TCONS_00017065 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017065
Unique NameTCONS_00017065
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length153

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017065 ID=TCONS_00017065|Name=TCONS_00017065|organism=Clytia hemisphaerica|type=transcript|length=153bp
TCAATGACCAAAGAAAGAAAGTAATCTTGCATGGTCTCACCAACGGTGAA
ACAGACAGTTAAACCGAAAACTCTCCCCAGACCTCCAATTCGAATTTACG
AAAATGAAGAGGAcaagcaacaacaacaaccaacaAATCCCTTTCGACCG
GCT
Run BLAST on NCBI

transcript from alignment at sc0000257:320846..321264-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017065 ID=TCONS_00017065|Name=TCONS_00017065|organism=Clytia hemisphaerica|type=transcript|length=419bp|location=Sequence derived from alignment at sc0000257:320846..321264- (Clytia hemisphaerica)
TCAATGACCAAAGAAAGAAAGTAATCTTGCATGGTGTTAGTTTTGTTAAA
ACTCTGTTTTTTTGTAGGAGTTCAAGAAAGTCTGAGGCTTCCAAAAATAG
GGTGTAAAGATTGACCCTAACATAAGAACAGGATAAGAGCAATCTGAATT
TCAACCTATCGAAAGAATCAAAACAGCTCAATAAACTTTACTTGTAAAAA
AAGAGATTTTATTGATCCAATTTAAGTGGATTGTGTCAGTGACAATTAAT
TTATTGCAAGTATATCTCTCATTATATCCACCCTACTATTTCATTTACTA
GCTCACCAACGGTGAAACAGACAGTTAAACCGAAAACTCTCCCCAGACCT
CCAATTCGAATTTACGAAAATGAAGAGGACAAGCAACAACAACAACCAAC
AAATCCCTTTCGACCGGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009538XLOC_009538Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017065-exon-sc0000257-1575043694:321230..321264TCONS_00017065-exon-sc0000257-1575043694:321230..321264Clytia hemisphaericaexon
TCONS_00017065-exon-sc0000257-1575043694:320846..320963TCONS_00017065-exon-sc0000257-1575043694:320846..320963Clytia hemisphaericaexon
TCONS_00017065-exon-sc0000257-1510915933:321230..321264TCONS_00017065-exon-sc0000257-1510915933:321230..321264Clytia hemisphaericaexon
TCONS_00017065-exon-sc0000257-1510915933:320846..320963TCONS_00017065-exon-sc0000257-1510915933:320846..320963Clytia hemisphaericaexon
TCONS_00017065-exon-sc0000257-1491911889:321230..321264TCONS_00017065-exon-sc0000257-1491911889:321230..321264Clytia hemisphaericaexon
TCONS_00017065-exon-sc0000257-1491911889:320846..320963TCONS_00017065-exon-sc0000257-1491911889:320846..320963Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000257supercontigsc0000257:320846..321264 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017065 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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