TCONS_00017545 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017545
Unique NameTCONS_00017545
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2078

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017545 ID=TCONS_00017545|Name=TCONS_00017545|organism=Clytia hemisphaerica|type=transcript|length=2078bp
aaaaagaatttttcagctcaaaaaacgcatatttatttataagacccact
attaataagcatacatcgatgttcttaaaattactgaatttttttatgag
atatgttttttttgctctcgaagtcttgaatatgaaagaatatatttcaa
gagcatgaaattttggtttctaaacgtgttttttttataagaaaaaaacg
actaattttaatagatcgtcactatttgtgttctgaatgattgtttaatg
gtcacgcttatgtagatatcaattatatgtgttaaatgcataaccaggta
ggtccataaaagtatcacttgttattttAGTGAACTGCTATTGTGAATCT
AATGCATATTCAACTACGGGTAGTTCATCCTATGTCTCCACAATTTTTCG
TTCGCCACCTGACTTTAAACCCGaTTGTTCGTCAAATGGTTCAAATGTTA
TCATTGGAAACGTTCACGCTGTAGTCCAATCACAGCCTGTATTAGTGTAT
AGTGGAAATACGGGGATGGAGAATTGTTCTGAAATATGTTACAATAAGTT
CTTAACAAGTGATCAATCAATAAATGCGGCGCTTGTTGATagaaacaatg
gaaattgtTTATGCAGCAAGAATATACTGGTTGTTGGCTCAGATGAAGCA
TCCTCCTACAGTGTTTGCATCTTTAAAAAACCAAAGGAGACAGGGTCGTA
TATTATAGATCCACCCGAGGTTGGAGATGCGTACGGTGGTGTTGGCTGGT
CAAAGATGTTGATAGGCACAATGGACAGTTGGGATGCGTGTTATAGGTTC
TGTCTTGCGGCAAGTCTATCGACCAACCCTTCTTACAATGGAGCATCGTA
TCACAATGGAAAATTGAGATGTTGGTGCGAAAGTAATGCCCTACTTATTG
ATGAACGTCCTGGGAAGGAGCTTTATAACACCACCATATTTAAATACGCG
CCAAGCTATTATGATCCGCCTACTGTGTTGGTCGGCGTTTCGTATGGTAT
GTCAGGAAATGATGAGGACGAAATCACAGCATCTTATGGAAACAATGTAT
GGACTTATAAAGATTGCCTCGATTATTGCCTTTGGAATGCTGTGTTAAAA
AGACAAATCTACAATGCTGTAACATGGGGCGCATCAAATAaaagatGTTG
GTGTGCAAACAGCGCTTACATAACTCACTACTCATCAGAATACAGAACTG
CCTTCTTCAGAGAACCACATCATGTCGATTCCATTACAGgcgATCATGTA
AGATCAGAACCGTACAAAGATTGTTTGAACTGGCTTTACTACGTTGAAGT
CAATGTACCCTCCGATCCTAACGTCGGTGAACAAAAAAATAGCGTATATT
CCGGCTATATCTGTTATGTTTTGTGTCGACATTATCAGCCTTTTCAGGCG
TCAAATTATATTGGTGCGATGTATAAAGATTCAATGGAGTGTTGGTGCTT
GAAAAGAAACGATTTAACGACTACCGCCTCAAATACGACCAAGATTTGTT
ATTGGTGATTTGGTAACCTTTTTCTGCAGTGCTTGTATGATGCTGGGGGG
GAGGTGCTCTAAATTTGTAGACTAGTGCAAGATTCTGtttgtcaaaaatt
tatttcgatGGTTTGAAAAGCACTCCCAAATAATATTGTTCTTATGGTAT
TCTAAAGTTTTTGTACAAGATCAGTATCTCATTATATTCACGGTACCCCT
GtctattttcattcaatatcatTCAATATTTATTATTTCGATCCCCCGGC
AAACTTAACTGCTTGTATCCACTGACGGATTCTTGCTTCTTATAGATACT
ACTGGTGAAAGAGGGGGTCGTTTCTTCGTTCGTTGAAACTTGTACAATTC
CAGTTCTCTCTTCTCCCTTATTAGGCTGGTTACCTAATGGGTGCTTCATG
AATTGATATTTTATATCTATATATCTTTTTGTTATGCATTGTTTTTACCT
TTTATTGTTCCTCAATAAAAACgctaaaatattcatttttgaaattgagc
GAAAAAAGTTCACAATTTATAATCTCAAACACAAAATAAGaattgttaaa
aaatattcaaaatttcccaaaatttgGC
Run BLAST on NCBI

protein sequence of TCONS_00017545-protein

>TCONS_00017545-protein ID=TCONS_00017545-protein|Name=TCONS_00017545-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
MENCSEICYNKFLTSDQSINAALVDRNNGNCLCSKNILVVGSDEASSYSV
CIFKKPKETGSYIIDPPEVGDAYGGVGWSKMLIGTMDSWDACYRFCLAAS
LSTNPSYNGASYHNGKLRCWCESNALLIDERPGKELYNTTIFKYAPSYYD
PPTVLVGVSYGMSGNDEDEITASYGNNVWTYKDCLDYCLWNAVLKRQIYN
AVTWGASNKRCWCANSAYITHYSSEYRTAFFREPHHVDSITGDHVRSEPY
KDCLNWLYYVEVNVPSDPNVGEQKNSVYSGYICYVLCRHYQPFQASNYIG
AMYKDSMECWCLKRNDLTTTASNTTKICYW
Run BLAST on NCBI

transcript from alignment at sc0000269:133309..140801-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017545 ID=TCONS_00017545|Name=TCONS_00017545|organism=Clytia hemisphaerica|type=transcript|length=7493bp|location=Sequence derived from alignment at sc0000269:133309..140801- (Clytia hemisphaerica)
AAAAAGAATTTTTCAGCTCAAAAAACGCATATTTATTTATAAGACCCACT
ATTAATAAGCATACATCGATGTTCTTAAAATTACTGAATTTTTTTATGAG
ATATGTTTTTTTTGCTCTCGAAGTCTTGAATATGAAAGAATATATTTCAA
GAGCATGAAATTTTGGTTTCTAAACGTGTTTTTTTTATAAGAAAAAAACG
ACTAATTTTAATAGATCGTCACTATTTGTGTTCTGAATGATTGTTTAATG
GTCACGCTTATGTAGATATCAATTATATGTGTTAAATGCATAACCAGGTA
GGTCCATAAAAGTATCACTTGTTATTTTAGTGAACTGCTATTGTGAATCT
AATGCATATTCAACTACGGGTAGTTCATCCTATGTCTCCACAATTTTTCG
TTCGCCACCTGACTTTAAACCCGGTAAGAATATCAGGATTGGATTTCTTC
TGTTTTACTTTGCTTGAGAAATAAGCCCCTTTCTTTCGAAACGAAATCAG
ATTCATATTAGTTGATCGGTAAGACCAATAATAATCTACTAATAATTCCA
AATGTTTATCAGATAGTTGCAGAGTTTTTGTCTCAAAGAAATTATCTGTA
GTCTCGAATATAACCTCCAAATACTATGGCCTACCATCTTTTCAAAATTG
AGATATGAAAATTTCAAATTTCTAAAAATGATGGCTCTTACGTTATAAAT
TCAGTTTTTGAAATTATTTAAAAGTTATTCTTTTTACCATGAAAAGCATC
TAAAAGTAGGAGTGGGTTATATAGGGTCATTTTCATTTTTTTCGACAAAT
CATGTCAAACTAAATTTTCTTTAGCTCCGTATGCAGCCGTATGGCATATC
TATAAGGCAGGATCAAAAAGAATATTTGAGATATTTTAAATATAAAAAAT
GTGGGAGCCCCTTTTCTGGCCCCCTATTAGACTCATATAAAGTATGACAA
AAAAATTACCAATTTGACCTGGAAACCTTAAAAATCATTCAATTTTGCTG
CAATTTGGTACAAGTCCTCCTTGAATAACAATAATAACATTTTGTCAGTA
TTATTTAAAAATTTTCATTATCGGACGTTTTAGGGCGTGGCCAAACCCCA
AAAAGGGCAAAAAGGATTGGGTAGCTCTAGAAAACTTTCGAATGATATTT
TTGCCCTAAAGTTTAACATACCTACCCTCAGTTATCTATCTTGACGAATC
CTGAGAATATTTCCCAAAGTAAGTTCGTTATTTCGTAAATAATTGTTTCG
ATGTCCGCAAAAAAAGGGGAAATATAGACGGGCTAGGGCTCATTCATAAA
TCGTGTAATTCAATTGAATTTCCCTCTAGAATAATTAGTATTCTTGATTC
AAGAACAGTTTTGAAGCCTTTCAGAGTCAAAATTCATGTAAAAGTTTCAA
TTTTCCACTTTCAGATCCCTTTTTACGTCTTCTGAACTTCACTGAGGTAG
TGTTAAATTAAGTGTTTTTTTCACATAGCAAATTTTCGGCAGTTCTACGA
GAATTTACATTATTTCAGATATAAAAAGAAGTGCTTACAATTCACAAACA
CAAATTTTGATGGATTTTCTGTTGTTCAAGATCATAGAAATAAAAGGTTG
TCAAGTTTTCATATATTTAGGACGAATCCTAGGTAGGAAAAATAAAAATT
TTAAGATTTCACAATTTACACTGACAATTCTTCACCTGAAGAGGTAATGT
GCCAAATTTAAGCAGGAAAGAATGTTTTCTCGCCTTTATAGTCAAGCCTT
CCTCTTTTTTGCCTGCGTAAAGCCTTTGGGCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTAAAGCCTTT
GGGCTACGCCCAAAATGTCCAAAATTATATTTCTCGAATAAATGTTTTGA
TATACTTTATTTCTGTCCCTGAGAAGTGAATGTGCCAAATTTGACTGTGT
GTCTCATTTCCAACATAATTTGGGTAGTTGGGTAGATGGAAAAAGATTAA
TTTGAGGGCACAAACCTTAGTCTACAAAAAGGCTTCCCACATTTTTTTTC
TTCATTTTTGTTCAAAAATTCTATTTGATCCTGTCTACACTTATAATTTA
GACCTCAAAAAAATTTAGTTTGACATTTTTTGAAAAATCACCCTATAGCC
CACTCCTACTAAAAGTCAAAAATCGTAATATTTTTCGTAATCATTTGTTT
AAAATTATTGTTTTGTTGTTTTAGATTGTTCGTCAAATGGTTCAAATGTT
ATCATTGGAAACGTTCACGCTGTAGTCCAATCACAGCCTGTATTAGTGTA
TAGTGGAAATACGGGGATGGAGAATTGTTCTGAAATATGTTACAATAAGT
TCTTAACAAGTGATCAATCAATAAATGCGGCGCTTGTTGATAGAAACAAT
GGAAATTGTTTATGCAGCAAGAATATACTGGTTGTTGGCTCAGATGAAGC
ATCCTCCTACAGTGTTTGCATCTTTAAAAAACCAAAGGAGACAGGGTCGT
ATATTATAGGTAAGTTTATAGCTTATACTTTAACCAACTGGAGTTCTGTA
GAAAAAGTTCTTATGATTTTCATCTTACCCTCGCTATTTCATAAGGTCCA
CCCCCCAGTAATTTGGGGGTACCTAAAAAAAAAGGTTTAAAAAAGCCAGT
TACCTGGAAGTATTCTTAAATTTAGGGGGTACCTGATATGTTTGGGGACA
TCTGCATTTTCATTAGTTCAGGTAGGGGCTGTTTTTGTATAGTATTTTCC
ATAACTAACCAAATTTTCAAATTTTGAATCGAACCATTTCATTCAGAAGA
CTTTATAAAAAGGGGGTAAATCAAAGTTGGGGGGCTACTTTAAAATTCTA
ATAATTTTGGGGTACCTATAGACCCTATGTATTTTTACTGACCAAACTTA
AAGCACATTTAGTAAGGGACCATATTCCTGTGTACCCGTGATAACGATTT
TTGGAATAATTTTTTTCTCGCTTTTTACGAAACAAGAATGTATTTGAGGG
CAATAGATGAGTTTTTTGAGGCAGGGTACATGAATAACGCCCTATAACAA
TTTTTATGACCAAAAAACTTTTTTCATGCAAAACTATAAGAGTTGGTTAA
AAATCAACGATTTTCAAAAACCAGATTCAAAAGATATGATCAATACCAGC
GGATAGAACGAAATTCTGAGCAAAAAAACTTACTCTAACAAATATACCCT
GCATTTATCTCGGCTTCCCCTGAGTTCTCTTTCCCCTGTTTTTAAATTAA
TCAAATTTTCCGCCACTTTGCTGATCGAACTCCACCATCTACACTGTATA
CCAATATATTCACCTTTCTGCTTTTATTTTCTTGAAATTATTCAGATCCA
CCCGAGGTTGGAGATGCGTACGGTGGTGTTGGCTGGTCAAAGATGTTGAT
AGGCACAATGGACAGTTGGGATGCGTGTTATAGGTTCTGTCTTGCGGCAA
GTCTATCGACCAACCCTTCTTACAATGGAGCATCGTATCACAATGGAAAA
TGTAAGTTTTATTGTGGTGTAAACCCCCTTGCAGATGGTCGTAAAATAAA
CCCCACGGGGGACTCCTGTTTTGAAAAAAAAAATTCCCTAAAACTTTGAC
CCATTTTCACCGAAATTTCTACTTTTTTCCAAAACTTTTCGAAAATTGCA
ATTTTTGCGTTTTTTGCGACTCTGCAGTGATTTCTGTGCTTAGATGCAAC
CCCGGGTGTAAATGTTTACACACTAACTATTTCAGATTTTAATGGTATCA
TTGACATGGCATACGATGAAATAATATCATTAACTGAAACAGATGTTCTG
TCCCTTTCAGTCAAAAATTGCCCCTTAAGCCAGTCTCCACAAAGAGTATA
ATACTTTCCTCTGCGTTTTTCCCACGTCTGTCAACTGTAATAATATTTTA
TTTTTCTGTATCATTTCAGTGAGATGTTGGTGCGAAAGTAATGCCCTACT
TATTGATGAACGTCCTGGGAAGGAGCTTTATAACACCACCATATTTAAAT
ACGCGCCAAGCTATTATGGTAAATTTCATTTAAGGGCTGAAGCTTGAATA
GAATCAAAGCAAAACAAATAAAAAACTATTTTGCAATGATTTTGATATAA
AAATCAAAAAAACCCAGGAAGGAGTGAGTAAAGTGATCAGAAATCGAACA
AATTCATTTGAAACTTTTCTTGTTCACAAAGAAAGAAATGACAAAAATTA
CTTCTCCAAGACCAGGGCGTTCATTATTAAACATTTTTTTAACCATAGAT
CCGCCTACTGTGTTGGTCGGCGTTTCGTATGGTATGTCAGGAAATGATGA
GGACGAAATCACAGCATCTTATGGAAACAATGTATGGACTTATAAAGATT
GCCTCGATTATTGCCTTTGGAATGCTGTGTTAAAAAGACAAATCTACAAT
GCTGTAACATGGGGCGCATCAAATAGTATGTCCTTATTCATTTTGAATCC
TTCCTCTTAATTTTTCACGGGAGATTAGATTTTTTCACTGAGACCATGCT
CAGACGTTACGGTTTCGTATCGCTCCTGTTTGGTATTTGTTATGGATAAG
AAGTGTTCACACTGATTTCGGAACGTTTTGGAGCAACGAAACGTAGCAGT
TCCATTTCGATAAAAATAGTGGAGCGAAACTTTTTCGATCTATTTTGCTT
TTTAACGTCTTATTTTTTGACATTTTGAATTTTGACGTTCACACAGTGTT
TATGGACCGTTTCGTTTGGGAGCGATAAAAAACCGCAAACGTCTGAACAT
CACCTTTAAGAGTTTTTTTGGACTAGTTACAAAATTACATAAGGTTTGAA
TTTTTATTTTAGAAAGATGTTGGTGTGCAAACAGCGCTTACATAACTCAC
TACTCATCAGAATACAGAACTGCCTTCTTCAGAGAACCACATCATGTCGA
TTCCATTACAGGTATTTGACTACGAAATGTTCGTACGAACTGGTTGGAAA
AATTCTTTTTTAATTACGATTACTGTCTCGTACGCGTTATTTTATAAGCG
ACCCAAGTTATTAATGTAGGTACTTCCTATGTACATCTTTATGCTAACTT
TATATCATTTATCGTCGTCTGTATGTAGACACTGACACATTTTTTTATAA
ACACAAAGGCTCGAGCCCTGAAATTAGCCAATTTTTTAACTATCTCTTAA
AGTAAAAGCTTTTTAGATAATCTAAGCATGTCAGAACGATAGCCCTTGAC
CCAATAAGCATAAATATGGTATAATATCAGGGTTGATCAACGCAATTTTT
TCAAAAAATGAGCTAGAATGCTAAGCAACCCCAGCCTTGACCCGAAAATC
GGAATTGCTTATAAAAAGAATATGTATGAAAAAAATCAAAAAAGATGTCC
ACAATCTTCTCATGTTGCTTGCTTAGAATTTTAAGTATTTCAGCCTCGGC
GAATTTCGAAAGGAATATGCTCAAAAAATATTTTGAAAATACCTCCTCCT
CATTATTAAACTAAAATTGCCTTTTGCAATTTATGATATGCACCACTGCA
ATGTCTTCTGACATTACATCACGGACCCAATAGCTGATTGGTTGTAAGTG
ACGTAAAATCAGTCAATACGTCACTTTCAACCAATAGCTGTTAGGTACAT
AGAAGACATTGCAATGGTGCATATAATGAATACATTTGATGTCAAAGAAC
ATTTAAAGAATTACTTATTTACAAGAAATTTTGGTGTGTNAGCTGTTAGG
TGCATAGAAGACATTGCAATGGTGCATATAATGAATACATTTGATGTCAA
AGAACATTTAAAGAATTACTTATTTACAAGAAATTTTGGTGTGTTTTTTT
TTCAGGCGATCATGTAAGATCAGAACCGTACAAAGGTAAGCTCGTTGTTT
CGCGTCGTGTTGCAACCTCTCGCCTTCATTCTACAAAAAAAAAATAGTGA
TTCTGCTTTATGGAAAAGAAATGTCTCAAAGAAATAGATCACAAAAACTG
TTTGACATATGGTGACTGGGCTTTAGTTGAGTAGTTAGTTTTCCTGGGGT
AATTGTCTGGGGGATAGTTTGGCAGTTTTGAGCTTCTTTGGAGCTCCATA
CCGCTTATCAAGGTTCGTTTGATCGGTGGCAACTAAAAATTAGCGCACAA
TGAAAGCGAATGGGCTTACTATACACAATGTTCAACATACTTGAGTCCGT
TCAATGTAGAGATTCTTCATCTTTTATCAAGTTACACGTTTTTTTTAAGA
AACACACTTTTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAAATCT
AAGAAACATGCTGAGAATGAGAATGAGAAAATAACATTTTTTAATTCGGC
TTTTTTAAGAACCTTCCAATCCAGCTTTCCATGAGGCTGATTATGTCAAA
AAGTTTAGAAACATGTAAGTCACATTTAAGGCTCAAAAGGCCGATTTCTT
AAGAAACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAACCTGCA
CGTAACTTCTGCCATTATGGAAGCAAATGTTCAATATGTGTGAGGGAGCG
CCTCTACAAATTCGAAAGTTTGCTTCCACAATGGCGAAAATTACGCAAGT
TAATATAACATGAAAAACCTCTATACCTTTAATAAGTAGTCATAGATGAA
TTAGAATTAATTTTTTTATGAATTTTGTTTATAGATTGTTTGAACTGGCT
TTACTACGTTGAAGTCAATGTACCCTCCGATCCTAACGTCGGTGAACAAA
AAAATAGCGTATATTCCGGCTATATCTGTTATGTTTTGTGTCGACATTAT
CAGCCTTTTCAGGCGTCAAATTATATTGGTGCGATGTATAAAGATTCAAT
GGAGTGTTGGTGCTTGAAAAGAAACGATTTAACGACTACCGCCTCAAATA
CGACCAAGATTTGTTATTGGTGATTTGGTAACCTTTTTCTGCAGTGCTTG
TATGATGCTGGGGGGGAGGTGCTCTAAATTTGTAGACTAGTGCAAGATTC
TGTTTGTCAAAAATTTATTTCGATGGTTTGAAAAGCACTCCCAAATAATA
TTGTTCTTATGGTATTCTAAAGTTTTTGTACAAGATCAGTATCTCATTAT
ATTCACGGTACCCCTGTCTATTTTCATTCAATATCATTCAATATTTATTA
TTTCGATCCCCCGGCAAACTTAACTGCTTGTATCCACTGACGGATTCTTG
CTTCTTATAGATACTACTGGTGAAAGAGGGGGTCGTTTCTTCGTTCGTTG
AAACTTGTACAATTCCAGTTCTCTCTTCTCCCTTATTAGGCTGGTTACCT
AATGGGTGCTTCATGAATTGATATTTTATATCTATATATCTTTTTGTTAT
GCATTGTTTTTACCTTTTATTGTTCCTCAATAAAAACGCTAAAATATTCA
TTTTTGAAATTGAGCGAAAAAAGTTCACAATTTATAATCTCAAACACAAA
ATAAGAATTGTTAAAAAATATTCAAAATTTCCCAAAATTTGGC

Coding sequence (CDS) from alignment at sc0000269:133309..140801-

>TCONS_00017545 ID=TCONS_00017545|Name=TCONS_00017545|organism=Clytia hemisphaerica|type=CDS|length=6951bp|location=Sequence derived from alignment at sc0000269:133309..140801- (Clytia hemisphaerica)
ATTGTTTGAACTGGCTTTACTACGTTGAAGTCAATGTACCCTCCGATCCT
AACGTCGGTGAACAAAAAAATAGCGTATATTCCGGCTATATCTGTTATGT
TTTGTGTCGACATTATCAGCCTTTTCAGGCGTCAAATTATATTGGTGCGA
TGTATAAAGATTCAATGGAGTGTTGGTGCTTGAAAAGAAACGATTTAACG
ACTACCGCCTCAAATACGACCAAGATTTGTTATTGGTGAGCGATCATGTA
AGATCAGAACCGTACAAAGAAAGATGTTGGTGTGCAAACAGCGCTTACAT
AACTCACTACTCATCAGAATACAGAACTGCCTTCTTCAGAGAACCACATC
ATGTCGATTCCATTACAGATCCGCCTACTGTGTTGGTCGGCGTTTCGTAT
GGTATGTCAGGAAATGATGAGGACGAAATCACAGCATCTTATGGAAACAA
TGTATGGACTTATAAAGATTGCCTCGATTATTGCCTTTGGAATGCTGTGT
TAAAAAGACAAATCTACAATGCTGTAACATGGGGCGCATCAAATATGAGA
TGTTGGTGCGAAAGTAATGCCCTACTTATTGATGAACGTCCTGGGAAGGA
GCTTTATAACACCACCATATTTAAATACGCGCCAAGCTATTATGATCCAC
CCGAGGTTGGAGATGCGTACGGTGGTGTTGGCTGGTCAAAGATGTTGATA
GGCACAATGGACAGTTGGGATGCGTGTTATAGGTTCTGTCTTGCGGCAAG
TCTATCGACCAACCCTTCTTACAATGGAGCATCGTATCACAATGGAAAAT
ATGGAGAATTGTTCTGAAATATGTTACAATAAGTTCTTAACAAGTGATCA
ATCAATAAATGCGGCGCTTGTTGATAGAAACAATGGAAATTGTTTATGCA
GCAAGAATATACTGGTTGTTGGCTCAGATGAAGCATCCTCCTACAGTGTT
TGCATCTTTAAAAAACCAAAGGAGACAGGGTCGTATATTATAGATTGTTT
GAACTGGCTTTACTACGTTGAAGTCAATGTACCCTCCGATCCTAACGTCG
GTGAACAAAAAAATAGCGTATATTCCGGCTATATCTGTTATGTTTTGTGT
CGACATTATCAGCCTTTTCAGGCGTCAAATTATATTGGTGCGATGTATAA
AGATTCAATGGAGTGTTGGTGCTTGAAAAGAAACGATTTAACGACTACCG
CCTCAAATACGACCAAGATTTGTTATTGGTGAGCGATCATGTAAGATCAG
AACCGTACAAAGAAAGATGTTGGTGTGCAAACAGCGCTTACATAACTCAC
TACTCATCAGAATACAGAACTGCCTTCTTCAGAGAACCACATCATGTCGA
TTCCATTACAGATCCGCCTACTGTGTTGGTCGGCGTTTCGTATGGTATGT
CAGGAAATGATGAGGACGAAATCACAGCATCTTATGGAAACAATGTATGG
ACTTATAAAGATTGCCTCGATTATTGCCTTTGGAATGCTGTGTTAAAAAG
ACAAATCTACAATGCTGTAACATGGGGCGCATCAAATATGAGATGTTGGT
GCGAAAGTAATGCCCTACTTATTGATGAACGTCCTGGGAAGGAGCTTTAT
AACACCACCATATTTAAATACGCGCCAAGCTATTATGATCCACCCGAGGT
TGGAGATGCGTACGGTGGTGTTGGCTGGTCAAAGATGTTGATAGGCACAA
TGGACAGTTGGGATGCGTGTTATAGGTTCTGTCTTGCGGCAAGTCTATCG
ACCAACCCTTCTTACAATGGAGCATCGTATCACAATGGAAAATATGGAGA
ATTGTTCTGAAATATGTTACAATAAGTTCTTAACAAGTGATCAATCAATA
AATGCGGCGCTTGTTGATAGAAACAATGGAAATTGTTTATGCAGCAAGAA
TATACTGGTTGTTGGCTCAGATGAAGCATCCTCCTACAGTGTTTGCATCT
TTAAAAAACCAAAGGAGACAGGGTCGTATATTATAGATTGTTTGAACTGG
CTTTACTACGTTGAAGTCAATGTACCCTCCGATCCTAACGTCGGTGAACA
AAAAAATAGCGTATATTCCGGCTATATCTGTTATGTTTTGTGTCGACATT
ATCAGCCTTTTCAGGCGTCAAATTATATTGGTGCGATGTATAAAGATTCA
ATGGAGTGTTGGTGCTTGAAAAGAAACGATTTAACGACTACCGCCTCAAA
TACGACCAAGATTTGTTATTGGTGAGCGATCATGTAAGATCAGAACCGTA
CAAAGAAAGATGTTGGTGTGCAAACAGCGCTTACATAACTCACTACTCAT
CAGAATACAGAACTGCCTTCTTCAGAGAACCACATCATGTCGATTCCATT
ACAGATCCGCCTACTGTGTTGGTCGGCGTTTCGTATGGTATGTCAGGAAA
TGATGAGGACGAAATCACAGCATCTTATGGAAACAATGTATGGACTTATA
AAGATTGCCTCGATTATTGCCTTTGGAATGCTGTGTTAAAAAGACAAATC
TACAATGCTGTAACATGGGGCGCATCAAATATGAGATGTTGGTGCGAAAG
TAATGCCCTACTTATTGATGAACGTCCTGGGAAGGAGCTTTATAACACCA
CCATATTTAAATACGCGCCAAGCTATTATGATCCACCCGAGGTTGGAGAT
GCGTACGGTGGTGTTGGCTGGTCAAAGATGTTGATAGGCACAATGGACAG
TTGGGATGCGTGTTATAGGTTCTGTCTTGCGGCAAGTCTATCGACCAACC
CTTCTTACAATGGAGCATCGTATCACAATGGAAAATATGGAGAATTGTTC
TGAAATATGTTACAATAAGTTCTTAACAAGTGATCAATCAATAAATGCGG
CGCTTGTTGATAGAAACAATGGAAATTGTTTATGCAGCAAGAATATACTG
GTTGTTGGCTCAGATGAAGCATCCTCCTACAGTGTTTGCATCTTTAAAAA
ACCAAAGGAGACAGGGTCGTATATTATAGATTGTTTGAACTGGCTTTACT
ACGTTGAAGTCAATGTACCCTCCGATCCTAACGTCGGTGAACAAAAAAAT
AGCGTATATTCCGGCTATATCTGTTATGTTTTGTGTCGACATTATCAGCC
TTTTCAGGCGTCAAATTATATTGGTGCGATGTATAAAGATTCAATGGAGT
GTTGGTGCTTGAAAAGAAACGATTTAACGACTACCGCCTCAAATACGACC
AAGATTTGTTATTGGTGAGCGATCATGTAAGATCAGAACCGTACAAAGAA
AGATGTTGGTGTGCAAACAGCGCTTACATAACTCACTACTCATCAGAATA
CAGAACTGCCTTCTTCAGAGAACCACATCATGTCGATTCCATTACAGATC
CGCCTACTGTGTTGGTCGGCGTTTCGTATGGTATGTCAGGAAATGATGAG
GACGAAATCACAGCATCTTATGGAAACAATGTATGGACTTATAAAGATTG
CCTCGATTATTGCCTTTGGAATGCTGTGTTAAAAAGACAAATCTACAATG
CTGTAACATGGGGCGCATCAAATATGAGATGTTGGTGCGAAAGTAATGCC
CTACTTATTGATGAACGTCCTGGGAAGGAGCTTTATAACACCACCATATT
TAAATACGCGCCAAGCTATTATGATCCACCCGAGGTTGGAGATGCGTACG
GTGGTGTTGGCTGGTCAAAGATGTTGATAGGCACAATGGACAGTTGGGAT
GCGTGTTATAGGTTCTGTCTTGCGGCAAGTCTATCGACCAACCCTTCTTA
CAATGGAGCATCGTATCACAATGGAAAATATGGAGAATTGTTCTGAAATA
TGTTACAATAAGTTCTTAACAAGTGATCAATCAATAAATGCGGCGCTTGT
TGATAGAAACAATGGAAATTGTTTATGCAGCAAGAATATACTGGTTGTTG
GCTCAGATGAAGCATCCTCCTACAGTGTTTGCATCTTTAAAAAACCAAAG
GAGACAGGGTCGTATATTATAGATTGTTTGAACTGGCTTTACTACGTTGA
AGTCAATGTACCCTCCGATCCTAACGTCGGTGAACAAAAAAATAGCGTAT
ATTCCGGCTATATCTGTTATGTTTTGTGTCGACATTATCAGCCTTTTCAG
GCGTCAAATTATATTGGTGCGATGTATAAAGATTCAATGGAGTGTTGGTG
CTTGAAAAGAAACGATTTAACGACTACCGCCTCAAATACGACCAAGATTT
GTTATTGGTGAGCGATCATGTAAGATCAGAACCGTACAAAGAAAGATGTT
GGTGTGCAAACAGCGCTTACATAACTCACTACTCATCAGAATACAGAACT
GCCTTCTTCAGAGAACCACATCATGTCGATTCCATTACAGATCCGCCTAC
TGTGTTGGTCGGCGTTTCGTATGGTATGTCAGGAAATGATGAGGACGAAA
TCACAGCATCTTATGGAAACAATGTATGGACTTATAAAGATTGCCTCGAT
TATTGCCTTTGGAATGCTGTGTTAAAAAGACAAATCTACAATGCTGTAAC
ATGGGGCGCATCAAATATGAGATGTTGGTGCGAAAGTAATGCCCTACTTA
TTGATGAACGTCCTGGGAAGGAGCTTTATAACACCACCATATTTAAATAC
GCGCCAAGCTATTATGATCCACCCGAGGTTGGAGATGCGTACGGTGGTGT
TGGCTGGTCAAAGATGTTGATAGGCACAATGGACAGTTGGGATGCGTGTT
ATAGGTTCTGTCTTGCGGCAAGTCTATCGACCAACCCTTCTTACAATGGA
GCATCGTATCACAATGGAAAATATGGAGAATTGTTCTGAAATATGTTACA
ATAAGTTCTTAACAAGTGATCAATCAATAAATGCGGCGCTTGTTGATAGA
AACAATGGAAATTGTTTATGCAGCAAGAATATACTGGTTGTTGGCTCAGA
TGAAGCATCCTCCTACAGTGTTTGCATCTTTAAAAAACCAAAGGAGACAG
GGTCGTATATTATAGATTGTTTGAACTGGCTTTACTACGTTGAAGTCAAT
GTACCCTCCGATCCTAACGTCGGTGAACAAAAAAATAGCGTATATTCCGG
CTATATCTGTTATGTTTTGTGTCGACATTATCAGCCTTTTCAGGCGTCAA
ATTATATTGGTGCGATGTATAAAGATTCAATGGAGTGTTGGTGCTTGAAA
AGAAACGATTTAACGACTACCGCCTCAAATACGACCAAGATTTGTTATTG
GTGAGCGATCATGTAAGATCAGAACCGTACAAAGAAAGATGTTGGTGTGC
AAACAGCGCTTACATAACTCACTACTCATCAGAATACAGAACTGCCTTCT
TCAGAGAACCACATCATGTCGATTCCATTACAGATCCGCCTACTGTGTTG
GTCGGCGTTTCGTATGGTATGTCAGGAAATGATGAGGACGAAATCACAGC
ATCTTATGGAAACAATGTATGGACTTATAAAGATTGCCTCGATTATTGCC
TTTGGAATGCTGTGTTAAAAAGACAAATCTACAATGCTGTAACATGGGGC
GCATCAAATATGAGATGTTGGTGCGAAAGTAATGCCCTACTTATTGATGA
ACGTCCTGGGAAGGAGCTTTATAACACCACCATATTTAAATACGCGCCAA
GCTATTATGATCCACCCGAGGTTGGAGATGCGTACGGTGGTGTTGGCTGG
TCAAAGATGTTGATAGGCACAATGGACAGTTGGGATGCGTGTTATAGGTT
CTGTCTTGCGGCAAGTCTATCGACCAACCCTTCTTACAATGGAGCATCGT
ATCACAATGGAAAATATGGAGAATTGTTCTGAAATATGTTACAATAAGTT
CTTAACAAGTGATCAATCAATAAATGCGGCGCTTGTTGATAGAAACAATG
GAAATTGTTTATGCAGCAAGAATATACTGGTTGTTGGCTCAGATGAAGCA
TCCTCCTACAGTGTTTGCATCTTTAAAAAACCAAAGGAGACAGGGTCGTA
TATTATAGATTGTTTGAACTGGCTTTACTACGTTGAAGTCAATGTACCCT
CCGATCCTAACGTCGGTGAACAAAAAAATAGCGTATATTCCGGCTATATC
TGTTATGTTTTGTGTCGACATTATCAGCCTTTTCAGGCGTCAAATTATAT
TGGTGCGATGTATAAAGATTCAATGGAGTGTTGGTGCTTGAAAAGAAACG
ATTTAACGACTACCGCCTCAAATACGACCAAGATTTGTTATTGGTGAGCG
ATCATGTAAGATCAGAACCGTACAAAGAAAGATGTTGGTGTGCAAACAGC
GCTTACATAACTCACTACTCATCAGAATACAGAACTGCCTTCTTCAGAGA
ACCACATCATGTCGATTCCATTACAGATCCGCCTACTGTGTTGGTCGGCG
TTTCGTATGGTATGTCAGGAAATGATGAGGACGAAATCACAGCATCTTAT
GGAAACAATGTATGGACTTATAAAGATTGCCTCGATTATTGCCTTTGGAA
TGCTGTGTTAAAAAGACAAATCTACAATGCTGTAACATGGGGCGCATCAA
ATATGAGATGTTGGTGCGAAAGTAATGCCCTACTTATTGATGAACGTCCT
GGGAAGGAGCTTTATAACACCACCATATTTAAATACGCGCCAAGCTATTA
TGATCCACCCGAGGTTGGAGATGCGTACGGTGGTGTTGGCTGGTCAAAGA
TGTTGATAGGCACAATGGACAGTTGGGATGCGTGTTATAGGTTCTGTCTT
GCGGCAAGTCTATCGACCAACCCTTCTTACAATGGAGCATCGTATCACAA
TGGAAAATATGGAGAATTGTTCTGAAATATGTTACAATAAGTTCTTAACA
AGTGATCAATCAATAAATGCGGCGCTTGTTGATAGAAACAATGGAAATTG
TTTATGCAGCAAGAATATACTGGTTGTTGGCTCAGATGAAGCATCCTCCT
ACAGTGTTTGCATCTTTAAAAAACCAAAGGAGACAGGGTCGTATATTATA
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009805XLOC_009805Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017545-proteinTCONS_00017545-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017545-exon-sc0000269-1575043694:140379..140801TCONS_00017545-exon-sc0000269-1575043694:140379..140801Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1575043694:138243..138527TCONS_00017545-exon-sc0000269-1575043694:138243..138527Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1575043694:137251..137406TCONS_00017545-exon-sc0000269-1575043694:137251..137406Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1575043694:136734..136832TCONS_00017545-exon-sc0000269-1575043694:136734..136832Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1575043694:136327..136503TCONS_00017545-exon-sc0000269-1575043694:136327..136503Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1575043694:135841..135939TCONS_00017545-exon-sc0000269-1575043694:135841..135939Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1575043694:134917..134946TCONS_00017545-exon-sc0000269-1575043694:134917..134946Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1575043694:133309..134117TCONS_00017545-exon-sc0000269-1575043694:133309..134117Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1510915933:140379..140801TCONS_00017545-exon-sc0000269-1510915933:140379..140801Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1510915933:138243..138527TCONS_00017545-exon-sc0000269-1510915933:138243..138527Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1510915933:137251..137406TCONS_00017545-exon-sc0000269-1510915933:137251..137406Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1510915933:136734..136832TCONS_00017545-exon-sc0000269-1510915933:136734..136832Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1510915933:136327..136503TCONS_00017545-exon-sc0000269-1510915933:136327..136503Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1510915933:135841..135939TCONS_00017545-exon-sc0000269-1510915933:135841..135939Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1510915933:134917..134946TCONS_00017545-exon-sc0000269-1510915933:134917..134946Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1510915933:133309..134117TCONS_00017545-exon-sc0000269-1510915933:133309..134117Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1491911889:140379..140801TCONS_00017545-exon-sc0000269-1491911889:140379..140801Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1491911889:138243..138527TCONS_00017545-exon-sc0000269-1491911889:138243..138527Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1491911889:137251..137406TCONS_00017545-exon-sc0000269-1491911889:137251..137406Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1491911889:136734..136832TCONS_00017545-exon-sc0000269-1491911889:136734..136832Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1491911889:136327..136503TCONS_00017545-exon-sc0000269-1491911889:136327..136503Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1491911889:135841..135939TCONS_00017545-exon-sc0000269-1491911889:135841..135939Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1491911889:134917..134946TCONS_00017545-exon-sc0000269-1491911889:134917..134946Clytia hemisphaericaexon
TCONS_00017545-exon-sc0000269-1491911889:133309..134117TCONS_00017545-exon-sc0000269-1491911889:133309..134117Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000269supercontigsc0000269:133309..140801 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
63.1675	59.1902	40.1146	38.1834	9.74776	7.02628	6.51872	7.9273	5.7818	7.16733	8.62355	6.67112	7.15558	6.41668	4.69536	5.25484	3.68306	4.76418	3.47482	3.11551	5.31601	5.36	28.5603	21.734	19.1001	14.2559	3.26223	4.28466	14.1136	18.2872
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017545 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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