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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017360 ID=TCONS_00017360|Name=TCONS_00017360|organism=Clytia hemisphaerica|type=transcript|length=1754bp
GAGGTCTCGAACGACAATTAATGCCAAGCTTTGCAAGAAAATAAATGCCA
GACAAGTTATATAAAAAATCGCTTCGGTAAGCTTGAAAACTGGAAAATCT
TCCAAAACCTCAAAAACGGTGAATGCGTTTAGACAAAACAGAACAAAACa
tcggaaaaaagaaataataaaaaaaattacctccCCCTTgatttaaatat
ttccttttgagGTAATTTAAATAGAATTTTCATCCCAACTGTGGTAAGAA
AGATAAATAGAACATCCCTGTCCGTCGATTGTTAATCGTCATAATCAGCC
CATGTATGTCGATTGTTAGTCTTCATAACCAATTTAATACAACCCCAAAA
GTTAAAATCCGACCAGGAATAAGTTGGCAGATAAGGTTTCTTGTTGGTTT
AATTCCAACGTTTTATTGTAAAGGTAGAGAAAGTCCCATTTCCTGGCAAA
CTGTTTCGATACAAACTAAAAGCTCTGTCATATCCTTCGCATGAAGATCA
CCAATGTTTCCGATACGGAACGAGTCAGCTTCCGTAACCTTTCCGGGATA
AATGACCATATTCATGTCAGATAGACGGGTGTAGAATTTGACAAAATCGA
AATTAGGGTTTTGAGGAAAGAAAAAGGATGTGATGATATAACCGGTGTGA
TCGCTTGATAGAAATTCTTTGAAGCCCATTTTAGCCATCCCTTCTCGCAA
AATTCGTCGATTTTCTTGATACCTATTTGATCGGCCTTCAACACCTCCTT
CTTGTTCCCAACATTCAACAGCTTTCTTGAACCCCAAAATAGTATGCGTT
GGTGGTGTGAAGCGGAACTGTCCATTACTCTCCAATCCTAAATATTGCTC
ATAAACATCCAAACTCAAACTTCTCGAATTTCCTTTACATTCCATTAATT
TGTCTTTTCGTGCAATGACGACACCAAACCCAGGGACACCTTCCAAGCAC
TTATTAGCTGATGTAACAAGAAAATCAATATTCGAAACTTCTAAAGGAAC
GCCTCCGAAACTGCTCATTGCATCAACGAAAAAGACAGCATTAGGGGCGA
CTCTCTTTACCATCGAGGCAACTTCTTCAACAGGGTGGACAACTCCTGAA
GAGGTTTCACAGTGCACCATTGAGACGTGAGTGATGGACGGATCAGCTTT
CAAAGCCTCTTCTACCACTGATACGTCCACTTTCTTATCTTCGTTGAATT
TCAACAAAGTCTGAATAGAGAAACAAAATATTGTgatgacaaaaaaagaa
aaacaaagcaaCAATAACAGTCAACAATATTAATATTTGAGAGATGCAAA
AGTATTTCTTCCgtgattttttacaaattatagGTTACGTTTAGCCTGGT
TTCAATGCATTAGAGTATTGATATTTTATCAAGAGAGCTCTTCAAGCTga
aaaggtttttctttttctctttctttaaaACATGACTTTTACCGTTTCAA
TATCCAAATATTTAGCAATTTGTTCCATTCTCAGACCATAAGAACCAGAA
GTCGCAATCAACAACTTGCCACCTTGACGTGGAATCATTGTCTGGATGAC
ACCTTCTATAGCAAAAGTACCACTCCCTTGCATTGGAACCATAGTATAAG
TATCTGTTGAAATTCCAGCAACCTCTAAAACACGCTGTCTGATGTATTTG
ACTGTGTTCATAAATTCAACATCTCTAGAACCAAGATCTCTCAGCATTGC
TGTTTTTGTTTCATGATTGACACCAAGTGGACCAGGTGTAAACaactttt
tgtc Run BLAST on NCBI transcript from alignment at sc0000266:126986..129080+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017360 ID=TCONS_00017360|Name=TCONS_00017360|organism=Clytia hemisphaerica|type=transcript|length=2095bp|location=Sequence derived from alignment at sc0000266:126986..129080+ (Clytia hemisphaerica)
GAGGTCTCGAACGACAATTAATGCCAAGCTTTGCAAGAAAATAAATGCCA
GACAAGTTATATAAAAAATCGCTTCGGTAAGCTTGAAAACTGGAAAATCT
TCCAAAACCTCAAAAACGGTGAATGCGTTTAGACAAAACAGAACAAAACa
tcggaaaaaagaaataataaaaaaaattacctccCCCTTgatttaaatat
ttccttttgagGTAATTTAAATAGAATTTTCATCCCAACTGTGGTAAGAA
AGATAAATAGAACATCCCTGTCCGTCGATTGTTAATCGTCATAATCAGCC
CATGTATGTCGATTGTTAGTCTTCATAACCAATTTAATACAACCCCAAAA
GTTAAAATCCGACCAGGAATAAGTTGGCAGATAAGGTTTCTTGTTGGTTT
AATTCCAACGTTTTATTGTAAAGGTAGAGAAAGTCCCATTTCCTGGCAAA
CTGTTTCGATACAAACTAAAAGCTCTGTCATATCCTTCGCATGAAGATCA
CCAATGTTTCCGATACGGAACGAGTCAGCTTCCGTAACCTTTCCGGGATA
AATGACCATATTCATGTCAGATAGACGGGTGTAGAATTTGACAAAATCGA
AATTAGGGTTTTGAGGAAAGAAAAAGGATGTGATGATATAACCGGTGTGA
TCGCTTGATAGAAATTCTTTGAAGCCCATTTTAGCCATCCCTTCTCGCAA
AATTCGTCGATTTTCTTGATACCTGAAAACAGAGATGACTTTTTTGAGTG
GCATGGCATACGTTAGAGGTCAGGTTTCAAATTTCATAACGAATGGAGAG
TTTGAGTTTTCTTACAAATATACGAAAGTACAAGTTAGTTCACAGACATA
TTAATGGAATGGAACTTTTTTTGcagctttttaatttaattcaaTTATCG
GATCAAGTATTGAGAAATGTGTAGCTTCAATGACGTGATCTCATTATCAT
TCTTCAAGCCGTTTTAAGCATAATGAATAGCAGATTGATTTAGAGAAAGC
TGACATCCCTGACATTAGTAATAAAGTAAAATGTACAAGGCAGTATAAAG
CTTTATGACATACCTATTTGATCGGCCTTCAACACCTCCTTCTTGTTCCC
AACATTCAACAGCTTTCTTGAACCCCAAAATAGTATGCGTTGGTGGTGTG
AAGCGGAACTGTCCATTACTCTCCAATCCTAAATATTGCTCATAAACATC
CAAACTCAAACTTCTCGAATTTCCTTTACATTCCATTAATTTGTCTTTTC
GTGCAATGACGACACCAAACCCAGGGACACCTTCCAAGCACTTATTAGCT
GATGTAACAAGAAAATCAATATTCGAAACTTCTAAAGGAACGCCTCCGAA
ACTGCTCATTGCATCAACGAAAAAGACAGCATTAGGGGCGACTCTCTTTA
CCATCGAGGCAACTTCTTCAACAGGGTGGACAACTCCTGAAGAGGTTTCA
CAGTGCACCATTGAGACGTGAGTGATGGACGGATCAGCTTTCAAAGCCTC
TTCTACCACTGATACGTCCACTTTCTTATCTTCGTTGAATTTCAACAAAG
TCTGAATAGAGAAACAAAATATTGTgatgacaaaaaaagaaaaacaaagc
aaCAATAACAGTCAACAATATTAATATTTGAGAGATGCAAAAGTATTTCT
TCCgtgattttttacaaattatagGTTACGTTTAGCCTGGTTTCAATGCA
TTAGAGTATTGATATTTTATCAAGAGAGCTCTTCAAGCTgaaaaggtttt
tctttttctctttctttaaaACATGACTTTTACCGTTTCAATATCCAAAT
ATTTAGCAATTTGTTCCATTCTCAGACCATAAGAACCAGAAGTCGCAATC
AACAACTTGCCACCTTGACGTGGAATCATTGTCTGGATGACACCTTCTAT
AGCAAAAGTACCACTCCCTTGCATTGGAACCATAGTATAAGTATCTGTTG
AAATTCCAGCAACCTCTAAAACACGCTGTCTGATGTATTTGACTGTGTTC
ATAAATTCAACATCTCTAGAACCAAGATCTCTCAGCATTGCTGTTTTTGT
TTCATGATTGACACCAAGTGGACCAGGTGTAAACaactttttgtc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017360-exon-sc0000266-1491911889:126986..127703 | TCONS_00017360-exon-sc0000266-1491911889:126986..127703 | Clytia hemisphaerica | exon |
| TCONS_00017360-exon-sc0000266-1510915933:126986..127703 | TCONS_00017360-exon-sc0000266-1510915933:126986..127703 | Clytia hemisphaerica | exon |
| TCONS_00017360-exon-sc0000266-1575043694:126986..127703 | TCONS_00017360-exon-sc0000266-1575043694:126986..127703 | Clytia hemisphaerica | exon |
| TCONS_00017360-exon-sc0000266-1491911889:128045..129080 | TCONS_00017360-exon-sc0000266-1491911889:128045..129080 | Clytia hemisphaerica | exon |
| TCONS_00017360-exon-sc0000266-1510915933:128045..129080 | TCONS_00017360-exon-sc0000266-1510915933:128045..129080 | Clytia hemisphaerica | exon |
| TCONS_00017360-exon-sc0000266-1575043694:128045..129080 | TCONS_00017360-exon-sc0000266-1575043694:128045..129080 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000266 | supercontig | sc0000266:126986..129080 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003824 |
catalytic activity |
Blast
The following BLAST results are available for this feature:
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