|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017948 ID=TCONS_00017948|Name=TCONS_00017948|organism=Clytia hemisphaerica|type=transcript|length=1250bp
CCTAAACAATCCCAAacagcaaaacccccggaaaatttaaaatgtcggaa
tgagcaatagccgatcacattttggaggtttgtcttttatgttttcCAAA
ATGGAATTGTCAGGGTATGGAAAGTCATTTTCATGAAGGAAAAAGTAGCc
atatattttgaaatcaaGGTAAGTGACTTGCTTGGAAAACTGAGGATGAA
AACTCCATTTCCATTACAACAATTATAACACATGAAGGCAGTCTTGGTct
aaacattaaaaaagcagggtagcctaATTGGGCTTGGTTTTGGGGTACCC
CcgttttttgcccaaaattcTGAAGGCTAATGCCTTAAACCACTTAAGTT
GTGAAAATACAATATATATCGAGTCATCTTTGAAAGAAAGTACTGAAATC
TACTTCTGTTTATTGGGTGGAGTCACAGAATGTTGCCATGTTTCAAAATT
CTGAATGTGAGAATGTGATACGGTCATCTGCTCCAActtaacttgggact
atcttacgcaacattgGACGGCCATTctaccaccatttcaccgaacctcc
aaagtcctTTGATTTGAGTTcaatgaaccgcgtattaaaaaatacacgat
ttccctttagtaagtgaaaatacagaccagatatgcaacacaacagtccc
atgtttcgaccaattgtcccaagttagagcagttgacgttACCAATGACC
AAAGTAACAGATAAAACTTTTTACctaagtggattaaatttttcatggat
taatttttgcattttcacAAATTCTTTGTGAAAATTAGTCAAcgttaaaa
aatctcaaatctcaaaattggtcaaaacctctagaaaaacaaagaaatag
gGTGAAAAAGAGGTCGCTTCGTGAAATTCTAGATTTTGCCTTTGCCAAAG
ACTTTTCAAAATTCCCAaggcaataaaaattttttgttatgaAAGGCAAA
AATGATAACATCTACATTATTCCAAAGAGCAATTAGAAATGACAAACTTT
TCCTCTTTGTTTCGAACGTgctatttttatcaaaacaatcagGAACGACA
AATTGTCGTTTTGAATGCGGGAAAAAATACTAGGAATAGGATCTGATTGG
ATGCGATAAACGAGCCGCAACGagagtagcctggatatccagcccgtaaa
cttttttttgattttgatatttcttatgtttacggtctggtttatcTAGA
TTGTCTGCATTCTGATCTGAGAATGATTATGTGGATATTCTGGTTGGTtg Run BLAST on NCBI transcript from alignment at sc0000279:940..2189 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017948 ID=TCONS_00017948|Name=TCONS_00017948|organism=Clytia hemisphaerica|type=transcript|length=1250bp|location=Sequence derived from alignment at sc0000279:940..2189 (Clytia hemisphaerica)
caACCAACCAGAATATCCACATAATCATTCTCAGATCAGAATGCAGACAA
TCTAgataaaccagaccgtaaacataagaaatatcaaaatcaaaaaaaag
tttacgggctggatatccaggctactctCGTTGCGGCTCGTTTATCGCAT
CCAATCAGATCCTATTCCTAGTATTTTTTCCCGCATTCAAAACGACAATT
TGTCGTTCctgattgttttgataaaaatagcACGTTCGAAACAAAGAGGA
AAAGTTTGTCATTTCTAATTGCTCTTTGGAATAATGTAGATGTTATCATT
TTTGCCTTtcataacaaaaaatttttattgcctTGGGAATTTTGAAAAGT
CTTTGGCAAAGGCAAAATCTAGAATTTCACGAAGCGACCTCTTTTTCACc
ctatttctttgtttttctagaggttttgaccaattttgagatttgagatt
ttttaacgTTGACTAATTTTCACAAAGAATTTgtgaaaatgcaaaaatta
atccatgaaaaatttaatccacttagGTAAAAAGTTTTATCTGTTACTTT
GGTCATTGGTaacgtcaactgctctaacttgggacaattggtcgaaacat
gggactgttgtgttgcatatctggtctgtattttcacttactaaagggaa
atcgtgtattttttaatacgcggttcattgAACTCAAATCAAaggacttt
ggaggttcggtgaaatggtggtagAATGGCCGTCcaatgttgcgtaagat
agtcccaagttaagTTGGAGCAGATGACCGTATCACATTCTCACATTCAG
AATTTTGAAACATGGCAACATTCTGTGACTCCACCCAATAAACAGAAGTA
GATTTCAGTACTTTCTTTCAAAGATGACTCGATATATATTGTATTTTCAC
AACTTAAGTGGTTTAAGGCATTAGCCTTCAgaattttgggcaaaaaacgG
GGGTACCCCAAAACCAAGCCCAATtaggctaccctgcttttttaatgttt
agACCAAGACTGCCTTCATGTGTTATAATTGTTGTAATGGAAATGGAGTT
TTCATCCTCAGTTTTCCAAGCAAGTCACTTACCttgatttcaaaatatat
gGCTACTTTTTCCTTCATGAAAATGACTTTCCATACCCTGACAATTCCAT
TTTGgaaaacataaaagacaaacctccaaaatgtgatcggctattgctca
ttccgacattttaaattttccgggggttttgctgtTTGGGATTGTTTAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017948-exon-sc0000279-1491911889:940..2189 | TCONS_00017948-exon-sc0000279-1491911889:940..2189 | Clytia hemisphaerica | exon |
| TCONS_00017948-exon-sc0000279-1510915933:940..2189 | TCONS_00017948-exon-sc0000279-1510915933:940..2189 | Clytia hemisphaerica | exon |
| TCONS_00017948-exon-sc0000279-1575043694:940..2189 | TCONS_00017948-exon-sc0000279-1575043694:940..2189 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000279 | supercontig | sc0000279:940..2189 . |
Blast
The following BLAST results are available for this feature:
|
