TCONS_00017737 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00017737
Unique Name	TCONS_00017737
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2573

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000274:243875..254091+
coding sequence from alignment at sc0000274:243875..254091+

transcript sequence

>TCONS_00017737 ID=TCONS_00017737|Name=TCONS_00017737|organism=Clytia hemisphaerica|type=transcript|length=2573bp
TTATTTGCGATCTACATTCCAAGAGTCTCACTTATTCACGATTTCTCTAT
CGTTTCAGACATTTATTGGTGGCCGACAAACGTCAACGAGAAAGGAACAT
CAAAGTAAATCGCACGCAGAAGAAATATTGTTGAAAAACTTATTAAAACA
TATTAAAAGAGTAAATGATTACATTGGAAACGctggtcatcaaaattttt
tgattgctGGAAGCAGGTTTACTGGTTTGGAAAGTACAGTATTTCGATAA
TATATACAAGAGACTACCTTTAGAAACTGATATTTCAAGATGTGTTCAAG
GAATTTCTTTATCCTGGCATCATGCATATTTTTGTCTATGGTTCATCAAA
TGTCATCGGTTGAAGTTGATGCTACGAGCAATGAGATCGATTTACGTCCG
CAATGCAAAGATTCACACGATTTATATTACGCCAATTGTTTTAACTTAAA
GCGAGCAAAACTTTGTGACTtggagaaaaataaaatgagaTTTTACTGTC
CCCTCACTTGTCGCCAGTGTAaagGACCAATCGATGAGAATAGGGTGAGT
AGGCCGCCTGTTGCTAAGTGTTTGTCTTCACGGTTCGGATGTTGCAACGA
TAACGAAACAGCTGCTCAAGGAAAAGACTTTCTCGGGTGCCCAGAACGAT
GTTTTGACACACCAAACTACAGTTGTGATTTCTTCCGGAAAATCGGATTC
TGTAACTTGGGATACTACAAAGAACAGATGTTATTGAGATGTCCTTTATC
ATGCAACTACTGTAAAAATGAGATCAAAGTGAACAAATGCCGTAATCGCT
GGGACGACGTGACATGCGAGCGTGCTGCCAAACACGGTTACTGTACGGTA
TTGAAATACGAGAAACGACTCACGAAGAATTGTCGTAAATCTTGCGACAA
GTGTAAACGAAGCACAGCACCCGCTTTGCTATCGGTCGCTCGTGAATGTT
CGCATGAAGGAAATTGTTGTTGGGATCGCTCGAAACCTTTCAATGGTCGA
TGCCCAgACTGTGCTGATCGTTATTCGAaatcattttgcaaaatttttga
ccttgATTGTAAAGATACCAGTGGGATCAAGGGAGTTCAAATTCGAGTCA
TTTGTGCTCAAACTTGTGGCCTCTGTTCTGTTCCAAAGGAATGCATGGAC
GATTTGATTTACGGAGAATTCTGCAACTCATGGAAGGAGCGTGGACAATG
TTCAAAACAACCGCTCATCATGAAAACATACTGTAAGAAAACATGTGGTT
TCTGCAACGACAgtagcaacaacaacaacaacaacaacaacaacaacgac
aacaacaacaacaacaacaacaacaacaacaacaacaacaacaatgtTTC
TAAAAAAACATAAATGGAATCATCACACATGAGGatgaagataatttttt
taaatggtaaCTCTAAATTGACTAGTGAAGTAAAACTGACAAGCGAAGTG
AATCGCGGATACAGCATgacccaacctcgttccctgtgtatcatcagctt
tttttatgtttactgatatcgctagataataccctggcattgtctgGTTA
TCGAATGCGAAAGATTATGTAATTcgaaaacaaaacgtcagatttcattt
gtaGCTGGATTTGAAACCCCACTGCATTGTGGTATAACTTagtaacgtca
gattttttatGACGCATTGTTTTGAGAAATCCCCCCTCTGAGAGCGggac
tcgcatcagccaacaccagttctctggcgtctatcagtaatgtaaataaa
gcctgaaaTACACGGTGGCGAGGATGCATCATGACCGTTTAATCGCCCTG
GAAACTCCGTATATCGCTGATATTGGAATGACATTTTAGAGACAAAATAA
CTTAACTATACTATAAACGAAAAACTCAAAAACGGGAAAAGAGGTTATCG
AGATCTTAGAAGTTTTCGCTAAATGAAGACCTCGAATTTTGGAACGAAAA
GGTTTTGCGTTCACCTCATTATTACTAACTATTTCTAACTTTTATAAATT
TGTCACTTTTCTAGTGATCAAAGGTAATTTCTGTGTAAATTAttccacaa
ttttttttatatttaacgCAAGACATATTCCTAAACGATTTACCCCTCCG
AAGGAGAAACCATGGTTAGAACGCCATTATGTTTGATTGATCTTCTGCAA
TACAGAGGCAAGACATAACTTCTTATCCCACGAAGGTGAAAGTCTTCTCC
GTTGAGATTTCGTTCATTGATCAAGTAGGTGATTTAACCGATTTAACTTA
TTCTAATTTTGCCTAACATTTCTATATTTTCATAAttcatcaaaaaaagt
ttttttttaaatccattttttgtTGTCAGGTTTCTTATTTATGATGTAAA
TATATTAGTGTAAATAAAACTCCCCTCCTTTCTCCATCCTTTTACAATAG
ATATCTAGATTTATTACAAGGCTTCATAGCCCAGGATCCACTTAAGGCTT
ATTTGTATAGACTGCATGGCGTGTTGAGTGGCTTGTAGTACATAAAGGTA
atcccacagatatctgtaaagcccgaagggctagatttgcggcttttatc
gaaaagtgaagcctaggtttgga

Run BLAST on NCBI

protein sequence of TCONS_00017737-protein

>TCONS_00017737-protein ID=TCONS_00017737-protein|Name=TCONS_00017737-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
MCSRNFFILASCIFLSMVHQMSSVEVDATSNEIDLRPQCKDSHDLYYANC
FNLKRAKLCDLEKNKMRFYCPLTCRQCKGPIDENRVSRPPVAKCLSSRFG
CCNDNETAAQGKDFLGCPERCFDTPNYSCDFFRKIGFCNLGYYKEQMLLR
CPLSCNYCKNEIKVNKCRNRWDDVTCERAAKHGYCTVLKYEKRLTKNCRK
SCDKCKRSTAPALLSVARECSHEGNCCWDRSKPFNGRCPDCADRYSKSFC
KIFDLDCKDTSGIKGVQIRVICAQTCGLCSVPKECMDDLIYGEFCNSWKE
RGQCSKQPLIMKTYCKKTCGFCNDSSNNNNNNNNNNDNNNNNNNNNNNNN
NNVSKKT

Run BLAST on NCBI

transcript from alignment at sc0000274:243875..254091+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00017737 ID=TCONS_00017737|Name=TCONS_00017737|organism=Clytia hemisphaerica|type=transcript|length=10217bp|location=Sequence derived from alignment at sc0000274:243875..254091+ (Clytia hemisphaerica)
TTATTTGCGATCTACATTCCAAGAGTCTCACTTATTCACGATTTCTCTAT
CGTTTCAGACATTTATTGGTGGCCGACAAACGTCAACGAGAAAGGAACAT
CAAAGTAAATCGCACGCAGAAGAAATATTGTTGAAAAACTTATTAAAACA
TATTAAAAGAGTAAATGATTACATTGGAAACGctggtcatcaaaattttt
tgattgctGGAAGCAGGTTTACTGGTTTGGAAAGTACAGTATTTCGATAA
TATATACAAGAGACTACCTTTAGAAACTGATATTTCAAGATGTGTTCAAG
GAATTTCTTTATCCTGGCATCATGCATATTTTTGTCTATGGTTCATCAAA
TGTCATCGGTTGAAGTTGATGCTACGAGCAATGGTAAGAAGATATTCTTG
ATTTTCGGGACTGGGACCTAGGGGGTCTGCGCTAAAATAggttgtattca
tgatatgtaccaCTGGAGAGCTTTCCaagaattttataaaatttcctccc
aatacgtcacttaaaaattaggaaaagtgacgtattgggtggtacatttt
aaaagttctcagaagactctccggtgatgcatatcatgaataaagacCTT
TTTTTAACCATAACATTCAATTTCCAGGGTTTAGGGGCAATAAGCGTCTT
CCATCCATCCCTTCATGATGTAAATTTTGTCAAGAAATTCTTTATAAAAG
CTGGAGGTTTGATAggctggagtcgtttataatgcgtgtaatacattagt
ataggcgttatatacgggatttgatttataaaattgttccctcccaTTAC
TTTTTggtttatttctactatgtttgaatttttcgtctagcttgctagac
tagcgGTTTAAAAGAAACGCACTATGAGGGCGATAAGAAAAACTGTCCTT
TGAGTGGCGGAAAGAAAGAATTTTACTTTGGGCAGCAGTACACTGTCAAT
TTTCGCATGAAACGATCTCGAAGAAAAACCGCAACACCACAAGCcactaa
aaagtaaataaataggTTGTTGGAATGTTAATGAGAGTTGACCGCCGAAA
TTAAATGGAATTTCCGTTAAGTGGTAAAGATCTCTGAATGTCGGCAGGCT
TAATATGGTTTTGTCTACTGGATGGAAATAATCGATACATGTGCCACTAA
TTGTAATGAAATTCTCAAGTGTGTTGGCTCGTGTTCCATTCATTTCTGTT
CCCCCACAGATACCTTACGTCGTTTTATGGTTTTTCTTAGTCTAGCGAGc
aagacgactaattcagacatagtataaataaagcaaaaaataatggaggg
aacaaattttagtctATACTAATTATAAAttccgtaacaataatcgtatt
atcatataacgcctatactactgtattacacgcattataaacgactccag
tctaggttTTTCTTAGagcgtttttcaaacttttagaattaaaaatttct
gaaatccTCAGTTTTCAATGCTCTGAGAATACACGAGAATCTACATTTAA
TACCTCCTCCTCTAGgcagttttgaaatttttggtgttCACGTTTTTCAC
AAGAGCATTTAAAATCTTTAAGCCCTCAGATGTTTTtattaaagtgttct
taacttgttcttatgtttaccattttttagtatttttgaacgatttccta
agaaatcgggtttttagagttcgcaaagccttaaaatgttcttaacatat
tctcgatattttggtcatcgaagccttgtgttcttttatagtttattcct
ataaaaaatattcccaaGTTACATCGATGAATTTCAGTGTCTCCTTGAAA
TCCAAGTTTGATGTAGACTGGAGTGGTTTGAAATGCgcgtaatacagtag
tataggcgttatatgataatacgattattgttacgggatttagtttgtat
aaactaaaactaaaaattgttccctccattactttctGCTtcatttctac
tatgtctgaattagtcgtctagcttgctagactaagtTTGATGAATCTAG
GGAGATGACGTTTATGTTTCTAAAATAGGAACGAAAAAGCGCTCTAACTC
GTACTTATATTCATGTACAATTGTGGTTACGTTGATGTTTTACGTATTTG
TATGTCGCACGCACAGCAGTTAGACGTGAGGCATATTGTGTTCTTTTCTG
ATTTAAGATTATAATTCTATTAGTGACTAAACAGTGGAATTAACTCTTGA
CAGCTTTCCTTTATCCTTCGTCAATCAAAGAAGAGTATTTACGCctgatt
tgattaaaaaattttaatcaaacGTTTAAAGCCGTAAGTAAAGGGGACAT
TTAGTTAAGATTTCAAGAATTTCAGCCCTTTTAGTTCCCGGTTGTGCTTA
AGTCTAATAGAAAAGTCTGGTAAAAaccagagttaaaactctaccattcT
AACCTAAGTGAGAGCTTTTCCGTATCGTTTGTGTCCCTataaaatttcgt
gggaaattcccttttttctcaaatattatgaccttaattgtggatttttg
gcccagcgtgaaagtcatttaaaaaaagatgcTGTTCAAAAATCTGGCAT
GCCACTATCTAACTTGTTCCTCctgactacacgttttttttataagaata
tccaagaTTCATGAAGCTtttcaatgttcttaaatttttgagttttaagc
ctaaaaatgttcttaacatgttcttattttcgccattttgtgagcatttt
tgtccattttcttaagaaattggtcattttagagtctgcaaaatcttgaa
attttcttaacatattcttgaTAATTTGGTCAttattgaagccttatgtt
cttttatcgtttgttcttattaaaaaaaacgtgtactgtctTTCTTTCAA
TGTGTTCAAAATTGTATCCGTGAGAACGTTGCATTCAACAGTatatctaa
aattatacaagGGACTCATAAGTCCTCAAAAATTATAGCCATGGACtaaa
aaaatagaagccttGCTTAAATCAGACTCCTACGCGCATTTCATACTCGA
CTGCTTGACTGCATTGTTGATCCTTTCTGTTTATCCGCTCTTAATCTGGT
ACCATTACCAAGGTTATCAAAAGACAAACTTTCATCTTTTGTATTGCTTT
TAGATCAAATTATTAAACATACGGTTCTatttaaatgatattttttgaac
TCCTTACTGGGTTATTGAATGATGTGTTATTCTAACGACTGAATGGACCA
TTTTGTGAGTCAAATATagtcttttgattgactttTGTTTACAGTGGTAG
CTCAACGTTGTTTGTGTCTGAGTAATGACAAGTATATATTTGCCATTATT
TGAAATTATCTAAATTGTCTAGAATAAATGAAATATTGAGTCTAAGCCTG
ACAAGATGAATTATGTTCAATAtaatcttatcttatcttatcctATCGAA
AAGATTCCCCATTAGCCTTTGATCAGGGCTTATCAATGTCTAGCATGAAC
TTTTTAAAACGATTTGTGGCCCATAAATCACTATTTATGTGCTCCTACAC
ATCTTTTTATAAGgacaaaccatataagaacataaggcttcgatggtcaa
aatgttaagaacaagctaagaacattttaagtctttgcggactctaaaac
acccgatttcttaggaaaagggctaaaatgctcaaaaaatggtgaacata
agaacatgttaagaacattcttagaCTTAATACTCAAAAGATCAAGAACg
tcctaaggcttcaaaaattttggagtTCTTATATGTatatgaaagatatt
ttattttAGACAAGCCCCCTTTTAACTGCTTTAATGACCAATCACAATTA
AATTAGACTGCTGAATCATTGGAGAGGAGGCAGTTTCGAAGTTATTTATA
TAATGTCTAATTTacgcgttttttttatataagaacatccaaaaattttg
aaaccttcggatcTTCTTAActctttgaattttaagcctaaaaatgttct
taatatgttcttattttcaccattttatgagcatttttgcctattttcct
aagaaatcaggtgttttagagttcgcaaagccttaaaatgttcttaacat
gttcttaagattttggccatcgaagccttatgttcttatatagtttgttc
ttataaaaaaagcgtgtatttcaatcctgataaaatcaatttttcacaTG
AACAAAATTGAATGCAAATCTAAATTAGGAAGCGCACCAATTATCTCTAG
ACACAATCTTTTAATCATTAGACTGTAAACAACGAGTCGCGTCAAAAAGG
GGTCATCGCACAGTCTATTTTTGTTGATGAGTCAAAGCCTAGCTGTGCCC
TTTTTATGTATGCTTCTCTTTTTGCGATAAGATAAATTGAATAGATTTCA
AAATAGCTCCACCTTCCTTGTTACCTTAGCAATTCGAATCTCAATTAAGA
CGTGTTGAGCACAGCGCCCTACAAACGACGACCTCTTTTTAGTTTCTTGG
TGTACACTTATCGTATTTGGAAAGTTTTATTTCTCAGGAGAAGTGAATAG
AATTGCGAAACTTGATTAAACAATTTTTACACTTTTAACCCCAGCTTGGG
TCATAaatattagaaaagaaataacaaaCGACCTTGAcctttaaaatgat
tttgatatttttgccatcaaagccttatgttcttatatagtttgctcttg
taaaaaagaaattgctgCACTCGTTTTCAGCAAGATAATCCTTAAAGACA
ATTAAACAGTTTTGGATAATTGAAATATTTCAGGACTGAACTGATGCCAA
AATTActtaaTGATATTtagaaacaaatttttaattgattcctcatacac
gcttttttttttataagaatggtgtaaatccatttcatcatggatattct
taacttttttgggaaaatcatcctaaaatattcttacagcactNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNtattcttaattttttggccattttcatcatgga
cattcttataaagtgtattcttataaaaaaaaaagcgtgtaacctGATTC
CTAAAATTTGTTTACCTAAAACTCATTTTTTGACCAAACAATCTTTTTTA
CTTCAATCTATTATCTTGGAGTTGGACTTTCTATTTTGAAAGCATCTATA
GATATTTTGAGAGGAGAAACATGGCTAGAGATTGAGCAATGGCTAATTTT
GACCTAGGCCCCTTTGGGCTTTGAAGGCTCGAATAATCATTATCATTATC
ACCACATCTTTCTTTACAGAGATCGATTTACGTCCGCAATGCAAAGATTC
ACACGATTTATATTACGCCAATTGTTTTAACTTAAAGCGAGCAAAACTTT
GTGACTtggagaaaaataaaatgagaTTTTACTGTCCCCTCACTTGTCGC
CAGTGTAaaggtaagatttttttttaattttcagctgaggggaccaacca
atattttagttcgatttacagaaagattcgaataatagaggttcgaatta
tagagaattGACTGTAATACTTTCAAGGGACGGCGTAAAGATGGTAGGTA
CATATGTGATTAACTTGACCAAAAACATGAGTAGAGAAAACACAAAACAC
ACAgaattcgtgatattcatgacgtaatgtttcatACGGAAGCACCCCNA
ACACACAGAGTTCATGATATTCATGGCGTAATGTTtcatacggaagcacc
caaaaataGCCCGAGCGTTTGcctctacacgctttttttataagaatggt
gtaaatccatttcatcatgaacattcttagcttttttgggaaaatcatcc
taaaatattcttacagcacattcttaggttaggatcctaattcatactaa
cttggggataattgataattgaaaatgctcttaaaatggcattcttagct
ttagtagcaaaattccacgatggtgatattcttaccatattcttagtttt
ttggtcaatttcatcatggacattcctataaagtgtattcttataaaaaa
aaagcgtgtagttagattgtttaaattcaaaattagtaaTAAAAGCCCTG
TTTTTTTGGGGTTCCCctcgtataaaacattacgtcataaacatCATGAA
TTTTAAAGTTATGTATTTCTATCTTCTATAGGACCAATCGATGAGAATAG
GGTGAGTAGGCCGCCTGTTGCTAAGTGTTTGTCTTCACGGTTCGGATGTT
GCAACGATAACGAAACAGCTGCTCAAGGAAAAGACTTTCTCGGGTGCCCA
GGTACGTAGGCTTccatatttccaaaaatttccaaattctgATAAATTAT
CCACATACTTTTCCACAAGgtacttttaaattttgaaatgtgaGGATTAA
ATAGTCGAATTAATCTCATTTTCATACTgagtttttctattttgattgaA
TAAACATTAATACTACTTGTAAAAAATGGTATATTTCATTTCCTGGGTTT
GCATCGAATGTTTGTCCTCCTacttaaaaaaagaataaagagTTGCCTTA
AAAATTGACGGAATCTTCGACGTCATTAGAGGTTTAGGCACTACAAGACT
TTTACCGTGAAAAATCTATATATATAATACATTTTCGAATCATTACAGAA
CGATGTTTTGACACACCAAACTACAGTTGTGATTTCTTCCGGAAAATCGG
ATTCTGTAACTTGGGATACTACAAAGAACAGATGTTATTGAGATGTCCTT
TATCATGCAACTACTGTAAAAATGAGATCAAAGTGAACAAATGCCGTAAT
CGCTGGGACGACGTGACATGCGAGCGTGCTGCCAAACACGGTTACTGTAC
GGTATTGAAATACGAGAAACGACTCACGAAGAATTGTCGTAAATCTTGCG
ACAAGTGTAAACGAAGCACAGCACCCGCTTTGCTATCGGTCGCTCGTGAA
TGTTCGCATGAAGGAAATTGTTGTTGGGATCGCTCGAAACCTTTCAATGG
TCGATGCCCAggtaaagaaaaaacatttgagTATAAAGTAGAGGTTTTCA
GGTTTTACCAAAGTGACGTAACTTAGTTTTAAGGTGTTTGCCAACGTTTC
GTAACTTAAGGAAAATCCACAAATATGGAAACAAGCATTCGAATTTTTAG
AGGCGACTTTTTACGCAAATATCTCATGTTGAGAGAATTCTCTTGGATAA
ATAAGCCCGGGGAGGGGCCaccaaaaaatggctttcaatattggatcctt
acagtgcagcccttGAGTATTTAAAagatacccttacagtgcattttacc
gaacgaTTCTGACCCTTATAGTgaagtttgatttcatatcttattttgcc
gAAGCCGCCTGGAAATAAGCCTAAGATGTCGACCATATGTCGGACCATAT
CAGTGCCCCTCCCCCCCTGGGTACATAAAGCAACATGATACCACCTATAA
AGATCTATCGCTATATCATGGCTGAGTATTTTGGAATTTGTGGATATGAT
GTATCAGTCGTGCTTTCAAAGCTATATTCAAATACCATTGTATGTTTCTT
CCATTTTTAGACTGTGCTGATCGTTATTCGAaatcattttgcaaaatttt
tgaccttgATTGTAAAGATACCAGTGGGATCAAGGGAGTTCAAATTCGAG
TCATTTGTGCTCAAACTTGTGGCCTCTGTTCTGGTAAGATGCCATTTGTG
TTACTtctattacacccctgtctcatatcGCCGATACAacttttcccaca
gtggggataaaattttctattgaaaacccaatggggataaaaattctatc
gttCCTAAGTCGAATCCGgtggagatggttttggagtgcaattttttaca
ttgaattttgaatgtggatgaaatcaaagtcaattccccagtggggctgg
ggtcccagcgggtctgtgacacatgggTGTTCTATTGATTTGAAACTTCA
AAGCAGATGTTCTATGTTAGCTCTTCTAAAGTTAAATCATAGGGATTTTC
GAATGATACGCTTATATTTTGTTCACATCAAAAAACACCTCTGTCTCACT
CACAGCCTTAGAAATTTTCCCCAGAGAGGGTATAAAAAGTTCTatcgaaa
ttccaatggggataagAATTCTATTGTCCCAAGCTGTGCAATTATTTTAT
ATCGACTTTTAAATGGGGATGAGATAAAATTCAATTTCCCGTTCgggctg
aaattttagggtatttttcccaccggggacagaATCTTGGACAaaatttc
cagtggggctgggaccctagcgggtctgtgacacaggggtttaAAAAAGA
TTGCGATTTCAGCGTTGGCGAGAGGATCGCATCTATAATCTACAatcatg
gaaaaaaattataagaaaaaacaattccCAACTATTTATCCCCTTCCTCC
CATTTGCTGCGACTGCAGTGCACACTGAACAAAATACAGCGCACAATTGT
TAGGGGAAACGGGGGTAtatttctcaaatatttctatCCATGGTtacagt
caatttttttttcgatttccacAGTTCCAAAGGAATGCATGGACGATTTG
ATTTACGGAGAATTCTGCAACTCATGGAAGGAGCGTGGACAATGTTCAAA
ACAACCGCTCATCATGAAAACATACTGTAAGAAAACATGTGGTTTCTGCA
ACGACAgtagcaacaacaacaacaacaacaacaacaacaacgacaacaac
aacaacaacaacaacaacaacaacaacaacaacaacaatgtTTCTAAAAA
AACATAAATGGAATCATCACACATGAGGatgaagataatttttttaaatg
gtaaCTCTAAATTGACTAGTGAAGTAAAACTGACAAGCGAAGTGAATCGC
GGATACAGCATgacccaacctcgttccctgtgtatcatcagcttttttta
tgtttactgatatcgctagataataccctggcattgtctgGTTATCGAAT
GCGAAAGATTATGTAATTcgaaaacaaaacgtcagatttcatttgtaGCT
GGATTTGAAACCCCACTGCATTGTGGTATAACTTagtaacgtcagatttt
ttatGACGCATTGTTTTGAGAAATCCCCCCTCTGAGAGCGggactcgcat
cagccaacaccagttctctggcgtctatcagtaatgtaaataaagcctga
aaTACACGGTGGCGAGGATGCATCATGACCGTTTAATCGCCCTGGAAACT
CCGTATATCGCTGATATTGGAATGACATTTTAGAGACAAAATAACTTAAC
TATACTATAAACGAAAAACTCAAAAACGGGAAAAGAGGTTATCGAGATCT
TAGAAGTTTTCGCTAAATGAAGACCTCGAATTTTGGAACGAAAAGGTTTT
GCGTTCACCTCATTATTACTAACTATTTCTAACTTTTATAAATTTGTCAC
TTTTCTAGTGATCAAAGGTAATTTCTGTGTAAATTAttccacaatttttt
ttatatttaacgCAAGACATATTCCTAAACGATTTACCCCTCCGAAGGAG
AAACCATGGTTAGAACGCCATTATGTTTGATTGATCTTCTGCAATACAGA
GGCAAGACATAACTTCTTATCCCACGAAGGTGAAAGTCTTCTCCGTTGAG
ATTTCGTTCATTGATCAAGTAGGTGATTTAACCGATTTAACTTATTCTAA
TTTTGCCTAACATTTCTATATTTTCATAAttcatcaaaaaaagttttttt
ttaaatccattttttgtTGTCAGGTTTCTTATTTATGATGTAAATATATT
AGTGTAAATAAAACTCCCCTCCTTTCTCCATCCTTTTACAATAGATATCT
AGATTTATTACAAGGCTTCATAGCCCAGGATCCACTTAAGGCTTATTTGT
ATAGACTGCATGGCGTGTTGAGTGGCTTGTAGTACATAAAGGTAatccca
cagatatctgtaaagcccgaagggctagatttgcggcttttatcgaaaag
tgaagcctaggtttgga

Coding sequence (CDS) from alignment at sc0000274:243875..254091+

>TCONS_00017737 ID=TCONS_00017737|Name=TCONS_00017737|organism=Clytia hemisphaerica|type=CDS|length=6444bp|location=Sequence derived from alignment at sc0000274:243875..254091+ (Clytia hemisphaerica)
ATGTGTTCAAGGAATTTCTTTATCCTGGCATCATGCATATTTTTGTCTAT
GGTTCATCAAATGTCATCGGTTGAAGTTGATGCTACGAGCAATGAGATCG
ATTTACGTCCGCAATGCAAAGATTCACACGATTTATATTACGCCAATTGT
TTTAACTTAAAGCGAGCAAAACTTTGTGACTtggagaaaaataaaatgag
aTTTTACTGTCCCCTCACTTGTCGCCAGTGTAaagGACCAATCGATGAGA
ATAGGGTGAGTAGGCCGCCTGTTGCTAAGTGTTTGTCTTCACGGTTCGGA
TGTTGCAACGATAACGAAACAGCTGCTCAAGGAAAAGACTTTCTCGGGTG
CCCAGAACGATGTTTTGACACACCAAACTACAGTTGTGATTTCTTCCGGA
AAATCGGATTCTGTAACTTGGGATACTACAAAGAACAGATGTTATTGAGA
TGTCCTTTATCATGCAACTACTGTAAAAATGAGATCAAAGTGAACAAATG
CCGTAATCGCTGGGACGACGTGACATGCGAGCGTGCTGCCAAACACGGTT
ACTGTACGGTATTGAAATACGAGAAACGACTCACGAAGAATTGTCGTAAA
TCTTGCGACAAGTGTAAACGAAGCACAGCACCCGCTTTGCTATCGGTCGC
TCGTGAATGTTCGCATGAAGGAAATTGTTGTTGGGATCGCTCGAAACCTT
TCAATGGTCGATGCCCAgACTGTGCTGATCGTTATTCGAaatcattttgc
aaaatttttgaccttgATTGTAAAGATACCAGTGGGATCAAGGGAGTTCA
AATTCGAGTCATTTGTGCTCAAACTTGTGGCCTCTGTTCTGTTCCAAAGG
AATGCATGGACGATTTGATTTACGGAGAATTCTGCAACTCATGGAAGGAG
CGTGGACAATGTTCAAAACAACCGCTCATCATGAAAACATACTGTAAGAA
AACATGTGGTTTCTGCAACGACAgtagcaacaacaacaacaacaacaaca
acaacaacgacaacaacaacaacaacaacaacaacaacaacaacaacaac
aacaatgtTTCTAAAAAAACATAAATGTGTTCAAGGAATTTCTTTATCCT
GGCATCATGCATATTTTTGTCTATGGTTCATCAAATGTCATCGGTTGAAG
TTGATGCTACGAGCAATGAGATCGATTTACGTCCGCAATGCAAAGATTCA
CACGATTTATATTACGCCAATTGTTTTAACTTAAAGCGAGCAAAACTTTG
TGACTtggagaaaaataaaatgagaTTTTACTGTCCCCTCACTTGTCGCC
AGTGTAaagGACCAATCGATGAGAATAGGGTGAGTAGGCCGCCTGTTGCT
AAGTGTTTGTCTTCACGGTTCGGATGTTGCAACGATAACGAAACAGCTGC
TCAAGGAAAAGACTTTCTCGGGTGCCCAGAACGATGTTTTGACACACCAA
ACTACAGTTGTGATTTCTTCCGGAAAATCGGATTCTGTAACTTGGGATAC
TACAAAGAACAGATGTTATTGAGATGTCCTTTATCATGCAACTACTGTAA
AAATGAGATCAAAGTGAACAAATGCCGTAATCGCTGGGACGACGTGACAT
GCGAGCGTGCTGCCAAACACGGTTACTGTACGGTATTGAAATACGAGAAA
CGACTCACGAAGAATTGTCGTAAATCTTGCGACAAGTGTAAACGAAGCAC
AGCACCCGCTTTGCTATCGGTCGCTCGTGAATGTTCGCATGAAGGAAATT
GTTGTTGGGATCGCTCGAAACCTTTCAATGGTCGATGCCCAgACTGTGCT
GATCGTTATTCGAaatcattttgcaaaatttttgaccttgATTGTAAAGA
TACCAGTGGGATCAAGGGAGTTCAAATTCGAGTCATTTGTGCTCAAACTT
GTGGCCTCTGTTCTGTTCCAAAGGAATGCATGGACGATTTGATTTACGGA
GAATTCTGCAACTCATGGAAGGAGCGTGGACAATGTTCAAAACAACCGCT
CATCATGAAAACATACTGTAAGAAAACATGTGGTTTCTGCAACGACAgta
gcaacaacaacaacaacaacaacaacaacaacgacaacaacaacaacaac
aacaacaacaacaacaacaacaacaacaatgtTTCTAAAAAAACATAAAT
GTGTTCAAGGAATTTCTTTATCCTGGCATCATGCATATTTTTGTCTATGG
TTCATCAAATGTCATCGGTTGAAGTTGATGCTACGAGCAATGAGATCGAT
TTACGTCCGCAATGCAAAGATTCACACGATTTATATTACGCCAATTGTTT
TAACTTAAAGCGAGCAAAACTTTGTGACTtggagaaaaataaaatgagaT
TTTACTGTCCCCTCACTTGTCGCCAGTGTAaagGACCAATCGATGAGAAT
AGGGTGAGTAGGCCGCCTGTTGCTAAGTGTTTGTCTTCACGGTTCGGATG
TTGCAACGATAACGAAACAGCTGCTCAAGGAAAAGACTTTCTCGGGTGCC
CAGAACGATGTTTTGACACACCAAACTACAGTTGTGATTTCTTCCGGAAA
ATCGGATTCTGTAACTTGGGATACTACAAAGAACAGATGTTATTGAGATG
TCCTTTATCATGCAACTACTGTAAAAATGAGATCAAAGTGAACAAATGCC
GTAATCGCTGGGACGACGTGACATGCGAGCGTGCTGCCAAACACGGTTAC
TGTACGGTATTGAAATACGAGAAACGACTCACGAAGAATTGTCGTAAATC
TTGCGACAAGTGTAAACGAAGCACAGCACCCGCTTTGCTATCGGTCGCTC
GTGAATGTTCGCATGAAGGAAATTGTTGTTGGGATCGCTCGAAACCTTTC
AATGGTCGATGCCCAgACTGTGCTGATCGTTATTCGAaatcattttgcaa
aatttttgaccttgATTGTAAAGATACCAGTGGGATCAAGGGAGTTCAAA
TTCGAGTCATTTGTGCTCAAACTTGTGGCCTCTGTTCTGTTCCAAAGGAA
TGCATGGACGATTTGATTTACGGAGAATTCTGCAACTCATGGAAGGAGCG
TGGACAATGTTCAAAACAACCGCTCATCATGAAAACATACTGTAAGAAAA
CATGTGGTTTCTGCAACGACAgtagcaacaacaacaacaacaacaacaac
aacaacgacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caatgtTTCTAAAAAAACATAAATGTGTTCAAGGAATTTCTTTATCCTGG
CATCATGCATATTTTTGTCTATGGTTCATCAAATGTCATCGGTTGAAGTT
GATGCTACGAGCAATGAGATCGATTTACGTCCGCAATGCAAAGATTCACA
CGATTTATATTACGCCAATTGTTTTAACTTAAAGCGAGCAAAACTTTGTG
ACTtggagaaaaataaaatgagaTTTTACTGTCCCCTCACTTGTCGCCAG
TGTAaagGACCAATCGATGAGAATAGGGTGAGTAGGCCGCCTGTTGCTAA
GTGTTTGTCTTCACGGTTCGGATGTTGCAACGATAACGAAACAGCTGCTC
AAGGAAAAGACTTTCTCGGGTGCCCAGAACGATGTTTTGACACACCAAAC
TACAGTTGTGATTTCTTCCGGAAAATCGGATTCTGTAACTTGGGATACTA
CAAAGAACAGATGTTATTGAGATGTCCTTTATCATGCAACTACTGTAAAA
ATGAGATCAAAGTGAACAAATGCCGTAATCGCTGGGACGACGTGACATGC
GAGCGTGCTGCCAAACACGGTTACTGTACGGTATTGAAATACGAGAAACG
ACTCACGAAGAATTGTCGTAAATCTTGCGACAAGTGTAAACGAAGCACAG
CACCCGCTTTGCTATCGGTCGCTCGTGAATGTTCGCATGAAGGAAATTGT
TGTTGGGATCGCTCGAAACCTTTCAATGGTCGATGCCCAgACTGTGCTGA
TCGTTATTCGAaatcattttgcaaaatttttgaccttgATTGTAAAGATA
CCAGTGGGATCAAGGGAGTTCAAATTCGAGTCATTTGTGCTCAAACTTGT
GGCCTCTGTTCTGTTCCAAAGGAATGCATGGACGATTTGATTTACGGAGA
ATTCTGCAACTCATGGAAGGAGCGTGGACAATGTTCAAAACAACCGCTCA
TCATGAAAACATACTGTAAGAAAACATGTGGTTTCTGCAACGACAgtagc
aacaacaacaacaacaacaacaacaacaacgacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaatgtTTCTAAAAAAACATAAATGT
GTTCAAGGAATTTCTTTATCCTGGCATCATGCATATTTTTGTCTATGGTT
CATCAAATGTCATCGGTTGAAGTTGATGCTACGAGCAATGAGATCGATTT
ACGTCCGCAATGCAAAGATTCACACGATTTATATTACGCCAATTGTTTTA
ACTTAAAGCGAGCAAAACTTTGTGACTtggagaaaaataaaatgagaTTT
TACTGTCCCCTCACTTGTCGCCAGTGTAaagGACCAATCGATGAGAATAG
GGTGAGTAGGCCGCCTGTTGCTAAGTGTTTGTCTTCACGGTTCGGATGTT
GCAACGATAACGAAACAGCTGCTCAAGGAAAAGACTTTCTCGGGTGCCCA
GAACGATGTTTTGACACACCAAACTACAGTTGTGATTTCTTCCGGAAAAT
CGGATTCTGTAACTTGGGATACTACAAAGAACAGATGTTATTGAGATGTC
CTTTATCATGCAACTACTGTAAAAATGAGATCAAAGTGAACAAATGCCGT
AATCGCTGGGACGACGTGACATGCGAGCGTGCTGCCAAACACGGTTACTG
TACGGTATTGAAATACGAGAAACGACTCACGAAGAATTGTCGTAAATCTT
GCGACAAGTGTAAACGAAGCACAGCACCCGCTTTGCTATCGGTCGCTCGT
GAATGTTCGCATGAAGGAAATTGTTGTTGGGATCGCTCGAAACCTTTCAA
TGGTCGATGCCCAgACTGTGCTGATCGTTATTCGAaatcattttgcaaaa
tttttgaccttgATTGTAAAGATACCAGTGGGATCAAGGGAGTTCAAATT
CGAGTCATTTGTGCTCAAACTTGTGGCCTCTGTTCTGTTCCAAAGGAATG
CATGGACGATTTGATTTACGGAGAATTCTGCAACTCATGGAAGGAGCGTG
GACAATGTTCAAAACAACCGCTCATCATGAAAACATACTGTAAGAAAACA
TGTGGTTTCTGCAACGACAgtagcaacaacaacaacaacaacaacaacaa
caacgacaacaacaacaacaacaacaacaacaacaacaacaacaacaaca
atgtTTCTAAAAAAACATAAATGTGTTCAAGGAATTTCTTTATCCTGGCA
TCATGCATATTTTTGTCTATGGTTCATCAAATGTCATCGGTTGAAGTTGA
TGCTACGAGCAATGAGATCGATTTACGTCCGCAATGCAAAGATTCACACG
ATTTATATTACGCCAATTGTTTTAACTTAAAGCGAGCAAAACTTTGTGAC
TtggagaaaaataaaatgagaTTTTACTGTCCCCTCACTTGTCGCCAGTG
TAaagGACCAATCGATGAGAATAGGGTGAGTAGGCCGCCTGTTGCTAAGT
GTTTGTCTTCACGGTTCGGATGTTGCAACGATAACGAAACAGCTGCTCAA
GGAAAAGACTTTCTCGGGTGCCCAGAACGATGTTTTGACACACCAAACTA
CAGTTGTGATTTCTTCCGGAAAATCGGATTCTGTAACTTGGGATACTACA
AAGAACAGATGTTATTGAGATGTCCTTTATCATGCAACTACTGTAAAAAT
GAGATCAAAGTGAACAAATGCCGTAATCGCTGGGACGACGTGACATGCGA
GCGTGCTGCCAAACACGGTTACTGTACGGTATTGAAATACGAGAAACGAC
TCACGAAGAATTGTCGTAAATCTTGCGACAAGTGTAAACGAAGCACAGCA
CCCGCTTTGCTATCGGTCGCTCGTGAATGTTCGCATGAAGGAAATTGTTG
TTGGGATCGCTCGAAACCTTTCAATGGTCGATGCCCAgACTGTGCTGATC
GTTATTCGAaatcattttgcaaaatttttgaccttgATTGTAAAGATACC
AGTGGGATCAAGGGAGTTCAAATTCGAGTCATTTGTGCTCAAACTTGTGG
CCTCTGTTCTGTTCCAAAGGAATGCATGGACGATTTGATTTACGGAGAAT
TCTGCAACTCATGGAAGGAGCGTGGACAATGTTCAAAACAACCGCTCATC
ATGAAAACATACTGTAAGAAAACATGTGGTTTCTGCAACGACAgtagcaa
caacaacaacaacaacaacaacaacaacgacaacaacaacaacaacaaca
acaacaacaacaacaacaacaacaatgtTTCTAAAAAAACATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_009935	XLOC_009935	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00017737-protein	TCONS_00017737-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000274	supercontig	sc0000274:243875..254091 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.818853	0.784464	0.488102	0.348567	1.02643	0.832714	0.872366	0.768534	0.625976	1.18651	0.793013	0.591292	44.3611	36.7628	2.01458	1.4459	1.3191	1.23035	136.285	170.4	1.02417	1.16012	2.61433	3.09711	1.60112	2.08022	1.03475	1.04437	9.0754	10.3828

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR003582	ShKT_dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00017737 vs. Swiss-Prot (Human)

BLAST of TCONS_00017737 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00017737 (transcript) - C. hemisphaerica