..296698Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016859-proteinTCONS_00016859-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000253supercontigsc0000253:291217..296698 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.1707 19.3474 3.37147 2.69803 15.481 14.3748 4.78787 6.85872 4.10035 2.60293 3.24902 2.96117 5.5582 6.32319 5.89822 4.26296 5.30238 6.00978 4.01974 2.91849 5.43889 5.65419 43.2283 32.8467 2.9134 4.346 3.34032 2.05329 20.2192 24.5491
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR018065Ribosomal_L34e_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016859 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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