TCONS_00017695 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017695
Unique NameTCONS_00017695
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1730

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017695 ID=TCONS_00017695|Name=TCONS_00017695|organism=Clytia hemisphaerica|type=transcript|length=1730bp
NNTGGAGTCTGTTGGACCACTTCAAACACAATTCAACTGcACAAGAGAAC
GAAATACAAAATGTATTTTGGAGGGTGTGAAGGAGGAGCATCACATTCTT
CTGTTGTCATCACCAATAAAGATGGTGTCATTTTGGGTGAAGCTTCCGGT
GAAGGAACTAATTCATGTTTGATTGGTGTCCCAGAATGCTGTAAGAGGAT
TGCAGACCTTGCACAGAAAGCCAAAGTAGCTGCTGGCCTTGGTCCTGAAG
TAGTGTTACAATCTCTAGGAATGTCACTGAGTGGTGCTGATTACCAGGAG
AGAATGGATGAAATTTCAAAGCACATGTTGGAGAACTTCCCACAGGTTGC
ATTGCATTGTCACACATGTAATGATACTTTATCACCATTGGTTACTGCCA
CTGACGGAGGTGGTGTGGTCATCATTGCAGGGACTGGATCCAATTGTCTG
TTGGTCAATCCTTCAGGTGCTAGCAAGAATTGTGGTGGATGGGGTCATTT
TATTGGTGACGAGGGTTCAGCATGTTGGATGGTtcttcaaacaatcaaaa
caatataCCACGACTCTGATGGTTTTGTTCTTGCACCGCACAGTACAGAA
TTCCTTAAGAAAGAATTATTCGATTATTTTGGTATGACTGATCTGTTCGG
TATTTTAACACATCTTTATCCGCCGTCTGGGAAAATCGATAAAGCTTTTA
TTGCGCGTTTTTGTGTCAACGGAATCGTAAAAGGTTGTCGCGCGGGCGAT
GCTCTTTCGCTTCACGTGATGCGTAATACTGGTATTATGTTGGGACGCCA
TGTAAAAGCGCTTATACCTAGAATGGAAAACGCTCTGttacaggaaaatc
aaaataccGGATTGAAAATTATTTGTGTGGGCTCTGTATGGAAAAGTTGG
GAATTCCTGAAAGATGGATTTCTGGAAGGAATTACACCAGTTACAGATGA
AGAAAAAACTCTGAAAAAGTTTAGTTTGGTGAATTTGAAAGAAGGTGCAA
AAGCTTCTGTAGGGGCAGCCGCTTGGGCATCTAAGAAAAATGGGGATGAT
AACATCTTGAACTTGGATTAtagtaaaacttcaaatattttctatCAACA
TGAATTTTGAGCTGGCATtagttgttttttctttcatttgtaaaatttta
aaattttgtaatttttgtccTTGAACAATAAGCTCTTTATAGAGGTAACG
AACCTAACTTTCTAGAACTATTATGGAACGCCTAAAAGCTTTTCTCTATA
ATCTTTCCTTTTAAACTCATAACTTTCATCTACATTGACACACATCgctt
ttgtgaagtttttatATCTTAAGTCAAATTATTTACTCAAAAATTATATT
CTAAGATCCCGAATACTAGGGGGTCCGAAATCTTTTCGGTATAATAAATA
GGGGGAACCTAATTACCAGGGTGTTGAAATTTTACCTCTAAAACCCCCTT
AATAAGGCAATTATAGACTAAAATGAGGCTCTTTAGAGCAGTATATTGAA
TATATATTGAAAATCAAACCCCCGAGTAGAGTAAATTTTATAATGATTTT
TTCATCatgttcaattttaatttattatgaCATGCATTTGTATCTTTAAT
TTTTCTTACAGACAAATCTATCAATAACTAAATTTTTATGATaggtctta
ttattcaaattgttATCATCATATAATGAGAAGATAATTATTATtcctga
aatttgaaaaaggtaaGGCTGAAAGAGTCc
Run BLAST on NCBI

protein sequence of TCONS_00017695-protein

>TCONS_00017695-protein ID=TCONS_00017695-protein|Name=TCONS_00017695-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
XGVCWTTSNTIQLHKRTKYKMYFGGCEGGASHSSVVITNKDGVILGEASG
EGTNSCLIGVPECCKRIADLAQKAKVAAGLGPEVVLQSLGMSLSGADYQE
RMDEISKHMLENFPQVALHCHTCNDTLSPLVTATDGGGVVIIAGTGSNCL
LVNPSGASKNCGGWGHFIGDEGSACWMVLQTIKTIYHDSDGFVLAPHSTE
FLKKELFDYFGMTDLFGILTHLYPPSGKIDKAFIARFCVNGIVKGCRAGD
ALSLHVMRNTGIMLGRHVKALIPRMENALLQENQNTGLKIICVGSVWKSW
EFLKDGFLEGITPVTDEEKTLKKFSLVNLKEGAKASVGAAAWASKKNGDD
NILNLDYSKTSNIFYQHEF
Run BLAST on NCBI

transcript from alignment at sc0000273:192553..202692-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017695 ID=TCONS_00017695|Name=TCONS_00017695|organism=Clytia hemisphaerica|type=transcript|length=10140bp|location=Sequence derived from alignment at sc0000273:192553..202692- (Clytia hemisphaerica)
NNTGGAGTCTGTTGGACCACTTCAAACACAATTCAACTGGTAAGTTATAA
AGTTTGCAGCTTCATTTATTTATGGAAGAGCTTCAAAGAAATATACCTTT
TTTTATAATAAGACAGCCATGTTGAATACTTTGTAGTCCAGCATAAAAAC
AATGATACAGCCATGCATAATTACTGTATAATGCATGTTTTAATAATTAC
GCATGGTTGTATCATTATTTTTATGCTGGACTACATAATTATTTAGCATG
GTAGCCTCTTTGAAAAAAGGTCTATTTCATTATTGAACATTGACCACCCA
AAACTTTTACCTGACCTGACAGGGGCTGGCTGAAGCCCTGAAAAACATAA
AAACCTGGCGAGAAAGTTTGCTGCTGAATCCAATCTGCCAATCTTTCTGA
TTTTTATCTGTTTATGACATTTTTAATTCAGACAAACCCAGGAGGCGGTG
TCAACCGAACCCTATCGAACCGATTTTTGTTATCGAACCAACTTTATCGA
ACAAAATCGAACGATAGCTGTTCGATTACCGAACCCGATCGAACAGCTAT
CGAACTTTACGAAAATTTCTTGATAAGTTCGATTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATGGCAAATTTTCGC
TTGGGATAGAAGTTAAAGGTACGTGCACAATATAGCAAAACTGCTTCGCT
CATAAATTCGCTTCGCAAAAAACAATGATACAGCCATGCATAATTACTGT
ATAATGCATGTTTTAATAATTATGCATGGTTGTATCATTGTTTTTATGCT
GGACTACATAATTATTTAGCATGGTAGCCTCTTTGAAAAAAGGTCTATTT
CATTATTGTATTGAACATTGACCACCCAAACAGTTACATCAAAATGCCTC
GAAAATGTTGATATGAAAATTGCGTAATCAGAGAACGTATGTCTCGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCGACAGTCGGGTGCTGTCGGGTGTTTTGTCGGGT
GCTGAAATTTCTAAATTTGCGAAAACACCCGACAAATAGTGCACCCGACA
GTCGGGTGCTTAAAATTCCTAACTTAGTGAGAACACCCGACAATCAACAC
CCGACACCGCCTGATGTGCATTTGGCGGATTTACGCCCTATAATACTATT
TCCCGCCATCTTTTCCGATGCCGTGGGTATCAGTCAAATGATATGAACAT
CATCGGCCCTTATTAGGCAATATTTCTCGTCATTGGCGGAAAAGGGCCGG
CGTGTAAATTGGATCAGCGATGGGTTTAATAAATATCTTCGAGTCCTACC
TTAAGGGAAGAAATTTTCGCGAGAAGAAATTTTCGCGGAAGAAATTTTCG
CGGAATTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNACACCAAAATGGCTAAACCGCGAAATCAAATTCCGCGAAACACGAATA
TTCTCACAATTAAAAAAATCACCCCTAAAATTGGTCTTTTTAGGGCAAAA
TAGGAACGCATTGATGATCAAATGGCCTTATATATAATTTATTATTTTAC
ATATTTTTAATTGTATGTATTTCAAAGATTGTCTGTAAGACCATGTTCAG
ACGTTACGGTCTCGTATCATTCCGGTATGGTTTCCGTGATTGTTTCCGCG
ATAGTGTTCATATTGGTTTCGGAGCGTTTTGGAGCAAGAAAACGGAGCAG
TTCTGTTCCGATGAAAAAAGCGGAGCGAAACCGTTCCGATCTGCTTTGCT
TTGTAACGTCTTCTTTTTTTCTTTTTTTCAAATTTTGGCGTTATTCAAAC
TTGTTTCAGAACCGTTTCGTTTTGGAACGATACGGAACCGTGACGTCTAG
AACATGGTCTATATTATAAAAAAGGTTTTTGTCCAATTTTCTTCTTTTGA
GCAACACACACGTTGTCCCCAGCCATCCAAACAGTTTGTATGTACCGTAC
GTATGTACGCAATGGTTGTATAAGAATGGTGGTGGTATGCTAAAAAGATA
GAACAAAATATTCGGCATACAAGTAGCTTTTCGGTACAAAACGAAAACCC
AGGTGATATATAGCGTCCAGTTGACGAAGTTACTCAGTCAGCTCAGATAA
ATTGAACGTCACTTAAGAGTTTAATGACACACGATTTTCAGGTAGGTAAA
AGAGGGAAAACCTACCTAGATAAACTTACTTTAGGCGTACAAACTTTCGC
GAGCAGAAACTTTCGCGAGGACGAAAAATCGCGAAATTTACGACATTTAC
TTTCGCGAATTTAACGGAAAAATATTTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCTTAGAGACACAAATACT
TCTTGGGTTGGCTTGAAACATTTGTCCTTTGACTTATTAGTCTTTTAGCA
GGCTAAAAAGTGCCATAAAAGTTACATTTTATTCAAGGTTTGAAGTTTTA
CAGATTTTCTATTTTGTCAAGAATTTTTCGCGAGCATAAACTTTCGCGAA
AAGGGCCAAAATTCGCGAAAATCGCGAAAGTTTCTGCTCGCGAAAGTTTC
TACGCCTAAAGTAATACCCAGAATGGATTTTTGCCTACCTAAGTACTAGT
GAAGGTTGCGTTGATTTGGTGACTCATTGATGAATCATCTCTATTTGTCT
TCATCGTCGTGTCGTTGTTTTACAAGTCGCTCATCACGCATGAATGAATA
AAAAGAAAAAAAAAACGTTAATCCGTGAACTTCTCCCAAGAACATCAAAA
CCAGAGAATCAGAAATCACATTTTAACTAAAGAGATTGGTTTGACGAGAG
AGTAATTTCGTCAAAAACGCCGCGCGCCCACTACGGGCAGGGTGGCGTTA
GTAAAAAGAACCCGTTTTTCCACCCTTCAGAAATCACCACCCGCCCGTTA
CATGTCGGGTGCTGTTAAGAGCGTCAAAGATATAGCACCCGACAAAGTGC
ACCCGACTGTCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
ATCGTTCGATAGGGTTCGATGAAGTTCGATTAGTTCGATAATCGAACAGT
TCGATTGACACCGCCTGGACAAACTTTTCTAAAACGATAGGTTAAGATAA
GTCTCTTCATGTTCATTTAGGTGGCCAGTGGATTGTTTAAAATTATGTTT
TAAAAATAAAGAAAAAATCCAAAATGTCTAGGACCAACTTTTTGATATGT
TTCTTACTCAATTTGAGGTTGCTGATTCAGTTCAGAATTTGAATGTTACC
AAGCTTGAAAACCCGCAGTTTTTGGGGGGTCTTCAAAATCAAAAAGGACC
TTTACCACGTGATAGAGCTCTTCAAACTGAGCAAAAAAATGTATTATATC
AAATTCTTAACTTTCCTAGATTAAAAGTTATGGGCGTTTTTGTGGTAAAA
AAGTCCTATAATTTTGCATAAATTGTGCAGATTGTGGGGAAATTACCTGT
TTTCAATCAATTTTTGACCATAAAATCGTCTGTCTATAACTTTTGATCTA
GAAAAGTTGAGACTTTGATATAATACATTTTTTTGCTCAGTTTGAAGAGC
TCTATCACATGGTATACAGTAGGTCTTTTTTTATTTTGAAGACCCCCAAA
AATCACGAATTTTCAGGGCTTACAATTTTGCCTAAAATCGCAAAAAATTG
CAAATTACGCAAAAACTGCAGGTTTTCAAACTTGGTAACATTCAAATTCC
GAATCAGCACCCTCAAATTGAGTAAGAAACATATAAAAAAGTTGGTCCCA
GACATTTTGAAAAAAAGTGAAACGTTTTGGTGGCACTGGCCATGGCCTAA
TTAGTTTAGAAAAATCTAGATACTGAATGATGTGATGACTGGATGAGATA
TTACAAAATATTCTGTTTCTGAGCTTGGATTTTCCAGGGCTTTTTGTTCA
TTTTTCATTATATTTTCCAAGAGGATCATTGAAGACTTCCAGGGGAGTCT
TAACTCTTAAAAACTAGACTTTCCTCTCAAAACAACTCACAGCCTGCTCA
CAGCCTGCTCACAGCCCACTCTATCTATGCCCTGAACATACCACGACCCT
TCCGATGCACCCAACAGTCGGGTGCTATTGTTGAGCTCTGCATGTTGGCC
TCCACCTGATCTCACGGTAGGTATTAGAACTTAAGAGTTTTTGTGGATAT
GGTACTGTGGCAGAAGGTATCAGTCAGTCAGGACTAGCTAAGTCATTTTT
TGTTACTTTGTTTCGTCTTTGAAATATTAGCAAAAATCTCACGCGTATGC
CTGTCTTTTATCCACACATTTTAAATTAGGCTTTCTTAATTCTTGTCAAT
TTTATTGAAAATTGTGAAACTACTTAGTAATAAAAATGATTTGCAATTTC
ATTTTGGAAAAAAATCAATGTTTCAACGTTGCTCAACAAAAAGCTCAAAA
ATACCTGTAGGAGGAACGGGTTTCTGACTCTGAAAGCGTTCAACTTTTAT
CTAGTTTAGTATTACCGGGTGTCCCGTTGCTGATGTGAGGAGTTCATCAA
TTATTGATAAAAGAAGGGCTTTGATTATGATGATTTTTAATACCCTTATT
TTTCGCCTTCTTTCAACTTTTTTTTAAAGTATTTTTTAGCAAATTTAGAC
GGTAACTTTTGATCTAGATAAACAATTTTGACAAATGACCCCTGAAAATT
TAAGCTCATCCTTCCTCTTTCCAATGCAAAAAGATTGATTGTTTAAAAGT
TCATAGAACTCAAGAAAATTCACTTCAAAGAGGGGAGGGGGACTTTCTTT
TAGGACACCTGGTACTTTTTAAAAACACAATAGTTGAGCACTTACAAAAC
AGAACAATCAAACAGTTTAACTTATTGAGGGATTCATTAAAAAAAATCAG
AATATCCAGAAAAAAAACACACACGAAGGCTGGACTTTCATAAATTGTCA
AAAGTTTTCTGACTGACCGTTTCGCCTTCAAAATCTAGGATCAGGTGAAG
AAAAATGAAAAATCAAGATGCAACAGAAAAGTTAAGACATGCAGTAATTG
CCAATCATTGTCAATGATTTGTATTAATATCTGATCATGAACAAACTTGT
TATTGTTTGTTTCTATGCTTCCGTTCATAATCCAGTTTAGATAAAGATTT
TCCATCTTGTTTTCATCAAAGGTATTAATGGCGACTACATTTAGCTTAGA
GATGTAATGGGCAAGCAGGGCGATCAGTCAGTAATAGCCCTGAATTCTTT
TATCATCCTGGTCAAAGAAAAATTATTTCACAGAATTATGCTGCTCAGCT
TTCTTTGTTTTTGACAAACTGATTTCAAAAGTACTCGAACAATTTGGCTA
AGAAATATCTTATTCAAATATTTTATTTTCATTGAAGAGATATCAACGAA
TAGAAGCATATCAACCTTCAAACCATGTTATTATTAGTACAAAGTGCCCA
TTTTTTTGTGACTAAACTATTAATAAATACATTAACACTTGAATCACCCC
AATGATCAAGGTTTTGTTTAACTTTCCTAATAATTTCATTTTAGCACAAG
AGAACGAAATACAAAATGTATTTTGGAGGGTGTGAAGGAGGAGCATCACA
TTCTTCTGTTGTCATCACCAATAAAGATGGTGTCATTTTGGGTGAAGCTT
CCGGTGAAGGAACTAATTCATGTTTGATTGGTAAGTGTTTGTATGTCATA
TAAAGATTCTTAAAATACTCCTTTAGGCGAACGCGACAGTCTATTACATA
ACTAATTGCTCTTTACTTCAGTGGATGCAAGTAAAATAATTTTATGTCAA
ATTGGCACGTTGACATTCTCCCGAATTAGCACGTAACCAGCGCAACGTCC
TTTAAAGTATTAGGGATTTATTTCCGTAATATGGGGCGGATAATTTCCGG
CCCGAATGGCTGGAGTAATTTAATATGCAGAATTGAGTCAATAGATCGTC
GCGTTCTCCCAAACGACTGTTGTAAGATGGAACTTAATAGAGACAATGGT
CAGGATTTGGCGACGCTTTTCTGCAAGCCAATGATCTTTTACCTCTGAGA
AAATTCGTAGCATTGAGCTGACATCAACTTTTGCGTTTTATATTTTAGAT
TCTTTAAAAAGGTTATATACATCTCAGCTTTTTGATATCAATTCTAAGGA
GATATTTTCAAATATATATAGGTGTCCCAGAATGCTGTAAGAGGATTGCA
GACCTTGCACAGAAAGCCAAAGTAGCTGCTGGCCTTGGTCCTGAAGTAGT
GTTACAATCTCTAGGAATGTCACTGAGTGGTGCTGATTACCAGGAGAGAA
TGGATGAAATTTCAAAGCACATGTTGGAGAACTTCCCACAGGTTTTAGTT
GAATTTTCATTGAGACTTTCACTTCGACTTTTTTACATAGATCTTTTTGA
CCAGAGGCTTTGGAACAAAGCAATGTAACTTTTAAAAGACTACTTCATTG
CCCTCCAGAGCAAAAAACTGTTTTCATTGCTGACACTATCACATTTTTAG
GGCTTATACAAGCCTAATGATGTCACCAAATTAATGTCACGCTTGCTTGA
CCATGGGATTAAGGAGATGTTTCATCCCATCATTTTTCAATGATATTTCA
TGTATCGCGAGAGCCAATCAATAAGTTTATTGTCTTGCTTCTGTTACAAT
TCTCATTTTGTCATTCGTTGTTGTAATACAATTTTCTTTTCCCAGGTTGC
ATTGCATTGTCACACATGTAATGATACTTTATCACCATTGGTTACTGCCA
CTGACGGAGGTGGTGTGGTCATCATTGCAGGGACTGGATCCAATTGTCTG
TTGGTCAATCCTTCAGGTGCTAGCAAGAATTGTGGTGGATGGGGTCATTT
TATTGGTAAACTCATTTTTTAGGCTTTTTAATCTGATTAAAAACATTTTT
TGTTTTTCAAATCAAGAAACGTAGGAAATACTTCTTTTTATAGGTTAAGG
TTTTATTTCTACATACGTGTTTCATACCAGACACATGTTTCATATCAGGA
CATATTGTCTCCCTATTGTTATATATTGTGCTGAATAAACAAAAAATTCT
TTTTCTTTTACTCTTTCTGACAAATCTTGCTCCATATCTGTGTCAATTCA
ATGTGAAAAAGCTTGTTGTAAATTAAAATATCCCTCTTTATAAACAAAAC
CTTTTAAATGTAATTTTGCAAAAACTTGATTCTCTGCAGCATAGTATTAT
ATCAAAATTTCAAGCTGAACGAAATATTTTACGAAAAGTCAAAGCCGAGA
AAATTAACGTTAAATCAACTGAGCTGGATGCCTTAACTTTTGATTGAGTT
GTATTTTGTTTTTCTTTTGACAGAACTAAGGGTTTTCTTTTGAACAGAGG
AGAGGTATGGGTTTTTCTTTGGACAGAACACTATGATTTGTTTTTCGTTT
GACAGGACAACTATGACTTGTATTTCGTTTGACAGGACAACTATGACTTG
TTTTTCTTTTGACAGGTGACGAGGGTTCAGCATGTTGGATGGTTCTTCAA
ACAATCAAAACAATATACCACGACTCTGATGGTTTTGTTCTTGCACCGCA
CAGTACAGAATTCCTTAAGAAAGAATTATTCGATTATTTTGGTATGACTG
ATCTGTTCGGTATTTTAACACATCTTTATCCGCCGTCTGGGAAAATCGAT
AAAGCTTTTATTGCGCGTTTTTGTGTCAACGGAATCGTAAAAGGTTGTCG
CGCGGGCGATGCTCTTTCGCTTCACGTGATGCGTAATACTGGTATTATGT
TGGGACGCCATGTAAAAGCGCTTATACCTAGAATGGAAAACGCTCTGTTA
CAGGAAAATCAAAATACCGGATTGAAAATTATTTGTGTGGGCTCTGTATG
GAAAAGTTGGGAATTCCTGAAAGATGGATTTCTGGAAGGAATTACACCAG
TTACAGATGAAGAAAAAACTCTGAAAAAGTTTAGTTTGGTGAATTTGAAA
GAAGGTGCAAAAGCTTCTGTAGGGGCAGCCGCTTGGGCATCTAAGAAAAA
TGGGGATGATAACATCTTGAACTTGGATTATAGTAAAACTTCAAATATTT
TCTATCAACATGAATTTTGAGCTGGCATTAGTTGTTTTTTCTTTCATTTG
TAAAATTTTAAAATTTTGTAATTTTTGTCCTTGAACAATAAGCTCTTTAT
AGAGGTAACGAACCTAACTTTCTAGAACTATTATGGAACGCCTAAAAGCT
TTTCTCTATAATCTTTCCTTTTAAACTCATAACTTTCATCTACATTGACA
CACATCGCTTTTGTGAAGTTTTTATATCTTAAGTCAAATTATTTACTCAA
AAATTATATTCTAAGATCCCGAATACTAGGGGGTCCGAAATCTTTTCGGT
ATAATAAATAGGGGGAACCTAATTACCAGGGTGTTGAAATTTTACCTCTA
AAACCCCCTTAATAAGGCAATTATAGACTAAAATGAGGCTCTTTAGAGCA
GTATATTGAATATATATTGAAAATCAAACCCCCGAGTAGAGTAAATTTTA
TAATGATTTTTTCATCATGTTCAATTTTAATTTATTATGACATGCATTTG
TATCTTTAATTTTTCTTACAGACAAATCTATCAATAACTAAATTTTTATG
ATAGGTCTTATTATTCAAATTGTTATCATCATATAATGAGAAGATAATTA
TTATTCCTGAAATTTGAAAAAGGTAAGGCTGAAAGAGTCC

Coding sequence (CDS) from alignment at sc0000273:192553..202692-

>TCONS_00017695 ID=TCONS_00017695|Name=TCONS_00017695|organism=Clytia hemisphaerica|type=CDS|length=5550bp|location=Sequence derived from alignment at sc0000273:192553..202692- (Clytia hemisphaerica)
GTGACGAGGGTTCAGCATGTTGGATGGTTCTTCAAACAATCAAAACAATA
TACCACGACTCTGATGGTTTTGTTCTTGCACCGCACAGTACAGAATTCCT
TAAGAAAGAATTATTCGATTATTTTGGTATGACTGATCTGTTCGGTATTT
TAACACATCTTTATCCGCCGTCTGGGAAAATCGATAAAGCTTTTATTGCG
CGTTTTTGTGTCAACGGAATCGTAAAAGGTTGTCGCGCGGGCGATGCTCT
TTCGCTTCACGTGATGCGTAATACTGGTATTATGTTGGGACGCCATGTAA
AAGCGCTTATACCTAGAATGGAAAACGCTCTGTTACAGGAAAATCAAAAT
ACCGGATTGAAAATTATTTGTGTGGGCTCTGTATGGAAAAGTTGGGAATT
CCTGAAAGATGGATTTCTGGAAGGAATTACACCAGTTACAGATGAAGAAA
AAACTCTGAAAAAGTTTAGTTTGGTGAATTTGAAAGAAGGTGCAAAAGCT
TCTGTAGGGGCAGCCGCTTGGGCATCTAAGAAAAATGGGGATGATAACAT
CTTGAACTTGGATTATAGTAAAACTTCAAATATTTTCTATCAACATGAAT
TTTGAGTTGCATTGCATTGTCACACATGTAATGATACTTTATCACCATTG
GTTACTGCCACTGACGGAGGTGGTGTGGTCATCATTGCAGGGACTGGATC
CAATTGTCTGTTGGTCAATCCTTCAGGTGCTAGCAAGAATTGTGGTGGAT
GGGGTCATTTTATTGGTGTCCCAGAATGCTGTAAGAGGATTGCAGACCTT
GCACAGAAAGCCAAAGTAGCTGCTGGCCTTGGTCCTGAAGTAGTGTTACA
ATCTCTAGGAATGTCACTGAGTGGTGCTGATTACCAGGAGAGAATGGATG
AAATTTCAAAGCACATGTTGGAGAACTTCCCACAGCACAAGAGAACGAAA
TACAAAATGTATTTTGGAGGGTGTGAAGGAGGAGCATCACATTCTTCTGT
TGTCATCACCAATAAAGATGGTGTCATTTTGGGTGAAGCTTCCGGTGAAG
GAACTAATTCATGTTTGATTGNNTGGAGTCTGTTGGACCACTTCAAACAC
AATTCAACTGGTGACGAGGGTTCAGCATGTTGGATGGTTCTTCAAACAAT
CAAAACAATATACCACGACTCTGATGGTTTTGTTCTTGCACCGCACAGTA
CAGAATTCCTTAAGAAAGAATTATTCGATTATTTTGGTATGACTGATCTG
TTCGGTATTTTAACACATCTTTATCCGCCGTCTGGGAAAATCGATAAAGC
TTTTATTGCGCGTTTTTGTGTCAACGGAATCGTAAAAGGTTGTCGCGCGG
GCGATGCTCTTTCGCTTCACGTGATGCGTAATACTGGTATTATGTTGGGA
CGCCATGTAAAAGCGCTTATACCTAGAATGGAAAACGCTCTGTTACAGGA
AAATCAAAATACCGGATTGAAAATTATTTGTGTGGGCTCTGTATGGAAAA
GTTGGGAATTCCTGAAAGATGGATTTCTGGAAGGAATTACACCAGTTACA
GATGAAGAAAAAACTCTGAAAAAGTTTAGTTTGGTGAATTTGAAAGAAGG
TGCAAAAGCTTCTGTAGGGGCAGCCGCTTGGGCATCTAAGAAAAATGGGG
ATGATAACATCTTGAACTTGGATTATAGTAAAACTTCAAATATTTTCTAT
CAACATGAATTTTGAGTTGCATTGCATTGTCACACATGTAATGATACTTT
ATCACCATTGGTTACTGCCACTGACGGAGGTGGTGTGGTCATCATTGCAG
GGACTGGATCCAATTGTCTGTTGGTCAATCCTTCAGGTGCTAGCAAGAAT
TGTGGTGGATGGGGTCATTTTATTGGTGTCCCAGAATGCTGTAAGAGGAT
TGCAGACCTTGCACAGAAAGCCAAAGTAGCTGCTGGCCTTGGTCCTGAAG
TAGTGTTACAATCTCTAGGAATGTCACTGAGTGGTGCTGATTACCAGGAG
AGAATGGATGAAATTTCAAAGCACATGTTGGAGAACTTCCCACAGCACAA
GAGAACGAAATACAAAATGTATTTTGGAGGGTGTGAAGGAGGAGCATCAC
ATTCTTCTGTTGTCATCACCAATAAAGATGGTGTCATTTTGGGTGAAGCT
TCCGGTGAAGGAACTAATTCATGTTTGATTGNNTGGAGTCTGTTGGACCA
CTTCAAACACAATTCAACTGGTGACGAGGGTTCAGCATGTTGGATGGTTC
TTCAAACAATCAAAACAATATACCACGACTCTGATGGTTTTGTTCTTGCA
CCGCACAGTACAGAATTCCTTAAGAAAGAATTATTCGATTATTTTGGTAT
GACTGATCTGTTCGGTATTTTAACACATCTTTATCCGCCGTCTGGGAAAA
TCGATAAAGCTTTTATTGCGCGTTTTTGTGTCAACGGAATCGTAAAAGGT
TGTCGCGCGGGCGATGCTCTTTCGCTTCACGTGATGCGTAATACTGGTAT
TATGTTGGGACGCCATGTAAAAGCGCTTATACCTAGAATGGAAAACGCTC
TGTTACAGGAAAATCAAAATACCGGATTGAAAATTATTTGTGTGGGCTCT
GTATGGAAAAGTTGGGAATTCCTGAAAGATGGATTTCTGGAAGGAATTAC
ACCAGTTACAGATGAAGAAAAAACTCTGAAAAAGTTTAGTTTGGTGAATT
TGAAAGAAGGTGCAAAAGCTTCTGTAGGGGCAGCCGCTTGGGCATCTAAG
AAAAATGGGGATGATAACATCTTGAACTTGGATTATAGTAAAACTTCAAA
TATTTTCTATCAACATGAATTTTGAGTTGCATTGCATTGTCACACATGTA
ATGATACTTTATCACCATTGGTTACTGCCACTGACGGAGGTGGTGTGGTC
ATCATTGCAGGGACTGGATCCAATTGTCTGTTGGTCAATCCTTCAGGTGC
TAGCAAGAATTGTGGTGGATGGGGTCATTTTATTGGTGTCCCAGAATGCT
GTAAGAGGATTGCAGACCTTGCACAGAAAGCCAAAGTAGCTGCTGGCCTT
GGTCCTGAAGTAGTGTTACAATCTCTAGGAATGTCACTGAGTGGTGCTGA
TTACCAGGAGAGAATGGATGAAATTTCAAAGCACATGTTGGAGAACTTCC
CACAGCACAAGAGAACGAAATACAAAATGTATTTTGGAGGGTGTGAAGGA
GGAGCATCACATTCTTCTGTTGTCATCACCAATAAAGATGGTGTCATTTT
GGGTGAAGCTTCCGGTGAAGGAACTAATTCATGTTTGATTGNNTGGAGTC
TGTTGGACCACTTCAAACACAATTCAACTGGTGACGAGGGTTCAGCATGT
TGGATGGTTCTTCAAACAATCAAAACAATATACCACGACTCTGATGGTTT
TGTTCTTGCACCGCACAGTACAGAATTCCTTAAGAAAGAATTATTCGATT
ATTTTGGTATGACTGATCTGTTCGGTATTTTAACACATCTTTATCCGCCG
TCTGGGAAAATCGATAAAGCTTTTATTGCGCGTTTTTGTGTCAACGGAAT
CGTAAAAGGTTGTCGCGCGGGCGATGCTCTTTCGCTTCACGTGATGCGTA
ATACTGGTATTATGTTGGGACGCCATGTAAAAGCGCTTATACCTAGAATG
GAAAACGCTCTGTTACAGGAAAATCAAAATACCGGATTGAAAATTATTTG
TGTGGGCTCTGTATGGAAAAGTTGGGAATTCCTGAAAGATGGATTTCTGG
AAGGAATTACACCAGTTACAGATGAAGAAAAAACTCTGAAAAAGTTTAGT
TTGGTGAATTTGAAAGAAGGTGCAAAAGCTTCTGTAGGGGCAGCCGCTTG
GGCATCTAAGAAAAATGGGGATGATAACATCTTGAACTTGGATTATAGTA
AAACTTCAAATATTTTCTATCAACATGAATTTTGAGTTGCATTGCATTGT
CACACATGTAATGATACTTTATCACCATTGGTTACTGCCACTGACGGAGG
TGGTGTGGTCATCATTGCAGGGACTGGATCCAATTGTCTGTTGGTCAATC
CTTCAGGTGCTAGCAAGAATTGTGGTGGATGGGGTCATTTTATTGGTGTC
CCAGAATGCTGTAAGAGGATTGCAGACCTTGCACAGAAAGCCAAAGTAGC
TGCTGGCCTTGGTCCTGAAGTAGTGTTACAATCTCTAGGAATGTCACTGA
GTGGTGCTGATTACCAGGAGAGAATGGATGAAATTTCAAAGCACATGTTG
GAGAACTTCCCACAGCACAAGAGAACGAAATACAAAATGTATTTTGGAGG
GTGTGAAGGAGGAGCATCACATTCTTCTGTTGTCATCACCAATAAAGATG
GTGTCATTTTGGGTGAAGCTTCCGGTGAAGGAACTAATTCATGTTTGATT
GNNTGGAGTCTGTTGGACCACTTCAAACACAATTCAACTGGTGACGAGGG
TTCAGCATGTTGGATGGTTCTTCAAACAATCAAAACAATATACCACGACT
CTGATGGTTTTGTTCTTGCACCGCACAGTACAGAATTCCTTAAGAAAGAA
TTATTCGATTATTTTGGTATGACTGATCTGTTCGGTATTTTAACACATCT
TTATCCGCCGTCTGGGAAAATCGATAAAGCTTTTATTGCGCGTTTTTGTG
TCAACGGAATCGTAAAAGGTTGTCGCGCGGGCGATGCTCTTTCGCTTCAC
GTGATGCGTAATACTGGTATTATGTTGGGACGCCATGTAAAAGCGCTTAT
ACCTAGAATGGAAAACGCTCTGTTACAGGAAAATCAAAATACCGGATTGA
AAATTATTTGTGTGGGCTCTGTATGGAAAAGTTGGGAATTCCTGAAAGAT
GGATTTCTGGAAGGAATTACACCAGTTACAGATGAAGAAAAAACTCTGAA
AAAGTTTAGTTTGGTGAATTTGAAAGAAGGTGCAAAAGCTTCTGTAGGGG
CAGCCGCTTGGGCATCTAAGAAAAATGGGGATGATAACATCTTGAACTTG
GATTATAGTAAAACTTCAAATATTTTCTATCAACATGAATTTTGAGTTGC
ATTGCATTGTCACACATGTAATGATACTTTATCACCATTGGTTACTGCCA
CTGACGGAGGTGGTGTGGTCATCATTGCAGGGACTGGATCCAATTGTCTG
TTGGTCAATCCTTCAGGTGCTAGCAAGAATTGTGGTGGATGGGGTCATTT
TATTGGTGTCCCAGAATGCTGTAAGAGGATTGCAGACCTTGCACAGAAAG
CCAAAGTAGCTGCTGGCCTTGGTCCTGAAGTAGTGTTACAATCTCTAGGA
ATGTCACTGAGTGGTGCTGATTACCAGGAGAGAATGGATGAAATTTCAAA
GCACATGTTGGAGAACTTCCCACAGCACAAGAGAACGAAATACAAAATGT
ATTTTGGAGGGTGTGAAGGAGGAGCATCACATTCTTCTGTTGTCATCACC
AATAAAGATGGTGTCATTTTGGGTGAAGCTTCCGGTGAAGGAACTAATTC
ATGTTTGATTGNNTGGAGTCTGTTGGACCACTTCAAACACAATTCAACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009896XLOC_009896Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017695-proteinTCONS_00017695-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017695-exon-sc0000273-1575043694:202654..202692TCONS_00017695-exon-sc0000273-1575043694:202654..202692Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1575043694:195563..195698TCONS_00017695-exon-sc0000273-1575043694:195563..195698Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1575043694:194902..195071TCONS_00017695-exon-sc0000273-1575043694:194902..195071Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1575043694:194388..194547TCONS_00017695-exon-sc0000273-1575043694:194388..194547Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1575043694:192553..193777TCONS_00017695-exon-sc0000273-1575043694:192553..193777Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1510915933:202654..202692TCONS_00017695-exon-sc0000273-1510915933:202654..202692Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1510915933:195563..195698TCONS_00017695-exon-sc0000273-1510915933:195563..195698Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1510915933:194902..195071TCONS_00017695-exon-sc0000273-1510915933:194902..195071Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1510915933:194388..194547TCONS_00017695-exon-sc0000273-1510915933:194388..194547Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1510915933:192553..193777TCONS_00017695-exon-sc0000273-1510915933:192553..193777Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1491911889:202654..202692TCONS_00017695-exon-sc0000273-1491911889:202654..202692Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1491911889:195563..195698TCONS_00017695-exon-sc0000273-1491911889:195563..195698Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1491911889:194902..195071TCONS_00017695-exon-sc0000273-1491911889:194902..195071Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1491911889:194388..194547TCONS_00017695-exon-sc0000273-1491911889:194388..194547Clytia hemisphaericaexon
TCONS_00017695-exon-sc0000273-1491911889:192553..193777TCONS_00017695-exon-sc0000273-1491911889:192553..193777Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000273supercontigsc0000273:192553..202692 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.3229	28.4778	9.4284	6.95046	26.6742	24.0114	31.7876	34.953	39.2526	40.0018	46.7434	41.5703	43.4827	48.4115	40.5028	46.8201	25.0046	27.7826	29.7047	26.6211	19.4174	18.6123	38.699	36.4474	22.1884	22.8646	22.6124	23.3816	32.258	32.8658
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002731ATPase_BadF
Blast
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BLAST of TCONS_00017695 vs. Swiss-Prot (Human)
Match: NAGK (N-acetyl-D-glucosamine kinase OS=Homo sapiens GN=NAGK PE=1 SV=4)

HSP 1 Score: 262.307 bits (669), Expect = 2.156e-81
Identity = 140/349 (40.11%), Postives = 201/349 (57.59%), Query Frame = 1 
Query:   67 FGGCEGGASHSSVVITNKDGVILGEASGEGTNSCLIGVPECCKRIADLAQKAKVAAGLGPEVVLQSLGMSLSGADYQERMDEISKHMLENFPQVALHCHTCNDTLSPLVTATDGGGVVIIAGTGSNCLLVNPSGASKNCGGWGHFIGDEGSACWMVLQTIKTIYHDSDGFVLAPHSTEFLKKELFDYFGMTDLFGILTHLYPPSGKIDKAFIARFCVNGIVKGCRAGDALSLHVMRNTGIMLGRHVKALIPRMENALLQENQNTGLKIICVGSVWKSWEFLKDGFLEGITPVTD--EEKTLKKFSLVNLXXXXXXXXXXXXXXXXXNGDDNILNLDYSKTSNIFYQHEF 1107
            +GG EGG + S V++ ++DG IL EA G  TN  LIG  +C +RI ++  +AK  AG+ P V L+SLG+SLSG D ++    + + + + FP ++       D    + TAT  GGVV+I+GTGSNC L+NP G+   CGGWGH +GDEGSA W+  Q +K ++   D    APH   ++K+ +F YF + D  GILTHLY      DK   A FC   I +G + GD LS ++ R  G MLGRH+ A++P ++  L Q     GL I+CVGSVWKSWE LK+GFL  +T   +   +     F+L+ L+  +     +           ++L +DYS  +  FY + F
Sbjct:    5 YGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLISGTGSNCRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYR---DFDKCRFAGFC-RKIAEGAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQ--GKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRHSSALGGASLGARHIG----HLLPMDYSANAIAFYSYTF 343
The following BLAST results are available for this feature:
BLAST of TCONS_00017695 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NAGK2.156e-8140.11N-acetyl-D-glucosamine kinase OS=Homo sapiens GN=N... [more]
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