TCONS_00017591 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017591
Unique NameTCONS_00017591
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1980

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017591 ID=TCONS_00017591|Name=TCONS_00017591|organism=Clytia hemisphaerica|type=transcript|length=1980bp
TACCACACTATAGTAACAGgagataaaaaatatttcatgacTTTCCTTTC
CAGACTTGATATGAAATAAACATCcaggatgacgtcatcattgagAAGGG
AATATGCTGCATGGCAAAGAGTGTTGAACGAATTCTGCCATCCGCAGATT
CTTCAAGAGTACGGTCAATTTGAGGATGATACGAGCAGGATGAAGTTTCT
CGATTGCATGAGAGGTTCGTTGATTAACCAGATGACCACTCACTCATTAG
ATGGAGGAAAAGAAGGAGGAGACAAAACTTACGCGGGTGGTCATACCATC
AGCGCCCAAGAGAAAAGAATCCTCGTGCAAGCTTACAAATTATTTGGCTG
CTCCTCGAAAATGAACCATGAATTCTACGCTATGATCAAAGATCAATTAT
CACATTGGGCCATACCAAAACCAATTCATGACGTGATATGGCGTCACAAC
TTCACCATCTTCCATACAAAGTTCAAGGAAGCCTCTGTATCAAACAAAAG
TCATATCATGACGACAGACGCAGCTGTTGTTAAGGAAACCAACAAAAATG
GCGTCGATTTTTCGAAACTGACTAAAGTACGTTGTTCAAGTCTGAAACTT
TTCCATACCGCAAAAGGGAAGTATATAGAAGGGAAAATTGTAGTGGCTCC
TGTCATCTTTGTAGGTATAACCACCATCATAGAGGACGATTTTGGTGATC
ACGCCCAAGTGACTTTTTACAACATGATTCAAAGTACGGATAACAGATGG
GAATTAGCAGAAGCCAAATTTCCAATAGGTGGGCGTATCCGTGTAGCGGA
ACCCTTCTATAAAGTCTTTCAAGATGGGAATCGTGGAATTCGGGTGGACT
CGCCCACTGAAGTACAGATTTTGGGCGGAGAAAATCCGTTTGACATGACA
GAGATACGTGAAAGAGGGAAGGCTTTGATGCTTAATAACGAATATATAGC
TGCTCTGGATGTTTACGTTGAAGCTTCGAAACACTTTTCCTGCATCCCAA
CCCTCCTTAACAACCGTTGCCAAGCCGAAATCCGCCTGGAGCAATACGAG
GAAGCACTTTTAGACGTAGCAGCTGTTTTATTTCTCGATGAAGCGAACCC
AAAAGCGAAACAGCGTTATGAAGTGGCTTTCTCCAAACTGAAGCAAATTT
ACGGTGATGATTGTCAACTTGTATGGAAAGCCGTACTTGAGAATTCACAC
GTGGGGCGTGACGCCCTCAACGCCACCCGTGGTTCAAAAGAGGAAGGAAA
CACAGCTTTTCGTGAAGGGCGTTTCGAAGAAGCAAAACGCCAATACACGG
GCGCTCTAAATGACAAAGATGTCTGTACATTGTTAAACAATATTGCTatc
gtttgtttgaaaacagACATGTTTCAGAGCTCAATCTCTGCAGCAAATGT
CACTTTAAGAATTGCTAAAAATAGTGCTTTGAAACAGAAAGCTACTTTTG
CAATGACCAAAGCGTTCTCCATGCTTGGTGAGTTAGATATGGCAGAGCTC
AGTGGACGGGGTGACGAATCGCTTGAAGATTTTTGGAATGAAAGTCGAAA
GCCGATGCAAATGTTGCTCAACATTCTAGAATGTCTGCCACAGTTTGCCA
ACATTGGTTGGAAACCGACCTATACTGTAGGGCTGGAGGGAAAGAATTTG
CCAATCGATTACTGTGTATCTGAAGCTATGGAGCACGGTTTTATCCCCGG
TAGAGGACGTGGCTTGATTGCTCGACGTGATATCTTTGAACACGAAGTGT
TGATCGTGGACCGGATGATATGTAGCAAGCGAGGTGATCATGGTGCAGAA
GACGGTGTTGTATTTTCTATGAACACAAAAACACATGTAGTGGAATATCA
ACAAAAACGTAAATTAGTCACCAAAATACTGGAGCTTAGTAAATACGATG
GTTCTTTCGCTAAAAAGCTTCTGTGTTTGGAAAACCAGCCTCGACAAGCC
ATCTTTGAAAAGCTCCCTTTGATTAGTGAT
Run BLAST on NCBI

protein sequence of TCONS_00017591-protein

>TCONS_00017591-protein ID=TCONS_00017591-protein|Name=TCONS_00017591-protein|organism=Clytia hemisphaerica|type=polypeptide|length=634bp
MTSSLRREYAAWQRVLNEFCHPQILQEYGQFEDDTSRMKFLDCMRGSLIN
QMTTHSLDGGKEGGDKTYAGGHTISAQEKRILVQAYKLFGCSSKMNHEFY
AMIKDQLSHWAIPKPIHDVIWRHNFTIFHTKFKEASVSNKSHIMTTDAAV
VKETNKNGVDFSKLTKVRCSSLKLFHTAKGKYIEGKIVVAPVIFVGITTI
IEDDFGDHAQVTFYNMIQSTDNRWELAEAKFPIGGRIRVAEPFYKVFQDG
NRGIRVDSPTEVQILGGENPFDMTEIRERGKALMLNNEYIAALDVYVEAS
KHFSCIPTLLNNRCQAEIRLEQYEEALLDVAAVLFLDEANPKAKQRYEVA
FSKLKQIYGDDCQLVWKAVLENSHVGRDALNATRGSKEEGNTAFREGRFE
EAKRQYTGALNDKDVCTLLNNIAIVCLKTDMFQSSISAANVTLRIAKNSA
LKQKATFAMTKAFSMLGELDMAELSGRGDESLEDFWNESRKPMQMLLNIL
ECLPQFANIGWKPTYTVGLEGKNLPIDYCVSEAMEHGFIPGRGRGLIARR
DIFEHEVLIVDRMICSKRGDHGAEDGVVFSMNTKTHVVEYQQKRKLVTKI
LELSKYDGSFAKKLLCLENQPRQAIFEKLPLISD
Run BLAST on NCBI

transcript from alignment at sc0000271:111705..115002+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017591 ID=TCONS_00017591|Name=TCONS_00017591|organism=Clytia hemisphaerica|type=transcript|length=3298bp|location=Sequence derived from alignment at sc0000271:111705..115002+ (Clytia hemisphaerica)
TACCACACTATAGTAACAGgagataaaaaatatttcatgacTTTCCTTTC CAGACTTGATATGAAATAAACATCcaggatgacgtcatcattgagAAGGG AATATGCTGCATGGCAAAGAGTGTTGAACGAATTCTGCCATCCGCAGATT CTTCAAGAGTACGGTCAATTTGAGGATGATACGAGCAGGATGAAGTTTCT CGATTGCATGAGAGGTTTGTGGCGTTAACAGTGTAAATCGCTAATTTTAA CTTATTCTAACTTTCAATCCTTTAATGACATTATTTGACGTCTGTTTCCC CTGAGATTTGATTTAGTCGTTTTCCATGTTTTCAATAAATGTATTTCATT ACCGATcgtgttcaaaaataaaggcctgttttgtgacatttttaaaGTGG CTGACAATTTtgttaataaaatgagtatttttggtggctaacagtttatt ttttcaccaagCATAAGTAGAACGATTAACCTTTCCAATTGTTNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTtaccatttttttcatcaaaatatgttctttgtgtaaatac cgatcatcatataaaatttcaacgttttatttgaaatatttcccaagtta ttcaagaaatactcaatttttgagttccctaaatgtcacactatttttta ACATGATCTACCATCAACTTCAGGTTCGTTGATTAACCAGATGACCACTC ACTCATTAGATGGAGGAAAAGAAGGAGGAGACAAAACTTGTATGTATTTC TAAGCCTTACACCTTTGCTTTTAAATAATAAACTCATATCACACATGGTA AATGCAGTAGAACGCTGGACAGATTGCATTgagaaatacacgctttttcc tTTATAATTATAAGAGTatactttatttataagaatattcatgatgaaat tgtcCAAGAAATTACGAATGTGCTAAAAATACTATCATCATGGAAActaa acctaagaataccatttttagagccttttacctgtaaattgccaattatt cccCAGCAATGCTAAAAAGTTTCACAACAATGCCAATTTCTTGCTTTAGG TGTATACTGCATGCTAGATTTAGACTGGGTTTGCATCCTAACCTaagatt tttcccaaaaagaataaaaaatatccatgatgaacAAAAACCATTCCTAT AAAAAAGCATAtaaatctgatttttaaaaacttgTCAGAAATTATtctga aatttctgaaaatttgtcactctttaaaaattttccttaaaactaaGTTA CCATACACAAAGCTTATTATTTTCAAGACTTCTCGAAAGCTTGTCGTATA TACATTTAAGTCCGTCCAAtctcattttttcatttattccACTTTCAGAC GCGGGTGGTCATACCATCAGCGCCCAAGAGAAAAGAATCCTCGTGCAAGC TTACAAATTATTTGGCTGCTCCTCGAAAATGAACCATGAATTCTACGCTA TGATCAAAGATCAATTATCACATTGGGCCATACCAAAACCAATTCATGAC GTGATATGGCGTCACAACTTCACCATCTTCCATACAAAGTTCAAGGAAGC CTCTGTATCAAACAAAAGTCATATCATGACGACAGACGCAGCTGTTGTTA AGGAAACCAACAAAAATGGCGTCGATTTTTCGAAACTGACTAAAGTACGT TGTTCAAGTCTGAAACTTTTCCATACCGCAAAAGGGAAGTATATAGAAGG GAAAATTGTAGTGGCTCCTGTCATCTTTGTAGGTATAACCACCATCATAG AGGACGATTTTGGTGATCACGCCCAAGTGACTTTTTACAACATGATTCAA AGTACGGATAACAGATGGGAATTAGCAGAAGCCAAATTTCCAATAGGTGG GCGTATCCGTGTAGCGGAACCCTTCTATAAAGTCTTTCAAGATGGGAATC GTGGAATTCGGGTGGACTCGCCCACTGAAGTACAGATTTTGGGCGGAGAA AATCCGTTTGACATGACAGAGATACGTGAAAGAGGGAAGGCTTTGATGCT TAATAACGAATATATAGCTGCTCTGGATGTTTACGTTGAAGCTTCGAAAC ACTTTTCCTGCATCCCAACCCTCCTTAACAACCGTTGCCAAGCCGAAATC CGCCTGGAGCAATACGAGGAAGCACTTTTAGACGTAGCAGCTGTTTTATT TCTCGATGAAGCGAACCCAAAAGCGAAACAGCGTTATGAAGTGGCTTTCT CCAAACTGAAGCAAATTTACGGTGATGATTGTCAACTTGTATGGAAAGCC GTACTTGAGAATTCACACGTGGGGCGTGACGCCCTCAACGCCACCCGTGG TTCAAAAGAGGAAGGAAACACAGCTTTTCGTGAAGGGCGTTTCGAAGAAG CAAAACGCCAATACACGGGCGCTCTAAATGACAAAGATGTCTGTACATTG TTAAACAATATTGCTatcgtttgtttgaaaacagACATGTTTCAGAGCTC AATCTCTGCAGCAAATGTCACTTTAAGAATTGCTAAAAATAGTGCTTTGA AACAGAAAGCTACTTTTGCAATGACCAAAGCGTTCTCCATGCTTGGTGAG TTAGATATGGCAGAGCTCAGTGGACGGGGTGACGAATCGCTTGAAGATTT TTGGAATGAAAGTCGAAAGCCGATGCAAATGTTGCTCAACATTCTAGAAT GTCTGCCACAGTTTGCCAACATTGGTTGGAAACCGACCTATACTGTAGGG CTGGAGGGAAAGAATTTGCCAATCGATTACTGTGTATCTGAAGCTATGGA GCACGGTTTTATCCCCGGTAGAGGACGTGGCTTGATTGCTCGACGTGATA TCTTTGAACACGAAGTGTTGATCGTGGACCGGATGATATGTAGCAAGCGA GGTGATCATGGTGCAGAAGACGGTGTTGTATTTTCTATGAACACAAAAAC ACATGTAGTGGAATATCAACAAAAACGTAAATTAGTCACCAAAATACTGG AGCTTAGTAAATACGATGGTTCTTTCGCTAAAAAGCTTCTGTGTTTGGAA AACCAGCCTCGACAAGCCATCTTTGAAAAGCTCCCTTTGATTAGTGAT

Coding sequence (CDS) from alignment at sc0000271:111705..115002+

>TCONS_00017591 ID=TCONS_00017591|Name=TCONS_00017591|organism=Clytia hemisphaerica|type=CDS|length=5706bp|location=Sequence derived from alignment at sc0000271:111705..115002+ (Clytia hemisphaerica)
atgacgtcatcattgagAAGGGAATATGCTGCATGGCAAAGAGTGTTGAA
CGAATTCTGCCATCCGCAGATTCTTCAAGAGTACGGTCAATTTGAGGATG
ATACGAGCAGGATGAAGTTTCTCGATTGCATGAGAGGTTCGTTGATTAAC
CAGATGACCACTCACTCATTAGATGGAGGAAAAGAAGGAGGAGACAAAAC
TTACGCGGGTGGTCATACCATCAGCGCCCAAGAGAAAAGAATCCTCGTGC
AAGCTTACAAATTATTTGGCTGCTCCTCGAAAATGAACCATGAATTCTAC
GCTATGATCAAAGATCAATTATCACATTGGGCCATACCAAAACCAATTCA
TGACGTGATATGGCGTCACAACTTCACCATCTTCCATACAAAGTTCAAGG
AAGCCTCTGTATCAAACAAAAGTCATATCATGACGACAGACGCAGCTGTT
GTTAAGGAAACCAACAAAAATGGCGTCGATTTTTCGAAACTGACTAAAGT
ACGTTGTTCAAGTCTGAAACTTTTCCATACCGCAAAAGGGAAGTATATAG
AAGGGAAAATTGTAGTGGCTCCTGTCATCTTTGTAGGTATAACCACCATC
ATAGAGGACGATTTTGGTGATCACGCCCAAGTGACTTTTTACAACATGAT
TCAAAGTACGGATAACAGATGGGAATTAGCAGAAGCCAAATTTCCAATAG
GTGGGCGTATCCGTGTAGCGGAACCCTTCTATAAAGTCTTTCAAGATGGG
AATCGTGGAATTCGGGTGGACTCGCCCACTGAAGTACAGATTTTGGGCGG
AGAAAATCCGTTTGACATGACAGAGATACGTGAAAGAGGGAAGGCTTTGA
TGCTTAATAACGAATATATAGCTGCTCTGGATGTTTACGTTGAAGCTTCG
AAACACTTTTCCTGCATCCCAACCCTCCTTAACAACCGTTGCCAAGCCGA
AATCCGCCTGGAGCAATACGAGGAAGCACTTTTAGACGTAGCAGCTGTTT
TATTTCTCGATGAAGCGAACCCAAAAGCGAAACAGCGTTATGAAGTGGCT
TTCTCCAAACTGAAGCAAATTTACGGTGATGATTGTCAACTTGTATGGAA
AGCCGTACTTGAGAATTCACACGTGGGGCGTGACGCCCTCAACGCCACCC
GTGGTTCAAAAGAGGAAGGAAACACAGCTTTTCGTGAAGGGCGTTTCGAA
GAAGCAAAACGCCAATACACGGGCGCTCTAAATGACAAAGATGTCTGTAC
ATTGTTAAACAATATTGCTatcgtttgtttgaaaacagACATGTTTCAGA
GCTCAATCTCTGCAGCAAATGTCACTTTAAGAATTGCTAAAAATAGTGCT
TTGAAACAGAAAGCTACTTTTGCAATGACCAAAGCGTTCTCCATGCTTGG
TGAGTTAGATATGGCAGAGCTCAGTGGACGGGGTGACGAATCGCTTGAAG
ATTTTTGGAATGAAAGTCGAAAGCCGATGCAAATGTTGCTCAACATTCTA
GAATGTCTGCCACAGTTTGCCAACATTGGTTGGAAACCGACCTATACTGT
AGGGCTGGAGGGAAAGAATTTGCCAATCGATTACTGTGTATCTGAAGCTA
TGGAGCACGGTTTTATCCCCGGTAGAGGACGTGGCTTGATTGCTCGACGT
GATATCTTTGAACACGAAGTGTTGATCGTGGACCGGATGATATGTAGCAA
GCGAGGTGATCATGGTGCAGAAGACGGTGTTGTATTTTCTATGAACACAA
AAACACATGTAGTGGAATATCAACAAAAACGTAAATTAGTCACCAAAATA
CTGGAGCTTAGTAAATACGATGGTTCTTTCGCTAAAAAGCTTCTGTGTTT
GGAAAACCAGCCTCGACAAGCCATCTTTGAAAAGCTCCCTTTGATTAGTG
ATatgacgtcatcattgagAAGGGAATATGCTGCATGGCAAAGAGTGTTG
AACGAATTCTGCCATCCGCAGATTCTTCAAGAGTACGGTCAATTTGAGGA
TGATACGAGCAGGATGAAGTTTCTCGATTGCATGAGAGGTTCGTTGATTA
ACCAGATGACCACTCACTCATTAGATGGAGGAAAAGAAGGAGGAGACAAA
ACTTACGCGGGTGGTCATACCATCAGCGCCCAAGAGAAAAGAATCCTCGT
GCAAGCTTACAAATTATTTGGCTGCTCCTCGAAAATGAACCATGAATTCT
ACGCTATGATCAAAGATCAATTATCACATTGGGCCATACCAAAACCAATT
CATGACGTGATATGGCGTCACAACTTCACCATCTTCCATACAAAGTTCAA
GGAAGCCTCTGTATCAAACAAAAGTCATATCATGACGACAGACGCAGCTG
TTGTTAAGGAAACCAACAAAAATGGCGTCGATTTTTCGAAACTGACTAAA
GTACGTTGTTCAAGTCTGAAACTTTTCCATACCGCAAAAGGGAAGTATAT
AGAAGGGAAAATTGTAGTGGCTCCTGTCATCTTTGTAGGTATAACCACCA
TCATAGAGGACGATTTTGGTGATCACGCCCAAGTGACTTTTTACAACATG
ATTCAAAGTACGGATAACAGATGGGAATTAGCAGAAGCCAAATTTCCAAT
AGGTGGGCGTATCCGTGTAGCGGAACCCTTCTATAAAGTCTTTCAAGATG
GGAATCGTGGAATTCGGGTGGACTCGCCCACTGAAGTACAGATTTTGGGC
GGAGAAAATCCGTTTGACATGACAGAGATACGTGAAAGAGGGAAGGCTTT
GATGCTTAATAACGAATATATAGCTGCTCTGGATGTTTACGTTGAAGCTT
CGAAACACTTTTCCTGCATCCCAACCCTCCTTAACAACCGTTGCCAAGCC
GAAATCCGCCTGGAGCAATACGAGGAAGCACTTTTAGACGTAGCAGCTGT
TTTATTTCTCGATGAAGCGAACCCAAAAGCGAAACAGCGTTATGAAGTGG
CTTTCTCCAAACTGAAGCAAATTTACGGTGATGATTGTCAACTTGTATGG
AAAGCCGTACTTGAGAATTCACACGTGGGGCGTGACGCCCTCAACGCCAC
CCGTGGTTCAAAAGAGGAAGGAAACACAGCTTTTCGTGAAGGGCGTTTCG
AAGAAGCAAAACGCCAATACACGGGCGCTCTAAATGACAAAGATGTCTGT
ACATTGTTAAACAATATTGCTatcgtttgtttgaaaacagACATGTTTCA
GAGCTCAATCTCTGCAGCAAATGTCACTTTAAGAATTGCTAAAAATAGTG
CTTTGAAACAGAAAGCTACTTTTGCAATGACCAAAGCGTTCTCCATGCTT
GGTGAGTTAGATATGGCAGAGCTCAGTGGACGGGGTGACGAATCGCTTGA
AGATTTTTGGAATGAAAGTCGAAAGCCGATGCAAATGTTGCTCAACATTC
TAGAATGTCTGCCACAGTTTGCCAACATTGGTTGGAAACCGACCTATACT
GTAGGGCTGGAGGGAAAGAATTTGCCAATCGATTACTGTGTATCTGAAGC
TATGGAGCACGGTTTTATCCCCGGTAGAGGACGTGGCTTGATTGCTCGAC
GTGATATCTTTGAACACGAAGTGTTGATCGTGGACCGGATGATATGTAGC
AAGCGAGGTGATCATGGTGCAGAAGACGGTGTTGTATTTTCTATGAACAC
AAAAACACATGTAGTGGAATATCAACAAAAACGTAAATTAGTCACCAAAA
TACTGGAGCTTAGTAAATACGATGGTTCTTTCGCTAAAAAGCTTCTGTGT
TTGGAAAACCAGCCTCGACAAGCCATCTTTGAAAAGCTCCCTTTGATTAG
TGATatgacgtcatcattgagAAGGGAATATGCTGCATGGCAAAGAGTGT
TGAACGAATTCTGCCATCCGCAGATTCTTCAAGAGTACGGTCAATTTGAG
GATGATACGAGCAGGATGAAGTTTCTCGATTGCATGAGAGGTTCGTTGAT
TAACCAGATGACCACTCACTCATTAGATGGAGGAAAAGAAGGAGGAGACA
AAACTTACGCGGGTGGTCATACCATCAGCGCCCAAGAGAAAAGAATCCTC
GTGCAAGCTTACAAATTATTTGGCTGCTCCTCGAAAATGAACCATGAATT
CTACGCTATGATCAAAGATCAATTATCACATTGGGCCATACCAAAACCAA
TTCATGACGTGATATGGCGTCACAACTTCACCATCTTCCATACAAAGTTC
AAGGAAGCCTCTGTATCAAACAAAAGTCATATCATGACGACAGACGCAGC
TGTTGTTAAGGAAACCAACAAAAATGGCGTCGATTTTTCGAAACTGACTA
AAGTACGTTGTTCAAGTCTGAAACTTTTCCATACCGCAAAAGGGAAGTAT
ATAGAAGGGAAAATTGTAGTGGCTCCTGTCATCTTTGTAGGTATAACCAC
CATCATAGAGGACGATTTTGGTGATCACGCCCAAGTGACTTTTTACAACA
TGATTCAAAGTACGGATAACAGATGGGAATTAGCAGAAGCCAAATTTCCA
ATAGGTGGGCGTATCCGTGTAGCGGAACCCTTCTATAAAGTCTTTCAAGA
TGGGAATCGTGGAATTCGGGTGGACTCGCCCACTGAAGTACAGATTTTGG
GCGGAGAAAATCCGTTTGACATGACAGAGATACGTGAAAGAGGGAAGGCT
TTGATGCTTAATAACGAATATATAGCTGCTCTGGATGTTTACGTTGAAGC
TTCGAAACACTTTTCCTGCATCCCAACCCTCCTTAACAACCGTTGCCAAG
CCGAAATCCGCCTGGAGCAATACGAGGAAGCACTTTTAGACGTAGCAGCT
GTTTTATTTCTCGATGAAGCGAACCCAAAAGCGAAACAGCGTTATGAAGT
GGCTTTCTCCAAACTGAAGCAAATTTACGGTGATGATTGTCAACTTGTAT
GGAAAGCCGTACTTGAGAATTCACACGTGGGGCGTGACGCCCTCAACGCC
ACCCGTGGTTCAAAAGAGGAAGGAAACACAGCTTTTCGTGAAGGGCGTTT
CGAAGAAGCAAAACGCCAATACACGGGCGCTCTAAATGACAAAGATGTCT
GTACATTGTTAAACAATATTGCTatcgtttgtttgaaaacagACATGTTT
CAGAGCTCAATCTCTGCAGCAAATGTCACTTTAAGAATTGCTAAAAATAG
TGCTTTGAAACAGAAAGCTACTTTTGCAATGACCAAAGCGTTCTCCATGC
TTGGTGAGTTAGATATGGCAGAGCTCAGTGGACGGGGTGACGAATCGCTT
GAAGATTTTTGGAATGAAAGTCGAAAGCCGATGCAAATGTTGCTCAACAT
TCTAGAATGTCTGCCACAGTTTGCCAACATTGGTTGGAAACCGACCTATA
CTGTAGGGCTGGAGGGAAAGAATTTGCCAATCGATTACTGTGTATCTGAA
GCTATGGAGCACGGTTTTATCCCCGGTAGAGGACGTGGCTTGATTGCTCG
ACGTGATATCTTTGAACACGAAGTGTTGATCGTGGACCGGATGATATGTA
GCAAGCGAGGTGATCATGGTGCAGAAGACGGTGTTGTATTTTCTATGAAC
ACAAAAACACATGTAGTGGAATATCAACAAAAACGTAAATTAGTCACCAA
AATACTGGAGCTTAGTAAATACGATGGTTCTTTCGCTAAAAAGCTTCTGT
GTTTGGAAAACCAGCCTCGACAAGCCATCTTTGAAAAGCTCCCTTTGATT
AGTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009838XLOC_009838Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017591-proteinTCONS_00017591-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017591-exon-sc0000271-1491911889:111705..111918TCONS_00017591-exon-sc0000271-1491911889:111705..111918Clytia hemisphaericaexon
TCONS_00017591-exon-sc0000271-1510915933:111705..111918TCONS_00017591-exon-sc0000271-1510915933:111705..111918Clytia hemisphaericaexon
TCONS_00017591-exon-sc0000271-1575043694:111705..111918TCONS_00017591-exon-sc0000271-1575043694:111705..111918Clytia hemisphaericaexon
TCONS_00017591-exon-sc0000271-1491911889:112628..112693TCONS_00017591-exon-sc0000271-1491911889:112628..112693Clytia hemisphaericaexon
TCONS_00017591-exon-sc0000271-1510915933:112628..112693TCONS_00017591-exon-sc0000271-1510915933:112628..112693Clytia hemisphaericaexon
TCONS_00017591-exon-sc0000271-1575043694:112628..112693TCONS_00017591-exon-sc0000271-1575043694:112628..112693Clytia hemisphaericaexon
TCONS_00017591-exon-sc0000271-1491911889:113303..115002TCONS_00017591-exon-sc0000271-1491911889:113303..115002Clytia hemisphaericaexon
TCONS_00017591-exon-sc0000271-1510915933:113303..115002TCONS_00017591-exon-sc0000271-1510915933:113303..115002Clytia hemisphaericaexon
TCONS_00017591-exon-sc0000271-1575043694:113303..115002TCONS_00017591-exon-sc0000271-1575043694:113303..115002Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000271supercontigsc0000271:111705..115002 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.901 11.8186 19.3931 16.4211 3.59301 2.3269 3.94053 2.72461 1.7894 2.88557 2.21223 1.60099 1.82526 1.92322 2.77554 3.21052 4.49648 3.82264 1.63972 1.44845 1.80129 1.75721 5.99491 5.28318 4.90385 5.58589 1.20862 1.55371 4.35799 4.07764
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017591 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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