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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017889 ID=TCONS_00017889|Name=TCONS_00017889|organism=Clytia hemisphaerica|type=transcript|length=897bp
GTATTTTCTAAAGCAACTTGATGACATAACTCAGTTGACTCGGTTgggtt
tattttttaaaaactcaTTTATTTACAACAAAACTACAAAGAACGAGAGG
TAGAAACCAAAAATAGGTCGTGAAAATTTTTTACcataaatacaaaatac
aaaTAATGTTGTAATGCACTATAAAAAGCGTAGCAACCTATTAGCTCATC
AGCCACGACCCCAGAATTTGACATTTCGGCTCCGGAGAAGGAAGTAAGCC
TAAGATGGTTTTAGGGTATCATAGTTATGGAATTAGTCGGGTAGACTGGT
TTCTAAGAGTGTCCAGACTACACGGTTCAGTACGGGCCAGCTATTTCTTT
GAAATTAACTAAAAAACACAACTCACAAACGTTGAAAGTAAAAATCCAAA
GTACATTGAGGGAACTTACTCTGGCGAATTTGGCGAGTTGCATTTTGCCA
AAATAACACCTAAGATTCGTCgaaattgcttaaaatacgGCAATATGGGA
CTGATTTAGCCtgtcattcgctaaaattagtttTCCCCGAAATCAAAAAG
TTTAACCTTTTGCGCCAAAGTAAGTTCCCTCGATGTAGTTGTCACaacaa
cgatgtaaaaataatagataaccaactNGGACTGATTTAGCCtgtcattc
gctaaaattagtttTCCCCGAAATCAAAAAGTTTAACCTTTTGCGCCAAA
GTAAGTTCCCTCGATGTAGTTGTCTAAACATCACAACAACGATGtcaaaa
taatagataaccaacttgccttgattctcaaaaaacatccgtgtttcggt
tgtaaaaatattaatgacattttgcatcgtaaaaagtgcaattaaataaa
aacttgcttcatttgcaaccttctattggacagaatcgatcacgtga Run BLAST on NCBI transcript from alignment at sc0000278:57588..58484 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017889 ID=TCONS_00017889|Name=TCONS_00017889|organism=Clytia hemisphaerica|type=transcript|length=897bp|location=Sequence derived from alignment at sc0000278:57588..58484 (Clytia hemisphaerica)
tcacgtgatcgattctgtccaatagaaggttgcaaatgaagcaagttttt
atttaattgcactttttacgatgcaaaatgtcattaatatttttacaacc
gaaacacggatgttttttgagaatcaaggcaagttggttatctattattt
tgaCATCGTTGTTGTGATGTTTAGACAACTACATCGAGGGAACTTACTTT
GGCGCAAAAGGTTAAACTTTTTGATTTCGGGGAaaactaattttagcgaa
tgacaGGCTAAATCAGTCCNagttggttatctattatttttacatcgttg
ttGTGACAACTACATCGAGGGAACTTACTTTGGCGCAAAAGGTTAAACTT
TTTGATTTCGGGGAaaactaattttagcgaatgacaGGCTAAATCAGTCC
CATATTGCcgtattttaagcaatttcGACGAATCTTAGGTGTTATTTTGG
CAAAATGCAACTCGCCAAATTCGCCAGAGTAAGTTCCCTCAATGTACTTT
GGATTTTTACTTTCAACGTTTGTGAGTTGTGTTTTTTAGTTAATTTCAAA
GAAATAGCTGGCCCGTACTGAACCGTGTAGTCTGGACACTCTTAGAAACC
AGTCTACCCGACTAATTCCATAACTATGATACCCTAAAACCATCTTAGGC
TTACTTCCTTCTCCGGAGCCGAAATGTCAAATTCTGGGGTCGTGGCTGAT
GAGCTAATAGGTTGCTACGCTTTTTATAGTGCATTACAACATTAtttgta
ttttgtatttatgGTAAAAAATTTTCACGACCTATTTTTGGTTTCTACCT
CTCGTTCTTTGTAGTTTTGTTGTAAATAAAtgagtttttaaaaaataaac
ccAACCGAGTCAACTGAGTTATGTCATCAAGTTGCTTTAGAAAATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017889-exon-sc0000278-1491911889:57588..58484 | TCONS_00017889-exon-sc0000278-1491911889:57588..58484 | Clytia hemisphaerica | exon |
| TCONS_00017889-exon-sc0000278-1510915933:57588..58484 | TCONS_00017889-exon-sc0000278-1510915933:57588..58484 | Clytia hemisphaerica | exon |
| TCONS_00017889-exon-sc0000278-1575043694:57588..58484 | TCONS_00017889-exon-sc0000278-1575043694:57588..58484 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000278 | supercontig | sc0000278:57588..58484 . |
Blast
The following BLAST results are available for this feature:
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