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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017098 ID=TCONS_00017098|Name=TCONS_00017098|organism=Clytia hemisphaerica|type=transcript|length=327bp
GTTTCAGAAATCAAATTAATAAATGGGtaaatgaatgaatattttcaaat
gaatgaatgaatatattttcaaaactaataACACAACACAGATTATTAGG
GAGATATCATGAGACCATTTTTGGATGCTTGactaaaagaaatatgattg
aTTGTCACTGTCACATATCAGCTCAAGAATTTGACCAGGATCGAGACCAG
TTAATTCAATATGCGCAAAAGGCAGGAGTTGAAGGAATCATAGCAGTATG
TGAGTTCTCCTCTGATGTTCAACCTGTCTTGGATCTTGCTCAAAAGTACA
AAGATTTTATTCATCCCTGTATTGGCA Run BLAST on NCBI transcript from alignment at sc0000259:144659..146812+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017098 ID=TCONS_00017098|Name=TCONS_00017098|organism=Clytia hemisphaerica|type=transcript|length=2154bp|location=Sequence derived from alignment at sc0000259:144659..146812+ (Clytia hemisphaerica)
GTTTCAGAAATCAAATTAATAAATGGGtaaatgaatgaatattttcaaat
gaatgaatgaatatattttcaaaactaataACACAACACAGATTATTAGG
GAGATATCATGAGACCATTTTTGGATGCTTGactaaaagaaatatgattg
aTTGTCACTGTCACATATCAGCTCAAGAATTTGACCAGGTATACATTCTT
CATTATATTTTCCACCATTGTATCACTCTTTGTTGGCTTTACAATCACAA
GCCTCTGGATTAAATTAAGAATACTACATCAGAAGATTTCGTTAAAAGTC
AAGCATAAATTTTACTAAAACACGGTGGTTCAAGGCGAGATAATATTGTG
AAGTAAAATGTTGTATTTTTAACTGAAACGTACTTCTCATTATTTAGGAT
CGAGACCAGTTAATTCAATATGCGCAAAAGGTGAGCACGTGACAGCTTTT
TTACTATCCGTATTTTCTAAGGTCGATTTCTGAAAGTATTGTTGCCTTTT
TGTAAAACGTATCATATTTACAATCTCTAGGTGTCAAATTTATATGGTTC
AACTTCCGAGTCCTAGCGATTTGGGAGTTTTCTCGTACTAACGTGCacat
cactgacctttatatatccctggatatatccgccatctttgatcggagtt
tttttttagaattggtacccgagaagaagcaaTTGCAATGTTAAAGATTA
ACGTCTAGGGGCGCTACATCTTCAAAAGTattcgagggaaagtagatcta
acGCTCTCGacgcatttacaccgctatcgagtagtgccgacattagggta
ccacttttcaaaaaacttcgatcaaagattttgcttggccgggattgaga
aacttgcaGGGATGTATAAAGGTCAGAATTCATTTCACgcattatttttt
ctggaattcattgttttttgatatttttaatgatTCAAGGCAGGAGTTGA
AGGAATCATAGCAGTATGTGAGTTCTCCTCTGATGTTCAACCTGTCTTGG
ATCTTGCTCAAAAGTGAGTAATGATCATTGTTTTCCCAACCTCTTCCCCA
GTCCTTTAAGTCGTTTTTTTATGATTGTAATAGCGCTCACGAAAGGCTTG
TATCACGTCTATCATTAAAATCGAATAATGGTGCAAGTGattctgggtac
gagattgtaTGCTATACCGTAAGTTgttctaatgtcgacatccttCTTAT
AATTTCGActcccttttttagaaataagaataATTTGAAGGTCGGAATTG
CAgatggaaactatttttctttgcttagcgatcagtgaggaaaaaatctt
ttgtctatcagtgatccCGACCTTCCTATTTACCCCATCCCATCAGAATt
aagagggatgttgacattagaccaacttacggtattatTCTTGTGAGAAA
CATTGGTAACACTGATTTTTCCCAATCTCGTTCCCAGGGTGATATGTCTG
TCGTTCGTCGACGATTTTTCCTGGCTTTAGGGCTATTATTTTTATCTCTA
ATACAGAAGCTTAACTCATTAAggccaaagattttaaagaacatttttag
tttcGGTGGTTATCAAAGGGTTCTTGGATGGATAAACTTTGCAATAAAGC
TCAAAATATATTGATCATATTtggttttttaaagtttttcagaatttaaa
atttcagTACTTAAGTGTCAAGTCTAATGATAAAATACTACGTTCCGGAA
GTTTAATAAGAGCATTTAAAGATTATCCgcggtgtttaaaattttgcagg
gaatttccctttttcaaTATTGTGGTTCTACAATCATAGTCgttatattt
gagaaaaaagggaaatccacggggaagttttgaaaccacaatcgatttgt
aagtgctctaaagtaggttggaagggtagagttttaaaactgagttttaa
catgagacgtCAGACTTGCCGGaccaataaggctcataatatagcctgga
gcTCTATAaacccaaattgaaatattcgattaaatttgagagatggccca
aaatcgactttctcgcccgaactccaaatttcgaaaaacgaggaaataag
cttaattctcaattgatttcaaccatgattgtagtaatATCTTTCTTTTG
TACACGATTTCTCCCTCTGCAGGTACAAAGATTTTATTCATCCCTGTATT
GGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017098-exon-sc0000259-1491911889:144659..144846 | TCONS_00017098-exon-sc0000259-1491911889:144659..144846 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1510915933:144659..144846 | TCONS_00017098-exon-sc0000259-1510915933:144659..144846 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1575043694:144659..144846 | TCONS_00017098-exon-sc0000259-1575043694:144659..144846 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1491911889:145056..145088 | TCONS_00017098-exon-sc0000259-1491911889:145056..145088 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1510915933:145056..145088 | TCONS_00017098-exon-sc0000259-1510915933:145056..145088 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1575043694:145056..145088 | TCONS_00017098-exon-sc0000259-1575043694:145056..145088 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1491911889:145598..145671 | TCONS_00017098-exon-sc0000259-1491911889:145598..145671 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1510915933:145598..145671 | TCONS_00017098-exon-sc0000259-1510915933:145598..145671 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1575043694:145598..145671 | TCONS_00017098-exon-sc0000259-1575043694:145598..145671 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1491911889:146781..146812 | TCONS_00017098-exon-sc0000259-1491911889:146781..146812 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1510915933:146781..146812 | TCONS_00017098-exon-sc0000259-1510915933:146781..146812 | Clytia hemisphaerica | exon |
| TCONS_00017098-exon-sc0000259-1575043694:146781..146812 | TCONS_00017098-exon-sc0000259-1575043694:146781..146812 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000259 | supercontig | sc0000259:144659..146812 + |
Blast
The following BLAST results are available for this feature:
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