TCONS_00017106 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017106
Unique NameTCONS_00017106
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1351

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017106 ID=TCONS_00017106|Name=TCONS_00017106|organism=Clytia hemisphaerica|type=transcript|length=1351bp
TTGTGTCaaagagtttttttctttttcaaaaataagatAACTAAAAATTA
TATTGGTTCAACAATAAATCATCATTTTCCTcttctaaaatagctttaaa
tctAGTCATGAAAACCTTAAAACATAATATATAACGTAGCATCTATGACG
TATAAACGTGGATACGGGAACGTTAAATGTGAAATTGTCCCTTATATGAA
ACTCTGAAATGGAGCTTAATAAGCGTGTCACAAAGGGTCACCTCTTTATC
ATCTGaagaactttttgttttgaaaaagttcggACAAACTGAGCTTTTAT
TGACAAGGTTTCAACTTGATAAGAAATAACCGTTTAGTAGGGTCTGAAAG
ACCAGAAAATCTGTAAAGATAAATAAAGATCGATGAGGTTCCAGCGTTTT
TTAGTTTTAGACTTTTTCAATTATCAAGTATTTTTAGACTgtacaaaaac
tcaaaaatttaagcgTACGTACTGTACTGATTTTGGTAAAAATGATCTAT
GTACATACtattattttcagttataagAAGTATCCAACGTTAATCtcaag
aaaaagttttcatttctttctttgacCAGGGAATACAGGAATACGGCATT
GGTGCATCGTAATCAACAACTGCACAAGGATTCAAAGCGCCTCGTTTTCC
AGATCCTTTAATCTCTCGTTCGTTGATTCTCTCGACTTCTTTGATAGCTT
CCAGTAGTACCAGCATCTCTTTACTAGCCTTGGATGACAATCCTCTCATC
GGTTTAGCCTGTGTTGTTGTTATTAATACGGCTACCATCATGATTGATAT
CAATAAAATTGGGATGGACTCGTTTTTGATGACGGCCATACTAACTCCTC
AAATCAATGGCCAATAACGAATCTACCAAACCTTTCCGAAGCTGTAATCA
CCACTACAAGCAACTCCATCCTTCGTTACGTCATTGAAAAATCCATCAGA
ACAACACCGAGTTCTTCATCAACCACAAATTTCATCTTATACGTCAACAT
TGACGGCATATTGAATGAAAAGCACGACAATAACAAAGTCAGAGAGGAAA
TCTTCAAACGACGTCACAATCAAGAATTCCAAGAAATCTATTTTCACATA
TCTTTAAAAACTCTTCTATATGATATTGAATGGCttgaaaaatttgttga
aagctTGGTTCAATTATTAAAATCTTTACTCGTAATTGTTCTCAATGTTG
GTTATTTTCTAACTGAACTCATTGTGGGTCGATTCTCGTCGAATCTCCTG
AATCATCCTAGAGTTATTTGGATAAGTCGACATGCCGAGTTGAAGACAGG
AGAATTCCCGTTTCGCTATGGATTGGTGCTGGAATACGAACATCAATGTT
T
Run BLAST on NCBI

transcript from alignment at sc0000259:272434..291000+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017106 ID=TCONS_00017106|Name=TCONS_00017106|organism=Clytia hemisphaerica|type=transcript|length=18567bp|location=Sequence derived from alignment at sc0000259:272434..291000+ (Clytia hemisphaerica)
TTGTGTCaaagagtttttttctttttcaaaaataagatAACTAAAAATTA
TATTGGTTCAACAATAAATCATCATTTTCCTcttctaaaatagctttaaa
tctAGTCATGAAAACCTTAAAACATAATATATAACGTAGCATCTATGACG
TATAAACGTGGATACGGGAACGTTAAATGTGAAATTGTCCCTTATATGAA
ACTCTGAAATGGAGCTTAATAAGCGTGTCACAAAGGGTCACCTCTTTATC
ATCTGaagaactttttgttttgaaaaagttcggACAAACTGAGCTTTTAT
TGACAAGGTTTCAACTTGATAAGAAATAACCGTTTAGTAGGGTCTGAAAG
ACCAGAAAATCTGTAAAGATAAATAAAGATCGATGAGGTTCCAGCGTTTT
TTAGTTTTAGACTTTTTCAATTATCAAGTATTTTTAGACTgtacaaaaac
tcaaaaatttaagcgTACGTACTGTACTGATTTTGGTAAAAATGATCTAT
GTACATACtattattttcagttataagAAGTATCCAACGTTAATCtcaag
aaaaagttttcatttctttctttgacCAGGGAATACAGGAATACGGCATT
GGTGCATCGTAATCAACAACTGCACAAGGATTCAAAGCGCCTCGTTTTCC
AGATCCTTTAATCTCTCGTTCGTTGATTCTCTCGACTTCTTTGATAGCTT
CCAGTAGTACCAGCATCTCTTTACTAGCCTTGGATGACAATCCTCTCATC
GGTTTAGCCTGTGTTGTTGTTATTAATACGGCTACCATCATGATTGATAT
CAATAAAATTGGGATGGACTCGTTTTTGATGACGGCCATACTGTAAGTCT
TCAAAATcagatttctttttattttctgtgtAATATAGAAATGGGAGAGC
TTATTCTAGATTTGCAAACCACAATCTTTTAGGTGTTACCCTTTAGATAT
TTAGGTGTCTTTACTTTATATTGTCTCTACTACAAATAGGTTCCTAAATA
GTTGAAACATATAGTTATGTTGGGTTGTTCTTTTCTTAGGGAGCCTTATG
GACTTCCTCTTTCTCCCTTTTCTATAACTTTTTTACTAGGTTAGTGTTGG
AGATTGTTGGGTGGTATGAGTGGAAATCGAGCACCTATTTTTGCGCCTCC
GCCCCTTCTCCGGACTTGATATGAGTCTTCCCCACTGGGAaatgggtcct
actccttacgaagtaggaattcctcctttttcaagtTGGAAAGCTTAGCG
CTGTCCAGACACCGCTGGTTCTGTGCACGCGAGACACAGGTACCATGATG
CATAGTGGTGACACTCGAACTGCGCGGGAGAGCATATAGCTCATCGCAGG
CTAGGTTTCACCACTACGCCTAGGTTTCCTCTGGACTTAAGGCTCACTAT
GTCATCTTGGGAGATCAAATGGATTGGTTTGGTCGGCTCCCTTTCAGAAT
AATCGAGGGGAGGAGAGGGGAGGGATTATTAGTTTGAGACTGAAAACTGG
ACTGGAGaattacttttaaaatttgttgtggtggtttttcagtttttcgt
cTTATTTCGAGAGTTTATATACCTTTTGAggtacaattttttatttttgt
gatgCTGGAACCCTTTCTGGGTTTCATTGCTCCTTGTAactcttaaggcc
ggtctccactttcgcctGACATGAGcagagaaaactttttgacgtttttg
taaggtcgttgtcggttgaaaaatgaaccaattccattggtcgaaattga
cgtaacgggtGAAacaagtagaacttccttcaattttcttttgttcgcgc
gaaacttttttatgggacgaaatcttttcttcaggcaaaaaaggttaaga
tcAAACTGTCGACCATtccgcgcgaaagtggagaccggcctttagagaCA
CTTTTGATTGAAACCCCATTTGGATTATTTCTCCCCATGATTCCTGTCAA
ACTTAGAccagagtctacttctggctgaactttgctttttgataattttt
tatgacgctgagtccagtcaagtagactaggagcatttggcgaggtcgcc
attttgaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNcttccaaaaacaactaaaatctggcggactgttt
tacagtccgcctaggcaaaagcatattaccatatactaccgggccactta
tcagcgccaaaaagtctataaaaaagctctaagtggaccccgggctatgT
CAAACTCCACTCAAAGTGATGCAAGCGGGCGGCTCTGGGTACACGATTAG
GTTTCTGCCTCtcttaaatttcaaatctcTAGTCGATTTCTCCCGCAAta
aaacctgaaaataaaattacaCCTTTTTACAGGTTCATTTTACAGAAAAA
TATCTCTTCAACCTTCTATGTTGCATAAGAAGATGTGTAAAAAATGTACT
CGGTTATGGCTTCATTTACTTCTACTATAGTCAAGAAAACGAAATTAGAA
CCAGTTTCCTTTTCAACTAAAGTACTCCTAAACTTCTCAGCACTGAAACA
AATGGGCATTGTTTTCTCAAGGGTCTGTTTTTATTCGTAATTAGCTTtca
gtttaaaaacatttaaaaactagAATGGATGAACAGTAAGCAACATTTTA
TCCGTTCTGAGTAATATTTTGAGTATGGTATTTCCTGAGTAAAAGAATCT
TGGCGAGATTTAACGAAACTTGTAAAGTGCCTATaccttttaaatttatt
ttgtagATATAAAACTCGGAAGAACAGTGTGTTAATCCAAGGATTATTGG
ATAACTTTGGAGAtgaatgtttttaaattcaagaatTGCTTATAAATCAT
TAgtgtttgagaaaaatttttctatACTAACTACTCTTCGTTTCAATTTG
TTGTAAATATTTTGGGATTAGGAGAAAACTTTATCCTTTAACGGCAGaga
tttttagtcatttttaaCCACTtttattttgccattttttaaaaGGATTT
TCTAATGGTTGGAAAAACAAAACGTTTCACCTTATTGGAATTGGAatcgt
taaaggttttattttcacataAGTGCTCCCGTTTCAAATCAGACAcacat
ttcatatcaggacagtgtctccctattgttatattatgctgatataagca
aaaagtgTTGTTTACCCTCTTTCTCCccgatcttgctccacatccatgtc
aattcaatatttaaaagcttgtaaattaaaattgatgagtaagcgaACGA
TATGActcatatttcaaaacaaaacctttaaaggaagaatttttcgcgga
atttttttttttgacaaatttagaTCAAAATAGGCCATTATTGTAAACAA
AGAATTCTCTCAAATTAATTCCACAAAAAATTCTTCCCGTAAAAATTTAT
TTCCTTATTAGGGCATGGTTTTCTAAAAAGGTATCGTTCTGATTAATAAC
GTCGGAACGTCGGTGTAATAACGTCAAAATAGAAAGCATTCAAAATTCAA
GAAGTTATTTCCCGATCCTAAATTTACAACGATGTACCTGTAAAACAACA
AGTTTAATTTGTTTCGTCTGATAGATGACATCATAACTTCGGACGTGGAT
TGTGTAGATTTGAAAAGcttaaaaatgcaatttttgccTTTCCAGGcttg
taaatatgtcaaaattacccggggaggggtactagggatgaggggtatgt
gcggatgggacctccaaaaaccgacccttagagagactgatctaaatttt
caaattttcaaaggctttctcatttgttttttgattttttgcgcaATGAT
GCAGAATGGCAATTCCATtccattttcttatttgataaTGGGGATAGTGA
GCATTTCATTTCATCTTTTTGATCTgtcaatgattttttaattgtattgt
ttaaaatctgacggagcctgattttcgaaaaaataattttcgggTCATTT
TCGAGTACAAATATGTCAATTTAGGGATGTAGAAATGGGTCAAAACcatg
tttgaataaaaaaataatacaattATTGTTTTATATCTAAGTTTTTCTTC
ATATTATACTTCCTTACTgctacttgtttcaaataaacgctCCTCCTAGA
gggaggcgtttattcgaagggaGCATTTATTTGAGGGGCGTTTAAAGAAA
GGGCGCGTCAATTCGTAAGTAATGCGGtattagctttttctgattttttg
cataaacaGAGGGAAAGGTTCTCTAACAAAGTGGTTTGAGAcagtttttc
ccggaaaatttttttttagccgtaaaaataagatatttgtattcggggaa
attcccttcCGTCATTCTGAAAATTATTTCGCGATTAGCTCGGTATTGTT
CACTGttatttttgtttgtattttttttctattggtgacattttttctat
tttcttcttACATTCAGGTAGgttcattcagcatgttgcttgtctatttt
aaataagatttttcaaaggcaTAATTTCACAAAATCTCTTTGCAGTGGTC
GTATTCTGAAAATACCCAAGGGAAAACAGAATCGTTGCGTTTTTATCTGC
CGAAAGCATCTATATCAAGCGAAAACCCCGTTTTTGCCTGagaaagaaac
tgaaaaaatgaCAATAGGCATGGATTCAAAACCTTGTTGTATTAATAAAA
TTCTAGAATCATTTTAGTCTTTGATAAATTCATATGCACCATCAAGATTT
TTGACattctttaaccctttccgtgccgatgtcAGCATAAGCCGacattt
gaaaaacttttatcatattttcccctacaaataggtcgaaccttaaaaaa
aacGTATGCCAGTTAAAGAGTCAAGAAGGGCTGAAGTAAAATCTCGTATC
GATTCAATGACTTCCCAAATTCTATGGAAAAATTATTTACATATTTTGGC
AAAATACAAAATTCGGATTTTTCTTGAGGCTTTGTGCTGGTAGAGTGAAT
TGGCATGTCCATTGAAACTGATTTTGCCATCGAAGGACTAGACGATATTA
CCGTCAGTTAAAGTGATaaataaaggcgggaaaatatacATGCGCAGAGT
TTACAAACGTGATGggctaccctgagtatcagaggttaagttttcaaaga
aaatagtaacctgtgaagacaaataatagaaattttatcgcgcatgtgtc
aatctaatcactgtagagaaaatcaaagatgaagagcaaatattaccata
ttaatgtctagcagactgtatcagtatgcagtttactatttacgaattcc
ccagaaacctccaagtgtagtNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagtaattactaaa
cttttaattatgaaaatgtcactttaattgaatcgaaataatagacagac
tttatgttatgattctctatcactgactctttttacaaagcgttgatgac
tttttgtaagttgtgttttcaacgacgggaataaaaatatcgactatgat
gctcatccaagatcttggatggtcgtcatggtgacttttgtcttcgctga
ttgcgcgatgaatagaatctcgattcgtcggcacagcgtaaatatatNct
tttgtcttcgctgattgcgcgatgaatagaatctcgattcgtcggcacag
cgtaaattatgattttgagctgtgcttttcacggtagtgaTGGGCGGTAT
ACCGAAAAGAAACGGCGGTAGAGTTTCGAAGACCGGCTATAAACTTTTTT
cggcaaaaaacccgtttgtgaattttcttcggctttgagCTTTTGGGCTT
TTATTTAAGATGGTTATTTTTCGTTGATTATAGCATAGTTTATGATAGAG
CTTGAGTAGAGTAGATCTCTAAATGGAGCCATTTGTTTGATTTCCTCCCG
GAATTTGACGATACGTCTTCAAAGATGCAATTTTTCGCTgaagcattttt
gagaaaagttttaacgaaaaaaattactttcaggAGATGTatcgaagagt
actatcgattagatGTATGTCTGGGTCTAGGGGTTTGGGTCTGAAATTAT
GCCGACTCAGCAGAAAAGGGCCAGAACAGCTGATAAAAGTTGACGATTGA
ATCGATATTATTGGAGCAAATGAAACTGtttatcttttaaaaatttcata
tcATTAAACCAAGCTACAACTACATCAAATGAAAGTCAAATATCTTGTAT
GTAAAAAATAAGTATAAAATGGTCTAcacattgatatttttaaagcctaa
ttcatgatatgcaccatcgCAATGTCTTCCGCgcacccaacagctgattg
gtttaaagtgacgtattttcatcacttacaaccaatcagcttttgGATCC
CTGATgaaatgtcagaagacattgcaatggtgcatatcatgaattggatA
GATAAAGACATTTTATGTCAACAGTTGTGTTTGAGATCAACCGACTCTAA
AAGATTGCAACGACAGCATCTCAAGGACTGATTTTGATGGGTAAAATGAG
CAGCACAGTTATGTAGCTCTCCCTTAAGAGTGTCTTAAAAGTCTCTCTTA
GGATTGGACTAGCATTAGGATCGTAAAATCTAATTTCATAAAATAAGGAA
AAGTCCCGATTTTTTTCCCTCAGCAGATATGATAGAGGAGTTGAAAATAA
ACTGCAGACACAGTCGTCTTAAATGTCAACTTCTGGTACAAATCTATTAT
TATAAAAGGATACTGGAATTTCTCTGTAGTCCTTCTTCATTGTCAAGTAT
CGTTTCTTACTATGACGATCTCTAACTTCATCCATGATTTTAAATCCATA
AGCATCCAACAAGATTGCCACCCTCTTATCATTCGatgatttttcattta
aattcgTTTTCCTTTTGTTGAAGAAATCTTCATCTTCTTGTACAGCCCAG
TTCACATTCTCTGGATCGCCTCTTTTCTTCTGTAATCGGAAACTTCTGGT
TGTCTGGTCATTAACACCTTTGATTGATGACCACGCCTCCTTCTTCATCA
TTATTTCATCCCTCTTCCAATTTCCATCTCTCGAATTTCTTAACACAATC
GTTGTAACCGGATAGCCGTCATTACGGGAAGACCCCATTTGTCCAGCAGG
TAAACAGTCATGAGTTTCAATCAATAACACTGGAATAAAGAACAGAAGCC
ATGACCCCATCTTTTTATCTTGTTGTTAATTTGATATTCACTCTTTTGGT
ATGTTAATCACTAAAACGACAAATTAAGTACTAATCATTCTAACCAAATA
TGTATGTATAAGTCATCTAAGTTTTCTAACTCAAAGAAGACGAACACGCG
ATATATTAGGAATCCCTCGAAACTGATCCTAGAGAACCAGATTGTGGGAC
AAAGAAAAGGAATCTTCCGCTTTACTTTGTACGTTCATAAAACCTCTTAC
ATCCCAGACAGACGTCTATAAGACGTTTTATGAATCAATGTTACACCCAC
CCTTTCCCCCATTCATACGTTTTACGGATGTTTATGTCATCAAAAGCTGG
CTCACTAACCGAGTCAAAAGTTTCTcctttttttatacaaaatattgaaa
ttcttcCATTCATTGACCATATGctatttacaagttttttttacaaTACA
ATCATTTTTTGATTCACTGTTTCTCTGTGAGATTTgtaaattcttcaaaa
ataaattttcagattttttgaaaatatttatttttgcttCCCACTACAAT
ACAGGCGCCCTAATCCTCTTATATTAATTTAACGGTTATTGTCGTCAAAA
ATGAAAAGCCCATTTTTTCCTAAATTCTATCTTCTATGGTCCCTGAAAAT
TCATTCAAGTCAGTAGAAATTCAGAGGCTGagagtttgatttttgatcaa
aatttaagaaatgataaaagaaaaagactcAAAAATCAACCATACAAACt
cgattattttgatttttttgatcaTGTTACCTTATACTTTCCAGAAGCTA
AAAGTGATACCCTTcacgttttttggacctaccccggtggggtggaggtc
ctataaattaacccgtgttcgttagttagttagttcgtttgttcgttcgt
tcgttcgttagttaccaacttttctcgagattggctcattcactcaaggg
gattaaggcggggtcaaaatgcttgcaacgttacaaatcattttcagaag
ctcattttgggctcaaacgaagcgtatgacgaagtagaataggattcagt
ctaggcagatgttttttcattttgaaattttgcgtaattcgcaaaaatcc
tcaattttgcgctattttgatgacgtcatgaaaattgaaatcccaataac
ttttgatagaattatcaaaaaaatttcaaattttgaccaaaaatgcatAT
CATTATTGTTTTTAggatcaaaaaaaaatttcaataaaatttgatgacgt
catcacttttcagccaaaaaactaaaatccttaaaaaatgctgacgtcat
caagattttgaaaaatttttgaaatcttttgaaaattagcatcgaaatgc
atctttggtgaaagtttcaaattattttgatgattctatcaaaagttatt
ggaatttcaatttttatgacgtcatcaaaatagcgcaaaattgagtatta
ttgcgaattacgcaaaatttcaaaatgaaaaaacatctgcctagactgaa
tcttattctaattagttatacgcttcgtttgagcccaaaacaagcttctg
aaaatgatttgtaacgttgcaaggattttgacctccacgaacccgcctta
atcccctggagcaatttttctgattttttgcacaaaggtgcattactata
aaccctcgaatgtgacggagcccgattttcgaaaaaaaattttttccggc
cggtagaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctttccaatgataccaa
atttataaagattgaagaattccttcaaaagttataggtaaatgaaaaaa
gagtgcacacttatcgtgaatagactttaaatcgaaatttaaaattatac
attacttccattaaattctaattattcgttttataaataggtaggtccat
taaagtattacttgcttataagaacatccaatatttttgaaaccatcgga
agcctaaaatgttcttaaaatgttcttattttcaccattttgtgagtact
tttgtgcgatttcctaagaaattaggtgttttcTGTGTGTGTGAGTCTGT
GAAACCTtagaatgtttttaacttgtttttaatgttttggcCATCGTATC
TTCGtatccttatgttcttacatagtttgttcttataaaagatgaGTGCA
CAGTAGCGATGCATGTGCTCCCGATGTGCTTCCTCCACATTCAAGTTACT
ACTCTTACCATCAAAGTACCCTCGATAAGAATTGGGTGCTCAAACTTTTA
TAGCTATTCCTTGAATTTTAAACTAATGTTTGCATCCTGGCTTTTAAAAA
TGGCatgaaaatttaattcgaattttaaatttaaaatgtaaaattatatA
ATACGTCAACATTCTTTCATTGTCTACATATTTCACAATTCATGTTTTTC
TCAATATTCTTTTAACTCTAGACTCACTGGTTTGTTTTGAACGAGCACTA
TCTATATAGAGGAAAATGTTCACACCTCGCAACATACAAAATGAAACAAG
ACTCAAGTTCATGGCATCCTTAGATGTCGTAATCATGCTCAGTAATCTAA
ATAAAgttaaaatgacgtcaattttcttATCGGAAACACCCAAACAAGAG
TTAAGTTCTTCAAGATGATAAATAACGTAACCTAAACTCATTTAAGGATT
TGACCGGAAAACTAACCGGTCACCCACTTCTTTCCTTGTTCGAAAAGTGG
GGGGTAATTGAAATTGCATCAACTATGTGCGAGTTCCAGAGCTTATGACC
AAAAGGATTGTTGAGCACAGATATCTTAAGATCAATAAAGAACAAGAAGC
CGAAGCGGTGGTATGAAGTAATAAAAttgaagcccgaagggctataaGTG
AATCTCCTAGGTAGGTTTTGAAGCCAttaaatcctacctaagttgcGTGG
CCTAGCATGGTCCGGATGTATTTCACACAAATGCCAGATCGAAGGCCCGA
TGCTGGGTCAATGAGAAGGAAAAGACACTACTAttaattaaatttccata
cagggggtggacgaatcTTTTtgaggcaaaaaaaaattattaaaaacgtG
GTGATACTGCctgaaaaaatggcaaaatttgcaaaagaagtcttggaaaa
attattttcataccaTAAAGTCTtttacccctggaaattttagaataact
ttacctgctggaaaaatgaaaatactggAAATATTGGTCCACCCTCCCTG
TATGAATATAAAATGCCCAATAACATAAGAAATCAGTATCAAACAACAAA
GCAGGAGATAACGAAAGTGGATTCAATTCAAACTGATTAGATTAAGGACG
TGATGTAACCAAATTAACATAGTCTGAAATGCTTTTCAACGTtgacttga
aactttttgaagatttctatTATACAGTTTTCGAAATGTTCCAACTCAAG
TTAGATGTTTCTATAgtgataaaataaaatgttctTCTTTCTCTTGGAAT
TTCAAAGAATAACTGATAAATGATAACGTTgggttgttgtttttcttttg
aagcCTTATCTGATCTTCTGATGGTGggttggcggccgcccacgctagcT
CTTAAGAAGCTAATTTCCCATCGGAAAGAAACACTAGTTGCCCTTTGATG
CGCTGACATCCCCAtttgtaccctgagtatcagaggttaagttttcaaag
aaaatagtaacctctgaagacaaataatagaaattttatcgcgcatgtgt
caatctaatcactgtaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAGCTGTGCTTTC
CACGGTACCCCATTTGGTTTAAATAATTACTCTTTAGCTCAAACCTGAAA
ACTGTAGCAGAAGAACCCGACGATCTCTTCGTccgataaaaacaaaaaac
gactCCTCAATTACCCACGGCAAAATCCGTTCACACTCCCTCCCCCATGG
TTAAAATTCCGTTAtccaaaccttccagatgttaaaaacctttcaaaact
tcaaacttttatAGTTGTGTTCTACATCAGGTGCCAGTTGAATGAGACTC
TGTTTACTGATGTATCAACCTAACAGCCTACTACAAATATGTTCAAAATT
GTTCacctttttattttcaacttcaTAATTTAccttatttcaaaaaattt
caactgcaaaaactttaaaattcaaGTGAAATTCTTCCTGAAGTATTATT
AACATTCCATGGGAAAATAGTTAAATTTCAAGAGAGACAATTGGTTTTAT
AGTGAACAAAGCAACCTTGAAGAAAGAAATTCTTTGTTGACAATGATGTC
TGTTTTCCATTTCTCATAAGCATACTTCATTCATTATCTAAGGTTAGTTT
CTTACAAAAAgtaattcaaaaaatcaaaaaatggtcACCGGTTGTTGGGG
TGTTGCTATTTAGTATCGATAAGCAAAAGTTCGAATTTGTTGAATTTATG
ACGCCCCAACGGTTTGCGTAATGGTTTCATTTGGGCTATATAGCGTGATC
TATTATCAGTTCAAAAAGCGTGATATGTGATAGGTGAGGAATAACTTTGG
CTTAAAGGAGCTTTCAGATTTTTTCGGCGTGGGTGGTGTGATCTTTGACG
TTCAAAAAGCGTCATACGTGATTGACGCGAGTATAATGTCGGCGTGACGT
CGTAATTGCGTGATTGTCTTGATTAGGGACTCCGCTGAGGAGCCTCCTTC
ATGGTAAAACCTAACGAGTAAGCTTCCTAATTTTGATGTTCAAGATTCGA
TTCCTTATCTGTTCTTCTCATTATTTTCATTTGAGTATTATATGATTTTA
TTTGAGAAGAATATTGTGCTTATAATGGCTTGAAAGAAAGTGTAGTACAG
TAGAGTTTCTTGCTTTCCATCACCTGGAGTTTTTCACATGGAGATTTGCA
ATAGTACAACAGAAACTACAAACTTAAGCTTACAATAATATTCGACTTGT
TtccgattttttataagaaccgaGTGCATTTTGGCTGAGCCTCAGATTTT
CTTACtcgtttttgattttcatagcaAGAGTTCTTTAATTGTTTAAATAT
ATACTTCGATgagaatttcaatcattttcaatttctagattttgtaaatt
ttagaGCTTGTAGTAAAGTTCAATAGCTTTCAATAAATCTGAGGCCCTTG
TTCTTCTTCTTAagttgttctaataaaaaattgtGTATTGTTTGGTTTGG
AATGAATCTTTTATTCCCAAATAATATATAGTCCACAAGGGAAAATAACA
TGAAAATGTCTGAAACAAACATTTTTCCCcgagaagaaatattttgaaaa
ataatttgaaaataatacttAGGAAATCTGTCtgaatttaatgaatttct
cCCTTAATAAAGATTACAAAGAGAATGAAACATTTCTCGCAGCTTACTGA
TAAAAAGTCTGGTATGaaaattgttaatgaaaaagattttggtcCCATTC
ATTCAGCAGGCATATCAATTCTGATTCCTTGTCATACCATGCAAGaaatg
attaaaaataatttatataagGCCGTAAcagctaaaatgtcaaaatattt
ttccgtaaaaacgctggaaattttttctttttcataatgtatcaaaaaaa
ggaataaaattataaaaaaatatatataattggAATATGATTTTCGTATC
AAAGTAAGGAGCCTAAACGTTATATTCCATTTATTTTAATGAgatttttt
tgtaataaaaagATAAGAGGAGCTTAAAATTCGGATAAAGGAGTCTTAAG
AAGTGGAAtaagcaaaagaaaaattactttcagagAAGAGAATCAAGACG
CAGAAATAACATgagaaacttgaaaattttttacattttatcaTTCGTCA
TACTAAATGTAACATTTTCGTCGGAACTGGGAATGAAATCGTTTGGTATC
ATATCACCATGCCAACAAAATAGATCATCATCTGGGAATTTTACTAACGT
AAGAATGATCACATTCAGCTAAAAAGATCAGATGTCTaccgggtaacttg
catcagtggaggctaacatgcatagccctcaaatgaatgacctgactggt
cattaaaatacaaagttaaatcaaaacaaaaatggtagAGTAGAGATGCG
AGTGGAGCTGCgcagttgtattttaatgaccagacaggtcattcatttga
gggctatgcatgtttgcctccactgatgcaagttacccgatctcacggta
tcaATCCTTGGCAGTCAAACCTTGCATATGGGGACGGTGTACGAGTGTGA
CGGTGTGACGGTGTGACGGTATCAGCCTTTCTTTCCGTCGGTCTTTCGGT
GTTAAAAGGAAAAGTTATAGTATTTCGGTGTTGACAGTGACCCAAGGGAg
atttgtcggtatttcggtcaCGCTACTCCCGTATGCCCCCTCATGCATAG
GACCTGATATTTTTTGAACAGCTTGGATTGAATAAACTTTGACTTACAAT
ACACCTATCACTTTACGTCACAAACTAGGTTTGAGTTTGCCAAGGTTGAC
TGACTTTCTTTGACCTAAGTAGAATGGAATTTAGTCCCCATTTCATGCAA
ATTTTTGGGCAAGGGTTGAAAGGTGTATTCAACTCGTCCATCTTATGATC
TACTCATCTCTGAAATCTAATTACTCGACCGGATTCAAAATTGGACAAAT
GCATATCTAGTTTGTTTTCTATGTTGTGCCTTGTTGTTTTCGTTTCCGAA
TTTTAGTTTTCAAAGACTATAGAcactatcaaaagaaattttacaaGATA
ATAGACTATCTGCAATcaaggtcgtaatatttgagaaaaaagggaaatcc
accgggaagttttgaaaccacgaTCGATAAGTgatctaaagtaggttcga
aaggtagagttttaactcggagttttaacgctagacttaaggctaaggac
cttaggatctgaggatccaaaagttcaaaaatagtccaataagtctcaga
atatagcctggaagtctgcccaCCCCTCCCagattgaaatattcgattaa
attaaagagatatcccaaaattgactttctcgcctgaactttaaatcttg
aaaaaagtcaaaataaccAGAATTCTCATTATATTTCAACCAGGATTGTA
GCTTTATGGGAAATTATATATGTATATTACTGATAAGCTATCTCgttttc
gagaaaaactttcaTTTGATAGTTCGTTTTTATTTGCCTTATTTGGGAGG
GGTGTTTTCTGGTAAGACCCAATCTTATCCGTTGAACATTTTATCACTCT
TGTTTTAGAACTCCTCAAATCAATGGCCAATAACGAATCTACCAAACCTT
TCCGAAGCTGTAATCACCACTACAAGCAACTCCATCCTTCGTTACGTCAT
TGAAAAATCCATCAGAACAACACCGAGTTCTTCATCAACCACAAATTTCA
TCTTATACGTCAACATTGACGGCATATTGAATGAAAAGCACGACAATAAC
AAAGTCAGAGAGGAAATCTTCAAACGACGTCACAATCAAGAATTCCAAGA
AATCTATTTTCACATATCTTTAAAAACTCTTCTATATGATATTGAATGGC
ttgaaaaatttgttgaaagctTGGTTCAATTATTAAAATCTTTACTCGTA
ATTGTTCTCAATGTTGGTTATTTTCTAACTGAACTCATTGTGGGTCGATT
CTCGTCGAATCTCCTGAATCATCCTAGAGTTATTTGGATAAGTCGACATG
CCGAGTTGAAGACAGGAGAATTCCCGTTTCGCTATGGATTGGTGCTGGAA
TACGAACATCAATGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009565XLOC_009565Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017106-exon-sc0000259-1491911889:272434..273275TCONS_00017106-exon-sc0000259-1491911889:272434..273275Clytia hemisphaericaexon
TCONS_00017106-exon-sc0000259-1510915933:272434..273275TCONS_00017106-exon-sc0000259-1510915933:272434..273275Clytia hemisphaericaexon
TCONS_00017106-exon-sc0000259-1575043694:272434..273275TCONS_00017106-exon-sc0000259-1575043694:272434..273275Clytia hemisphaericaexon
TCONS_00017106-exon-sc0000259-1491911889:290492..291000TCONS_00017106-exon-sc0000259-1491911889:290492..291000Clytia hemisphaericaexon
TCONS_00017106-exon-sc0000259-1510915933:290492..291000TCONS_00017106-exon-sc0000259-1510915933:290492..291000Clytia hemisphaericaexon
TCONS_00017106-exon-sc0000259-1575043694:290492..291000TCONS_00017106-exon-sc0000259-1575043694:290492..291000Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000259supercontigsc0000259:272434..291000 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.372796	0.253268	0.0351749	0.137653	0.0700494	0	0.185435	0.375124	0.944759	0.972807	0.15737	0.88967	0.961451	1.72457	3.6163	2.89643	1.49496	1.70794	0	0	4.35465	4.39525	2.6496	4.08036	4.42676	4.46522	0.142451	0.0760138	0.206887	0.351309
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017106 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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