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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017189 ID=TCONS_00017189|Name=TCONS_00017189|organism=Clytia hemisphaerica|type=transcript|length=2631bpRun BLAST on NCBI transcript from alignment at sc0000260:212746..232916- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00017189 ID=TCONS_00017189|Name=TCONS_00017189|organism=Clytia hemisphaerica|type=transcript|length=20171bp|location=Sequence derived from alignment at sc0000260:212746..232916- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00017189 vs. Swiss-Prot (Human)
Match: CAD23 (Cadherin-23 OS=Homo sapiens GN=CDH23 PE=1 SV=2) HSP 1 Score: 285.419 bits (729), Expect = 1.274e-79 Identity = 235/831 (28.28%), Postives = 404/831 (48.62%), Query Frame = 3
Query: 3 RETRSFYEFTVQAADHG-DVPNHQAFVA---VKISLIDVNDNNPIFTSVK---YQKAIFEDTTSLQPFLQIWATDKDIGSNGQVEYSITGGDPNSNFYISPE---GGQLRVRTSLDVETKQKYNLTITATDHGTPPLSTQIHVEIQVKDVNDNFPIFVKQKYSFDIMENATVGLFVGGIVAKDKDITALLSTVYYDWNNTNTNRDFRIDEMTGRIKLATTLDYETQRMYSLVAIAYNK--DIFEQRSMVTHVFVDFHIFDHNDNAPVFPPYCCNVSVSEKFPVDGVIYTFYATDADGPTNNQVSYVLDPNSGDNEFFHLSTN-GQLRLEKPLDRETKDELVIEVQAIDNGDPAMSTTTDFRITVTDVNDVTPRFREIE---IKALSEDVKEGTYIATFSADDEDLGASGVVSYAIISGNENGD---LVLNSTSGVLETFKYLDYERTPEYKLKVQAKDGGGDTALSVIKEFVVPVININDNIPLF--PTNIKPQVEVM---ENAPIGTSVTTIQ-ANDADGDQ---IYFFIVGGNSDDYFTIGHKTGELRTNKILDRELNSSFVLKIEASNRNTSTYNTGSRRRREIDHQVITEDFNITIGDENDNPPVFTKNLFIGGISDKAEYGTKVLKLIAIDADSPSETVLAYS---------LEDGSSTTGK-FSIDVNTGWIKSQSLFTESTQLVYNFEVMVKDNGGVGNFSHDSTNVKITVVTDAQRVLITMRTNPDWVRTNQSDFITKLENVTGCIVNIDGIRFATLENGDSDTTRTVLIFHTMNRETGEVKNRGIVLKAIEENYHLIKDFFEYWNVTTYEGQPLPQIAENDD 2381
RE + YE T+ D+ D+P V + ++++DVNDN P F Y + I E T + + A D D G NG V Y++ P Y+ E G++ ++D E N T+ A+D+G+PP + +I V +++ D+NDN PIF + Y + E+ VG + + A D D + + + Y + + F I+ TG I + ++LD E + Y L A+A + D+ R V V + D ND P F + SV E P + T ATD D N +++Y L+ E FH+ + G + ++PL ++ ++ + V A D G+P + TT + V DVND P F I + E++ + + A D+D G +G V Y+ + N D +++ SG+++T + LD E Y L + A D G ++ V + +I+DN PLF P PQ +++ E++P GT V + A DAD +Y+FI GN + F + G L + LDRE + F ++AS+ + T G ++ + ++ + + D ND PP FTK + G++ A+ G+++++++A+DAD + +++ YS L + S G+ F++ G +++ LF + + +++ +D G +D+ + I ++ D QRV I + PD VR + +FI L N+TG IVN D ++F + G + +T L+ H +NR+T + + V++ I+EN +++ F +NV + QP + DD
Sbjct: 2248 RELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNVLDVNDNTPQFKPFGITYYMERILEGATPGTTLIAVAAVDPDKGLNGLVTYTLLDLVPPG--YVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDVPVGTIILTVTATDAD-SGNFALIEYSLGDGESK--FAINPTTGDIYVLSSLDREKKDHYILTALAKDNPGDVASNRRE-NSVQVVIQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGPNGELTYSLE--GPGVEAFHVDMDSGLVTTQRPL--QSYEKFSLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIREEIPLRSNVYEVYATDKDEGLNGAVRYSFLKTAGNRDWEFFIIDPISGLIQTAQRLDRESQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPKGSPQYQLLTVPEHSPRGTLVGNVTGAVDADEGPNAIVYYFIAAGNEEKNFHL-QPDGCLLVLRDLDREREAIFSFIVKASSNRSWTPPRGPSPTLDLVADLTLQEVRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALDADIGNNSLVFYSILAIHYFRALANDSEDVGQVFTMGSMDGILRTFDLFMAYSPGYFVVDIVARDLAG----HNDTAIIGIYILRDDQRVKIVINEIPDRVRGFEEEFIHLLSNITGAIVNTDNVQFHVDKKGRVNFAQTELLIHVVNRDTNRILDVDRVIQMIDENKEQLRNLFRNYNV--LDVQPAISVRLPDD 3061 HSP 2 Score: 235.343 bits (599), Expect = 1.803e-63 Identity = 213/686 (31.05%), Postives = 318/686 (46.36%), Query Frame = 3
Query: 3 RETRSFYEFTVQAADHGDVPNHQAFVAVKISLIDVNDNNPIFTS-VKYQKAIFEDTTSLQPFLQIWATDKDIGSNGQVEYSITGGDPNSNFYISPEGGQLRVRTSL-DVETKQKYNLTITATDHGTPPLSTQIHVEIQVKDVNDNFPIFVKQKYSFDIMENA-TVGLFVGGIVAKDKDITALLSTVYYDWNNTNTNRDFRIDEMTGRIKLATTLDYE-TQRMYSLVAIAYNKDIFEQRSMVTHVFVDFHIFDHNDNAPVFPP-YCCNVSVSEKFPVDGVIYTFYATDADGPTNNQVSYVLDPNSGDNEFFHLSTNGQLRLEK--PLDRETKDELVIEVQAIDNGDPAMSTTTDFRITVTDVNDVTPRFREIEIK-ALSEDVKEGTYIATFSADDEDLGASGVVSYAIISGNENGDLVLNSTSGVLETFKYLDYERTPEYKLKVQAKDGGGDTALSVIKEFVVPVINI---NDNIPLFPTNIKPQVEVMENAPIGTSVTT----IQANDADGD--QIYFFIVGGNSDDYFTIGHKTG--ELRTNKILDRELNSSFVLKIEASNRNTSTYNTGSRRRREIDHQVITEDFNITIGDENDNPPVFTKNLFIGGISDKAEYGTKVLKLIAIDADSPSETVLAYSLEDGSSTTGKFSIDVNTGWIK-SQSLFTESTQLVYNFEVMVKDNGGV 2000
RE Y V A+D G P + + ++++++D+NDN P+ S Y ++ E+ +Q+ ATD+DIG N + Y IT G+ + F + G++ R + D E + Y+L T D GTP LS HV + + D NDN P+F + Y + E T+ + I A D D TV Y N FRID G I A LDYE + Y+L+ A ++ + + V ++ D NDN P FP Y V+E P V +TF A D D N QV Y + EF G LR+ K LDRET + + A D G P +S+T I V D+ND P + + +SE+ +++A A D D G + +++ I +GN +N+T+G++ + LD ER PEYKL + KD + ++ +++ + +I + NDN PLF T Q EVMEN+P GT +T I A DAD D + + + G F I TG +R+ I+DRE S +L++ + N+ T ITI D+NDN P F+ + + G VL++ A D DS L Y +E G+ +F I + TG I+ + Q Y V+ D G V
Sbjct: 1487 REELDHYILQVVASDRGTPPRKKDHI-LQVTILDINDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMAFRMDRISGEIATRPAPPDRERQSFYHLVATVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTLNTSLITIQALDLD-EGPNGTVTYAIVAGNIVNTFRIDRHMGVITAAKELDYEISHGRYTLIVTATDQCPILSHRLTSTTTVLVNVNDINDNVPTFPRDYEGPFEVTEGQPGPRV-WTFLAHDRDSGPNGQVEYSIMDGDPLGEFVISPVEGVLRVRKDVELDRETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVLASDADSGCNARLTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEYKLTISVKDNPENPRIAR-RDYDLLLIFLSDENDNHPLF-TKSTYQAEVMENSPAGTPLTVLNGPILALDADQDIYAVVTYQLLGAQSGLFDINSSTGVVTVRSGVIIDREAFSPPILELLLLAEDIGLLNS-------------TAHLLITILDDNDNRPTFSPATLTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQ--DRFLIHLVTGVIRVGNATIDREEQESYRLTVVATDRGTV 2152 HSP 3 Score: 197.593 bits (501), Expect = 1.290e-51 Identity = 181/644 (28.11%), Postives = 282/644 (43.79%), Query Frame = 3
Query: 3 RETRSFYEFTVQAADHGDVP-NHQAFVAVKISLIDVNDNNPIFTSVKYQKAIFEDTTSLQPFLQIWATDKDIGSNGQVEYSITGGDPNSNFYISPEGGQLRVRTSLDVETKQKYNLTITATDHGTPPLSTQIHVEIQVKDVNDNFPIFVKQKYSFDIMENATVGLFVGGIVAKDKDITALLSTVYYDWNNTNTNRDFRIDEMTGRIKLATTLDYETQRMYSLVAIAY-NKDIFEQRSMVTHVFVDFHIFDHNDNAPVFPPYCCNVSVSEKFPVDGVIYTFYATDADGPTNNQVSY-VLDPNSGDNEFFHLSTNGQLRLEKPLDRETKDELVIEVQAIDNGDPAMSTTTDFRITVTDVNDVTPRFREIEIK--ALSEDVKEGTYIATFSADDEDLGASGVVSYAIISGNENGDLVLNSTSGVLETFKYLDYERTPEYKLKVQAKDGGGDTALSVIKEFVVPVININDNIPLFPTNIKPQVEVMENAPIGTSVTTIQANDADG-DQI-YFF--IVGGNSDDYFTIGHKTGELRTNKILDRELNSSFVLKIEASNRNTSTYNTGSRRRREIDHQVITEDFNITIGDENDNPPV--FTKNLFIGGISDKAEYGTKVLKLIAIDADSPSETVLAYSLEDGSSTTGKFSI 1901
E + V D G P + V ++L+D+NDN+P F ++ + + E + Q+ A D D G NG V Y + G P +F I+ G + T LD E +Y L + A+D GTP S+ + I V DVND P F Y+ + E+ V + D D+ L + + Y N + F + ++ LD ET Y L+ A N + ++ + VFV + D NDN P+F SV E P I ATDAD +V Y +L N G+N H+S +R +PLDRE V+ V+A ++ M ++ + V D+ND P F + + L E GT + A D D G G+V+Y I+SG E G ++ ++G++ T YLDYE Y + V A D ++ + +++ + +N + ++EN +GT + +QA D +QI Y F + F I TG + ++DRE + L + A + ++D V IT+ DENDN P FT + + I + G +V + A D D+ S + +SL G + G F I
Sbjct: 848 HEAELMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDV-GLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGLDRETTAAYMLILEAIDNGPVGKRHTGTATVFVT--VLDVNDNRPIFLQSSYEASVPEDIPEGHSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVLIVEAYNHDLGPMRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVVQATDRDSGDGGLVNYRILSGAE-GKFEIDESTGLIITVNYLDYETKTSYMMNVSATDQAPPFNQGFCSVYITLLNELDEAVQF--SNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFNAYTSTQAKALFKIDAITGVITVQGLVDREKGDFYTLTVVADDGGP-----------KVDSTV---KVYITVLDENDNSPRFDFTSDSAV-SIPEDCPVGQRVATVKAWDPDAGSNGQVVFSLASG-NIAGAFEI 1469 HSP 4 Score: 194.126 bits (492), Expect = 1.588e-50 Identity = 192/647 (29.68%), Postives = 289/647 (44.67%), Query Frame = 3
Query: 21 YEFTVQAADHGDVPNHQ--AFVAVKISLIDVNDNNPIFTSVKYQKAIFEDTTSLQPFLQIW---ATDKDIGSNGQVEYSITGGDPNSNFYISPEGGQLRVR--TSLDVETKQKYNLTITATDHGTPPLSTQIHVEIQVKDVNDNFPIFVKQKYSFDIMENATVGLFVGGIVAKDKDITALLSTVYYDWNNTNTNRDFRIDEMTGRIKLATTLDYETQRMYSLVAIAYNKDIFEQRSMVTHVFVDFHIF--DHNDNAPVFPPYCCNVSVSEKFPVDGVIYTF----YATDADGPTNNQVSY-VLDPNSGDNEFFHLSTNGQLRLEKPLDRETKDELVIEVQAIDNGDPAMSTTTDFRITVTDVNDVTPRFREIEIKA-LSEDVKEGTYIATFSADDEDLGASGVVSYAIISGNENGDLVLNSTSGVLETFKYLDYERTPEYKLKVQAKDGGGDTALSVIKEFVVPVININDNIPLFPTNIKPQVEVMENAPIGTSVTTIQANDAD-GDQIYFFIVG-----------GNSDDYFTIGHKTGELRTNKILDRELNSSFVLKIEASNRNTSTYNTGSRRRREIDHQVITEDFNITIGDENDNPPVFTK---NLFIGGISDKAEYGTKVLKLIAIDADSPSETVLAYSLED 1871
Y V A D + +H+ + V +++ D+NDN P F + + FE T QP ++W A D+D G NGQVEYSI GDP F ISP G LRVR LD ET YNLTI A D G PPLS+ + V I+V D+NDN P+ + + I EN+ V FV ++A D D + + + ++ N R F I+ TG + + LD E Y L KD E + + IF D NDN P+F V E P + A DAD V+Y +L SG + + +R +DRE ++E+ + +++T IT+ D ND P F + L E+ G + +A DED G +G + Y I +G ++ L+ T + +D E Y+L V A D G LS + + +IND+ P F I+ V V+E+A GT + I A D D ++ + IVG N +D F + TG + ++REL +++ + + + N R + V + + D NDN P F ++ I + A GT ++ + A+D D ++ Y+L D
Sbjct: 1707 YTLIVTATDQCPILSHRLTSTTTVLVNVNDINDNVPTFP--RDYEGPFE-VTEGQPGPRVWTFLAHDRDSGPNGQVEYSIMDGDPLGEFVISPVEGVLRVRKDVELDRETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSSFVAHVLASDAD-SGCNARLTFNITAGNRERAFFINATTGIVTVNRPLDRERIPEYKLTISV--KDNPENPRIARRDYDLLLIFLSDENDNHPLFTKSTYQAEVMENSPAGTPLTVLNGPILALDADQDIYAVVTYQLLGAQSGLFDINSSTGVVTVRSGVIIDREAFSPPILELLLLAEDIGLLNSTAHLLITILDDNDNRPTFSPATLTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVGNATIDREEQESYRLTVVATD-RGTVPLSGTAIVTILIDDINDSRPEFLNPIQ-TVSVLESAEPGTVIANITAIDHDLNPKLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSVMVKSPMNRELVATYEVTLSVID------NASDLPERSV--SVPNAKLTVNVLDVNDNTPQFKPFGITYYMERILEGATPGTTLIAVAAVDPDKGLNGLVTYTLLD 2337 HSP 5 Score: 192.971 bits (489), Expect = 3.799e-50 Identity = 215/702 (30.63%), Postives = 317/702 (45.16%), Query Frame = 3
Query: 3 RETRSFYEFTVQAADHGDVPNHQAFVA--VKISLIDVNDNNPIFTSVKYQKAIFEDTTSLQPFLQIWATDKDIGSNGQVEYSITGGDPNSNFYISPEGGQLRVRTSLDVETKQKYNLTITATDH-GTPPLSTQIHVEIQVKDVNDNFPIFVKQKYSFDIMENATVGLFVGGIVAKDKDITALLSTVYYDWNNTNTNRDFRIDEMTGRIKLATTLDYETQRMYS------LVAIAYNKDIFEQRSMVTHVFVDFHIFDHNDNAPVFPPYCCNVSVSEKFPVDGVIYTFY-ATDADGPT------------NNQVSYVLDPNSGDNEFFHLSTNGQLRLEKPLDRETKDELVIEVQAIDNGDPAMSTTTDFRITVTDVNDVTPRFRE-IEIKALSEDVKEGTYIATFSADDEDLGASGVVSYAIISGNENGDLVLNSTSGVLETFKYLDYERTPEYKLKVQAKDGGGDTALSVIKEFVVPVININDNIPLFPTNIKPQVEVMENAPIGTSVTTIQANDADG---DQIYFFIVGGNS-DDYFTIG--HKTGELRTNKILDREL--NSSFVLKIEASNRNTSTYNTGSRRRREIDHQVITEDFNITIGDENDNPPVFTKNLFIGGISDKAEYGTKVLKLIAIDADSPSE---TVLAYSLEDGSSTTGKFSIDVNTGWIKSQSLFTESTQLVYNFEVMVKDNGGVGN 2006
RET+S EFTV+ + V +HQ + V I + DVNDN P F + Y I E+T P + ATD D+G+ G V YS P+ F I G + V LD ET Q Y LT+ ATD T PLST ++ I + DV D PIF+ YS +I E++ G V I A D+D + Y + NTN F +D ++G + L LD E +YS + N D + VT F + + D NDNAP F +V+++E V + F D D NN +++ P S + + ++R+ PLD ET D ++ A + P +IT+ + ND P F + + +L E+V GT + T A D D G G VSY ++ L+ +G++ LDYE + L + A+DGGG+ ++ + V+++NDN+P F + + EN P T + ++A D D +QI + IV ++ YF I G + ++ LD E N L + A + N+ T I + DENDNPP F+K + + + G VL L A D D E + YSLE GS+ +F I+ +G I + SL T+ Y V D GGVG+
Sbjct: 95 RETKS--EFTVEFS----VSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQ--PPSQFFAIDSARGIVTVIRELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSPPGTTVRIITAIDQD-KGRPRGIGYTIVSGNTNSIFALDYISGVLTLNGLLDRENP-LYSHGFILTVKGTELNDDRTPSDATVTTTF-NILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQGK-----ADIRIRVAIPLDYETVDRYDFDLFA-NESVPDHVGYAKVKITLINENDNRPIFSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVSYFF--SDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGEETTGRVR---INVLDVNDNVPTFQKDAYVGA-LRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNS-------------TVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLE-GST---QFRINARSGEITTTSLLDRETKSEYILIVRAVD-GGVGH 755 HSP 6 Score: 190.274 bits (482), Expect = 2.536e-49 Identity = 196/715 (27.41%), Postives = 316/715 (44.20%), Query Frame = 3
Query: 3 RETRSFYEFTVQAADHGDVPNHQAFVAVKISLIDVNDNNPIFTSVKYQKAIFEDTTSL-QPFLQIWATDKDIGSNGQVEYSITGGDPNSNFYISPEGGQLRVRTSLDVETKQKYNLTITATDHGTPPLSTQIHVEIQVKDVNDNFPIFVKQKYSFDIMENATVGLFVGGIVAKDKDITALLSTVYYDWNNTNTNRDFRIDEMTGRIKLATTLDYETQRMYSLVAIAYNKDIFEQRSMVTHVFVDFHIFDHNDNAPVFPPYC-CNVSVSEKFPVDGVIYTFYATDADGPTNNQVSYVLDPNSGDNEFFHLSTN---GQLRLEKPLDRETKDELVIEVQAIDNGDPAMSTTTDFRITVTDVNDVTPRFREIEIK-----ALSEDVKEGTYIATFSADDEDLGASGVVSYAIISGNENGDLVLNSTSGVLETFKY-LDYERTPEYKLKVQAKDGGGDTALSVIKEFVVPVININDNIPLFPTNIKPQVEV-MENAP--IGTSVTTIQANDAD---GDQIYFFIVGGNSDDYFTIGHKTGELRTNKILDREL-NSSFVLKIEASNRNTSTYNTGSRRRREIDHQVI-TEDFNITIGDENDNPPVFTKNLFIGGISDKAEYGTKVLKLIAIDADSPSETVLAYSLEDGSSTTGKFSIDVNTGWIKSQS--LFTESTQLVYNFEVMVKDNGGVGNFSHDSTNVKITVVTDAQRVLITMRTN 2084
RE S + V+A +H D+ ++ V V + + D+ND P+FT +Y + +T + + + ATD+D G G V Y I G F I G + LD ETK Y + ++ATD P V I + + D F Y I+EN +G + + A D ++ + + +T F+ID +TG I + +D E Y+L +A D + V++ + D NDN+P F VS+ E PV + T A D D +N QV + L + F ++TN G++ + +PLDRE D +++V A D G P ++T+ D+ND P IE +++E+V GT + A D D+G + V+SY I GN++ ++ SG + T D ER Y L +D G T LS V +++ NDN P+F +P EV ++ P + TS+ TIQA D D + + IV GN + F I G + K LD E+ + + L + A+++ + H++ T + + D NDN P F ++ + + G +V +A D DS + YS+ DG G+F I G ++ + T YN + +D G S +++ + D VL+ + N
Sbjct: 1168 RERNSSHVLIVEAYNH-DLGPMRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVVQATDRDSGDGGLVNYRILSG-AEGKFEIDESTGLIITVNYLDYETKTSYMMNVSATDQAPPFNQGFCSVYITLLNELDEAVQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFNAYTSTQAKALFKIDAITGVITVQGLVDREKGDFYTLTVVA--DDGGPKVDSTVKVYIT--VLDENDNSPRFDFTSDSAVSIPEDCPVGQRVATVKAWDPDAGSNGQVVFSLASGNIAGAFEIVTTNDSIGEVFVARPLDREELDHYILQVVASDRGTPPRKKDHILQVTILDINDNPPV---IESPFGYNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITEGNKDMAFRMDRISGEIATRPAPPDRERQSFYHLVATVEDEGTPT-LSATTHVYVTIVDENDNAPMFQ---QPHYEVLLDEGPDTLNTSLITIQALDLDEGPNGTVTYAIVAGNIVNTFRIDRHMGVITAAKELDYEISHGRYTLIVTATDQCPI-----------LSHRLTSTTTVLVNVNDINDNVPTFPRDYEGPFEVTEGQPGPRVWTFLAHDRDSGPNGQVEYSIMDGDP-LGEFVISPVEGVLRVRKDVELDRETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMN 1857 HSP 7 Score: 181.8 bits (460), Expect = 1.359e-46 Identity = 202/699 (28.90%), Postives = 303/699 (43.35%), Query Frame = 3
Query: 6 ETRSFYEFTVQAADHGDVPNHQAFVAVKISLIDVNDNNPIFTSVKYQKAIFEDTTSLQPFLQIWATDKDIGSNGQVEYSITGGDPNSNFYISPEGGQLRVRTSLDVETKQKYNLTITATDHGTPPLSTQIHVEIQVKDVNDNFPIFVKQKYSFDIMENATVGLFVGGIVAKDKDITALLSTVYYDWNNTNTNRDFRID--EMTGRIKLATTLDYE--TQRMYSLVAIAYNKDIFEQRSMVTHVFVDFHIFDHNDNAPVFPPYCCNVSVSEKFPVDGVIYTFYATDADGPTNNQVSYVLDPNSGDNEFFHLSTNGQLRLEKPLDRETKDELVIEVQAIDNGDPAMSTT--TDFRITVTDVNDVTPRFREIEIKA-LSEDVKEGTYIATFSADDEDLGASGVVSYAIISGNENGDLVLNSTSG-VLETFKYLDYERTPEY------KLKVQAKDGGGDTALSVIKEFV-VPVININDNIPLFPTNIKPQVEVMENAPIGTSVTTIQANDAD----GDQIYFFIVGGNSDDYFTIGHKTGELRTNKILDRELNSSFVLKIEASNRNTSTYNTGSRRRREIDHQVITEDFNITIGDENDNPPVFTKNLFIGGISDKAEYGTKVLKLIAIDADSPSETVLAYSLEDGSSTTGKFSIDVNTGWIKSQSLFTESTQLVYNFEVMVKDNGGVGNFSHDSTNVKITVV 2045
ET Y+F + A + VP+H + VKI+LI+ NDN PIF+ Y +++E+ T L + ATD D G+ G+V Y + DP+ F + + G + + LD E Q++ LTI A D G T V I V DVNDN P F K Y + EN + + A D+D Y + + F I E G I ++ LDYE + + L +A + + + V V +FD NDN P F VSV E + ATD D ++ G +F + +G++ LDRETK E ++ V+A+D G T IT+ D+ND P +++ L E + + T A D DLG +G + Y+I N+ LNST+G + T LD E + K+ V D G + V V ++++NDN P F N+ EV+E P G S+ + A D D G Y VG D F I +G + T LDRE + + L++ AS+ T T ++ T I + D ND P F ++ +S+ +V+ L D D L+Y + G + GKFS+ +++ T Y + DNG VG + V +TV+
Sbjct: 422 ETVDRYDFDLFANE--SVPDHVGYAKVKITLINENDNRPIFSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVSYFFS-DDPD-RFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGGGE--ETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAG---NPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQFRINARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPPNKF--YSLNSTTGKIRTTHAMLDRENPDPHEAELMRKIVVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTF-QNLPFVAEVLEGIPAGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMD-FLINSSSGVVVTTTELDRERIAEYQLRVVASDAGTPTKSS-------------TSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREFRVVWLNCTDNDVGLNAELSYFIT-GGNVDGKFSVGYRDAVVRTVVGLDRETTAAYMLILEAIDNGPVGKRHTGTATVFVTVL 1093 HSP 8 Score: 179.874 bits (455), Expect = 4.829e-46 Identity = 197/667 (29.54%), Postives = 290/667 (43.48%), Query Frame = 3
Query: 6 ETRSFYEFTVQAADHGDVPNHQAFVAVKISLIDVNDNNPIFTSVKYQKAIFEDTTSLQPFLQIWATDKDIGSNGQVEYSITGGDPNSNFYISPEGGQLRVRTSLDVET---KQKYNLTITAT---DHGTPPLST-QIHVEIQVKDVNDNFPIFVKQKYSFDIMENATVGLFVGGIV-AKDKDITALLSTVYYDWNNTNTNRDFRIDEMTG------RIKLATTLDYETQRMYSLVAIAYNKDIFEQRSMVTHVF---VDFHIFDHNDNAPVFPPYCCNVSVSEKFPVDGVIYTFYATDADGPTNNQVSYVLDPNSGDNEFFHLSTN-GQLRLEKPLDRETKDELVIEVQAIDNGDPAMSTTTDFRITVTDVNDVTPRF-REIEIKALSEDVKEGTYIATFSADDEDLGASGVVSYAIISGNENG---DLVLNSTSGVLETFKYLDYERTPE--YKLKVQAKDGGGDTALSVIKEFVVPVININDNIPLFPTNIKPQ--VEVMENAPIGTSVTTIQANDAD-----GDQIYFFIVGGNSDDYFTIGHKTGELRTNKILDRELNSSFVLKIEASNRNTSTYNTGSRRRREIDHQVITEDFNITIGDENDNPPVFTKNLFIGGISDKAEYGTKVLKLIAIDADSPSETVLAYSLEDG------SSTTGKF 1895
ET Y+ TV A D + I + DV D +PIF ++ Y I+E + I A D+D G + Y+I G+ NS F + G L + LD E + LT+ T D TP +T I V D+NDN P F +YS I E A VG + + DKD L++++ + N + F I + RI++A LDYET Y D+F S+ HV V + + NDN P+F N+S+ E V + T ATD D T +VSY S D + F L + G + L LD E + + A D G TT RI V DVND P F ++ + AL E+ T + A DED + ++Y+I+S + G D+ L GV+ + LDYE+ L V A D G+ L+ + V + NDN P F KP V V+EN G +V + A D D G + + + G++ F I ++GE+ T +LDRE S ++L + A + G ++ I NIT+ D NDN P + + + + + V ++A+D D L YS++ +STTGK
Sbjct: 196 ETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSPPGTTVRIITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGVLTLNGLLDRENPLYSHGFILTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQGKADIRIRVAIPLDYETVDRYDF-------DLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVSYFF---SDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIARDGG--GEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMD-AGNPPLNSTVPVTIEVFDENDNPPTFS---KPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQ--FRINARSGEITTTSLLDRETKSEYILIVRAVDG-----GVGHNQKTGI------ATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPPNKFYSLNSTTGKI 833 HSP 9 Score: 165.236 bits (417), Expect = 2.596e-41 Identity = 195/675 (28.89%), Postives = 296/675 (43.85%), Query Frame = 3
Query: 66 HQAFVAVKISLIDVNDNN-PIFTSVKYQKAIF--EDTTSLQPFLQIWATDKDIGSNGQVEYSITGGDPNSNFYISPEGGQLRVRTSLDVETKQKYNLTITATDHGTPPLSTQIHVEIQVKDVNDNFPIFVKQKYSFDIMENATVGLFVGGIVAKDKDITALLSTVYYDWNNTNTNRDFRIDEMTGRIKLATTLDYETQRMYSLVAIAYNKDIFEQRSMVTHVFVDFHIFDHNDNAPVF--PPYCCNVSVSEKFPVDGVIYTFYATDADGPTNNQVSYVLDPNSGDNEFFHLSTNGQLRLEKPLDRET---KDELVIEVQAIDNGD---PAMST-TTDFRITVTDVNDVTPRFREIEIK-ALSEDVKEGTYIATFSA---DDEDLGASGVVSYAIISGNENGDLVLNSTSGV------LETFKYLDYERTPEYKLKVQAKDGGGD-TALSVIKEFVVPVININDNIPLFPTNIKPQVEVMENAPIGTSVTTIQANDAD----GDQIYFFIVGGNSDDYFTIGHKTGELRTNKILDRELNSSFVLKIEASNRNTSTYNTGSRRRREIDHQVITEDFNITIGDENDNPPVFTKNLFIGGISDKAEYGTKVLKLIAIDADSPSETVLAYSLEDGSSTTGKFSIDVNTGW---IKSQSLFTE--STQLVYNFEVMVKDNG 1994
H A++ V IS N P FT+ + + EDT Q+ A D D N + + ++G + + F + P+ G + +R LD ETK ++ + + +DH V IQV DVNDN P F Q YS I EN VG + + A D D+ A S +Y + ++ F ID G + + LDYET + Y L A ++D + R + T + I D D P+F PY N + E P + A D D + Y + + ++ F +G L L LDRE ++ V+ + D P+ +T TT F I V D+ND P F E A++E + G + F DE+LG + + ++ GN + +++ TS + LDYE Y + A + D + +K + +IN NDN P+F + + + EN +GTSV T+ A D D G+ YFF + D F++ TG + LD EL F L I A R+ T R R I + D NDN P F K+ ++G + + T++++L A D DSP + YS+ S+ F I + G+ S+ L E S L+Y VM D G
Sbjct: 10 HVAWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLAQDMD---NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLY---SFQPPSQFFAIDSARGIVTVIRELDYETTQAYQLTVNATDQD--KTRPLSTLANLAIIITDVQDMDPIFINLPYSTN--IYEHSPPGTTVRIITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGVLTLNGLLDRENPLYSHGFILTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLV-GNNSHHFIISPTSVQGKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVK---ITLINENDNRPIFSQPLY-NISLYENVTVGTSVLTVLATDNDAGTFGEVSYFF---SDDPDRFSLDKDTGLIMLIARLDYELIQRFTLTIIA--RDGGGEETTGRVR-------------INVLDVNDNVPTFQKDAYVGALRENEPSVTQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYEQISNGLIY-LTVMAMDAG 647 The following BLAST results are available for this feature:
BLAST of TCONS_00017189 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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