TCONS_00017801 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017801
Unique NameTCONS_00017801
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2828

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017801 ID=TCONS_00017801|Name=TCONS_00017801|organism=Clytia hemisphaerica|type=transcript|length=2828bp
CtgcttaatttttaaaaacccaCACACAGAAATAGATTTTAAGTAATAGT
TCACAGTTTTTACATAAATGAACGCGCATTTATAAATTAAAGCCCTCCAA
TTCATACTGAAAGGAACTGATATaaagtttttatataaaaaatagcgACA
TCTGCAGGGGTTTACTATCATTAATTATGCGCATAGCAAGATCTATTTAT
ATCCGCTGTATATATTCAAAATACAAGAGAAAGAAAGTATCAGTCAGTCA
CACAGTATATATTGTTattaaagaaaagaagagaTTTTTGCTGGTCGAGG
GTGCAAACTACTGAGAGAGAAAAGTTTTGCAAGAGggcacaatttaaaaa
aattggttaTTTCAACGTGCGGATCACTATTTCTACGATCGGCTGACGTA
AAGTTTTCTACGATACTGTTTTCTGGAAAAAtatgacgtcaaatatttta
tttaacgTCAATTCGTCAATTGTTAACAGTCAATAATAGATTTCATACAA
ACAAGCTTTCTTTCCAATCTCACCTTCGCTCAATCAACAACACTCAACAA
CACCACAACCAACCAAGTTCTCTCTCTCTCAACCTTCAACGCAAACAAGC
AGCAACAAGAATAACTTACAACAGAACTTTAGCTAAAGATTAACACTGAT
CTAGCTTGTGTACAACCATaaggaaaaagttaaaaacattcttATTTCAT
CTTTTTCGCATACTTCAACAACAACAATGTATTCCTGGGTCGCCTCATTT
TTCAACGAAGATTCTACCAGCAACACTACCTTGTACGCTGATCAACTGAT
CGCACAACAAACAGGTCAACAACCAAAGGAAGAATGGACCTGGATCGAGC
TCATTGATGATAAAGAAGAAAACGGTCTCATCATTGTACAGACGGACGAA
AGTGTCCGCGCGCACAACCTCGAAACAGAAGATCCCACGCCTTCCAAACG
TAAGCGGCCGATCACAAAACGCGATGTTCTCGCGCGTAAAACTTTCAGGC
GATCTTTACATACTGACCGCCCTCTGATGAGTAAACCACGTCCATCTACC
CTCCGAAAGCTCGCCAAAGCTGGACCATTAGATGTTCAACTACGTAAATT
CTGTAAAGTTCAACAGACCACTTCTGAAGTGCTGTCTGCAACCTTTCCAA
CATGTAATTTATTCAATATTGGTACCAATACACAATTTGATTGCGATATC
TCATACCTGCTGAATAACACAACGTTCTTAAAGTGCGTCCTTGAAGGAAT
TCTCAAAGAAGAAGTCATCCTAGACCGTTCTTTACAACAATGGCTCGAAC
TTCTTATGAATGTTGGACGAAAGAAGCAAATCAAAGCTAATCAACAACCG
CTCGCTATCGAATGGAGAAAGAAAGAGGAGGAACAGTTATTCATTGAATG
GCATTCAACTGAAGAAACCGCCCTCCCCGCCAAAGAAGGCGTTTTGATTG
AAGAAATTGATGATATAGAATTTGAACCTCACGTTAACGATGATGACGTA
ATTATAACCATGGTTCGATATCCATTACCAAGTTGGTTACGACGTATCAA
TACTTTTGATAACCGTCACGAGTTACCGTGTCATTTGAAACACCTCAGAG
CCGAAGATTTTCATCAAGCTTGCGGAGAGAGTAACGTGTTGCCTATTCAC
ACTTGTGATCCCTTGACTCGAGTACCTGATCATTTGAAACAGCTAAGACC
AGAAGATTTTCATCAAGCATGTGGTGAAGCCAATGTGATGCCAGTTCAGA
CCTGTGATACGCTGACTCGAGTCCCATCATGGATGCGACGTCTTGATGTG
GTAGAGTCACGTCACGATAAAGAACACGCACCAACGGTACGCATCCCTAC
CTGGATGAGGCAGTTGCGTGTCAATGATGAGGAGATGGGAGGCTGCTATC
GGTTACCTTCATGGATGAACCGTATCAATGTTGATATTCCGGACCCAAAA
CCAACCAATTGTGACTTGATTCAAACAGTAAGAGGGTCCAATTCTTGGTT
CTCTACTACCGCTACCACAAGGTGGGTCTCCAACACTCGCCCCAGGAAAT
GGATTCGTGCTTCATCAGAAACTGCCATCCTTCTGAATAATGCTCAAACC
ATTTGTAACAGTATGATCAATTTCGCTATGGTACTGGCTACTGCTACTTG
TAAAGCGGCTGAGAAGACAGCTACTGATCTTTCTCTCTCCAGTCCTGTAC
CCAACACCATTCAAGCCAGCGCATGTGCTCAGAAAAAGAAACGTGTTTTA
TCACAAAGTTCATTATCAGCTAAACACCTTGCTACGAAGAGtgcgaagaa
aaataagaaatggTTAAGTAAAGTTAACAATGTGAAGAAGATTCAAAACA
AACGTGACCAACGGTACAACGCGAAATCTTTCAGTGGAAGCAAATGCGTA
CGAGCTTGTTAAATCcatcaataaaacttttttttgtaacATCTTAATGA
ACATTAtgtgaaataaaattttgtgaaaactaCCAAAAAAATATGCACTT
TTATTCAATCTATCCCAAGTCGTTGACTTGAATCGAGCTAACCATGGATG
TGTGTATGTTGTTTCTTTAATTAGTCAAAACATTTGATTTCATTGTGTTT
TTTCAATATGCCCGACGCATCCAGGATTGCTCATAAGAATTATCACTTAC
GAAAAACGTGATTTCACCACCACTACGTAATTAAAGTCATTTGTTTAAAT
TTATCctagaatttattttttgttagttAGTTCTTTCGCGTTTCTTCATA
TATTTATAGCTACACTTATCTATTTATTTTATGTGAATTTTTGAtgaata
gaaaatttttgaaattctttaataaaGT
Run BLAST on NCBI

protein sequence of TCONS_00017801-protein

>TCONS_00017801-protein ID=TCONS_00017801-protein|Name=TCONS_00017801-protein|organism=Clytia hemisphaerica|type=polypeptide|length=561bp
MYSWVASFFNEDSTSNTTLYADQLIAQQTGQQPKEEWTWIELIDDKEENG
LIIVQTDESVRAHNLETEDPTPSKRKRPITKRDVLARKTFRRSLHTDRPL
MSKPRPSTLRKLAKAGPLDVQLRKFCKVQQTTSEVLSATFPTCNLFNIGT
NTQFDCDISYLLNNTTFLKCVLEGILKEEVILDRSLQQWLELLMNVGRKK
QIKANQQPLAIEWRKKEEEQLFIEWHSTEETALPAKEGVLIEEIDDIEFE
PHVNDDDVIITMVRYPLPSWLRRINTFDNRHELPCHLKHLRAEDFHQACG
ESNVLPIHTCDPLTRVPDHLKQLRPEDFHQACGEANVMPVQTCDTLTRVP
SWMRRLDVVESRHDKEHAPTVRIPTWMRQLRVNDEEMGGCYRLPSWMNRI
NVDIPDPKPTNCDLIQTVRGSNSWFSTTATTRWVSNTRPRKWIRASSETA
ILLNNAQTICNSMINFAMVLATATCKAAEKTATDLSLSSPVPNTIQASAC
AQKKKRVLSQSSLSAKHLATKSAKKNKKWLSKVNNVKKIQNKRDQRYNAK
SFSGSKCVRAC
Run BLAST on NCBI

transcript from alignment at sc0000276:211297..221850-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017801 ID=TCONS_00017801|Name=TCONS_00017801|organism=Clytia hemisphaerica|type=transcript|length=10554bp|location=Sequence derived from alignment at sc0000276:211297..221850- (Clytia hemisphaerica)
CTGCTTAATTTTTAAAAACCCACACACAGAAATAGATTTTAAGTAATAGT TCACAGTTTTTACATAAATGAACGCGCATTTATAAATTAAAGCCCTCCAA TTCATACTGAAAGGAACTGATATAAAGTTTTTATATAAAAAATAGCGACA TCTGCAGGGGTTTACTATCATTAATTATGCGCATAGCAAGATCTATTTAT ATCCGCTGTATATATTCAAAATACAAGAGAAAGAAAGTATCAGTCAGTCA CACAGTATATATTGTTATTAAAGAAAAGAAGAGATTTTTGCTGGTCGAGG GTGCAAACTACTGAGAGAGAAAAGTTTTGCAAGAGGGCACAATTTAAAAA AATTGGTTATTTCAACGTGCGGATCACTATTTCTACGATCGGCTGACGTA AAGTTTTCTACGATACTGTTTTCTGGAAAAATATGACGTCAAATATTTTA TTTAACGTCAATTCGTCAATTGTTAACAGTCAATAATAGATTTCATACAA ACAAGCTTTCTTTCCAATCTCACCTTCGCTCAATCAACAACACTCAACAA CACCACAACCAACCAAGTTCTCTCTCTCTCAACCTTCAACGCAAACAAGC AGCAACAAGAATAACTTACAACAGAACTTTAGCTAAAGATTAACACTGAT CTAGCTTGTGTACAACCATAAGGAAAAAGTTAAAAACATTCTTATTTCAT CTTTTTCGCATACTTCAACAACAACAATGTATTCCTGGGTCGCCTCATTT TTCAACGAAGATTCTACCAGCAACACTACCTTGTACGCTGATCAACTGAT CGCACAACAAACAGGTCAACAACCAAAGGAAGAATGGACCTGGATCGAGC TCATTGATGATAAAGAAGAAAACGGTCTCATCATTGTACAGACGGACGAA AGTGTCCGCGCGCACAACCTCGAAACAGAAGATCCCACGCCTTCCAAACG TAAGCGGCCGATCACAAAACGCGATGTTCTCGCGCGTAAAACTTTCAGGC GATCTTTACATACTGACCGCCCTCTGATGAGTAAACCACGTCCATCTACC CTCCGAAAGCTCGCCAAAGCTGGACCATTAGATGTTCAACTACGTAAATT CTGTAAAGTTCAACAGACCACTTCTGAAGTGCTGTCTGCAACCTTTCCAA CATGTAATTTATTCAATATTGGTACCAATACACAATTTGATTGCGATATC TCATACCTGCTGAATAACACAACGTTCTTAAAGTGCGTCCTTGAAGGAAT TCTCAAAGAAGAAGTCATCCTAGACCGTAAGTAACTTTTTACTATCGTAG TTGCTTATCGAAGCAAGTACTTTCGATGATTCATCCTTTTTCCTCTTTCT ATTTCATCAAGTTTGGCTCATTTTTAGGGAAACTGGGTAGGAGTGAAAGG TGTTTCTTATTTTGATAACAATTGTGGTTAGAAATGAGGTACTATCAATA GGATACAATGGTTGATGAAAACACCCCTGTGTCACAGACCAACTGGGACC CCAAATTTCTCCCCTAATGGGAAAATACCCTGGGAAATTGACTTTGATCT CATCACCATTCGAAACTCAATGTTTAAAAATTTCTTTCCAAAACCATCCG CACTGGATTGTTTAACCTTGTAACAATAGAATTTCTATCCCCTCTGAGAT TAAAAGTTTCATCGGGGCTGTGAGACAGGGGTGTATGAAAGATAGAAATA GAAAGTAGCGTCCTCGATCTTTTAGTTATTTTTTCGAGATGTCAATTTGG TCACAGTAGAACCTCCAATCGACGGTCACTTTATGACCGATGGTGTCCGC TAATGATTTTTCTGACTTTACAAACTTCCAAAACTGTAAAATTGAAACCT GATAGCAATAACTTTAAAAATACGCGTACTCTCGGGTACCTAATAGCCGG GGGGGGCGCTAATTATTTTTTCAAAAATGTTCCACCAAGGACATTCTTAT TCCAACCCCACCCCCTCCCACTTATTGATTTTTTTGAAATTTATTTTAAA GTTCCCTTTTTTGCCCTAATTCTACTGTATTAGCCTTTTCGCCCAGGACA TTTTTATTCCAACCCCGCCCCCCCCCCCCCCCCCGCTTATTAAGCTTTGA GATTTTTTCCAACCCCCCCCCCCCCCCGCTTATTAAGCTTTGAGATTTTT TCCAACCCCCCCCCCCCCCCGCTTATTAAGCTTTGAGATTTTTTCCAACC CCCCCCCCCCCGGCTATTAGGTACCCGAGAGTAGACCTCCCTTTGAAATC TGCACAACAAAGTATCTCTTGCTTCGCTGGCCTGCTGCAAGATTGAGAGC AAAATGTTTTGAACTCACGTTCTATCAGTTTCATTTTCTGCAAATTTTAG ATAAGGCTAATAACATAAACACTCAGCAAAATGTTGCATTATTTTATCCG TATTGCTTCGATTAAACGCCCCGGGCTTTTATTAAATTTGTCGGATTTTA GGAGGGGCGTTTATTGAAAGTTTTACTTTTAGTGAGGGGCGTTTATTTTC GAAGTAATACGGTATATGTTTTAGTTGTTAATAGTCGAGCCGAAAAGCTA GTCTTCAAAACTTCCCCAATCGGCAATAAGTATTACCGTTTTCATCTGAA ATTTTAAAGTTAAATTTAGTAACGTTTATTAAATTTGTTAGTGTGTTTCT GAAGCCTTAAGAAAGTTTACTCGATGTCTGAGAGTATTTATCTGATAGAG AGGGGGGATATTCCAAAAAAGACGTTTATTGATAAATTGATAACGGGAGA ACCTTCAAGAAGGAATATCTGTGTTTTTAATCAAAGCTGATCTAAATATT TCCTGTAGTGAGGGCAAAAGCTAAACCTCAAACAGGACCGTCTGGTCTGA TTCAATTCCTTCTTAAATAAATTTAGAATCACTATACTACAATATAAAAG GAAGTAATTTTAGCGAATTTACCAAAAATCTGCTATACAGTAGAGTCTCT TTAACACGAACCTCTATAACTCGAAAAAGTTTTCTCGTCCCCTCAGTTAA CAATTCTTTATAATACTCCATAACTCGAAATTTCCTTAACTCGAAAAAAT GTGTGTTCCCCGTTTGGGTTAGAATTATAGAGACTCCACTGTATTAAGTT CCCGCCAAAAACTATTTTTTACGCTCATTTATTTTCCAAATTCTTGATAT TCAAGAGTACAAAACTGCTTTTTTGCTCATTTGAAAACGATTTTCGCAAA AAAAATATCGCTTAGCTGCTGAATTAAATCCGACGCCATCCGCCCAATTG AATTGAAAAAAACTTTTTCGGCCATATCCTCCAAACTTCTTCCATTAGGT TATGTAGTCCAAAAGACTTCAACACCTTCATACAATTCATACTGTAGTCG CCCTAAATCGAAAATTTATTGATAAGAATGAATGAGTCACTTTCATTTTT AGGGCCAAAAGTTTGGGAATTAATTCCGGATGAGTATAGAGATATAGTCG ATCTTAGTATTTTTAAGGAAAAGATTAAGCAGTGGANNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNTTTTAAAAAGATTTTTTGTACAAGAACGGTTTAGAGG CCCTTGTGCCTCAACTGTAATCACCTTACAAATTGTAAAGTAGCGTTGAC TTTTATTAGCCTTTGCTGCTACCTGTTCGTCAACTTGAAATAAACTATTA CATACATACATACCATACATGCCCTTAATGTCCAATATTTTGCTTGATAA TAGAAACCAACCAATATTTAAATTTTCTACGAAGCTTCCAAAACAGCATG AGTTTAAAACCCCTTCTCCTTTTTATCACAAATAAAAGATTGATGGACAA ACAAGAAGTGATACAAGACTTAAATTGAAGACGATGAACTTTTAACCCCA TTTTGTTGAAAGAAATCACCCCGAAAACTCCACCTAAATAAACATTCTAC CGATATGTTCAGGTTTTTTTATGCCTGTCCTTTGCATAAATATAAAAGTT TGAAGTGAAAAGTATGCTCGGTCTGAGGGTTATTTTGAATGTCCAGGGGA TCAACTGATGCTTGTCCGGGGGTCAAAGTTCACAAAATCCGGGGGTAAAT TTCTAAAAAATGTTATGTCCTCCACCCCCCCATATTCATCTTTTTTCTGG AAAAGCCCTTTTTAATAAAGAAATGGAAAAAATTTGAACCAGAAGAATTC ATTTCCAGAAACCGCAATTTTCAGAGTTATAATTGAGTTTTATTTTATCC TCAATTTTCAAAAAAGAAGAAAAAGATTTAGACAGTGCAAGTAGACAGCT CATTCAGTATTTTCAAGACCTACAGGGGAGCAAACTGTTTCGGCAATATA TTGGGTTTTCCCCCAGTTTTCCTAGACATACTCAATTATTTTTGATGTAA AATACCCGGGGGGGGGGGGAACTAGGGCAAAATGGGCTANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNGGGGGGGGGGTAACTAGGGCAAAATGGGCTACGGGGAT GCGCCGCTGGTCAGGGTACCTTTTTTTAACCTCTACGAGTCCCAGGTAGT GTCACAAAAACACCAAAATAGAAAAATCAGTCCCTCGTAGGGTGCCTTTT TGAAGGTAAAATAACAGGTTTGGAATCAGTGGTCTCCGTGGTATTAGGTA GCGCGGGAGTAAAACATTGCCAGACTAAATCTCAATTTTGGTTAGTATCA GTTACTATAGGATTGAAATTCTCCCCAGCGCTCTTATTTAGGAATGGAAA CAAATTTCACCGGTCCAAGGCACAAAAGAAATACAATTCGCCGGCCTAAA AATTCGGTTCACCGCCTCAAGTACATATTTCAATTCACGCTAATCAACAC ACTGGGCTGCTAATAATTCGCGGGCCTTGGATCTAGAATTCGATGGAGCT AACTTTTTCTTCAATAGCCTATCAAAGACAATCCAGAACTCCTGATTCTC AAATAGATTTGTTTGTTTTAAATTTGAGTGATACACTTACATACAAAATG CATAAGAAAGGACTATAGTGCTCCAAGAATAACTAGATAATTTAGTCGCG AATCCATTACATAATCTTCAAGATACAAGCAACGAAATTGTTTACACCCT CTTCTCATAGACCCACTGGGACCCAATCCCACTGCAAAAATTTGCTAAAA TATTGTCCCAAATGGGAAATTATATACTCCAATTTTTGTCCCCAATGAAA AAAATAAAATATTATGCTATTTTTCCTATCCCCACTTAATTTTCTGACTT GCAATTTAAATCCCCAGCCAAAAAGATATGGGAATATCAATCGCAATGGA GTTTCAGTCCACTATTATTATCCCCATTGACTGAAAAAATCCTACCGGGT TCTTTGAGAAGGGGGTATTTGTCGACTTGGTTTTCTTTTAGCTCTTCCTA ATTTCTCTTCCATGCTCTGTTCATCGTATGATTGCATAACGTTGAACCAC TATGACGTCAACTTTCTTTTCTAAACCTCTAAACTTTGAGAGATTATTAA GGTTAATCTTCAGTCTCAGAACTCTCTGACTTTAGAAAATAAGACATATT GAAAATCAAATTGACATTGTTGTGAGTCAAACCTGTTTTATATTAACTGC ACTATGAAAAAGTTTTCAAAATCTTTCAATAACTTTCCAAAAAAGAGTTG AACGTTTATTTTTCAAACTCATTTCAACAACACCACCCCGTTGATTCCAA AGGTTGATATCTGACAAACCAAATTACTTTTTGAGTCTTAAATTAGCTTA ATATAAGAACTCATGGACAAAATGTGACGCAAAAATCGCTTGCTTGTTGA TGAAACTTTCTACCGATGAATCTATTACCAATAGGGTATGCTTAAAGGTT TTATTATTACATTAGTATCCTCGTTTTATATCAGACACATATTTCATATC AGGACTGACAGTGTCTGCCTATTGTTATTTTGTGCTGATACATCATTTGT AGCACTGAAGATGATTTTTAATCGAAAAGCTTTTGCTCAATTTTAAAAAC ATTGTTGTTTTTCTTTAAATTTAATTAGAGAAGAATAGATTGACTGTGCT AGATAAGAGATCTTTATTGGCTCATCATTGGCTGAAACTAACTAACCAAT AAACAACGATTTACACGCTTTTTCTTTTATAAGAATACACTTTATAAGAA TGCGTCCATGATGAAAATGGCCTAAAAATTAAGAATATGCTTAGAATATC ACCATCATGTAATTTGGCTACTCAAGCTAAGAATGTCATTTTATGTTTGA GACGTGTGTACTAAATGTTAAATCTAGTCTGAATTAGTATCCTAACCTAA GAATTCTGTAAGAATATTTTAGGATGATTTTCCCAAAAAAGTTAAGAATA GATGAAATGGATTTACACCATTCTTATAAAAAAGCAAAAAAAAAATTGAC CCACACAAAAACAGTTTTTCTACTCATGCATCTTCGCTAGAGACTTGAAG AGTGGGATTAAAAAGAATTGCAAAAAATCTGTGAAACAGTGAATTCTTCA AAAGTCTACCCTTACAGTACATTTCTGATATCTCGAAAAACGTACCCTTA ACCGCCTCACATACCCCTCGGTAAATTTGCCCGGCTGTCCCCCCCCCCNA TTACATTAGTATCCTCGTTTTATATCAGACACATATTTCATATCAGGACT GACAGTGTCTGCCTATTGTTATATTGTGCTGATATATACAAAAAAAGTGG TTTTCTTTTCCTTTTTCTGGCCAATCTTGCTCCGCATCTGCGTCGATCCA ATGTGAAAAAGCTTGTGAATTAAAATTGATGAGTAAGCAAACGATATCAC TCTTATTTAAAAATAAAACTTTTAAATTTTCTAATACCGTAATTTTTCTG CTTCAACGCATGGAAATAGAAATGATTATAACTTTTTGACGCTATGCTTG AAATCTTAGAGAAAGATTTATTACAATATTTTAGCGTTGAAAATACGCGT TGATAATTAGCACGGAATTCCGTGTAATTAGAGAAGAATAGATTGACTGT GCTAGATAAGAGATCTTTATTGGCTCATCATTGGCTGAAACTAATTAACC AATAAACAACGATTTACACGCTTTTTCTTTTATAAGAATACACTTTATAA GAATGCGTCCATGATGAAAATGGCCTAAAAATTAAGAATATGCTTAGAAT ATCACCATCATGTAATTTGGCTACTCAAGCTAAGAATGTCATTTTATGTT TGAGACGTGTGTATTAAATGTTAAATCTAGTCTGAATTAGTATCCTAACC TAAGAATTCTGTAAGAATATTTTAGGATGATTTTCCCAAAAAAGTTAAGA ATAGATGAAATGGATTTACACCATTCTTATAAAAAAGCAAAAAAAAAATT GACCCACACAAAAACAGTTTTTCTACTCATGCATCTTCGCTAGAGACTTG AAGAGTGGGATTAAAAAGAATTGCAAAAAATCTGTGAAACAGTGAATTCT TCAAAAGTCTACCCTTACAGTACATTTCTAATATCTCGAAAAACGTACCC TTAACCGCCTCACATACCCCTCGGTAAATTTGCCCGGCTGTCCCCCCCCC CGAGCCTATGATAATAAATAAACTTATATTTTTTGTTCTTCTCGCTGCAT TGAGAAAAGTCAACAATCTTTTTATAATTCTTCTTCACTTTCAACGACTG TAATCAACCGATAATTGATCTTATTGCGCGTGCCGTTTTTCTTTACTGAC TATGTTAGACGATGTATATTATAGCCTTTTCTACGGGAAGAAGTACAGCT GATTGTGGGCAAAAACAACTAATAGAAAAAAAACGATAATGCAAAATAAA AAGTATTTCGTTCTTGAAAAAGAGAAAATTAAAAAATTATTTTCAGCACA CTCCCCAATTATCAGTGAAATGCAAACATCTTTTACTTTCTTGCTCCTTT TTGCTACATTGCCATTTCCTATTTGTAACATTTTGCAAAGTGTGGGAAGG TTATTTTAAAAACTTTAAAAACTATTTCGAAGATTTGGAAGGATTCACAA TTTGCAAATAATTATAGTCCAGGAAACGGATTTTTATTCTCGACTCTCGG TCAAATCTTCAATCGAAAATTGAACACAGATTGACAAACGATTCAAAAAG GTCTTCCGCCTTCGTTATTTCATTTTTTTTCTCGATCAGTTCGTAATAGA CTTGATTGTAATCGGGGCTCTGATGTGTATATGTGTGATCGCTGAAAACT ACTTTTTTGCAATGTCTTCAATAGATTATGTTCGGATTTGCCAAGGTTAA ACCGAACTCGAAAACAAAGACTAGAGGGGATATCTTCATAGCAAACACGC GCCTCAAAAGGATAGTTTGAGCTGAGTGGAAAATTGTCAATATTGTATAC GATATGATATACATTACAGCCCTTTATTTCGGAGTTCAGTGATAGTGACA GTGATAGGGGAAAAAATCAGGATTTCTTTTAAGCCCATTTGTCAAAAGAT GACATTGGGTATGAAAAGGCGATGTGGTATAGTGGCCATTGCACATGCGA CTGAGGTTCGATTCCCACTCGCAGCGGTTCACTTGGCAAGTGAATGAACC TTCGCCCGGGTCAACCCATACCATGTGAGGGGAATTGGGTAGTCAGTAAT TGAAAGCGTCTATAGCTGCGAAAATGGGCCTCAAATAAGCCTCCTGCGTC TCAACCAAATAGAAAGAAGAAAATCATATAAAAAATACGTGGCAACTTTC ATGAGGGCGGGGGTGGGGCTTTTTGCAGGAAAGGTAGACAAGTGACCACT CCTATGAAAAGTATTTGCATGCTGTCAAAGCATGCAGGAAATGTGTGAAA AGTAACTTAAGGGAAACATTTTGCTCTATCAGAGAAACCCTTCACTATGG TTTGAAATAATGGCTCTCTTTTTCCCAATACTGAATCTTTTTTCTAATTT AGGTTCTTTACAACAATGGCTCGAACTTCTTATGAATGTTGGACGAAAGA AGCAAATCAAAGCTAATCAACAACCGCTCGCTATCGAATGGAGAAAGAAA GAGGAGGAACAGTTATTCATTGAATGGCATTCAACTGAAGAAACCGCCCT CCCCGCCAAAGAAGGCGTTTTGATTGAAGAAATTGATGATATAGAATTTG AACCTCACGTTAACGATGATGACGTAATTATAACCATGGTTCGATATCCA TTACCAAGTTGGTTACGACGTATCAATACTTTTGATAACCGTCACGAGTT ACCGTGTCATTTGAAACACCTCAGAGCCGAAGATTTTCATCAAGCTTGCG GAGAGAGTAACGTGTTGCCTATTCACACTTGTGATCCCTTGACTCGAGTA CCTGATCATTTGAAACAGCTAAGACCAGAAGATTTTCATCAAGCATGTGG TGAAGCCAATGTGATGCCAGTTCAGACCTGTGATACGCTGACTCGAGTCC CATCATGGATGCGACGTCTTGATGTGGTAGAGTCACGTCACGATAAAGAA CACGCACCAACGGTACGCATCCCTACCTGGATGAGGCAGTTGCGTGTCAA TGATGAGGAGATGGGAGGCTGCTATCGGTTACCTTCATGGATGAACCGTA TCAATGTTGATATTCCGGACCCAAAACCAACCAATTGTGACTTGATTCAA ACAGTAAGAGGGTCCAATTCTTGGTTCTCTACTACCGCTACCACAAGGTG GGTCTCCAACACTCGCCCCAGGAAATGGATTCGTGCTTCATCAGAAACTG CCATCCTTCTGAATAATGCTCAAACCATTTGTAACAGTATGATCAATTTC GCTATGGTACTGGCTACTGCTACTTGTAAAGCGGCTGAGAAGACAGCTAC TGATCTTTCTCTCTCCAGTCCTGTACCCAACACCATTCAAGCCAGCGCAT GTGCTCAGAAAAAGAAACGTGTTTTATCACAAAGTTCATTATCAGCTAAA CACCTTGCTACGAAGAGTGCGAAGAAAAATAAGAAATGGTTAAGTAAAGT TAACAATGTGAAGAAGATTCAAAACAAACGTGACCAACGGTACAACGCGA AATCTTTCAGTGGAAGCAAATGCGTACGAGCTTGTTAAATCCATCAATAA AACTTTTTTTTGTAACATCTTAATGAACATTATGTGAAATAAAATTTTGT GAAAACTACCAAAAAAATATGCACTTTTATTCAATCTATCCCAAGTCGTT GACTTGAATCGAGCTAACCATGGATGTGTGTATGTTGTTTCTTTAATTAG TCAAAACATTTGATTTCATTGTGTTTTTTCAATATGCCCGACGCATCCAG GATTGCTCATAAGAATTATCACTTACGAAAAACGTGATTTCACCACCACT ACGTAATTAAAGTCATTTGTTTAAATTTATCCTAGAATTTATTTTTTGTT AGTTAGTTCTTTCGCGTTTCTTCATATATTTATAGCTACACTTATCTATT TATTTTATGTGAATTTTTGATGAATAGAAAATTTTTGAAATTCTTTAATA AAGT

Coding sequence (CDS) from alignment at sc0000276:211297..221850-

>TCONS_00017801 ID=TCONS_00017801|Name=TCONS_00017801|organism=Clytia hemisphaerica|type=CDS|length=3372bp|location=Sequence derived from alignment at sc0000276:211297..221850- (Clytia hemisphaerica)
GTTCTTTACAACAATGGCTCGAACTTCTTATGAATGTTGGACGAAAGAAG
CAAATCAAAGCTAATCAACAACCGCTCGCTATCGAATGGAGAAAGAAAGA
GGAGGAACAGTTATTCATTGAATGGCATTCAACTGAAGAAACCGCCCTCC
CCGCCAAAGAAGGCGTTTTGATTGAAGAAATTGATGATATAGAATTTGAA
CCTCACGTTAACGATGATGACGTAATTATAACCATGGTTCGATATCCATT
ACCAAGTTGGTTACGACGTATCAATACTTTTGATAACCGTCACGAGTTAC
CGTGTCATTTGAAACACCTCAGAGCCGAAGATTTTCATCAAGCTTGCGGA
GAGAGTAACGTGTTGCCTATTCACACTTGTGATCCCTTGACTCGAGTACC
TGATCATTTGAAACAGCTAAGACCAGAAGATTTTCATCAAGCATGTGGTG
AAGCCAATGTGATGCCAGTTCAGACCTGTGATACGCTGACTCGAGTCCCA
TCATGGATGCGACGTCTTGATGTGGTAGAGTCACGTCACGATAAAGAACA
CGCACCAACGGTACGCATCCCTACCTGGATGAGGCAGTTGCGTGTCAATG
ATGAGGAGATGGGAGGCTGCTATCGGTTACCTTCATGGATGAACCGTATC
AATGTTGATATTCCGGACCCAAAACCAACCAATTGTGACTTGATTCAAAC
AGTAAGAGGGTCCAATTCTTGGTTCTCTACTACCGCTACCACAAGGTGGG
TCTCCAACACTCGCCCCAGGAAATGGATTCGTGCTTCATCAGAAACTGCC
ATCCTTCTGAATAATGCTCAAACCATTTGTAACAGTATGATCAATTTCGC
TATGGTACTGGCTACTGCTACTTGTAAAGCGGCTGAGAAGACAGCTACTG
ATCTTTCTCTCTCCAGTCCTGTACCCAACACCATTCAAGCCAGCGCATGT
GCTCAGAAAAAGAAACGTGTTTTATCACAAAGTTCATTATCAGCTAAACA
CCTTGCTACGAAGAGTGCGAAGAAAAATAAGAAATGGTTAAGTAAAGTTA
ACAATGTGAAGAAGATTCAAAACAAACGTGACCAACGGTACAACGCGAAA
TCTTTCAGTGGAAGCAAATGCGTACGAGCTTGTTAAATGTATTCCTGGGT
CGCCTCATTTTTCAACGAAGATTCTACCAGCAACACTACCTTGTACGCTG
ATCAACTGATCGCACAACAAACAGGTCAACAACCAAAGGAAGAATGGACC
TGGATCGAGCTCATTGATGATAAAGAAGAAAACGGTCTCATCATTGTACA
GACGGACGAAAGTGTCCGCGCGCACAACCTCGAAACAGAAGATCCCACGC
CTTCCAAACGTAAGCGGCCGATCACAAAACGCGATGTTCTCGCGCGTAAA
ACTTTCAGGCGATCTTTACATACTGACCGCCCTCTGATGAGTAAACCACG
TCCATCTACCCTCCGAAAGCTCGCCAAAGCTGGACCATTAGATGTTCAAC
TACGTAAATTCTGTAAAGTTCAACAGACCACTTCTGAAGTGCTGTCTGCA
ACCTTTCCAACATGTAATTTATTCAATATTGGTACCAATACACAATTTGA
TTGCGATATCTCATACCTGCTGAATAACACAACGTTCTTAAAGTGCGTCC
TTGAAGGAATTCTCAAAGAAGAAGTCATCCTAGACCGTTCTTTACAACAA
TGGCTCGAACTTCTTATGAATGTTGGACGAAAGAAGCAAATCAAAGCTAA
TCAACAACCGCTCGCTATCGAATGGAGAAAGAAAGAGGAGGAACAGTTAT
TCATTGAATGGCATTCAACTGAAGAAACCGCCCTCCCCGCCAAAGAAGGC
GTTTTGATTGAAGAAATTGATGATATAGAATTTGAACCTCACGTTAACGA
TGATGACGTAATTATAACCATGGTTCGATATCCATTACCAAGTTGGTTAC
GACGTATCAATACTTTTGATAACCGTCACGAGTTACCGTGTCATTTGAAA
CACCTCAGAGCCGAAGATTTTCATCAAGCTTGCGGAGAGAGTAACGTGTT
GCCTATTCACACTTGTGATCCCTTGACTCGAGTACCTGATCATTTGAAAC
AGCTAAGACCAGAAGATTTTCATCAAGCATGTGGTGAAGCCAATGTGATG
CCAGTTCAGACCTGTGATACGCTGACTCGAGTCCCATCATGGATGCGACG
TCTTGATGTGGTAGAGTCACGTCACGATAAAGAACACGCACCAACGGTAC
GCATCCCTACCTGGATGAGGCAGTTGCGTGTCAATGATGAGGAGATGGGA
GGCTGCTATCGGTTACCTTCATGGATGAACCGTATCAATGTTGATATTCC
GGACCCAAAACCAACCAATTGTGACTTGATTCAAACAGTAAGAGGGTCCA
ATTCTTGGTTCTCTACTACCGCTACCACAAGGTGGGTCTCCAACACTCGC
CCCAGGAAATGGATTCGTGCTTCATCAGAAACTGCCATCCTTCTGAATAA
TGCTCAAACCATTTGTAACAGTATGATCAATTTCGCTATGGTACTGGCTA
CTGCTACTTGTAAAGCGGCTGAGAAGACAGCTACTGATCTTTCTCTCTCC
AGTCCTGTACCCAACACCATTCAAGCCAGCGCATGTGCTCAGAAAAAGAA
ACGTGTTTTATCACAAAGTTCATTATCAGCTAAACACCTTGCTACGAAGA
GTGCGAAGAAAAATAAGAAATGGTTAAGTAAAGTTAACAATGTGAAGAAG
ATTCAAAACAAACGTGACCAACGGTACAACGCGAAATCTTTCAGTGGAAG
CAAATGCGTACGAGCTTGTTAAATGTATTCCTGGGTCGCCTCATTTTTCA
ACGAAGATTCTACCAGCAACACTACCTTGTACGCTGATCAACTGATCGCA
CAACAAACAGGTCAACAACCAAAGGAAGAATGGACCTGGATCGAGCTCAT
TGATGATAAAGAAGAAAACGGTCTCATCATTGTACAGACGGACGAAAGTG
TCCGCGCGCACAACCTCGAAACAGAAGATCCCACGCCTTCCAAACGTAAG
CGGCCGATCACAAAACGCGATGTTCTCGCGCGTAAAACTTTCAGGCGATC
TTTACATACTGACCGCCCTCTGATGAGTAAACCACGTCCATCTACCCTCC
GAAAGCTCGCCAAAGCTGGACCATTAGATGTTCAACTACGTAAATTCTGT
AAAGTTCAACAGACCACTTCTGAAGTGCTGTCTGCAACCTTTCCAACATG
TAATTTATTCAATATTGGTACCAATACACAATTTGATTGCGATATCTCAT
ACCTGCTGAATAACACAACGTTCTTAAAGTGCGTCCTTGAAGGAATTCTC
AAAGAAGAAGTCATCCTAGACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009978XLOC_009978Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017801-proteinTCONS_00017801-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017801-exon-sc0000276-1575043694:220575..221850TCONS_00017801-exon-sc0000276-1575043694:220575..221850Clytia hemisphaericaexon
TCONS_00017801-exon-sc0000276-1575043694:211297..212848TCONS_00017801-exon-sc0000276-1575043694:211297..212848Clytia hemisphaericaexon
TCONS_00017801-exon-sc0000276-1510915933:220575..221850TCONS_00017801-exon-sc0000276-1510915933:220575..221850Clytia hemisphaericaexon
TCONS_00017801-exon-sc0000276-1510915933:211297..212848TCONS_00017801-exon-sc0000276-1510915933:211297..212848Clytia hemisphaericaexon
TCONS_00017801-exon-sc0000276-1491911889:220575..221850TCONS_00017801-exon-sc0000276-1491911889:220575..221850Clytia hemisphaericaexon
TCONS_00017801-exon-sc0000276-1491911889:211297..212848TCONS_00017801-exon-sc0000276-1491911889:211297..212848Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000276supercontigsc0000276:211297..221850 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0270926 0.0396293 0.0306756 0.0300113 0.310555 0.25984 1.27136 1.35328 9.37188 4.94885 6.34059 4.82664 10.5408 8.86964 3.49987 8.99766 86.9564 15.8013 2.0016 1.03973 47.5564 42.5852 7.62617 9.77157 19.2854 24.5975 0.52009 0.356821 0.105247 0.0306372
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017801 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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