TCONS_00016942 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016942
Unique NameTCONS_00016942
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2424

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016942 ID=TCONS_00016942|Name=TCONS_00016942|organism=Clytia hemisphaerica|type=transcript|length=2424bp
cataacgattaatttatacgttgtaactaccttttgtaataagcctgtgt
gacgGAGAAcgtatattttagcgataacacacagaaacttttctactcaa
tcgcatgttcaaactcgatactttaattagggacaccctgtagaaccAGC
GCTAAAATGTATTTGCCGATCATAATTCAAATGGTCACTTTCTGGATGTC
AGTTGGTGGCAACAATGAAGAAATACTTCCACAAGGTGAATTGTATAACC
AGCAACGTAATATCAAGCATTACAAAAGATTTGATGAAACAGTCGGTAGC
AACAATGAAGAAATACTTCCACAAGGTGAATTGTATAACCAGCAACGTAA
TATCAAGCATTACAAAATATTTGATGAAACAGTCGGTAGCAACAATGAAG
AAATACTTCCACAAGGTGAATTGTATAACCAGCAACGTAATATCAAGCAT
TACAAAAGATTTGATGGAACAGTCGGCAACAACAATGGCGGAATACATCG
ACAAGATGGCGGCCAGCAAAGTAGTATAAAGCGTTACAAAAGGTTTGATG
AAAAAACTGGTATGGATTCATACAAAGAAGCAAAAGAAGCTCATCAACAG
AAAACGTTGAAATCTAGCCTGGATAAATTAAAGAATCAAGCATTAGACCC
GTTTCCTATTACATGGAATTATACAGATAAATATTCTAACCGAACATTTG
GTGTTACTCGAAACAGTATTGCGTTAAAGTCACAACCCACTGAATGTGTA
TACGCTGTCAATAAAGTGAGACGTTTACACGGACTTCCAGAATTATCTTG
GGCCACAGATATCGCATATACGGCACAAGAATGGGCGCTCGCATTAGCCC
AGATTGATAAAGGTTGTGAAGCTACTCACGATGATTATCCAAATTTATGG
TTCAATGGAAAAGAAATAAGATTGggtgaaaacatttttctttcagatga
taaattttttgatgattgtGCACAATCAATTGCTGCCTGGTACAATGAAC
AATTCAAAGGTACCCATTACAACTACGATAAACCAGTGTACAACGTGGAT
CCGAACGGCCACGGTCATTTTATAACACTGATGTGGCCGACAACGAAATA
TTTTGGTGTGGGAATATCTTATGATTACGATATCGAATGTACCTACACTG
TAGCTCGTTTTGATGGTGTTCCAAACgaaaatgatttttacaaaaGCAGG
TACAGAATCCCGAAACCTAAAGAAAaggtGACTGTGACAGAGGCTTATTT
GACACCGAAGAAGCAACCACCACCAGTCGTCTACTTTTTATACATCCCCA
GTGAAGGCGGATGGACAGAATGGATTGACGTCTCAACTTGTAGTACAACT
TGTGGCAAGGGATTCAAAGTTCAACGCCGTTTTTGCATCACTCCCGAATC
TTTGAATGGGCATCCACCAAATTGTGGTGCGGACAAAGAGAGAATGCAAA
TCATAATGTGCGAACGACAGGTTGTCTGTCCAGGGGATAACgatgaaaga
aagaaagacgGAATTTGCGAGGACAAGACTCCTAATTTTTGCAAGAGAAA
AGTCACACCAGGCAATGGTCGTAAAGAATGCCGACAAAAAGATACGAAAG
AACAAATGACACGTGATTGCAAGAAGACATGCCGTTTTTGCGAGCcttGT
ATGAATTACCACAGAGATTGTCCAGGTTACGCGTCCGTCAGTTATGGTTA
TTGCACTGATGATAAGTACAGTGCTTGGATGGAATGGAAATGTGCTAGAT
CATGTGGTTATTGTAACCAAAATCAAACGAAACCGATGGGCGACGACTGT
TACGATCTTTCCGACAAATGTCCCGATTATGCCGATCATTTTGATGACGA
TTATTGCAATCATCCGAAATACGCCAAGTGGATGTCGCAAGCATGCAAAG
AAAGTTGCTTATATTGCAAAGATTGTACTGACAAAAGTCCTTATTGCGAG
ACGTTAAAAAAGAACGGCTTGTGCGTCGCAAAGAATCGACAAGTCTATTC
CTGGATGGTAATGGAATGCTCCAAATCGTGTGGTTATTGTTTCGAAAAAT
CTGTTTTCCAAAAAGACATTACAAAAGTGACGGGACAAAGACCATAGTGC
CTGTATGTGTATGCAATGGAGGGATGAACGATGCGTATATCTCCGGTGAC
ACAAATGTCGTTTCGACGCCCATCTAACGTTCACGAGGTCCATTTGACGT
ATATTCAACGTTCAATTGAAGTCCACAGCCATTGAATGGTTTTACCTGAA
AGAAGAACATTTgaatttgttaaaaattgacgtttttacTACTGGTATTA
ATAGAATTAACGTTCGACCGATACCATCTGACGGATAAATGGCTCGTTAA
CGAAACTCAAATGAAACCATTGCTTGGTTGTAAAAATCATCATCTACTGT
AAATGAAACAAATAATGGACGGAT
Run BLAST on NCBI

transcript from alignment at sc0000255:93213..116441+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016942 ID=TCONS_00016942|Name=TCONS_00016942|organism=Clytia hemisphaerica|type=transcript|length=23229bp|location=Sequence derived from alignment at sc0000255:93213..116441+ (Clytia hemisphaerica)
cataacgattaatttatacgttgtaactaccttttgtaataagcctgtgt
gacgGAGAAcgtatattttagcgataacacacagaaacttttctactcaa
tcgcatgttcaaactcgatactttaattagggacaccctgtagaaccAGC
GCTAAAATGTATTTGCCGATCATAATTCAAATGGTCACTTTCTGGATGTC
AGTTGGTGGCAACAATGAAGAAATACTTCCACAAGGTGAATTGTATAACC
AGCAACGTAATATCAAGCATTACAAAAGATTTGATGAAACAGTCGGTAGC
AACAATGAAGAAATACTTCCACAAGGTGAATTGTATAACCAGCAACGTAA
TATCAAGCATTACAAAATATTTGATGAAACAGTCGGTAGCAACAATGAAG
AAATACTTCCACAAGGTGAATTGTATAACCAGCAACGTAATATCAAGCAT
TACAAAAGATTTGATGGAACAGTCGGCAACAACAATGGCGGAATACATCG
ACAAGATGGCGGCCAGCAAAGTAGTATAAAGCGTTACAAAAGGTTTGATG
AAAAAACTGGTATGGATTCATACAAAGAAGCAAAAGAAGCTCATCAACAG
AAAACGTTGAAATCTAGCCTGGATAAATTAAAGAATCAAGCATTAGACCC
GTTTCCTATTACATGGAATTATACAGATAAATATTCTAACCGAACATTTG
GTGTTACTCGAAACAGTATTGCGTTAAAGTCACAACCCACTGAATGTGTA
TACGCTGTCAATAAAGTGAGACGTTTACACGGACTTCCAGAATTATCTTG
GGCCACAGATATCGCATATACGGCACAAGAATGGGCGCTCGCATTAGCCC
AGATTGATAAAGGTTGTGAAGCTACTCACGATGATTATCCAAATTTATGG
TTCAATGGAAAAGAAATAAGATTGggtgaaaacatttttctttcagatga
taaattttttgatgattgtGCACAATCAATTGCTGCCTGGTACAAGTAAG
TTCGATCATTCTGTACGATATTGacctacacgcttttttctttataagaa
tgtaaATCCATTTTATCATAGATATTCCTAACTATAATCCTAAAgtattc
ttacaacattcttaggtaaggatcctaattcagactagatttaaacattt
agtacatacgtctcaagcataaattggcatttttgtaaaaggagtgagcc
ttacttgggggtaattggtaatttataattgaaaaatggcattcttagtt
TGAGTAGCCAAATtcaatgatggtgatattcttagcatattcttaatttt
ttggcaattttcatcatggacattcttataaagtgtattcttataaaaaa
aagcgtgtagctgGTCATTTTCACAGTTAACCTAAGTCCAAAATTATCAG
TATTTAGAGCTTCTTAACTTTGGTATAAACTGCAATTATGGACAAAAATG
TTGACACAAAAGCGAATTCTAAGCTGCTTCCCCCTTTCCCCCATTTACAA
TGTCCAATGCTTGGTGTGACGGCCGTGCGGACTGAACATTGCAGCTGGGG
AAAGGGGGGAGacttttttctatatttttactACAAATTCCtgtgttttt
ctcaaacatgTTTGTCCATGATTGTTTTCTCAAATTCTAAACCATTCTCC
TTTTCTCAAATTAAGAGCTAAAAGTTGTCAGTTGATAATCACGAACCTAT
AACCCTACACGAGAAGTGACTACAGTTGAGacctagtttagacggccgac
tttctgccttGCCTTCCGTCGTTTATGACGAAAGTTGACAGTCAAAAGTC
AATACAATGCCTTCATTTGACGtctctttcaatctttttcaagcaaagat
ttgaaACTGCAAATTTACCGTCAATCTTGTGCCGTCTCTCACATCGAAAG
GAGGCAAGGCAGAAAGTCGACTGTCTAAACTAGGTCTGTCTCCCGCttat
tcgaactcgaacgggaatGTTATTTGTTCGAGTTACAAAGAGAAAATACT
TTATAGAAGGTACTAAATGGGGCTGGAAACaagatcgaattatagaaaga
ttcgcaTAAAAGAAGCTCGAATAAGCGAATGTTTGTATATCAACTGTCAG
TCATCCCCGATTAGTGGCGCCACTTACTTTTAACATGTGAAATATTTCAT
TCTGTTTTTTATAAGTGAACAATTCAAAGGTACCCATTACAACTACGATA
AACCAGTGTACAACGTGGATCCGAACGGCCACGGTCATTTTATAACACTG
ATGTGGCCGACAACGAAATATTTTGGTGTGGGAATATCTTATGATTACGA
TATCGAATGTACCTACACTGTAGCTCGTTTTGATGGTGTTCCAAACgaaa
atgatttttacaaaaGCAGGTACAGAATCCCGAAACCTAAAGAAAGTAAG
TTCCAACCCAGCTTGGCACACAacgctgtttcaacgttcatctaacgtta
tatggacgttgtgaacattagatgacgttgaaacaacgttttgcaCCAGC
TGGGAAACTACATTTTGCAATAAACACGAACAGAGTGCTAAAGACCCCCG
GCCctaaaaattactaaaaaaacAAGTAACTTGGCTTACAAATATTGCCC
TGAAACTAATTATGGACTGTGAAGGCAACCATAAgcaactaaaaataatt
tttttttgttatccCGACATTAACATTATCAAAGTCGAGGTTAAAAAGTC
AATCTTGGTTAAATCCATCAGCGAAATTATAAAGGTTGATATCCTAATAA
TCCTGAAAATCCTTAGCAACTCCACCTCTGAAAATTGGAgctgtttataa
aaaatatgtacagGCATAAATCTTCGTATCCAGCGCTAAACTCGAAAAAT
TTTCATCGGCCATCCAaataaagttttatttcatactCTAACTTAAATTA
ACACAATGATCTCAGACTTgtcttaaaagaaaagaaaaattggaagctTA
GCGAAAATTGGAAAGCTGAATAAATGATATACCGTTTAGTTGATCTCTAT
ATTTTAATTCATGTCAGCCATTTCGTCAGCCTTTGGTGATCTTTCAGCTT
ACCAAGATCGAAAATATAatcagttttttattttaatctttcatcttttt
catccTTAAATAAAATGACAGAGTTAAAAAAAGGCATCTGGAATTAGGAC
AACAATACGGTAgttttctcttattttcacAAGGTTTTCCAACTTTCCCT
TTGTTAATGATATAATTAAATATCatctttaatttattttatttttcaga
ggtGACTGTGACAGAGGCTTATTTGACACCGAAGAAGCAACCACCACCAG
TCGTCTACTTTTTATACATCCCCAGTGAAGGCGGATGGACAGAATGGATT
GACGTCTCAACTTGTAGTGTAAGTGGTAGCCAATAAGAATTTTAACAACG
CTGATTAAAGGCCAGTGTAAAGACCAGTGtccggtatcggaattgcaatt
gtttcaattgttttaaaagtttgttttggacacgtgattttaattgttct
ctttaatgacacgtggtttgcgcaatgttatattttactacttttatatc
cctttaacgttagatggacgttgaaataacgttagGTGTCAGCTAGGCAA
CCAACTTCCTTTCTCTTTTGCAGACAACTTGTGGCAAGGGATTCAAAGTT
CAACGCCGTTTTTGCATCACTCCCGAATCTTTGAATGGGCATCCACCAAA
TTGTGGTGCAGACAAAGAGAGAATGCAAATCATCATGTGCGAACGACAGG
TTGTCTGTCCAGGGGATAACgatgaaagaaagaaagacgGTTAGTCACAA
CTTTTTAACCCTTTTAACGATTGCTATTTTCTTGCTAGGTTCTTGGAATT
CCTTTTAATTTTAGTTCAGTTTAGCTTTCAAACTCGGAGCCTCAAAGATT
CTGGTAGAAAGCAATATCAGTACTTTATCCATGGTAGATAATACGTtgtc
aaaaagtgagcaaaatataACGTCAAAGTTTCAGAATACCACTGAAAATT
GCTGGGAAAATAGGTAACCCTTTCCCCCAGCAGACGACCTCCCAACGACT
TTTCACCGTTCTTTTAACAACGGCACTAGGGGAAAGAGTGGGAGGGGGAG
TTCAAATCATACTCTTGTATCACCATTTAAGTTCAGGATTGTACCACAAT
ACAATTATAATCACAGTTATAAATACCTCTAAGTTAATCTAAGTTAAAAC
TACTTATATGTTGATTTGTCTTCTGTACGTAGCACATTCACTGTACCCGG
AAAAAACGGGGCATAATTTTATATGTGCTTAAGAATTCCATATACAAANT
TTTCTCTTTTGCAGACAACTTGTGGCAAGGGATTCAAAGTTCAACGCCGT
TTTTGCATCACTCCCGAATCTTTGAATGGGCATCCACCAAATTGTGGTGC
GGACAAAGAGAGAATGCAAATCATAATGTGCGAACGACAGGTTGTCTGTC
CAGGGGATAACgatgaaagaaagaaagacgGTTAGTCACAACTTTTAAAC
CCTTTTAACGATTGCTATTTTCTTGCTAGGTTCTTGGAATTCCTTTTAAT
TTTAGTTCAGTTTAGCTTTCAAACTCGGAGCCTCAAAGATTCTGGTAGAA
AGCAATATCAGTACTTTATCCATGGTAGATAATACGTtgtcaaaaagtga
gcaaaatataACGTCAAAGTTTCAGAATACCACTGAAAATTGCTGGGAAA
ATAGGTAACCCTTTCCCCCAGCAGACGACCTCCCAACGACTTTTCACCGT
TCTTTTAACAACGGCACTAGGGGAAAGAGTGGGAGGGGGAGTTCAAATCA
TACTCTTGTATCACCATTTAAGTTCAGGATTGTACCACAATACAATTATA
ATCACAGTTATAAATACCTCTAAGTTAATCTAAGTTAAAACTACTTATAT
GTTGATTTGTCTTCTGTACGTAGCACATTCACTGTACCCGGAAAAAACGG
GGCATAATTTTATATGTGCTTAAGAATTCCATAtacaaattgtttttttc
tagGAATTTGCGAGGACAAGACTCCTAATTTTTGCAAGAGAAAAGTCACA
CCAGGCAATGGTCGTAAAGAATGCCGACAAAAAGATACGAAAGAACAAAT
GACACGTGATTGCAAGAAGACATGCCGTTTTTGCGAGCGTgagtctgtct
gtctgtctgtctgtctgtctgtctgtctgtctgtctgcgCTTTTGTAATA
TCACACCATAACACAACCAAAACTGCAACATTGTctccgtgtattccagg
ctttatctacgttactgattgacgccagagaatactaTCTAGCGCTATCA
CTAAGCATTGAAAATGCTGGTAATACACACGGAACGAGGTTGCCaaaact
gtttaacaatttCTATCCGTTTATGACATGTCCCGAGGATTGAGAATCTG
TCGGTATAATATCAAATAGCAATTGTGGATCGACACAAAAAGCGTTCAAA
GGGTGCAAGAATTGTCTTCAAATTTGAGAAACATCCAAATCATGGATATG
GACTATGGATATCGTGCATTCTTTCTTTGCGCATCATATTTAACTAGATC
TAGAGcgataaattttactttcaatacaGCGTTTGTCTGAAAGCCACGTC
GGTCACACTTCATTTCCTATCCAATAATTTCTCTCTAGCCATCTGCctta
aactgattttttttattttcagcttGTATGAATTACCACAGAGATTGTCC
AGGTTACGCGTCCGTCAGTTATGGTTATTGCACTGATGATAAGTACAGTG
CTTGGATGGAATGGAAATGTGCTAGATCATGTGGTTATTGTAACCAAAGT
GAGTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNTAACTTCTGATAAAAGAGAATCATGTTGAACCTTTCATCTCTTAC
CATAACCACGGTCAGAGATAAGCAAGTACTTCCCATAAAACACGGTCAGT
ATTACATGCATGAGAGatcaacaatgatagaaatCAATTTGATTTTCCTC
TTAACtaatatatttaaatattttgactaaaagttcataatttttcttta
acttcTGATAAAACAGAATCATGTTGAACCTTTCATCTCTTACCATAACC
ACGGTCAGAGATAAGCAAGTACTTCCCATAAAACACGGTCAGTATTATAT
GCATGAGAGATCAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNtgatttttcatggaaattcactgcactg
taagggtccgattttagaagccaaattttgggccgaacgtatggtcgatt
tcagatcgagtgccccccccgggggcaatgcttaagttttttttaagatt
tgagcatggatatgcttataagagtTATGGCTATCAATAAAAAGTCGTAA
AGTGTGTATTATCAACTTCAATACTTATTTCACCCGACCAAAATTTGCCA
CAACTTTTTTTCTAGTTCTGTTAGTGTTTATTTCGAAATATTAATCTAGT
GCACTGTAACGTACAAATTCCCAATTATAGATACGATTTCTCAATATgag
gaaaaaatccaaaaaaatttaaatccctTTTTTGGCAATGTCTATAGTTG
ATAAAGAATTTACTGATTACCCGAGTTaggaaaataaaattcttaCTGTT
AATATATGCTGACGgtttaaatctttaatttacATGCGGTATTTTTTAGA
GTGGCGGGACAAAGACCATAGTGCCTGTATGTGTATGTGATGGAGGGATG
AACAATGCGTATATCTCAGGTGACACAAATGTCGTTTCGACGCCCATCTA
ACGTTCACGAGGTCCATTGACGTATATTCAACGTTCATTTGACGTCCAca
gtagtctagcaagctacacgtttttttttttataagaacgtcaaaaattt
tcgaagccttcggatgttcttagttttttggatttgaagcctaaaaatgt
tcttaaaatgttcttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNacattttgatgtaatttcttaagaaaatgcatgtttttaagtct
ccaaagccttagaatgttcttagaatgttcttaaatttttgggcctcgaa
gccttatgttcttatatagtttgttcttataaaaaaaagaacgtgtagac
gactaatttatacatatagtagaaataaagcaaaaagtaatgaatggaac
aattttagtcgtctagaaacctttgtgcactaactccaaacaaaaaaaaa
agagtcaattaatatcgcaattaaaattttttcctgctcaaaataattct
tgagaaaaaaaaatatgtgtggatttgtgtattgaaagtttttcatttga
gttgatttcgttttgagagtttgttNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccag
tcgtttatacaaactaaatcccgtattattattattattattattattat
tagtattggtattattagtattacacgcattataaacgactccagtctac
gtCCACAGCCATTGAATGGTTTTACCTGAAAGAAGAACATTTGAATTTGT
TAAAGATTGACGTTTTTACTACTGGTATTAATAGAATTAACGTTCGACTA
ATACTATCTGATGGATAAATGGCTCGTTAACGAAACTCAAATGAAACCAT
TGCTTGGTTGTAAAAATCATCATCTACTGTAAATGAAACAAATAATGGAC
GGATATTGCCTTGTTTACTTAAATAGGCAGCAACGCTCATTGCAGGACGG
CACTACATAGACCAAGCACGGCATTGTAGAGTTAAATATATCCTTCATCA
GAGAAAGACAACAGTTATATTCCGTAATCCTTCTCCTGATTTAATTCATT
AATCTGCAAATTTACCGTCAATCTTGTGCCGTCTCTCACATCGAAAGGAG
GCAAGGCAGAAAGTCGACTGTCTAAACTAGGTCTGTCTcccgctaattcg
aactcgaacgggaatGTTATTCGTTCGAGTTACAAAGAGAAAATACTTTA
TAGAAGGTACTAAATGGGGCTGGAAACaagatcgaattatagaaagattc
gcaTAAAAGAAGCTCGAATAAGCGAATGTTTGTATATCAACTGTCAGTCA
TCCCCGATTAGTGGCGCCACTTACTTTTAACATGTGAAATATTTCAttct
gtttttttataagtGAACAATTCAAAGGTACCCATTACAACTACGATAAA
CCAGTGTACAACGTGGATGCGAACGGCCACGGTCATTTTATAGCACTAAT
GTGGCCgacaacaaaatattttggtgtGGGAATATCTTATGATTACGATA
TCGAATGTACCTACACTGTAGCTCGTTTCGATGGTGTTCCAAACgaaaat
gatttttacaaaaGCAGCTACAGAATCCCGAAACCTAAAGAAAGTAAGTT
CCAACCCAGCTTGGCACACAacgctgtttcaacgttcatctaacgttata
tggacgttgtgaacattagatgacgttgaaacaacgttttgcaCCAGCTG
GGAAACTACATTTTGCAATAAACACGAACAGAGTGCTAAAGACCCCCGGC
CCTAAAAATTACNGCTACATTTTGCAATAAACACGAACAGAGTGCTAAAG
ACCCGGCCctaaaaattactaaaaatacAAGTAACTTGGCTTACAAATAT
TGCCCTGAAACTAATTATGGACTGTGAAGGCAACCATAAGcacctaaaaa
aaaattttttgttatcCCGACATTAACATTATCAAAGTCGAGCGTAAAAA
GTCAATCTTGGTTAAATCCATCAGCGAAATTATAAAGTTTGATATCCTAA
TAATCCTGAAAATCCTTAGCAACTCCACCTCTGAAAATTGGagttgttta
taaaaaatatgtacagGCATAAATCTTCATATCCAGCGCTAAACTCGACA
AATTTTCATCGGCCATCCAaataaagttttatttcatactCTAACTTAAA
TTAACACAATGATCTCAGACTTgtcttaaaagaaaagaaaaattggaagc
tTAGCGAAAATTGGAAAGCTGAATAAATGATATACCGTTTAGTTGATCTC
TATATTTTAATTCATGTCAGCCATTTCGTCAGCCTTTGGTGATCTTTCAG
CTTACCAAGATCGAAAATATAatcagttttttattttaatctttcatctt
tttcatccTTAAATAAAATGACAGAGTTAAAAAAAGGCATCTGGAATTAG
GACAACAATACGGTAgttttctcttattttcacAAGGTTTTCCAACTTTC
CCTTTGTTAATGATATAATTAAATATCatctttaatttattttatttttc
agaggtGACTGTGACAGAGGCTTATTTGACACCGAAGAAGCAACCACCAC
CAGTCGTCTACTTTTTATACATCCCCAGTGAAGGCGGATGGACAGAATGG
ATTGACGTCTCAACTTGTAGTGTAAGTGGTAGCCAATAAGAATTTTAACA
ACGCTGATTAAAGGCCAGTGTAAAGACCAGTGtccggtatcggaattgca
attgtttcaattgttttaaaagtttgttttggacacgtgattttaattgt
tctctttaatgacacgtggtttgcgcaatgttatattttactacttttat
atccctttaacgttagatggacgttgaaataacgttagGTGTCAGCTAGG
CAACCAACTTCCTTTCTCTTTTGCAGACAACTTGTGGCAAGGGATTCAAA
GTTCAACGCCGTTTTTGCATCACTCCCGAATCTTTGAATGGGCATCCACC
AAATTGTGGTGCAGACAAAGAGAGAATGCAAATCATCATGTGCCAACGAC
AGGTTGTCTGTCCAGGGGATAACgatgaaagaaagaaagacgGTTAGTCA
CAACTTTTTAACCCTTTTAACGATTGCTATTTTCTTGCTAGGTTCTTGGA
ATTCCTTTTAATTTTAGTTCAGTTTAGCTTTCAAACTCGGAGCCTCAAAG
ATTCTGGTAGAAAGCAATATCAGTACTTTATCCATGGTAGATAATACGTt
gtcaaaaagtgagcaaaatataACGTCAAAGTTTCAGAATACCACTGAAA
ATTGCTGGGAAAATAGGTAACCCTTTCCCCCAGCAGACGACCTCCCAACG
ACTTTTCACCGTTCTTTTAACAACGGCACTAGGGGAAAGAGTGGGAGGGG
GAGTTCAAATCATACTCTTGTATCACCATTTAAGTTCAGGATTGTACCAC
AATACAATTATAATCACAGTTATAAATACCTCTAAGTTAATCTAAGTTAA
AACTACTTATATGTTGATTTGTCTTCTGTACGTAGCACATTCACTGTACC
CGGAAAAAACGGGGCATAATTTTATATGTGCTTAAGAATTCCATAtacaa
attgtttttttctagGAATTTGCGAGGACAAGACTCCTAATTTTTGCAAG
AGAAAAGTCACACCAGGCAATGGTCGNGATTAGGACAACAATACGGTAGT
TTCTCTCTTATTTTCACAAGGTTTTCCAACTTTCCCTTTGTTAATGATAT
AATTAAATATCatctttaatttattttatttttcagaggtGACTGTGACA
GAGGCTTATTTGACACCGAAGAAGCAACCACCACCAGTCGTCTACTTTTT
ATACATCCCCAGTGAAGGCGGATGGACAGAATGGATTGACGTCTCAACTT
GTAGTGTAAGTGGTAGCCAATAAGAATTTTAACAACGCTGATTAAAGGCC
AGTGTAAAGACCAGTGtccggtatcggaattgcaattgtttcaattgttt
taaaagtttgttttggacacgtgattttaattgttctctttaatgacacg
tggtttgcgcaatgttatattttactacttttatatccctttaacgttag
atggacgttgaaataacgttagGTGTCAGCTAGGCAACCAACTTCCTTTC
TCTTTTGCAGACAACTTGTGGCAAGGGATTCAAAGTTCAACGCCGTTTTT
GCATCACTCCCGAATCTTTGAATGGGCATCCACCAAATTGTGGTGCAGAC
AAAGAGAGAATGCAAATCATCATGTGCGAACGACAGGTTGTCTGTCCAGG
GGATAACgatgaaagaaagaaagacgGTTAGTCACAACTTTTTAACCCTT
TTAACGATTGCTATTTTCTTGCTAGGTTCTTGGAATTCCTTTTAATTTTA
GTTCAGTTTAGCTTTCAAACTCGGAGCCTCAAAGATTCTGGTAGAAAGCA
ATATCAGTACTTTATCCATGGTAGATAATACGTtgtcaaaaagtgagcaa
aatataACGTCAAAGTTTCAGAATACCACTGAAAATTGCTGGGAAAATAG
GTAACCCTTTCCCCCAGCAGACGACCTCCCAACGACTTTTCACCGTTCTT
TTAACAACGGCACTAGGGGAAAGAGTGGGAGGGGGAGTTCAAATCATACT
CTTGTATCACCATTTAAGTTCAGGATTGTACCACAATACAATTATAATCA
CAGTTATAAATACCTCTAAGTTAATCTAAGTTAAAACTACTTATATGTTG
ATTTGTCTTCTGTACGTAGCACATTCACTGTACCCGGAAAAAACGGGGCA
TAATTTTATATGTGCTTAAGAATTCCATAtacaaattgtttttttctagG
AATTTGCGAGGACAAGACTCCTAATTTTTGCAAGAGAAAAGTCACACCAG
GCAATGGTCGTAAAGAATGCCGACAAAAAGATACGAAAGAACAAATGACA
CGTGATTGCAAGAAGACATGCCGTTTTTGCGAGCGTgagtctgtctgtct
gtctgtctgtctgtctgtctgtctgtctgtctgcgCTTTTGTAATATCAC
ACCATAACACAACCAAAACTGCAACATTGTctccgtgtattccaggcttt
atctacgttactgattgacgccagagaatactaTCTAGCGCTATCACTAA
GCATTGAAAATGCTGGTAATACACACGGAACGAGGTTGCCaaaactgttt
aacaatttCTATCCGTTTATGACATGTCCCGAGGATTGAGAATCTGTCGG
TATAATATCAAATAGCAATTGTGAATCGACACAAAAAGCGTTCAAAGGGT
GCAAGAATTGTCTTCAAATTTGAGAAACATCCAAATCATGGATATGGACT
ATGGATATCGTGCATTCTTTCTTTGCGCATCATATTTAACTAGATCTAGA
GcgataaattttactttcaatacaGCGTTTGTCTGAAAGCCACGTCGGTC
ACACTTCATTTCCTATCCAATAATTTCTCTCTAGCCATCTGCcttaaact
gattttttttattttcagcttGTATGAATTACCACAGAGATTGTCCAGGT
TACGCGTCCGTCAGTTATGGTTATTGCACTGATGATAAGTACAGTGCTTG
GATGGAATGGAAATGTGCTAGATCATGTGGTTATTGTAACAAAAGTGAGT
TAAAAAACACCCCAGTGTCACAGCATCCGGTCGTACTCACACCCCACTAC
AAATTTTGCCCTCGTagttggttgattttttttagatttcgatagaactt
ttttgggaaaaaggGATAAACTATTAGGCTTGACGAGCTTATGTAACTTA
GCAAAACTAAATATACAATCAtgatcgaaatatattgagaattccggtta
ttttaacgttttcaagatttaaagtttcGGCGAAAAAGTCgtttttgggc
tatctctttaatctaatcaaatatttcaatttgggatgggttggcagact
tacaggctatattctcagccttattggactttttttgaatttttggatcc
taagtcttaagtctagctttaaaactctacccttcgaacctactttagag
cacttacaaatcgattgtgttttcaaaacttcctggggaatttccctttt
ttcttaaATATTATGACCTNtttttttgaatttttggatcctaagtctta
agtctagctttaaaactctacccttcgaacctactttagagcacttacaa
atcgattgtgttttcaaaacttcctggggaatttcccttttttctcaaat
attatgaccttgattgtaccaTCATggaaaaaacattcgattatgACGAG
ACGATTCCTGATGCAAACTGAATGTTTTCTTTCATATTTGGCGAGAATTA
TAAGTAACTTTGGGACAAACTTACCTACGAAAATAAGGAGTAATAAATTT
CTGAGccttaaagcgattttaagaaaGTAAGAAACAAGGCATAGTGACTC
AAGAGAATGATTTCATCAAAGTGAGCAGATATCATGTAATGTTAAgattt
ttatttgaataaatAAGCCCAGCGGTACTTAAACTTGAAGAAAAAGACGC
AGTCATAAATTCAAAGGTCCCTTCTAACAGTATAAAATTTCAGTCTTTTA
AAAAAGCTTTCCCGATTATAGATCAAACGAAACCGATGGGCGACGACTGT
TACGATCTTTCCGACAAATGTCCCGATTATGCCGATCATTTTGATGACGA
TTATTGCAATCATCCGAAATACGCCAAGTGGATGTCGCAAGCATGCAAAG
AAAGTTGCTTATATTGCAAAGGTAAAACACTTATTAAGTCTTTGAAAAAG
CCACGTACTACAGACCCAGTGAGACCCCCTGCCCGTccgaaaaatatata
aaaaaatcgtCCTTTAGTAAAGAATATAACCTGAAGTTTTATCACGTACC
AGTCCCAAAAGAAATACTGGTCAAGTCCTTTCTTaggggaactaattttg
acgaacagcaaaaatcctaaaaagttgtaaatttatcaaggaacttattt
tggtgaggtagtatgttttttaaattcaaatttgccaaagttagttctcg
ccaaaaatAAGTTCCCTCTTGAGATAATCAAAAGTAGCATTCTATCACTG
ACCACCTTTAGAGAAAGATAGATTAACTTAGATATCAAAGGACTGACAGC
TGCAAGTAGGAATTCAAGTTATCTgggaaatttctagcatctaatggtat
ttttgtcacGATCCTATGTCCAATATATTTTTGTGGGAAAATTTACCTGG
TAGATTGTTTACTTATTAGATTGTACTGNTGTCACGATCCTCAGTCCAAT
ATACCTTTTTGTGGGAAAATTCACCTGGTAGATTGTTTACTTATTAGATT
GTACTGACAAAAGTCCTTATTGCGAGACGTTAAAAAAGAACGGCTTGTGC
GTCGCAAAGAATCGACAAGTCTATTCCTGGATGGTAATGGAATGCTCCAA
ATCGTGTGGTTATTGTTTCGAAAAATCTGTTTTCCAAAAAGACATTACAA
AGTCAGTAACTACCTTTTATATTCAAAAGTTTCCTCACATTTTAAAGGct
acaactttttttataaggcaTAAGGTAAATTTTTGTGAGGACTCATTTTg
caagaaaatacattttttgagCCTCGAATAAGCTTAAATGTTATGCCTAT
GATGTGATAATGTACTTAACATTTTAAGCATGCTTTTTTTTGTACTTCAg
ataattaaaaatattttgaaatttcgtaAAATGAAGGACAGCATACATAT
GCTTAGGCAatgcttaatttttttttaagatttgagcctggatatgctta
taagagtTATGGCTATCAATAAAAAGTGTAAAGTGTGTATTATCAACTTC
AATACTTATTTCACCCGACCAAATTTTACCACAACTTTTTTCTACTTCTT
TTAACGGTTATTTCAAAACATTAATCTAGTGCACTGTAACGTACAAATTC
CCAATTATAGATACGATTTCTCAATATGaagtaaaaatccaaaaaaattt
aaatttcttttttggcaATGTCTATAGTTGATAAAGAATTTACTGATTGC
CCGAGTTaggaaaataaaattcttaCTGTTAATATATGCTGatattttaa
atctttaatttgCATGCGGTATTTTTTTAGAGTGACGGGACAAAGACCAT
AGTGCCTGTATGTGTATGCAATGGAGGGATGAACGATGCGTATATCTCCG
GTGACACAAATGTCGTTTCGACGCCCATCTAACGTTCACGAGGTCCATTT
GACGTATATTCAACGTTCAATTGAAGTCCACAGCCATTGAATGGTTTTAC
CTGAAAGAAGAACATTTgaatttgttaaaaattgacgtttttacTACTGG
TATTAATAGAATTAACGTTCGACCGATACCATCTGACGGATAAATGGCTC
GTTAACGAAACTCAAATGAAACCATTGCTTGGTTGTAAAAATCATCATCT
ACTGTAAATGAAACAAATAATGGACGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009492XLOC_009492Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016942-exon-sc0000255-1491911889:93213..94207TCONS_00016942-exon-sc0000255-1491911889:93213..94207Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1510915933:93213..94207TCONS_00016942-exon-sc0000255-1510915933:93213..94207Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1575043694:93213..94207TCONS_00016942-exon-sc0000255-1575043694:93213..94207Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1491911889:95378..95607TCONS_00016942-exon-sc0000255-1491911889:95378..95607Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1510915933:95378..95607TCONS_00016942-exon-sc0000255-1510915933:95378..95607Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1575043694:95378..95607TCONS_00016942-exon-sc0000255-1575043694:95378..95607Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1491911889:96462..96580TCONS_00016942-exon-sc0000255-1491911889:96462..96580Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1510915933:96462..96580TCONS_00016942-exon-sc0000255-1510915933:96462..96580Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1575043694:96462..96580TCONS_00016942-exon-sc0000255-1575043694:96462..96580Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1491911889:97527..97692TCONS_00016942-exon-sc0000255-1491911889:97527..97692Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1510915933:97527..97692TCONS_00016942-exon-sc0000255-1510915933:97527..97692Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1575043694:97527..97692TCONS_00016942-exon-sc0000255-1575043694:97527..97692Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1491911889:98216..98350TCONS_00016942-exon-sc0000255-1491911889:98216..98350Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1510915933:98216..98350TCONS_00016942-exon-sc0000255-1510915933:98216..98350Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1575043694:98216..98350TCONS_00016942-exon-sc0000255-1575043694:98216..98350Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1491911889:98885..99010TCONS_00016942-exon-sc0000255-1491911889:98885..99010Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1510915933:98885..99010TCONS_00016942-exon-sc0000255-1510915933:98885..99010Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1575043694:98885..99010TCONS_00016942-exon-sc0000255-1575043694:98885..99010Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1491911889:114584..114733TCONS_00016942-exon-sc0000255-1491911889:114584..114733Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1510915933:114584..114733TCONS_00016942-exon-sc0000255-1510915933:114584..114733Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1575043694:114584..114733TCONS_00016942-exon-sc0000255-1575043694:114584..114733Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1491911889:115310..115463TCONS_00016942-exon-sc0000255-1491911889:115310..115463Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1510915933:115310..115463TCONS_00016942-exon-sc0000255-1510915933:115310..115463Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1575043694:115310..115463TCONS_00016942-exon-sc0000255-1575043694:115310..115463Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1491911889:116093..116441TCONS_00016942-exon-sc0000255-1491911889:116093..116441Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1510915933:116093..116441TCONS_00016942-exon-sc0000255-1510915933:116093..116441Clytia hemisphaericaexon
TCONS_00016942-exon-sc0000255-1575043694:116093..116441TCONS_00016942-exon-sc0000255-1575043694:116093..116441Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000255supercontigsc0000255:93213..116441 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.184979	0.501708	0.25922	0.170143	4.54407	3.62723	2.49973	2.44916	1.21242	0.67325	2.09712	1.51163	0.948737	0.952647	0.975056	1.43805	0.372706	0.772699	0.123625	0.0306332	0.407285	0.256264	0.784407	0.531897	2.70415	2.35403	0	0.025443	0.234226	0.285174
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016942 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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