TCONS_00017756 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017756
Unique NameTCONS_00017756
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length244

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017756 ID=TCONS_00017756|Name=TCONS_00017756|organism=Clytia hemisphaerica|type=transcript|length=244bp
NNAAAAGCGTTTCATACAGTTAATCAGTGATTTGTGGCAAGGATCATGAT
GTTAGGTTAAGATTTactttgaaatagctttaactTTTGCAAAGTTTGTA
CTTCGATACAAACCAGGACAAAATAGTTTCACGCCACTCTGCTaccattt
tgcaaatttttgcaaattctATTTTCTTACTTCGTGTAAAGATGGGGGTT
ACTAGATAGTTTAGTTTTACGCTGGCATTTTATTTTCTGCTACT
Run BLAST on NCBI

transcript from alignment at sc0000274:26928..27171

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017756 ID=TCONS_00017756|Name=TCONS_00017756|organism=Clytia hemisphaerica|type=transcript|length=244bp|location=Sequence derived from alignment at sc0000274:26928..27171 (Clytia hemisphaerica)
AGTAGCAGAAAATAAAATGCCAGCGTAAAACTAAACTATCTAGTAACCCC
CATCTTTACACGAAGTAAGAAAATagaatttgcaaaaatttgcaaaatgg
tAGCAGAGTGGCGTGAAACTATTTTGTCCTGGTTTGTATCGAAGTACAAA
CTTTGCAAAagttaaagctatttcaaagtAAATCTTAACCTAACATCATG
ATCCTTGCCACAAATCACTGATTAACTGTATGAAACGCTTTTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009945XLOC_009945Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017756-exon-sc0000274-1491911889:26928..27171TCONS_00017756-exon-sc0000274-1491911889:26928..27171Clytia hemisphaericaexon
TCONS_00017756-exon-sc0000274-1510915933:26928..27171TCONS_00017756-exon-sc0000274-1510915933:26928..27171Clytia hemisphaericaexon
TCONS_00017756-exon-sc0000274-1575043694:26928..27171TCONS_00017756-exon-sc0000274-1575043694:26928..27171Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000274supercontigsc0000274:26928..27171 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.843482	1.64506	0.955033	1.8687	6.41994	10.6538	4.70196	2.03046	0.710786	0	1.70912	0.561754	0.560973	0	2.99186	1.54198	0.381669	0	0	3.75308	0.815526	0	1.93424	4.39626	0	0	0	3.703	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017756 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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