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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017536 ID=TCONS_00017536|Name=TCONS_00017536|organism=Clytia hemisphaerica|type=transcript|length=1371bp
Ctcgaatagaccttatcggagtttttgatttttctaaaaaagcgatgcat
tgtgggattattttgagtgtattacaatagaattccctcgaggaattcct
aagagatttctattgtaacacactcgaaacaatcccacgatgcatcgctt
ttttagaaaaatcaaaaactccgataaggtctattgccaTTGTCCCAGAA
TAAATCGGAATTGTTTCGATTGATTTAATCCTAGTTTTAATGTCTAttct
attttgttgtttttcagaCATCAGAAACAAGCAAAACGGACGTTTCCGGC
CTTTCACAAGCGACCGGTGGTGGTGGAACAGCGGAACCCTCTCTAGACGG
TGTGCCGGTCGACGAAAGTTTGTTCCAGGACCTTGACCTTGACGATCTTG
ATATTGATGACGAGTGAAAGATTTTTTGTCCATCGGTAGATAAGGTCTTA
tttttactttcggtttttctataaataaattttattatttttgaaattaa
aattaacgTCCTTTTTTCAATGAGGGGTTGGAAAGGAAAAAGGAATAGAG
ACGAaaaaagttcgaattacagTTGCATATCGGTTAAAAAAATGGGTGTG
AGGGCGAGCAATATTTTGAATTAATGTTTATTATGGATTCACGATTTgaa
gagaaacttttttcaaaaaataaaatattgaaatttttaggCGTCCAGAA
AATGAAGAGGGAGTTGAGTTGTTATTGGGGAGTTATGAATAAACTCTTAC
CACAATAATTTCGTAAGATTACAGtttattttataaaactttTTGTAACT
CACGTCAACTNATTTTTAGGCGTCCAGAAAATGAAGAGGGAGTTGAGTTG
TACCAGATATTTGTTATTGGGGAGTTATGAATAAACTCTTACCACAATAA
TTTCGTAAGATTACAGtttattttataaaactttTTGTAACTCACGTCAA
CTGTCTTCGTACtatactgaaaatgaaaatacacaACCTTATATGACGAC
AAAAAATCGACTGAATTACTGCTCTACAATAAAAAGATAAACAACTAGAT
CGCGTCTTTTGACCCTTTCAGGTCGATTGGACCACCGTGTTGCCGGGTGA
CCTTAGTATTTCCATCGATGGTATTTCCAAGAGACTTAAAGNGAAAAATC
GACTGAATTACTGCTCTACAATAAAAAGATAAACAACTAGGTCGCGTCTT
TTGACCCTTTCAGGTCGATTGGACCACCGTGTTGCCGGGTGACCTTAGTA
TTTCCATCGATGGTATTTCCAAGAGACTTAAAGCCAAAAATGAAAGTTGA
GTAAatttaaaggcttggggacacgagaagttttttttgcgtttatgcaa
tgcaacatgctccatcccacc Run BLAST on NCBI transcript from alignment at sc0000269:59536..60906- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017536 ID=TCONS_00017536|Name=TCONS_00017536|organism=Clytia hemisphaerica|type=transcript|length=1371bp|location=Sequence derived from alignment at sc0000269:59536..60906- (Clytia hemisphaerica)
CTCGAATAGACCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCAT
TGTGGGATTATTTTGAGTGTATTACAATAGAATTCCCTCGAGGAATTCCT
AAGAGATTTCTATTGTAACACACTCGAAACAATCCCACGATGCATCGCTT
TTTTAGAAAAATCAAAAACTCCGATAAGGTCTATTGCCATTGTCCCAGAA
TAAATCGGAATTGTTTCGATTGATTTAATCCTAGTTTTAATGTCTATTCT
ATTTTGTTGTTTTTCAGACATCAGAAACAAGCAAAACGGACGTTTCCGGC
CTTTCACAAGCGACCGGTGGTGGTGGAACAGCGGAACCCTCTCTAGACGG
TGTGCCGGTCGACGAAAGTTTGTTCCAGGACCTTGACCTTGACGATCTTG
ATATTGATGACGAGTGAAAGATTTTTTGTCCATCGGTAGATAAGGTCTTA
TTTTTACTTTCGGTTTTTCTATAAATAAATTTTATTATTTTTGAAATTAA
AATTAACGTCCTTTTTTCAATGAGGGGTTGGAAAGGAAAAAGGAATAGAG
ACGAAAAAAGTTCGAATTACAGTTGCATATCGGTTAAAAAAATGGGTGTG
AGGGCGAGCAATATTTTGAATTAATGTTTATTATGGATTCACGATTTGAA
GAGAAACTTTTTTCAAAAAATAAAATATTGAAATTTTTAGGCGTCCAGAA
AATGAAGAGGGAGTTGAGTTGTTATTGGGGAGTTATGAATAAACTCTTAC
CACAATAATTTCGTAAGATTACAGTTTATTTTATAAAACTTTTTGTAACT
CACGTCAACTNATTTTTAGGCGTCCAGAAAATGAAGAGGGAGTTGAGTTG
TACCAGATATTTGTTATTGGGGAGTTATGAATAAACTCTTACCACAATAA
TTTCGTAAGATTACAGTTTATTTTATAAAACTTTTTGTAACTCACGTCAA
CTGTCTTCGTACTATACTGAAAATGAAAATACACAACCTTATATGACGAC
AAAAAATCGACTGAATTACTGCTCTACAATAAAAAGATAAACAACTAGAT
CGCGTCTTTTGACCCTTTCAGGTCGATTGGACCACCGTGTTGCCGGGTGA
CCTTAGTATTTCCATCGATGGTATTTCCAAGAGACTTAAAGNGAAAAATC
GACTGAATTACTGCTCTACAATAAAAAGATAAACAACTAGGTCGCGTCTT
TTGACCCTTTCAGGTCGATTGGACCACCGTGTTGCCGGGTGACCTTAGTA
TTTCCATCGATGGTATTTCCAAGAGACTTAAAGCCAAAAATGAAAGTTGA
GTAAATTTAAAGGCTTGGGGACACGAGAAGTTTTTTTTGCGTTTATGCAA
TGCAACATGCTCCATCCCACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017536-exon-sc0000269-1575043694:59536..60906 | TCONS_00017536-exon-sc0000269-1575043694:59536..60906 | Clytia hemisphaerica | exon |
| TCONS_00017536-exon-sc0000269-1510915933:59536..60906 | TCONS_00017536-exon-sc0000269-1510915933:59536..60906 | Clytia hemisphaerica | exon |
| TCONS_00017536-exon-sc0000269-1491911889:59536..60906 | TCONS_00017536-exon-sc0000269-1491911889:59536..60906 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000269 | supercontig | sc0000269:59536..60906 - |
Blast
The following BLAST results are available for this feature:
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