TCONS_00016889 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016889
Unique NameTCONS_00016889
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2173

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016889 ID=TCONS_00016889|Name=TCONS_00016889|organism=Clytia hemisphaerica|type=transcript|length=2173bp
TAGGTTGGAATCAATTTTTAATTACCCATCTATTGAATGAATTCGTTGAC
CcttgaatttttaaataatctcaaaaatgaaaaaaaacaagtacCTGCTA
TACAGTATAGAGCTGGTTTGATTCGTTGTCAAACAAATATCAATTTTGAG
AaggacaaaaaaaattatggaaTCCTTCAGTGGAATCTTGAAAGGCCGAc
agttttgaaaagaaaaaaaccaaTGCAATCAGGACCACCAGACCATTAGA
CCAACCTAAGGATGAAATACAAAGTACTACAACAACTGGAGCGTTTCCTG
GTGTCCATTCTTCTTTATTCACATTACCTACACGCCATTATATTNACGAC
TCTTGGTGTCCATTCTTCTTTATTCACATTACCTACACGCCATCATATTG
GGTCGTCGAATAATGAAACCAGATAAAAGCGTTAATACAGCATATTTCGA
GTTAGCACATACCGATAAAGTACACGGTAGGACTCCATTCCATGATCAAC
ATGTTTTGGATAAAATGGAATGTGTCCATCTTTGTACAGACTTCCCGAAT
TGTAGATCTTTCAATTGGAACGAGGATGACGAAAGATGTCAGCTGGTTGC
ATATGATCGACTGACTGCACCAACATACACCGACAAGACTGGATGGAATA
ATTATGATGGTGGAAATCAATACTACGTACATATCGAAACACACAGCGTC
TCACACATAGCTTGTTACAGAGGTACAGGTGGCTCGTGTAGTCGAGATCA
GGTAATACAAACCTATTCGTCCAATAATTGTGATATTGACCTTAATACCA
ACACCTTTGAATATGATCCAGTGTTAGGAGTAATACGACAAATGTGCGGC
ACAAAGTATTTACTGGCACCTGAACAAAATGTATGGGAGGATTCGAATTC
TGGAAATCCAAAGGTCATTCTACAAGGACCAGCAGCGTGGTCGAGTGACG
TCAGAATGCGTTGGAGAAGAGTGCACTATGGAATCTCGTATTGGCATTAC
TGTTTATATATGTGGGGCGATGGAGCAACAGGTTCTGACCAAGCCTTGGA
AATTGGAAATTGTTATCATAATCACCATGCTATTCAAATTCACTTCGTCC
ATGCTCCAAAGCCACCTGTTAAAGTGACTGTCTTCACAAATATCGGAGTT
CATTCCACTATGGATTCTGTACTTGCTCATACTAAAATCGTAAACAACAA
TTACGATCGAATCGGATATTCAGATGGTTTTGTACAACAAACATGGGGTG
AAACTTACTTTTTACGTATGGAAGCTCTTTTTGTTGCCCCTGACACAGGA
TCGTTCAAATTCAAGTTGAACGTGGATGACATTGGTCGGGTTTCAATCAG
TACTGATGAAAATGCAGCCAACAAAAACACCATTTTGGATGACGCAGGCA
CCAATCCAGATACTGCTCCTCGTGAAATTCATATCCACGGATGGGATTTT
GTTAACTATGGTAAAGAATCAACAGCTGTAAGTTTGACAAAAGGAATGAG
ATATTACATTGAAGTGTTAATGTATGAATGGGGAGGCGCTGATTTTATAC
AAATGGCCATGCTATGTCCTTCAAGTACGGAATATGAATTTGTGGAGACC
AATTATCTGAACCTCATCGAATCAGAATGGGAGACATAACGtggtttttt
gaaatctacTGTTGAAAATCCATGTTTTTATTAAAACTGCTTGGTAAAAG
CATCGACAAGAAACTTTACTTGAGCATTGTGCTTTAATTTTGATTGACTT
TTAAATGTCGAGAAAGTTTTTAATCCAACTTTCAGAATTCTGcatcaaaa
acaaagaatttcGTGTTGTGTATGTGCgttcaaaagaaaagtgaaactga
ttgaaaaatatgaaaaatagttGGCATTCcctatgaaaatgaaatattat
ttatACAAAAATGGGTACTGGGGTTAACTGTCGGTTTTTTACCTTTCCAA
ATCTTTTTAAGGGTGAAAACCAtagaaatgaaataaatttgaCGTTCTTA
CAGACAATCTTTAATTTTTATCATTGCACTTTTATATGCACTAATACTAT
TTTATAAATTGTACATACACATAATATGGCATAATAATTTAATGCATTGC
TTACCTTGacacaaattttgaatttttttttatatatgtaaCATGCCATC
CAAACAACACACATTTTAAGCAG
Run BLAST on NCBI

protein sequence of TCONS_00016889-protein

>TCONS_00016889-protein ID=TCONS_00016889-protein|Name=TCONS_00016889-protein|organism=Clytia hemisphaerica|type=polypeptide|length=408bp
MKPDKSVNTAYFELAHTDKVHGRTPFHDQHVLDKMECVHLCTDFPNCRSF
NWNEDDERCQLVAYDRLTAPTYTDKTGWNNYDGGNQYYVHIETHSVSHIA
CYRGTGGSCSRDQVIQTYSSNNCDIDLNTNTFEYDPVLGVIRQMCGTKYL
LAPEQNVWEDSNSGNPKVILQGPAAWSSDVRMRWRRVHYGISYWHYCLYM
WGDGATGSDQALEIGNCYHNHHAIQIHFVHAPKPPVKVTVFTNIGVHSTM
DSVLAHTKIVNNNYDRIGYSDGFVQQTWGETYFLRMEALFVAPDTGSFKF
KLNVDDIGRVSISTDENAANKNTILDDAGTNPDTAPREIHIHGWDFVNYG
KESTAVSLTKGMRYYIEVLMYEWGGADFIQMAMLCPSSTEYEFVETNYLN
LIESEWET
Run BLAST on NCBI

transcript from alignment at sc0000253:235972..243910-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016889 ID=TCONS_00016889|Name=TCONS_00016889|organism=Clytia hemisphaerica|type=transcript|length=7939bp|location=Sequence derived from alignment at sc0000253:235972..243910- (Clytia hemisphaerica)
TAGGTTGGAATCAATTTTTAATTACCCATCTATTGAATGAATTCGTTGAC
CCTTGAATTTTTAAATAATCTCAAAAATGAAAAAAAACAAGTACCTGCTA
TACAGTATAGAGCTGGTTTGATTCGTTGTCAAACAAATATCAATTTTGAG
AAGGACAAAAAAAATTATGGAATCCTTCAGTGGAATCTTGGTAAGAATAT
AACTTTTCTATGTAAAAAACCCAATTCTATATCTTTTAAGTGTTTTTGCC
AGCCAATTGATTGTTAGGGAGCATTTTGGGGTTGCCTCTAGTAGCGTTCA
CCCCTGTGTCGGAAAATTTGCGTAGGAGAGCACAATTTTGTTACGAAGTG
ATTATCTTTTAATACTACGAATAGATAATTACTTTGTCATAAAAATCTGC
CCTCCTACACAAATTTTCCGACATCCCTGAGAACGCTACTGCTACATAGG
CAAGAAAAGGGTATACGCTTTTTTTTACAAGATTATGGTGTAAATCCATT
TCATCATGGACATTCTCAACCTTCTTGGGAAAATCATCCTAAAATATTCT
TACAGCATTCTTAAGTTAGGATCCTAATCTAGCTTTTATACATTTCGTAC
ATACAGAAAGGCCGACAGTTTTGAAAAGAAAAAAACCAATGCAATCAGGA
CCACCAGACCATTAGACCAACCTAAGGATGAAATACAAAGTACTACAACA
ACTGGAGCGTTTCCTGGTGTCCATTCTTCTTTATTCACATTACCTACACG
CCATTATATTNACGACTCTTGGTGTCCATTCTTCTTTATTCACATTACCT
ACACGCCATCATATTGGGTCGTCGAATAATGAAACCAGATAAAAGCGTTA
ATACAGCATATTTCGAGTTAGCACATACCGATAAAGTACACGGTAGGACT
CCATTCCATGATCAACATGTTTTGGATAAAATGGAATGTGTCCATCTTTG
TACAGACTTCCCGAATTGTAGATCTTTCAATTGGAACGAGGATGACGAAA
GATGTCAGCTGGTTGCATATGATCGACTGACTGCACCAACATACACCGAC
AAGGTACTCTTTTTCTTCTAAAGAAGTGTACCAGCTTTATTATAGCCAGT
ACCTTCCCACAAACCAAATTTTTTCTTTGTGTTATGGTCAGTTACACTTT
GAAGCATTTTTCGAAAGTTATCGCACTACGATGGAGGGTGACGTCGATAC
CGTGCGGAGTGCATAAAGGCGGGAAAACACAGAACTCGAAAATAAAGACT
GGAATGGGCGATTGAATAGGATTTCATCATGGAGAGGTTGTGCGTCGATG
TCAAATCTAGTCTTAATTTTAGAGTTCCGTGCATAAAAATCAAAACAAAA
GAATCCTCGGGATGAGGATGAAGTTTTGGCCCGCTAAAAATGCTTGTTTC
TCAAAGTGAGAATATTTCGATACACCCATTTATAACGAAAGAACTATAGA
ATCAAAAAAGTCTCCAAGCAGCTCCAATTAATGTTATTGTCAACAGGCTC
TTAATTTAATAAAGGAAACTTCTTCAAAAGGTTTTGTAGAGAAACAAACT
AAATCAAAGAAAACTCTCAACACTAGCCATAGCCAGTCTTTGAATCAGGA
ATGTAAAATAATAAGGAATAAATTCCAAGACTAGTGTTTGATGGAATTAT
AAGTCGCGATAGAAAAAGCGGTTTTCGTCCAACAGGCTAGCTTTATTATG
CCAATTTGTAAATTTTGGATTTAAAAAAATGTTGCGTACCGGAAAGGTTA
AGCCTGTTAAAACTTCTTAAAGAAAATTTAAATTTCTTCTTTTATCCAGA
CTGGATGGAATAATTATGATGGTGGAAATCAATACTACGTACATATCGAA
ACACACAGCGTCTCACACATAGCTTGTTACAGAGGTACAGGTGGCTCGTG
TAGTCGAGATCAGGTAATACAAACCTATTCGTCCAATAATTGTGATATTG
ACCTTAATACCAACACCTTTGAATATGATCCAGTGTTAGGAGTAATACGA
CAAATGTGCGGCACAAAGTATTTACTGGCACCTGAACAAAATGTATGGGA
GGATTCGAATTCTGGTAAGTTAATATAAAGCCACTTGGTTCAAACGTTCA
TCTAACGTTTGTTTAACATCCAAGAAAAATTTTATAATAACAAAAGGCCA
AAATTGGTCAAATCCTAAGAACAGATTTAAGAACAATGTGAAACTAAATT
TCAAGAAGACAATACTGATTATAACATATTTTGAGAGATTTTAAACCCAT
TTTATATTTAAAGTTAGTAAGAACATCGTAAGAACATCACGGCTGGAAAT
TCCAAAAAACTTACAATATTTACTGGTTCTCATAAAAAAGCATATAATTA
TCATTTTGAGACATTTGATTTACACGGATATTCTATATAGCTTTTAGAGC
CAATCGACTCTCCTGAAAATCTTTTAGAAATTGCTAAATCTCGATTTAAA
TGATGCCAATCTTCCACATTCATTTTAAAGGAAATCCAAAGGTCATTCTA
CAAGGACCAGCAGCGTGGTCGAGTGACGTCAGAATGCGTTGGAGAAGAGT
GCACTGTAAGTACAAAACACGGAGCACGGCTATTGATATATACATTAGAT
TAAATTAGTTAAAAGCGAATAATAAGAGGCAAACAAATCTGAAAAGTATC
ACAAATCCACATTGAAAGGATGATGGCATAAACTTTCGGTCATGCCGGGC
ACAAATTTTAGGGTTGACAATAAGAATGCAAAAGTGTGAAAAGATCCTCA
AAATCGACGAATCTAAGGAGTACTTTAAATTCAAATTTAGCGTAGCCTGT
TTCAATTTTCTTAAAAACGTTTAGAAATCTAATAATTGTATTCACCTGAG
TCTGCTAAAGGCAGAGGTCGCAGCTTACGCGTCTCCGCGCCCTCATTTTG
TTTCCACACCTCCGCGCCCTACGCACCTCCTCACCTTACGTGTCCTACAC
GCCCCCACGCCTTAATATTTTTATGCGCCTTGATTTTTTCACCCTTCTTT
AAATTTTCCATGCGCTTTCATATATTTTCACGCGCCTTCGTTTTTAGTAC
AACTTCATTCATTTTTGCTTTACTTTATGAAAAAGCAAGTTCTATGAGAA
TTGGTAAAAGGAAACAAAAGGGATGACGCACAATACGAATATATTTATTT
TTCTTATAAACATCTACTTTATAAGAATCAAATTGCCAATTAAAAAAAAA
TTGATAAGTCGATTTTCAACATTTTCCGATTGTAACTTTTTTATTAAATT
GAGCATAATTTTTGATTTAATAAATAACTCATCAAAATTTTGGTTTATAA
TTCTTTTCAATAAAACAGGAATGGTTCTTTTAAAATTTTAGGATTTCGAG
AAAATTGATTTTAAACAGAGAAAATCTTTTGTGGTGCACCCAGTAATTCC
TTGTCTCTTTTACTCCAAATCTATAACGGTAACGGACATACATTAGGCTT
CTGGCATCCACAAGCGTGTTCGTGCTCCATATAGAGCAGAATACTATAAT
TATGATCAGAATATGTTGGCATTTCTGGGTATTTCAGCATTTTACTGAAT
TTAAATTTCTTGTGATAATGACATTCACTTAAAAACTACCTACGTTTTTA
CATTTTACAGGGAAAAGTATCTACTAGATGATAATCTATTATTTTCTATT
GCATGTTACAAAAAATTCAACTTTCAAGAAATTTAGTTTGAAATTCTGGT
CTTTATTTCAAGAATTTCACAGGGTCCACACCAACAGGACAGGAAGGACA
GAGGAGGGGCATTGTCCCGTCACTATAGTTTCAATTTTAAATCTGACCTT
TTATTATAGGCTTTTGAGAACTTACATTTTCAGGAAAGTCAGTTCAAAAC
AGGAGTGGTTTTAGCTAGATGAGAGGGTTGGTTTAACGAAACTTTTTCGA
CATGTCGAGGGCGGGAGCGGTGCGAATTTTTGTTTCGATTTTTGGAAATA
TCTTCCAGCCCCTTCTAGTAGATACTTTATGACCACTCCCTAACATATCA
AGAATTTTGAAATACTGACAAAAAGCTTCTCTTTTATTAACTTATATAAA
GATGGAATCTCGTATTGGCATTACTGTTTATATATGTGGGGCGATGGAGC
AACAGGTTCTGACCAAGCCTTGGAAATTGGAAATTGTTATCATAATCACC
ATGCTATTCAAATTCACTTCGTCCATGCTCGTAAGTTTAAAAAATACACG
TTTTTTTTTATAAGAACATCCAAAATTTTCAAAGTGTTGGATGTTCTCAA
CTTCTGGATTTTAAAGCCTAAAAATATTCATAACGCGTTATTCTGTTTGT
ATTTTTTTTAGTATTTTTGTTCATTTTCCTATGAAATCGGATGTCTTAGA
GGGGCCCTTAGAGTCCACAAATCCAAATGTTCTTAACTTGCTCTTATTTT
GGCCAACGAAGCCTTATGTTCTTATATGAATAGTTTTTTCTTTTAAAAAG
GTGTAAAACAGTTTGGCTGCAAAAATTTGGCAAGTAGTCAAAAGGGGCGA
AATTAATTTCGAAATGAAATCTCCCAAAGGGTCGATTTTCGAACACCGAG
TCATATTGCAAACCTAGTACCTTCTACGGGAGTTCTTTACTTCAGAATGA
CATTTTCTTTGTTAACTTTTTTGGCCACTTCGTACCAAAGGCAGAGGAAG
AAAGTCAAATGAAAGTTAATGAGCTTGTGACTCAATCTATTTCGTTGTCA
ATTTTAGAGGGATAGAGATTGTGAAAAAATTTTCAACTGAATAGATTTAA
CTATTTTACATAGTGTTACAATTTAATTTCACGAAGATTTTTCTTCCAGT
AAAGCAAATTGTTGCAAATCCCCCTTAAGGTTGCTTTCAATCTCATTCCT
CGTATGTACTATCTTTATCTACAGCTTTGTTGTGGTTCAGACTATTTAAC
CTTAATTGGCTAAACCTAAACCCTTAATCATATGTCATTTCCTGGTGTCT
CCATATTTTAGGCGGTCTTCCTCTGTTTCTCTTCCTTGTTTAGTCGTTCT
TTAGGGTTTAATGCACTAAACTTTATACCCTGGATGCAGTTTCTCGATCC
CGGCCAAGTAAAATCACGACCGGATCGGAATATTTTTTGAAAAAATGTAC
TCAATGGTAACACAACTCAATAGCAGTGCATGTGAATGCATAGAGAGTAG
AAGATCTACTTTTACTTGAATATATTTGATGATGTAGCGCCGTTTGATGC
TAATGTCAACAATGCAATTGCTTCTCTGAAGGTACCACTTTAAAAAAAAA
CTCCGATCAAGGGTGGCCGATCTAGCTTTGTCTAGGGTTTATAATGGTCA
GTGGTTTAATGAGGATCACAAATAAGATGCAATCTATATTATTTACCGTT
TTAGCAAAGCCACCTGTTAAAGTGACTGTCTTCACAAATATCGGAGTTCA
TTCCACTATGGATTCTGTACTTGCTCATACTAAAATCGTAAACAACAATT
ACGATCGAATCGGATATTCAGATGGTTTTGTACAACAAACATGGGGTGAA
ACTTACTTTTTACGTATGGAAGCTCTTTTTGTTGCCCCTGACACAGGATC
GTTCAAATTCAAGGTACATATTATTGAGGGTTTGGACCACGTGCAAACGC
TAGGGTTTTGTTTCGTTTTCTGAAACAAAAAGCAGCCATTCTATTGGTTG
AATTCAAATTTTACGTCTCATTTGACCAATAAAATGGCTTTATTTAGTTT
TGGAGCAATAACGGAACCATTATCTGCGAGAATATGGTCTCTAAAACTTC
TATTCCAAACCTTCAAGGGTAATAAATTCATGTTTGTTCACTTCATTTTT
CATCTTGACAAGTTCTACTCATTTCGTGACTTTAGATAAAATATTTAAAA
AAATGAGTCCAACGTAAGGTCCTTTAAACCTGTTTAAACTCTTGTACCAC
AACTATGTAGGCAATTAAAATCTCCCCCTGGTAGAAAATCTTGATAACTT
TGGCCAAAATTGAGGAAGCAAATGTAAAAAATTTGGATTTATGTGATTGC
TGTGAAACAATATAGCATTTTTGGCTAAAGAATCGCTTTTTTGCTCTTAT
AAAAGAAAAAAGGTGCTAGAATTGATGGCCTTGGGAAGATTTAGGCGTTC
TTTGTTTTTCGGCGCCCATAAAAAATGAGCGGGTGACTGCCACGCAACTG
CCAATCACGGTTCAAAATAAATTGAGATTTTTAGGATTTTCTAACGTTTT
TCTATTACTTAAAGATTATTCACTTATGGTTAATTTTAAAATGGTGCAGA
GAATACACTTTTTCCCAAATAATATGACTATGATGTGTCCCTGAAAAAAG
CTTTTCTATGACAAGTTCTTTCTGAAAGATTCATATGCTCTTTTTCTTTA
CAAACCAGTTGAACGTGGATGACATTGGTCGGGTTTCAATCAGTACTGAT
GAAAATGCAGCCAACAAAAACACCATTTTGGATGACGCAGGCACCAATCC
AGATACTGCTCCTCGTGAAATTCATATCCACGGATGGGATTTTGTTAACT
AGTAAGTAGCCAAGATCGAATATCAACTTAATGTCAAACAAATTACCATA
TGTAACAAACGTATAGGTTTGGGTGAGTGTTGAAACGATACCGGGAGCAC
CCCCAGCTGGCACTCAACGTTGTTTAAACGTTCAAATAACGTTATTTGGA
CGTTATGGAATGTCACATGGACGTTATTTTGACGTTGTGTGCAGACTGGG
CCACAATTTAGCTTTCTCTAAAATTAAACTTGTTGCCACGAAGAACAAGA
ATTTTATCGCGCATGTCTCAATCCCATTACTTTTGTTTGTATACGCTGTA
AGGGCAAATCCCGATTTTTTTCACTGAATGAGGACCGTACCAATCAGAGC
CCGTAAGAAGTGTAGAAAATAATCAATGAAAAAGAGAGCTATCTAGCAAA
AGGCGTGATATAACCTCCGCTCAACAAGTTTTCACACACTCATTGCAGTC
CCAACAAGTTTTCTCACACTCATTGCAGTCATTTAATCTCACCCAATCGG
ATTCCAGTATAATCTCTCGCAATCAAAACAACAATTTTTCGTTTCTGATT
GTTTTGATAAAATAGAACGTTCTTAATAAAGAGAATACAAAAAGTCTTCG
GCAAAGGCAAACATGTTTTTACTGAGTTTCTTTGCAACTAAGATAATAGT
ATACATCTTTTTAATTTATACTATTAGCATAGAACCTTGGCTAAATATAA
TCTTACATATTCTTTTTTCTGCAGTGGTAAAGAATCAACAGCTGTAAGTT
TGACAAAAGGAATGAGATATTACATTGAAGTGTTAATGTATGAATGGGGA
GGCGCTGATTTTATACAAATGGCCATGCTATGTCCTTCAAGTACGGAATA
TGAATTTGTGGAGACCAATTATCTGAACCTCATCGAATCAGAATGGGAGA
CATAACGTGGTTTTTTGAAATCTACTGTTGAAAATCCATGTTTTTATTAA
AACTGCTTGGTAAAAGCATCGACAAGAAACTTTACTTGAGCATTGTGCTT
TAATTTTGATTGACTTTTAAATGTCGAGAAAGTTTTTAATCCAACTTTCA
GAATTCTGCATCAAAAACAAAGAATTTCGTGTTGTGTATGTGCGTTCAAA
AGAAAAGTGAAACTGATTGAAAAATATGAAAAATAGTTGGCATTCCCTAT
GAAAATGAAATATTATTTATACAAAAATGGGTACTGGGGTTAACTGTCGG
TTTTTTACCTTTCCAAATCTTTTTAAGGGTGAAAACCATAGAAATGAAAT
AAATTTGACGTTCTTACAGACAATCTTTAATTTTTATCATTGCACTTTTA
TATGCACTAATACTATTTTATAAATTGTACATACACATAATATGGCATAA
TAATTTAATGCATTGCTTACCTTGACACAAATTTTGAATTTTTTTTTATA
TATGTAACATGCCATCCAAACAACACACATTTTAAGCAG

Coding sequence (CDS) from alignment at sc0000253:235972..243910-

>TCONS_00016889 ID=TCONS_00016889|Name=TCONS_00016889|organism=Clytia hemisphaerica|type=CDS|length=8589bp|location=Sequence derived from alignment at sc0000253:235972..243910- (Clytia hemisphaerica)
TGGTAAAGAATCAACAGCTGTAAGTTTGACAAAAGGAATGAGATATTACA
TTGAAGTGTTAATGTATGAATGGGGAGGCGCTGATTTTATACAAATGGCC
ATGCTATGTCCTTCAAGTACGGAATATGAATTTGTGGAGACCAATTATCT
GAACCTCATCGAATCAGAATGGGAGACATAATTGAACGTGGATGACATTG
GTCGGGTTTCAATCAGTACTGATGAAAATGCAGCCAACAAAAACACCATT
TTGGATGACGCAGGCACCAATCCAGATACTGCTCCTCGTGAAATTCATAT
CCACGGATGGGATTTTGTTAACTACAAAGCCACCTGTTAAAGTGACTGTC
TTCACAAATATCGGAGTTCATTCCACTATGGATTCTGTACTTGCTCATAC
TAAAATCGTAAACAACAATTACGATCGAATCGGATATTCAGATGGTTTTG
TACAACAAACATGGGGTGAAACTTACTTTTTACGTATGGAAGCTCTTTTT
GTTGCCCCTGACACAGGATCGTTCAAATTCAAGATGGAATCTCGTATTGG
CATTACTGTTTATATATGTGGGGCGATGGAGCAACAGGTTCTGACCAAGC
CTTGGAAATTGGAAATTGTTATCATAATCACCATGCTATTCAAATTCACT
TCGTCCATGCTCGAAATCCAAAGGTCATTCTACAAGGACCAGCAGCGTGG
TCGAGTGACGTCAGAATGCGTTGGAGAAGAGTGCACTACTGGATGGAATA
ATTATGATGGTGGAAATCAATACTACGTACATATCGAAACACACAGCGTC
TCACACATAGCTTGTTACAGAGGTACAGGTGGCTCGTGTAGTCGAGATCA
GGTAATACAAACCTATTCGTCCAATAATTGTGATATTGACCTTAATACCA
ACACCTTTGAATATGATCCAGTGTTAGGAGTAATACGACAAATGTGCGGC
ACAAAGTATTTACTGGCACCTGAACAAAATGTATGGGAGGATTCGAATTC
TGATGAAACCAGATAAAAGCGTTAATACAGCATATTTCGAGTTAGCACAT
ACCGATAAAGTACACGGTAGGACTCCATTCCATGATCAACATGTTTTGGA
TAAAATGGAATGTGTCCATCTTTGTACAGACTTCCCGAATTGTAGATCTT
TCAATTGGAACGAGGATGACGAAAGATGTCAGCTGGTTGCATATGATCGA
CTGACTGCACCAACATACACCGACAAGTGGTAAAGAATCAACAGCTGTAA
GTTTGACAAAAGGAATGAGATATTACATTGAAGTGTTAATGTATGAATGG
GGAGGCGCTGATTTTATACAAATGGCCATGCTATGTCCTTCAAGTACGGA
ATATGAATTTGTGGAGACCAATTATCTGAACCTCATCGAATCAGAATGGG
AGACATAATTGAACGTGGATGACATTGGTCGGGTTTCAATCAGTACTGAT
GAAAATGCAGCCAACAAAAACACCATTTTGGATGACGCAGGCACCAATCC
AGATACTGCTCCTCGTGAAATTCATATCCACGGATGGGATTTTGTTAACT
ACAAAGCCACCTGTTAAAGTGACTGTCTTCACAAATATCGGAGTTCATTC
CACTATGGATTCTGTACTTGCTCATACTAAAATCGTAAACAACAATTACG
ATCGAATCGGATATTCAGATGGTTTTGTACAACAAACATGGGGTGAAACT
TACTTTTTACGTATGGAAGCTCTTTTTGTTGCCCCTGACACAGGATCGTT
CAAATTCAAGATGGAATCTCGTATTGGCATTACTGTTTATATATGTGGGG
CGATGGAGCAACAGGTTCTGACCAAGCCTTGGAAATTGGAAATTGTTATC
ATAATCACCATGCTATTCAAATTCACTTCGTCCATGCTCGAAATCCAAAG
GTCATTCTACAAGGACCAGCAGCGTGGTCGAGTGACGTCAGAATGCGTTG
GAGAAGAGTGCACTACTGGATGGAATAATTATGATGGTGGAAATCAATAC
TACGTACATATCGAAACACACAGCGTCTCACACATAGCTTGTTACAGAGG
TACAGGTGGCTCGTGTAGTCGAGATCAGGTAATACAAACCTATTCGTCCA
ATAATTGTGATATTGACCTTAATACCAACACCTTTGAATATGATCCAGTG
TTAGGAGTAATACGACAAATGTGCGGCACAAAGTATTTACTGGCACCTGA
ACAAAATGTATGGGAGGATTCGAATTCTGATGAAACCAGATAAAAGCGTT
AATACAGCATATTTCGAGTTAGCACATACCGATAAAGTACACGGTAGGAC
TCCATTCCATGATCAACATGTTTTGGATAAAATGGAATGTGTCCATCTTT
GTACAGACTTCCCGAATTGTAGATCTTTCAATTGGAACGAGGATGACGAA
AGATGTCAGCTGGTTGCATATGATCGACTGACTGCACCAACATACACCGA
CAAGTGGTAAAGAATCAACAGCTGTAAGTTTGACAAAAGGAATGAGATAT
TACATTGAAGTGTTAATGTATGAATGGGGAGGCGCTGATTTTATACAAAT
GGCCATGCTATGTCCTTCAAGTACGGAATATGAATTTGTGGAGACCAATT
ATCTGAACCTCATCGAATCAGAATGGGAGACATAATTGAACGTGGATGAC
ATTGGTCGGGTTTCAATCAGTACTGATGAAAATGCAGCCAACAAAAACAC
CATTTTGGATGACGCAGGCACCAATCCAGATACTGCTCCTCGTGAAATTC
ATATCCACGGATGGGATTTTGTTAACTACAAAGCCACCTGTTAAAGTGAC
TGTCTTCACAAATATCGGAGTTCATTCCACTATGGATTCTGTACTTGCTC
ATACTAAAATCGTAAACAACAATTACGATCGAATCGGATATTCAGATGGT
TTTGTACAACAAACATGGGGTGAAACTTACTTTTTACGTATGGAAGCTCT
TTTTGTTGCCCCTGACACAGGATCGTTCAAATTCAAGATGGAATCTCGTA
TTGGCATTACTGTTTATATATGTGGGGCGATGGAGCAACAGGTTCTGACC
AAGCCTTGGAAATTGGAAATTGTTATCATAATCACCATGCTATTCAAATT
CACTTCGTCCATGCTCGAAATCCAAAGGTCATTCTACAAGGACCAGCAGC
GTGGTCGAGTGACGTCAGAATGCGTTGGAGAAGAGTGCACTACTGGATGG
AATAATTATGATGGTGGAAATCAATACTACGTACATATCGAAACACACAG
CGTCTCACACATAGCTTGTTACAGAGGTACAGGTGGCTCGTGTAGTCGAG
ATCAGGTAATACAAACCTATTCGTCCAATAATTGTGATATTGACCTTAAT
ACCAACACCTTTGAATATGATCCAGTGTTAGGAGTAATACGACAAATGTG
CGGCACAAAGTATTTACTGGCACCTGAACAAAATGTATGGGAGGATTCGA
ATTCTGATGAAACCAGATAAAAGCGTTAATACAGCATATTTCGAGTTAGC
ACATACCGATAAAGTACACGGTAGGACTCCATTCCATGATCAACATGTTT
TGGATAAAATGGAATGTGTCCATCTTTGTACAGACTTCCCGAATTGTAGA
TCTTTCAATTGGAACGAGGATGACGAAAGATGTCAGCTGGTTGCATATGA
TCGACTGACTGCACCAACATACACCGACAAGTGGTAAAGAATCAACAGCT
GTAAGTTTGACAAAAGGAATGAGATATTACATTGAAGTGTTAATGTATGA
ATGGGGAGGCGCTGATTTTATACAAATGGCCATGCTATGTCCTTCAAGTA
CGGAATATGAATTTGTGGAGACCAATTATCTGAACCTCATCGAATCAGAA
TGGGAGACATAATTGAACGTGGATGACATTGGTCGGGTTTCAATCAGTAC
TGATGAAAATGCAGCCAACAAAAACACCATTTTGGATGACGCAGGCACCA
ATCCAGATACTGCTCCTCGTGAAATTCATATCCACGGATGGGATTTTGTT
AACTACAAAGCCACCTGTTAAAGTGACTGTCTTCACAAATATCGGAGTTC
ATTCCACTATGGATTCTGTACTTGCTCATACTAAAATCGTAAACAACAAT
TACGATCGAATCGGATATTCAGATGGTTTTGTACAACAAACATGGGGTGA
AACTTACTTTTTACGTATGGAAGCTCTTTTTGTTGCCCCTGACACAGGAT
CGTTCAAATTCAAGATGGAATCTCGTATTGGCATTACTGTTTATATATGT
GGGGCGATGGAGCAACAGGTTCTGACCAAGCCTTGGAAATTGGAAATTGT
TATCATAATCACCATGCTATTCAAATTCACTTCGTCCATGCTCGAAATCC
AAAGGTCATTCTACAAGGACCAGCAGCGTGGTCGAGTGACGTCAGAATGC
GTTGGAGAAGAGTGCACTACTGGATGGAATAATTATGATGGTGGAAATCA
ATACTACGTACATATCGAAACACACAGCGTCTCACACATAGCTTGTTACA
GAGGTACAGGTGGCTCGTGTAGTCGAGATCAGGTAATACAAACCTATTCG
TCCAATAATTGTGATATTGACCTTAATACCAACACCTTTGAATATGATCC
AGTGTTAGGAGTAATACGACAAATGTGCGGCACAAAGTATTTACTGGCAC
CTGAACAAAATGTATGGGAGGATTCGAATTCTGATGAAACCAGATAAAAG
CGTTAATACAGCATATTTCGAGTTAGCACATACCGATAAAGTACACGGTA
GGACTCCATTCCATGATCAACATGTTTTGGATAAAATGGAATGTGTCCAT
CTTTGTACAGACTTCCCGAATTGTAGATCTTTCAATTGGAACGAGGATGA
CGAAAGATGTCAGCTGGTTGCATATGATCGACTGACTGCACCAACATACA
CCGACAAGTGGTAAAGAATCAACAGCTGTAAGTTTGACAAAAGGAATGAG
ATATTACATTGAAGTGTTAATGTATGAATGGGGAGGCGCTGATTTTATAC
AAATGGCCATGCTATGTCCTTCAAGTACGGAATATGAATTTGTGGAGACC
AATTATCTGAACCTCATCGAATCAGAATGGGAGACATAATTGAACGTGGA
TGACATTGGTCGGGTTTCAATCAGTACTGATGAAAATGCAGCCAACAAAA
ACACCATTTTGGATGACGCAGGCACCAATCCAGATACTGCTCCTCGTGAA
ATTCATATCCACGGATGGGATTTTGTTAACTACAAAGCCACCTGTTAAAG
TGACTGTCTTCACAAATATCGGAGTTCATTCCACTATGGATTCTGTACTT
GCTCATACTAAAATCGTAAACAACAATTACGATCGAATCGGATATTCAGA
TGGTTTTGTACAACAAACATGGGGTGAAACTTACTTTTTACGTATGGAAG
CTCTTTTTGTTGCCCCTGACACAGGATCGTTCAAATTCAAGATGGAATCT
CGTATTGGCATTACTGTTTATATATGTGGGGCGATGGAGCAACAGGTTCT
GACCAAGCCTTGGAAATTGGAAATTGTTATCATAATCACCATGCTATTCA
AATTCACTTCGTCCATGCTCGAAATCCAAAGGTCATTCTACAAGGACCAG
CAGCGTGGTCGAGTGACGTCAGAATGCGTTGGAGAAGAGTGCACTACTGG
ATGGAATAATTATGATGGTGGAAATCAATACTACGTACATATCGAAACAC
ACAGCGTCTCACACATAGCTTGTTACAGAGGTACAGGTGGCTCGTGTAGT
CGAGATCAGGTAATACAAACCTATTCGTCCAATAATTGTGATATTGACCT
TAATACCAACACCTTTGAATATGATCCAGTGTTAGGAGTAATACGACAAA
TGTGCGGCACAAAGTATTTACTGGCACCTGAACAAAATGTATGGGAGGAT
TCGAATTCTGATGAAACCAGATAAAAGCGTTAATACAGCATATTTCGAGT
TAGCACATACCGATAAAGTACACGGTAGGACTCCATTCCATGATCAACAT
GTTTTGGATAAAATGGAATGTGTCCATCTTTGTACAGACTTCCCGAATTG
TAGATCTTTCAATTGGAACGAGGATGACGAAAGATGTCAGCTGGTTGCAT
ATGATCGACTGACTGCACCAACATACACCGACAAGTGGTAAAGAATCAAC
AGCTGTAAGTTTGACAAAAGGAATGAGATATTACATTGAAGTGTTAATGT
ATGAATGGGGAGGCGCTGATTTTATACAAATGGCCATGCTATGTCCTTCA
AGTACGGAATATGAATTTGTGGAGACCAATTATCTGAACCTCATCGAATC
AGAATGGGAGACATAATTGAACGTGGATGACATTGGTCGGGTTTCAATCA
GTACTGATGAAAATGCAGCCAACAAAAACACCATTTTGGATGACGCAGGC
ACCAATCCAGATACTGCTCCTCGTGAAATTCATATCCACGGATGGGATTT
TGTTAACTACAAAGCCACCTGTTAAAGTGACTGTCTTCACAAATATCGGA
GTTCATTCCACTATGGATTCTGTACTTGCTCATACTAAAATCGTAAACAA
CAATTACGATCGAATCGGATATTCAGATGGTTTTGTACAACAAACATGGG
GTGAAACTTACTTTTTACGTATGGAAGCTCTTTTTGTTGCCCCTGACACA
GGATCGTTCAAATTCAAGATGGAATCTCGTATTGGCATTACTGTTTATAT
ATGTGGGGCGATGGAGCAACAGGTTCTGACCAAGCCTTGGAAATTGGAAA
TTGTTATCATAATCACCATGCTATTCAAATTCACTTCGTCCATGCTCGAA
ATCCAAAGGTCATTCTACAAGGACCAGCAGCGTGGTCGAGTGACGTCAGA
ATGCGTTGGAGAAGAGTGCACTACTGGATGGAATAATTATGATGGTGGAA
ATCAATACTACGTACATATCGAAACACACAGCGTCTCACACATAGCTTGT
TACAGAGGTACAGGTGGCTCGTGTAGTCGAGATCAGGTAATACAAACCTA
TTCGTCCAATAATTGTGATATTGACCTTAATACCAACACCTTTGAATATG
ATCCAGTGTTAGGAGTAATACGACAAATGTGCGGCACAAAGTATTTACTG
GCACCTGAACAAAATGTATGGGAGGATTCGAATTCTGATGAAACCAGATA
AAAGCGTTAATACAGCATATTTCGAGTTAGCACATACCGATAAAGTACAC
GGTAGGACTCCATTCCATGATCAACATGTTTTGGATAAAATGGAATGTGT
CCATCTTTGTACAGACTTCCCGAATTGTAGATCTTTCAATTGGAACGAGG
ATGACGAAAGATGTCAGCTGGTTGCATATGATCGACTGACTGCACCAACA
TACACCGACAAGTGGTAAAGAATCAACAGCTGTAAGTTTGACAAAAGGAA
TGAGATATTACATTGAAGTGTTAATGTATGAATGGGGAGGCGCTGATTTT
ATACAAATGGCCATGCTATGTCCTTCAAGTACGGAATATGAATTTGTGGA
GACCAATTATCTGAACCTCATCGAATCAGAATGGGAGACATAATTGAACG
TGGATGACATTGGTCGGGTTTCAATCAGTACTGATGAAAATGCAGCCAAC
AAAAACACCATTTTGGATGACGCAGGCACCAATCCAGATACTGCTCCTCG
TGAAATTCATATCCACGGATGGGATTTTGTTAACTACAAAGCCACCTGTT
AAAGTGACTGTCTTCACAAATATCGGAGTTCATTCCACTATGGATTCTGT
ACTTGCTCATACTAAAATCGTAAACAACAATTACGATCGAATCGGATATT
CAGATGGTTTTGTACAACAAACATGGGGTGAAACTTACTTTTTACGTATG
GAAGCTCTTTTTGTTGCCCCTGACACAGGATCGTTCAAATTCAAGATGGA
ATCTCGTATTGGCATTACTGTTTATATATGTGGGGCGATGGAGCAACAGG
TTCTGACCAAGCCTTGGAAATTGGAAATTGTTATCATAATCACCATGCTA
TTCAAATTCACTTCGTCCATGCTCGAAATCCAAAGGTCATTCTACAAGGA
CCAGCAGCGTGGTCGAGTGACGTCAGAATGCGTTGGAGAAGAGTGCACTA
CTGGATGGAATAATTATGATGGTGGAAATCAATACTACGTACATATCGAA
ACACACAGCGTCTCACACATAGCTTGTTACAGAGGTACAGGTGGCTCGTG
TAGTCGAGATCAGGTAATACAAACCTATTCGTCCAATAATTGTGATATTG
ACCTTAATACCAACACCTTTGAATATGATCCAGTGTTAGGAGTAATACGA
CAAATGTGCGGCACAAAGTATTTACTGGCACCTGAACAAAATGTATGGGA
GGATTCGAATTCTGATGAAACCAGATAAAAGCGTTAATACAGCATATTTC
GAGTTAGCACATACCGATAAAGTACACGGTAGGACTCCATTCCATGATCA
ACATGTTTTGGATAAAATGGAATGTGTCCATCTTTGTACAGACTTCCCGA
ATTGTAGATCTTTCAATTGGAACGAGGATGACGAAAGATGTCAGCTGGTT
GCATATGATCGACTGACTGCACCAACATACACCGACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009452XLOC_009452Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016889-proteinTCONS_00016889-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016889-exon-sc0000253-1575043694:243721..243910TCONS_00016889-exon-sc0000253-1575043694:243721..243910Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1575043694:242858..243304TCONS_00016889-exon-sc0000253-1575043694:242858..243304Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1575043694:241847..242111TCONS_00016889-exon-sc0000253-1575043694:241847..242111Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1575043694:241356..241430TCONS_00016889-exon-sc0000253-1575043694:241356..241430Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1575043694:239731..239859TCONS_00016889-exon-sc0000253-1575043694:239731..239859Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1575043694:238348..238556TCONS_00016889-exon-sc0000253-1575043694:238348..238556Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1575043694:237410..237552TCONS_00016889-exon-sc0000253-1575043694:237410..237552Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1575043694:235972..236686TCONS_00016889-exon-sc0000253-1575043694:235972..236686Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1510915933:243721..243910TCONS_00016889-exon-sc0000253-1510915933:243721..243910Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1510915933:242858..243304TCONS_00016889-exon-sc0000253-1510915933:242858..243304Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1510915933:241847..242111TCONS_00016889-exon-sc0000253-1510915933:241847..242111Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1510915933:241356..241430TCONS_00016889-exon-sc0000253-1510915933:241356..241430Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1510915933:239731..239859TCONS_00016889-exon-sc0000253-1510915933:239731..239859Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1510915933:238348..238556TCONS_00016889-exon-sc0000253-1510915933:238348..238556Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1510915933:237410..237552TCONS_00016889-exon-sc0000253-1510915933:237410..237552Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1510915933:235972..236686TCONS_00016889-exon-sc0000253-1510915933:235972..236686Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1491911889:243721..243910TCONS_00016889-exon-sc0000253-1491911889:243721..243910Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1491911889:242858..243304TCONS_00016889-exon-sc0000253-1491911889:242858..243304Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1491911889:241847..242111TCONS_00016889-exon-sc0000253-1491911889:241847..242111Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1491911889:241356..241430TCONS_00016889-exon-sc0000253-1491911889:241356..241430Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1491911889:239731..239859TCONS_00016889-exon-sc0000253-1491911889:239731..239859Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1491911889:238348..238556TCONS_00016889-exon-sc0000253-1491911889:238348..238556Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1491911889:237410..237552TCONS_00016889-exon-sc0000253-1491911889:237410..237552Clytia hemisphaericaexon
TCONS_00016889-exon-sc0000253-1491911889:235972..236686TCONS_00016889-exon-sc0000253-1491911889:235972..236686Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000253supercontigsc0000253:235972..243910 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.108384	0.105692	0.040906	0.0600302	0	0	0	0	2.877	1.05589	1.70202	1.66021	15.0173	14.8719	6.04158	4.62324	0.705151	0.972942	21.3147	25.3385	1.34483	1.09895	2.31973	4.18028	3.33586	6.81981	1.13939	0.317214	0.0200497	0.0204274
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
IPR011658PA14_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016889 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top