TCONS_00017761 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017761
Unique NameTCONS_00017761
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length242

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017761 ID=TCONS_00017761|Name=TCONS_00017761|organism=Clytia hemisphaerica|type=transcript|length=242bp
CAACTACGAACGAACAACAAAATCGCTCCACGAGTTGATTGAAAACGCTA
CGGAAAATGAGATGATTGAAGTCAATCACTGTTTCGTCTCAAGAGACCAT
CGAGTGTATCACGTAATCTCTGTGAACGACAAATGTTTGCCGGTTATTGA
GAAGTCGTCCTTGTCGACACATCGACACATCAATCAAGATGTGGATAGAT
GCTTAATACCGTAGTTTGTCTTCATTAAAACCACTCTGTAAT
Run BLAST on NCBI

transcript from alignment at sc0000274:104413..104654

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017761 ID=TCONS_00017761|Name=TCONS_00017761|organism=Clytia hemisphaerica|type=transcript|length=242bp|location=Sequence derived from alignment at sc0000274:104413..104654 (Clytia hemisphaerica)
ATTACAGAGTGGTTTTAATGAAGACAAACTACGGTATTAAGCATCTATCC
ACATCTTGATTGATGTGTCGATGTGTCGACAAGGACGACTTCTCAATAAC
CGGCAAACATTTGTCGTTCACAGAGATTACGTGATACACTCGATGGTCTC
TTGAGACGAAACAGTGATTGACTTCAATCATCTCATTTTCCGTAGCGTTT
TCAATCAACTCGTGGAGCGATTTTGTTGTTCGTTCGTAGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009950XLOC_009950Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017761-exon-sc0000274-1491911889:104413..104654TCONS_00017761-exon-sc0000274-1491911889:104413..104654Clytia hemisphaericaexon
TCONS_00017761-exon-sc0000274-1510915933:104413..104654TCONS_00017761-exon-sc0000274-1510915933:104413..104654Clytia hemisphaericaexon
TCONS_00017761-exon-sc0000274-1575043694:104413..104654TCONS_00017761-exon-sc0000274-1575043694:104413..104654Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000274supercontigsc0000274:104413..104654 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.849349	0.986175	0	5.87287	0	1.26976	1.12103	5.36522	3.16972	4.00073	5.67584	5.21339	9.02359	1.55428	3.18453	6.82546	3.35086	5.55527	1.93773	2.52636	1.23227	0	0	1.04226	2.69225	7.16577	8.92209	0.966727	0.984942
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017761 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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