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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017755 ID=TCONS_00017755|Name=TCONS_00017755|organism=Clytia hemisphaerica|type=transcript|length=935bp
TTTCCTTGGTCAATACTGGTGCATTTAAAATCCACAGAAAGGAATGAATG
TGAGGGCTTCTGCGTACTTGAAATTCTACTCGAATAGCGTAGAAAGTTGT
TTTACCGAGTGGGCCGTCCAAAacaattgttttaaaaaatatttctactC
TGTATTGAAAATGCCTTGCTACAAGTACAGGGTTACTATTTAATAAATCA
CACCTTTCGTTATAAAAAAGATTCTCGATAAATTCATCGGTTACGTTTTG
ACCCTTGAGTTTGTAAATTATGGAGATGAGTTCGTTCCAACGAAGGTCTG
CACAACTCAATGTCTGAAAGAACGTTGGTGGTCCTAATTGTATAACCATT
GCTAAAACTTCTTGCTGGAATTCCTTTAATAGTACTCATGAAGGCAAAAG
CTTTATCGTTTGCTATGAATTGCCTTactgtttctttgaaattctgaCTT
AACATACCAGTATTTAAATTTGAGCCAGCAACTTTTCTCATTGCAACATT
TATCTGATTGGTCAAAGACACTTGCTGAGTtacaaaattagcaaaaaata
tGTAGTCTGGGTCTGAAGCAAACTTTTGTGTGTAGTTCAACAAACGGTGG
TTGAAGTATTTGGATGGACTTAGTTTAACATCACGTTCAACTTTACCTTT
AGGAAATAAATGAGGATGAGCAAGcatttcacaattttcatcATGTAAGA
TTGAAATTGGTTTTCTACCCTGACCAGGTGCTAATgacaaaatttcatta
tctacTTCTGCATCAGAAGGAGTGTGAGGCATTAGAGTAGTTTCATTTGC
ATTTGAGCGACGAGCATCAAGTGGGTTGTCGGTTGTCTCAAGCTCTTCAG
AATCTGAAGCATTATTTTGTGGATCATCAGGTTCAGTGATATCGTCATTG
GAAGCAATTTCACTCAATTGGTCACTTTCATTAGA Run BLAST on NCBI protein sequence of TCONS_00017755-protein >TCONS_00017755-protein ID=TCONS_00017755-protein|Name=TCONS_00017755-protein|organism=Clytia hemisphaerica|type=polypeptide|length=233bp
SNESDQLSEIASNDDITEPDDPQNNASDSEELETTDNPLDARRSNANETT
LMPHTPSDAEVDNEILSLAPGQGRKPISILHDENCEMLAHPHLFPKGKVE
RDVKLSPSKYFNHRLLNYTQKFASDPDYIFFANFVTQQVSLTNQINVAMR
KVAGSNLNTGMLSQNFKETVRQFIANDKAFAFMSTIKGIPARSFSNGYTI
RTTNVLSDIELCRPSLERTHLHNLQTQGSKRNR Run BLAST on NCBI transcript from alignment at sc0000274:23401..24335 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017755 ID=TCONS_00017755|Name=TCONS_00017755|organism=Clytia hemisphaerica|type=transcript|length=935bp|location=Sequence derived from alignment at sc0000274:23401..24335 (Clytia hemisphaerica)
TCTAATGAAAGTGACCAATTGAGTGAAATTGCTTCCAATGACGATATCAC
TGAACCTGATGATCCACAAAATAATGCTTCAGATTCTGAAGAGCTTGAGA
CAACCGACAACCCACTTGATGCTCGTCGCTCAAATGCAAATGAAACTACT
CTAATGCCTCACACTCCTTCTGATGCAGAAgtagataatgaaattttgtc
ATTAGCACCTGGTCAGGGTAGAAAACCAATTTCAATCTTACATgatgaaa
attgtgaaatgCTTGCTCATCCTCATTTATTTCCTAAAGGTAAAGTTGAA
CGTGATGTTAAACTAAGTCCATCCAAATACTTCAACCACCGTTTGTTGAA
CTACACACAAAAGTTTGCTTCAGACCCAGACTACatattttttgctaatt
ttgtaACTCAGCAAGTGTCTTTGACCAATCAGATAAATGTTGCAATGAGA
AAAGTTGCTGGCTCAAATTTAAATACTGGTATGTTAAGtcagaatttcaa
agaaacagtAAGGCAATTCATAGCAAACGATAAAGCTTTTGCCTTCATGA
GTACTATTAAAGGAATTCCAGCAAGAAGTTTTAGCAATGGTTATACAATT
AGGACCACCAACGTTCTTTCAGACATTGAGTTGTGCAGACCTTCGTTGGA
ACGAACTCATCTCCATAATTTACAAACTCAAGGGTCAAAACGTAACCGAT
GAATTTATCGAGAATCTTTTTTATAACGAAAGGTGTGATTTATTAAATAG
TAACCCTGTACTTGTAGCAAGGCATTTTCAATACAGagtagaaatatttt
ttaaaacaattgtTTTGGACGGCCCACTCGGTAAAACAACTTTCTACGCT
ATTCGAGTAGAATTTCAAGTACGCAGAAGCCCTCACATTCATTCCTTTCT
GTGGATTTTAAATGCACCAGTATTGACCAAGGAAA Coding sequence (CDS) from alignment at sc0000274:23401..24335 >TCONS_00017755 ID=TCONS_00017755|Name=TCONS_00017755|organism=Clytia hemisphaerica|type=CDS|length=702bp|location=Sequence derived from alignment at sc0000274:23401..24335 (Clytia hemisphaerica)
TCTAATGAAAGTGACCAATTGAGTGAAATTGCTTCCAATGACGATATCAC
TGAACCTGATGATCCACAAAATAATGCTTCAGATTCTGAAGAGCTTGAGA
CAACCGACAACCCACTTGATGCTCGTCGCTCAAATGCAAATGAAACTACT
CTAATGCCTCACACTCCTTCTGATGCAGAAgtagataatgaaattttgtc
ATTAGCACCTGGTCAGGGTAGAAAACCAATTTCAATCTTACATgatgaaa
attgtgaaatgCTTGCTCATCCTCATTTATTTCCTAAAGGTAAAGTTGAA
CGTGATGTTAAACTAAGTCCATCCAAATACTTCAACCACCGTTTGTTGAA
CTACACACAAAAGTTTGCTTCAGACCCAGACTACatattttttgctaatt
ttgtaACTCAGCAAGTGTCTTTGACCAATCAGATAAATGTTGCAATGAGA
AAAGTTGCTGGCTCAAATTTAAATACTGGTATGTTAAGtcagaatttcaa
agaaacagtAAGGCAATTCATAGCAAACGATAAAGCTTTTGCCTTCATGA
GTACTATTAAAGGAATTCCAGCAAGAAGTTTTAGCAATGGTTATACAATT
AGGACCACCAACGTTCTTTCAGACATTGAGTTGTGCAGACCTTCGTTGGA
ACGAACTCATCTCCATAATTTACAAACTCAAGGGTCAAAACGTAACCGAT
GA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017755-exon-sc0000274-1491911889:23401..24335 | TCONS_00017755-exon-sc0000274-1491911889:23401..24335 | Clytia hemisphaerica | exon |
| TCONS_00017755-exon-sc0000274-1510915933:23401..24335 | TCONS_00017755-exon-sc0000274-1510915933:23401..24335 | Clytia hemisphaerica | exon |
| TCONS_00017755-exon-sc0000274-1575043694:23401..24335 | TCONS_00017755-exon-sc0000274-1575043694:23401..24335 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000274 | supercontig | sc0000274:23401..24335 . |
Blast
The following BLAST results are available for this feature:
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