|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016921 ID=TCONS_00016921|Name=TCONS_00016921|organism=Clytia hemisphaerica|type=transcript|length=2470bp
AAAACTTTTGATTGCCATGCCAGAGCACAAAAACACAAGCTGTAACGACG
ATTTTTCTATGTGCACATTTTTTTCTAACTCTCTGTTGTTTCTCTTGTGA
TGTTGATATAGAAAACgcttttaagaagatttttttggaaagaataatTA
TGGTTTCAGTTTGATGTGGCTTTAAAGATTTCTCGATGGTTACACCTTTA
GACACCATATTGGTTTTAACTGAATGGAAGTAAGACGACGTTCCCCTAGC
AACAGTGTAAACATGGAATCGTTACCTTCGTCACAAGAATCTACTCCCGA
AATGCCACGCAAAGCGGATGATAAACATGAACGCGCGCCTGAAAACGAAG
ACGAACGCAAACAACTTTCAGATGATTTAAGAAACTTGGACGAACAATCG
GCCCGCGCGGCCCGCATGTTGGTTTATAAAAGGAATAAATATGTGTTTTT
GTTACAATCAATGCTCCTTGGGATTTCATACTCCATCATTTGGCCCACTT
TATTACCGTATATTCTTGAAGATTCAGCTCAGaTTTACAAGTCAGATCAA
TCGCAAGTTGTCAGTCGTATTTTGTATGGAATTACATACGTTGCATATCC
TCTAGGTTCAATGGTGTCTGCAAAACTTGTAGAGAAACTAAACTTTAATA
CGAAAAAAATGGTGCTGTTTTTAAACATGTTTGAGATTTGTGGAAATCTA
TTGTTTACGCTGTCAATGATACCTTGTGCACCGGCTGTAGGTCGATTCTT
GGCTGGTCTTGGTGACGCCTTCTACGTCGTCCTCATGAAAGAGATGCATC
AATACACTGAACTATCAAACGAACGTCTAACAATCGAATGTTTAGCTGCT
TTTGTGCTTGGTGTCATTCTTTCCCCTGGCATCAATATTGTGACCACGTT
CATGCATTTCTCTTTAGGTTCATTAACCTTTGATGCCAGTAATTTCCCAG
GATTAACAGCAGCTGTTTTATTCCTGATCATGCAGTTTATTATCGCTATC
TTCATTAAGGATCATAGTGATGAAGAAGAAACCAATCGCGAGAAATCCTC
ATCGGGCGCCACGCCAAATAAATTCATTGATAGTGAATATATTAAAGATC
TTGAATACACTGCTTGGTTTGTTAATGGTTTTTCGTTTGTTTATACCTAT
ATTGTAGCCTTATTCGAGCTCATTATTCCATTCTTAATGTATGAACGTCT
AAAAGCATCAACAATCGGAGTCATGCTTTTATATGCAATCATCGGCACTG
TGTATGCAATGTTTTTGTTAATGACTATGACCGTGAGTTTTGATTACCAG
CCTGAGATCTTTATCGGAATATCGATCATTGTCGAGATCGCAGGCTTATC
ATCAGTATTATATTTCACTTGGTTAACACAATACACAATCGTCGCTGATA
TCATCGGCATCGGGATCATCGTAGTCGCGTTGACTTTGTTATGGAGTGTT
GACGACGTTCTCTTCATCAATTTCGTCCAAATGTTTGTTCCGTATCATCA
ACGTGAGAAAACACATAATGTTCGCAAATTTATGTCAAAATTGGCTTTCG
CTTTTGCTGGTATTACAATCCCTGTGCTTTACCCGacaattttattttac
tttctaCCTGTTTTGATTGTGATTGTTTGTGTCCTGTTTGTGAACTTCGT
GGTCATCAAAGTTGTTTTAACGAAGAGATCGAAGTAGTGGGGTTTATAAT
TATGGTAGATCTTGTATTGAAAAAAACACACATTGTCAAGACTTTGTCAA
TCGCAagatatcaaaaatcaaatcaatcgagTCAAATAGAACACAATAGA
TGAACTTAAATTCGATCGATCGCCGATTTTACTAGTAGAGCAACTAACCA
AACATAATTACCGTAGAGTTTAGTTTTAACCAATCAGCGCCTGAGAAAGA
CCAAAAAAAGTGATACAGAATTTTCTATCATTTGTACAGGATGTccggaa
aaaagtatcgagtcgtaccacttctatagaaagaaagttctgtgtgtgtt
tcactaaatttgcaatgtttattaaagtttctctctgtgtcatGTTAATT
GTCATCTtctatgaataacttttacaaaaaacaattctcaataactttaa
cgtcatgcAACACAcacaacaaccttctactcagaatcatgttcgagctc
gatactttttttccggacaccctgtattttgGCTAACGACCTTACAATTT
TCAACCTTGAATGGGATTTTAAAGTGTTggagaaagaaatattttgagaa
gGTCCAAAGATTCGTGTTCTCAATGGTGTTTTCATATTTGATTTAGACTT
AGGTTAGgttatatttttaaaatgttatcATTTTGACTGGATTGTTGCTA
ATATTGATCTTTTGTTATTGCAGGTAATTAGGGGAAAAATCTGTTAATTG
TTATTTTCTTGCTTATTTTATATCTTCCCGTCTGCGCACTTTTTTGTAAg
gcaaaaaatggcattttttc Run BLAST on NCBI protein sequence of TCONS_00016921-protein >TCONS_00016921-protein ID=TCONS_00016921-protein|Name=TCONS_00016921-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
MEVRRRSPSNSVNMESLPSSQESTPEMPRKADDKHERAPENEDERKQLSD
DLRNLDEQSARAARMLVYKRNKYVFLLQSMLLGISYSIIWPTLLPYILED
SAQIYKSDQSQVVSRILYGITYVAYPLGSMVSAKLVEKLNFNTKKMVLFL
NMFEICGNLLFTLSMIPCAPAVGRFLAGLGDAFYVVLMKEMHQYTELSNE
RLTIECLAAFVLGVILSPGINIVTTFMHFSLGSLTFDASNFPGLTAAVLF
LIMQFIIAIFIKDHSDEEETNREKSSSGATPNKFIDSEYIKDLEYTAWFV
NGFSFVYTYIVALFELIIPFLMYERLKASTIGVMLLYAIIGTVYAMFLLM
TMTVSFDYQPEIFIGISIIVEIAGLSSVLYFTWLTQYTIVADIIGIGIIV
VALTLLWSVDDVLFINFVQMFVPYHQREKTHNVRKFMSKLAFAFAGITIP
VLYPTILFYFLPVLIVIVCVLFVNFVVIKVVLTKRSK Run BLAST on NCBI transcript from alignment at sc0000254:291567..301868+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016921 ID=TCONS_00016921|Name=TCONS_00016921|organism=Clytia hemisphaerica|type=transcript|length=10302bp|location=Sequence derived from alignment at sc0000254:291567..301868+ (Clytia hemisphaerica)
AAAACTTTTGATTGCCATGCCAGAGCACAAAAACACAAGCTGTAACGACG
ATTTTTCTATGTGCACATTTTTTTCTAACTCTCTGTTGTTTCTCTTGTGA
TGTTGATATAGAAAACgcttttaagaagatttttttggaaagaataatTA
TGGTTTCAGTTTGATGTGGCTTTAAAGATTTCTCGATGGTAagtttttag
ctttttcgcGTAAGTTACAGGCTGCTGAAAGTCTATCTTTGATTTAGCCT
GGATGCCCaagttcaaaattttagaaaaaaaaatttacctcaacatacaa
agttctaaaatcatagagcttggtctccctagagaatgaaagtgcaaacc
agaacataaaatatcaaaaactagactgtgaaatagtttacagcctgaaT
ATCCAGGCTATCTTTGATTTTACAGGGGACAAAAAggatagaaaaacaaa
acattaattaaATTTGGTGTCTCAGATTCTAGCTAcgagtctgttcctct
aaagaatcctgcattgtaacacgtatgcgtgaagtcaggtaacttgcatt
agtggagggaaacttgcatagccatcaaatgactgaccaatcaaagcagc
tccgctcgcagctctctactctaccatttttgttttgatttaactttata
ttttaatgaccagccaggtcattcatttgagggctatgcgtgttagcctc
cactgatgcaagttacccgatctcacggtatgcGTGATCTGTCGTTCTTT
TaaccatatgtagttaattcccgtgataaaaaaagacgaatGAATACGta
aggagggggggggggtacagtcacttgttgttttttatgaaatttgtcat
tcttttgtctatttttagtaatgcagtaTTCTTTAAACAAACCCCCTCTA
CATAGTAATAAAACTTCGACTTTAGAAAGATGTATACTATTAGCTCAGAG
AagtgtaaagagatggaaaaacagcttctttaaaacaatggaaatacggT
TCGTCATGTACCAGGTCCTTTTCCCCTAAGGGAGTTAGTTTTAGTTGATG
GATTTCTTTTGctgttgataaaaaaaatctgtATGATTAGCGTGACGtga
cgaaattcttttgtttttagtcTAATTATGCGTAAACTTATATTTTGGGA
ATATCTCACGCAGacctagacgatgttatcgtccattacattgatagtaa
aggcgggaaaaatggcggtatggcgttatggcggtgaacgggaaaaaaat
cggcggtagagtttcgaagaaacggctgtaaactcttttcagcaaaaaac
ccgatttttcgttttctcaagacaacgaaaatattttgttatcaaaagca
aaaataataacatctaCCTTATTCCCAAGAGGGTCCCAAGAgcaattaaa
aatgacaaactttttctctttgtttggaACGCAATATTCTATCAAAACAA
TGAGAAACGataaattgttgttttgattgcGAGAGAAAATACAAGTATCA
GATTGGACGCGATAAAACGAGCCGCAACGAGAGTTGTactaacgcacttt
gtaataacgccacactttgtaatacctgaagcactttgtaataaaaacTG
ACGCACTTTGTAATGAATGACCTAAcgcactttttaataaaaattaacgc
actttgtaataccaaaagctgacgcactttgtaataacaCCCTACGCATT
TTGTAATACAAAAAAgctgacgcactttgtaataacatctgacacacttt
gtaataattTAGAGAATTTAAACGTTTTTTACCACCTGataacacaggaa
aaaattttcgatttccaaggttggaaatctcaaattttcttagttggaaa
aaagataaaatccaatggaaaatccaacctgaaaatgtgggacattgtcc
aaggttggaaatgttgcattttccatggcttggaatNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaa
aaaagccaaaatccaagcttaaacaaggttggaatttttaaaaattcagt
tggaaaaaagccaaaatccaagcttaaacaaggttggaattttttaaaat
tcagttggaaaacaaggttggaattttcgaaaatctaggttgaaaaaagc
caaaatccaaatttaacNTAGCTacacatcaaaacagttttgagcgaaaa
atcgcttgtggttttctcaaaggagcatgcgcagaaaatggttagaaaaa
cgtaatttccacatggattttttaacgttttccaaactgtttggagaaac
acaaatttccaacccaaaaagtctagttttccaatcgaaagggttgcaat
ttcacaaaaatgtaatttccacatggatttttaacgttttccaaactgtt
tggagaaacacaaatttccaacccaaaaagtctagttttccaagaaaggN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtataaaaccaaaa
tttccaacccaaaaatatcgaatttccaaccttggaaatcgaacattttt
tcctgtgtaatgTCATCCATTTTGCCACCGCTTAAAAAAAAGGACTCCTC
TAACTTTTTACCACTTTAATTTCAtctatttcattttattttttctcgtT
TGTATTAAACTTTTGAGCAAGCATAATCGTCTGTATTTGACATTCGAAGA
ATACAAAGaattttatctataagaattgcTCAAGGACCAAGCTAAAAGTT
AATatgatgaaataaaattttaaacaaatttagCTTACAACCTACAATGG
TGGCCAAAATATGATTATACCTTTTATGACATTACAGTATTTCCAAAAAG
GATACTTTTCGCATATTCTGTCTGCAGGGAAGATAAAAAGGCTGTAGACT
TGGATAGTATTCGAATAGCGCTTCGTCGTGCAAACGTCatgattattact
tctctcatttgaccgaaattcaatcccacaatccttttcgtcttatttca
aaagtcgtgaaagttattactttttctttgtaattgagtgtaatttgcgt
gcaagTGTAATAAACGCAAAGtgtgatgggattgaatttcggtcaaacag
aaaaatcaatgtctatttttagattcgcgacGGTATGCTATTGAATACaa
taaaacctctaattaacagacactctaaaaggcggataCCTCTGATTAGC
CGACAATTCTATTTTCCCCGGCCATTTCCTATTTAaatcaaatcctcata
aaagaTTGGCGGACCCTCAATTAACGGACCCTCCGATTAGCGTTTAATTT
CAATTCGAATTGAATGGCGGTTTTGTGCTCTCCTCCTGCAATAACTAATG
TTAGCTATTTGAGGGGCAGAGACTACTATATGTTAGAGAAGTACCtaaag
ttttttctcatttttgcttTCACCAAATAGGTTACACCTTTAGACACCAT
ATTGGTTTTAACTGAATGGAAGTAAGACGACGTTCCCCTAGCAACAGTGT
AAACATGGAATCGTTACCTTCGTCACAAGAATCTACTCCCGAAATGCCAC
GCAAAGCGGATGATAAACATGAACGCGCGCCTGAAAACGAAGACGAACGC
AAACAACTTTCAGATGATTTAAGAAACTTGGACGAACAATCGGCCCGCGC
GGCCCGCATGTTGGTTTATAAAAGGAATAAATATGTGTTTTTGTTACAAT
CAATGCTCCTTGGGATTTCATACTCCATCATTTGGCCCACTTTATTACCG
TATATTCTTGAAGATTCAGCTCAGGTCAGTGTATTATGATATATAACAAC
CTTGTTCActgtgtattatcagctttctgatgcttactgatagcgctaga
taataccctggcattgtctgTTTTTCGAATGCGTAAGATGACgtaattca
aaacaaaacgtcagatttcatttgtttctggatttgaaaccattgcatta
CAGTGCAACTTTATAACGTCAGATTTTTTCATGGCGTATTGTTTCGAGAA
GTTCCTTCTCTGAGAGGGGGGACTcgcgcatcagccaacaccagggtttt
ctctggcgtccataagtaacgtaaataTATATTGGTTGAATATACAGTAG
TAACCGTTAACAATCCaacccagttggcacacaacgttgtttcaacgtcc
atctaacgttatatggacgttatgaacattagataaacgttgaaacaacg
ttgtgtgccagctgggaaaagCTCAAATGCAAAAAGTAGTGATAGTAACG
CTGTACAGTCactatgaaaaaaaacaaaaacaaactggTGCATAGTTCAC
AAAAGACATTTGCAGTGTTTTTTTAGACGGTCGGCTTGATTCGTCTCTCA
CATTATTCACAAATATTTGCATTTGATTATTGAGCAAATTTTTTATCGTT
AATGGCAACTACAGTAGGTATTTatttagcctgtaccaaactcttcttcg
ctgaGTGAAAAGATAACGCGAAGTTTGGTTTGTTACGGTTACGTAACATT
CCATGTCTCagacattagcgagtttatgtatttgcacttttgaggacggt
gaAGCGGTTTGGAAAAACCCACAactctgacccgcaaaatcgaggacggt
gaAAGtgttgatttaccgtcgtcctcggctggttaggatctagtcaaatt
agaaccttaccgtcttcgtcactgaaaaacacacatacataaactcggga
TTTTTTCGTAAGTGGTGGAGGATAgctatttttagcattcaatTTAGCTC
AACTAAAGTGACCTTACTTTTAACGCATCAATGCAATGGTATCTTTCATT
TCTAAAAAGAGCACTCCTACGCTTTTGTTTTCTCGGATTTTATCCCAGAA
AACTGACACAGAATCTCGCTTGCCAAAACAGACtggcaagttttttcaaa
atatatgaaAACGTCCCTTGGGCGGGGTGGTACACAGTAGTTATTTGTTT
CAACATCAATTTCTTTCAGAGGTAGGAAGCTTTTAAAGCGGGTTGTCCAC
TTTGTATAAAGAATGTAAGAATGTTCTTGAGGGATATCGacatgacgtca
cttttaacttttgtAAAGTTCTAGCAGGATATCATGAGCCCCGCTGGGAG
GGGGCATGGCCCTCACCTTTTTTGCAgactatttttttcaaaagtcaaaa
acatttttcatgtttttttttatgttgcTCTGCCGTTGTGGGTGACAATC
TTTTCCCAAAAGTTTTGATCCTCATTTCAAACAGCTCTCCAGGGGCCCAT
GACATTCACAGCAGATAGAAGAACTGACATCAGTTTAATGTACCTTTTCG
Actgtagactagtaaaccacgtcgttgtatttcgctgcagattaaacttt
caaatgggattaattttttttatatgttcacagtccttttttcgcaccta
tagacaatagaaaaatgtgtcaaaaaaggcctgggacagttttagtggga
taagcggacaaaaaaatgcccgcgcagcaattagcggctacggtcgaaaa
ggtgtatgcAAGACATTTAAGGATGATGGTAAtgagactgggttcgagtt
tgctAGGAAGAATGACGTTGAAATATATGCAGTCGTTTCTTAGACAttct
aaaaaaacaatgaatttcATCCTCATTTTTTTTGTATACTTTGTGTTAGC
CAAAACCAATAACAATGCTCAATGTTAATGATAACAGAGCTTTATACTAG
TTTGAGTACtctcatttttttgtaaattcaatACCAGACCCCTCAAGCCG
ACCGTGCCATCAAAATTAATAGCGTatataaaagttttattttctaaaag
tttcatttactttcgtttttagaTTTACAAGTCAGATCAATCGCAAGTTG
TCAGTCGTATTTTGTATGGAATCACGTACGTTGCCTATCCTCTAGGTTCN
ggacaaaaaaatgcccgtgcAGCAATTAGCAGCTagggtcgaaaaggtgt
atgcAAGGCATTTAAGGATGATGGTAATGAGACTGGATTCGAGTTTGCCA
GGAAGAATGACGTTGAAATATCTGAAGTCGTTTCTTagacatttttttgt
aaattcaatACCTCAAGCCGACCGTGCCAATAAAAACTGATAGTGTAtac
aaaagtttcattttttaaaagtttcatttactttcgtttttagaTTTACA
AGTCAGATCAATCGCAAGTTGTCAGTCGTATTTTGTATGGAATTACATAC
GTTGCATATCCTCTAGGTTCAATGGTGTCTGCAAAACTTGTAGAGAAACT
AAACTTTAATACGAAAAAAATGGTGCTGTTTTTAAACATGTTTGAGATTT
GTGGAAATCTATTGTTTACGCTGTCAATGATACCTTGTGCACCGGCTGTA
GGTAAGTTCATtgagttaaaggttttatttctacataagtgtttccgctt
catatcagacacatatttcatatcaggaaagtgtcttgctattgttatat
tatgctgatataaacaaaaaaagttattatttccctctttctgaccaatc
ttgctccacatccgtgtcaaagccaacgtgaaaaagcttgtgaattaaaa
ttgacgagtaagcaaacgatatcacttttacttaaaaacaaaacctttaa
agtccTGAAAGGGCTAGAGATGAAACTCTTATTTCTCGGTTTTTCTTCCC
CTCTTATTTCCCATGgcacacaaacgccggattgaaggCTCAAAACTATT
TTAGGatataaaaaaatgtgcaaAGTGAAATTTAAGAAATCGCTCGATTC
AATCCATCATTCTGAATGTGAGACACTCAAATTTAAAAGCTTTACCACTC
TAGCCCCTTGGGCTTAAAACTGAATGGGTAAATGGGTAATTAGTTTTAGA
GCTTACACACGATTCTGTTTCAATCACATTTGCCACATCCTTTTAACGCA
GAGTGTACTTTAGgcatacaaactttcgcgagattgaaaaattgcaaaat
tcacgacatttaccttcgctaattcgaacacaaaaaatcttttttgcgag
cataaacttccGAGAGTCAagacataaaaattaaaattttcacacgAAAA
ATAGCTAAGAGCAAATTCTAAAAGCTTTACcactctagccctttgggctt
ataACTGAATGGGTAATAGGGTAAACAGTTTCAGAGCTTACACACAATCC
TGTTTCAATCACATTCGCCACATCCTTTTAACGCGGagtgtactttaggc
gtacaaactttcgcgagcagaaatttTCACAAGGTCgataaatcgcgaaa
ttcacgacatttatcttcgctaattcgaacaaaaaatctttttcgcaagc
ataaacttcCGCGAGTCAagacataaaaatgaaaattttactcacGAAGA
ATAGCTAAGAGGGACaaaatacttcttgaattggAGTGAAACTTTTGTCT
TTTGACTTATGTTGCCTTGCCAAGTTAAAAAAGtgtcataaattttacat
tttattgtaATTTAGAAATGTTACAGATTTTGTGAAGAATTTTTCGCGTg
cataaacttttgcaaatgatcctttcaagaattttcaaagacatttactt
tcgcgaaaagggctaaaatttgcgaaaatcgcaagaaagtttgtacgcct
aaagtagtgtGAAAAGAATGAATGATCTGATAAGAGATTAACCTTAAACC
TCATTGTTTGTCATACCTTTAGGTCGATTCTTGGCTGGTCTTGGTGACGC
CTTCTACGTCGTCCTCATGAAAGAGATGCATCAATACACTGAACTATCAA
ACGAACGTCTAACAATCGAATGTTTAGCTGCTTTTGTGCTTGGTGTCATT
CTTTCCCCTGGCATCAATATTGTGACCACGTTCATGCATTTCTCTTTAGG
TTCATTAACCTTTGATGCCAGTAATTTCCCAGGATTAACAGCAGCTGTTT
TATTCCTGATCATGCAGTTTATTATCGCTATCTTCATTAAGGATCATAGT
GATGAAGAAGAAACCAATCGCGAGAAATCCTCATCGGGCGCCACGCCAAA
TAAATTCATTGATAGTGAATATATTAAAGATCTTGAATACACTGCTTGGT
TTGTTAATGGTTTTTCGTTTGTTTATACCTATATTGTAGCCTTATTCGAG
CTCATTATTCCATTCTTAATGTATGAACGTCTAAAAGCATCAACAATCGG
AGTCATGCTTTTATATGCAATCATCGGCACTGTGTATGCAATGTTTTTGT
TAATGACTATGACCGTGAGTTTTGATTACCAGCCTGAGATCTTTATCGGA
ATATCGATCATTGTCGAGATCGCAGGCTTATCATCAGTATTATATTTCAC
TTGGTTAACACAATACACAATCGTCGCTGATATCATCGGCATCGGGATCA
TCGTAGTCGCGTTGACTTTGTTATGGAGTGTTGACGACGTTCTCTTCATC
AATTTCGTCCAAATGTTTGTTCCGTATCATCAACGTGAGAAAACACATAA
TGTTCGCAAATTTATGTCAAAATTGGCTTTCGCTTTTGCTGGTATTACAA
TCCCTGTGCTTTACCCGacaattttattttactttctaCCTGTTTTGATT
GTGATTGTTTGTGTCCTGTTTGTGAACTTCGTGGTCATCAAAGTTGTTTT
AACGAAGAGATCGAAGTAGTGGGGTTTATAATTATGGTAGATCTTGTATT
GAAAAAAACACACATTGTCAAGACTTTGTCAATCGCAagatatcaaaaat
caaatcaatcgagTCAAATAGAACACAATAGATGAACTTAAATTCGATCG
ATCGCCGATTTTACTAGTAGAGCAACTAACCAAACATAATTACCGTAGAG
TTTAGTTTTAACCAATCAGCGCCTGAGAAAGACCAAAAAAAGTGATACAG
AATTTTCTATCATTTGTACAGGATGTccggaaaaaagtatcgagtcgtac
cacttctatagaaagaaagttctgtgtgtgtttcactaaatttgcaatgt
ttattaaagtttctctctgtgtcatGTTAATTGTCATCTtctatgaataa
cttttacaaaaaacaattctcaataactttaacgtcatgcAACACAcaca
acaaccttctactcagaatcatgttcgagctcgatactttttttccggac
accctgtattttgGCTAACGACCTTACAATTTTCAACCTTGAATGGGATT
TTAAAGTGTTggagaaagaaatattttgagaagGTCCAAAGATTCGTGTT
CTCAATGGTGTTTTCATATTTGATTTAGACTTAGGTTAGgttatattttt
aaaatgttatcATTTTGACTGGATTGTTGCTAATATTGATCTTTTGTTAT
TGCAGGTAATTAGGGGAAAAATCTGTTAATTGTTATTTTCTTGCTTATTT
TATATCTTCCCGTCTGCGCACTTTTTTGTAAggcaaaaaatggcattttt
tc Coding sequence (CDS) from alignment at sc0000254:291567..301868+ >TCONS_00016921 ID=TCONS_00016921|Name=TCONS_00016921|organism=Clytia hemisphaerica|type=CDS|length=4392bp|location=Sequence derived from alignment at sc0000254:291567..301868+ (Clytia hemisphaerica)
ATGGAAGTAAGACGACGTTCCCCTAGCAACAGTGTAAACATGGAATCGTT
ACCTTCGTCACAAGAATCTACTCCCGAAATGCCACGCAAAGCGGATGATA
AACATGAACGCGCGCCTGAAAACGAAGACGAACGCAAACAACTTTCAGAT
GATTTAAGAAACTTGGACGAACAATCGGCCCGCGCGGCCCGCATGTTGGT
TTATAAAAGGAATAAATATGTGTTTTTGTTACAATCAATGCTCCTTGGGA
TTTCATACTCCATCATTTGGCCCACTTTATTACCGTATATTCTTGAAGAT
TCAGCTCAGaTTTACAAGTCAGATCAATCGCAAGTTGTCAGTCGTATTTT
GTATGGAATTACATACGTTGCATATCCTCTAGGTTCAATGGTGTCTGCAA
AACTTGTAGAGAAACTAAACTTTAATACGAAAAAAATGGTGCTGTTTTTA
AACATGTTTGAGATTTGTGGAAATCTATTGTTTACGCTGTCAATGATACC
TTGTGCACCGGCTGTAGGTCGATTCTTGGCTGGTCTTGGTGACGCCTTCT
ACGTCGTCCTCATGAAAGAGATGCATCAATACACTGAACTATCAAACGAA
CGTCTAACAATCGAATGTTTAGCTGCTTTTGTGCTTGGTGTCATTCTTTC
CCCTGGCATCAATATTGTGACCACGTTCATGCATTTCTCTTTAGGTTCAT
TAACCTTTGATGCCAGTAATTTCCCAGGATTAACAGCAGCTGTTTTATTC
CTGATCATGCAGTTTATTATCGCTATCTTCATTAAGGATCATAGTGATGA
AGAAGAAACCAATCGCGAGAAATCCTCATCGGGCGCCACGCCAAATAAAT
TCATTGATAGTGAATATATTAAAGATCTTGAATACACTGCTTGGTTTGTT
AATGGTTTTTCGTTTGTTTATACCTATATTGTAGCCTTATTCGAGCTCAT
TATTCCATTCTTAATGTATGAACGTCTAAAAGCATCAACAATCGGAGTCA
TGCTTTTATATGCAATCATCGGCACTGTGTATGCAATGTTTTTGTTAATG
ACTATGACCGTGAGTTTTGATTACCAGCCTGAGATCTTTATCGGAATATC
GATCATTGTCGAGATCGCAGGCTTATCATCAGTATTATATTTCACTTGGT
TAACACAATACACAATCGTCGCTGATATCATCGGCATCGGGATCATCGTA
GTCGCGTTGACTTTGTTATGGAGTGTTGACGACGTTCTCTTCATCAATTT
CGTCCAAATGTTTGTTCCGTATCATCAACGTGAGAAAACACATAATGTTC
GCAAATTTATGTCAAAATTGGCTTTCGCTTTTGCTGGTATTACAATCCCT
GTGCTTTACCCGacaattttattttactttctaCCTGTTTTGATTGTGAT
TGTTTGTGTCCTGTTTGTGAACTTCGTGGTCATCAAAGTTGTTTTAACGA
AGAGATCGAAGTAGATGGAAGTAAGACGACGTTCCCCTAGCAACAGTGTA
AACATGGAATCGTTACCTTCGTCACAAGAATCTACTCCCGAAATGCCACG
CAAAGCGGATGATAAACATGAACGCGCGCCTGAAAACGAAGACGAACGCA
AACAACTTTCAGATGATTTAAGAAACTTGGACGAACAATCGGCCCGCGCG
GCCCGCATGTTGGTTTATAAAAGGAATAAATATGTGTTTTTGTTACAATC
AATGCTCCTTGGGATTTCATACTCCATCATTTGGCCCACTTTATTACCGT
ATATTCTTGAAGATTCAGCTCAGaTTTACAAGTCAGATCAATCGCAAGTT
GTCAGTCGTATTTTGTATGGAATTACATACGTTGCATATCCTCTAGGTTC
AATGGTGTCTGCAAAACTTGTAGAGAAACTAAACTTTAATACGAAAAAAA
TGGTGCTGTTTTTAAACATGTTTGAGATTTGTGGAAATCTATTGTTTACG
CTGTCAATGATACCTTGTGCACCGGCTGTAGGTCGATTCTTGGCTGGTCT
TGGTGACGCCTTCTACGTCGTCCTCATGAAAGAGATGCATCAATACACTG
AACTATCAAACGAACGTCTAACAATCGAATGTTTAGCTGCTTTTGTGCTT
GGTGTCATTCTTTCCCCTGGCATCAATATTGTGACCACGTTCATGCATTT
CTCTTTAGGTTCATTAACCTTTGATGCCAGTAATTTCCCAGGATTAACAG
CAGCTGTTTTATTCCTGATCATGCAGTTTATTATCGCTATCTTCATTAAG
GATCATAGTGATGAAGAAGAAACCAATCGCGAGAAATCCTCATCGGGCGC
CACGCCAAATAAATTCATTGATAGTGAATATATTAAAGATCTTGAATACA
CTGCTTGGTTTGTTAATGGTTTTTCGTTTGTTTATACCTATATTGTAGCC
TTATTCGAGCTCATTATTCCATTCTTAATGTATGAACGTCTAAAAGCATC
AACAATCGGAGTCATGCTTTTATATGCAATCATCGGCACTGTGTATGCAA
TGTTTTTGTTAATGACTATGACCGTGAGTTTTGATTACCAGCCTGAGATC
TTTATCGGAATATCGATCATTGTCGAGATCGCAGGCTTATCATCAGTATT
ATATTTCACTTGGTTAACACAATACACAATCGTCGCTGATATCATCGGCA
TCGGGATCATCGTAGTCGCGTTGACTTTGTTATGGAGTGTTGACGACGTT
CTCTTCATCAATTTCGTCCAAATGTTTGTTCCGTATCATCAACGTGAGAA
AACACATAATGTTCGCAAATTTATGTCAAAATTGGCTTTCGCTTTTGCTG
GTATTACAATCCCTGTGCTTTACCCGacaattttattttactttctaCCT
GTTTTGATTGTGATTGTTTGTGTCCTGTTTGTGAACTTCGTGGTCATCAA
AGTTGTTTTAACGAAGAGATCGAAGTAGATGGAAGTAAGACGACGTTCCC
CTAGCAACAGTGTAAACATGGAATCGTTACCTTCGTCACAAGAATCTACT
CCCGAAATGCCACGCAAAGCGGATGATAAACATGAACGCGCGCCTGAAAA
CGAAGACGAACGCAAACAACTTTCAGATGATTTAAGAAACTTGGACGAAC
AATCGGCCCGCGCGGCCCGCATGTTGGTTTATAAAAGGAATAAATATGTG
TTTTTGTTACAATCAATGCTCCTTGGGATTTCATACTCCATCATTTGGCC
CACTTTATTACCGTATATTCTTGAAGATTCAGCTCAGaTTTACAAGTCAG
ATCAATCGCAAGTTGTCAGTCGTATTTTGTATGGAATTACATACGTTGCA
TATCCTCTAGGTTCAATGGTGTCTGCAAAACTTGTAGAGAAACTAAACTT
TAATACGAAAAAAATGGTGCTGTTTTTAAACATGTTTGAGATTTGTGGAA
ATCTATTGTTTACGCTGTCAATGATACCTTGTGCACCGGCTGTAGGTCGA
TTCTTGGCTGGTCTTGGTGACGCCTTCTACGTCGTCCTCATGAAAGAGAT
GCATCAATACACTGAACTATCAAACGAACGTCTAACAATCGAATGTTTAG
CTGCTTTTGTGCTTGGTGTCATTCTTTCCCCTGGCATCAATATTGTGACC
ACGTTCATGCATTTCTCTTTAGGTTCATTAACCTTTGATGCCAGTAATTT
CCCAGGATTAACAGCAGCTGTTTTATTCCTGATCATGCAGTTTATTATCG
CTATCTTCATTAAGGATCATAGTGATGAAGAAGAAACCAATCGCGAGAAA
TCCTCATCGGGCGCCACGCCAAATAAATTCATTGATAGTGAATATATTAA
AGATCTTGAATACACTGCTTGGTTTGTTAATGGTTTTTCGTTTGTTTATA
CCTATATTGTAGCCTTATTCGAGCTCATTATTCCATTCTTAATGTATGAA
CGTCTAAAAGCATCAACAATCGGAGTCATGCTTTTATATGCAATCATCGG
CACTGTGTATGCAATGTTTTTGTTAATGACTATGACCGTGAGTTTTGATT
ACCAGCCTGAGATCTTTATCGGAATATCGATCATTGTCGAGATCGCAGGC
TTATCATCAGTATTATATTTCACTTGGTTAACACAATACACAATCGTCGC
TGATATCATCGGCATCGGGATCATCGTAGTCGCGTTGACTTTGTTATGGA
GTGTTGACGACGTTCTCTTCATCAATTTCGTCCAAATGTTTGTTCCGTAT
CATCAACGTGAGAAAACACATAATGTTCGCAAATTTATGTCAAAATTGGC
TTTCGCTTTTGCTGGTATTACAATCCCTGTGCTTTACCCGacaattttat
tttactttctaCCTGTTTTGATTGTGATTGTTTGTGTCCTGTTTGTGAAC
TTCGTGGTCATCAAAGTTGTTTTAACGAAGAGATCGAAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016921-exon-sc0000254-1491911889:291567..291754 | TCONS_00016921-exon-sc0000254-1491911889:291567..291754 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1510915933:291567..291754 | TCONS_00016921-exon-sc0000254-1510915933:291567..291754 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1575043694:291567..291754 | TCONS_00016921-exon-sc0000254-1575043694:291567..291754 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1491911889:295897..296240 | TCONS_00016921-exon-sc0000254-1491911889:295897..296240 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1510915933:295897..296240 | TCONS_00016921-exon-sc0000254-1510915933:295897..296240 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1575043694:295897..296240 | TCONS_00016921-exon-sc0000254-1575043694:295897..296240 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1491911889:298610..298817 | TCONS_00016921-exon-sc0000254-1491911889:298610..298817 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1510915933:298610..298817 | TCONS_00016921-exon-sc0000254-1510915933:298610..298817 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1575043694:298610..298817 | TCONS_00016921-exon-sc0000254-1575043694:298610..298817 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1491911889:300139..301868 | TCONS_00016921-exon-sc0000254-1491911889:300139..301868 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1510915933:300139..301868 | TCONS_00016921-exon-sc0000254-1510915933:300139..301868 | Clytia hemisphaerica | exon |
| TCONS_00016921-exon-sc0000254-1575043694:300139..301868 | TCONS_00016921-exon-sc0000254-1575043694:300139..301868 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000254 | supercontig | sc0000254:291567..301868 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR020846 | MFS_dom |
Blast
The following BLAST results are available for this feature:
|
