TCONS_00017977 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017977
Unique NameTCONS_00017977
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1455

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017977 ID=TCONS_00017977|Name=TCONS_00017977|organism=Clytia hemisphaerica|type=transcript|length=1455bp
GATTCATATCACATGATGAGGTGCTTCTGGTTCCACAATTAGCCGATTTG
AAGATGAATTTGGAGCAAGTGGATGACATGTTTTTCATGCTCAAAATGGA
CCAGAATAAAGATGGAAAAGTCGAGCTTAATGAACTGAAGAAGATCGATT
TATCTTCCATTGGCAATTACGTCACACAATTACGTCATGATCCATCACGA
TTACGTAATGTGACGGTCGAAAGTGGTTGGGTATGGGCGGATGAAGATGA
TTTGTTGAAATATGAAAAGAACGGATATTTTGAAGACTATCACGCCAGAT
TATCAACATTAACAGAAGTCCCGTCCATCCTCTGGGAAATGAGCGAACCG
CTacaaatccgccattatggagcaTCACAATTCCAAACACATCGCCATGA
CAGCGAGGCACCAAACAAAGACATCCCATGCTGTCTCTATGGTGATCAAG
ACAAAAAATGCCGCGTTTGCAGATATCTTTCTTTCACCATGTTCTTGAAC
GATGTCGAAGAAGGCGGTGAATTGGTTTTCCCGCTCGCCAACAACCCCTT
CAAAGACATCATGAAAAATTCTGGTGAATGGCATGGCTATTATCTATACT
CCAAAACCACAGGCAGTAGAACATTTTTCACCGTCGACATGCATTTCACA
CCAGGAGAAAACGACAATGGAACTTTCAATGCGTCTGGACGTGAAAATGG
TGGAGAGTTCGTGTTCCGTAATGCGGTAATTGAAGGAGAAAcggtgaaat
ttgaaaaagtttacaaacCATCCGAAGCTGAAGAGACTGGAAACGAACAA
GGGATTCGTTACCATGGAAAGATCATTGAACAGACACAAATCATGGGATA
TTGGTGGGTTCCTGGCAATCAACGAATGAATGGCCGTTTCTTCATGTGGA
ATCGAGAGTTTGAGATTTACTCCGCCCGCGCGGTCGACCAATCAAATCGA
AACGAAGGTTGTTTGAAAGCTCCTTTGAAAATCAAACCGAAAAAAGGAAA
AGCTGTTTTCTGGTACAACCATCATTTGAACCCCCTGAATGATATGGTTG
GACCTTTAAATCATGAGGCGATTTTCGCACATTGTGAAGTGAACCAAGGG
GTCAAATGGACCGCGTCTGGTCGGCTAAATATCATCGGAGATGGAGAGCT
TAAATTACGTACGTGGAGAAGAGGAACTAATTTAATGCATGACCGGAAAA
AAATGCGGAAAATTTATCAGCGGTTAGGAACGAACGAACCAAAGCGAGAA
ATCGAGGAATACGAAAAAGACTTTTATGAAGAAATTCACGGTAAAAAAAC
TGGGAATGATTCTGCAAAGGATTCTGGGTATAAATATAAACAATCGAGTA
ATGCATTGCAAGCGTTGAACCTGTTGGTGAACGATTTATCGAATGAACAA
TTATCCATAATGGCAGCCAATGTGCATCGCATTTTAGGCCTGCAGTGTAT
GTAAG
Run BLAST on NCBI

transcript from alignment at sc0000282:122679..135334+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017977 ID=TCONS_00017977|Name=TCONS_00017977|organism=Clytia hemisphaerica|type=transcript|length=12656bp|location=Sequence derived from alignment at sc0000282:122679..135334+ (Clytia hemisphaerica)
GATTCATATCACATGATGAGGTTAGTTTTGATTTCTCCCTCCGAAGAAGA
ATCTCTTAGTTAAAAGTTTTTGTATAAGGTTGCAAGTAAACTCCTACTTT
GGGATTATAATCAAGACAGATTCATATCACATGATGAGGTTAGTTTTGAT
TTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTTCCGTAAAAGGTTG
TAAGAAAACTCCTACTTTGGGACGGATTTTATATCACATGAtgaggtttg
ttttgatttctccCTCCGAAGAAGAGTCTCTTAGTTAAAAGTTTTTGTAT
AAGGTTGTAAGTTAACTCCTCCTTTGGGATTATAATCAAGACGGGTTCAT
ATCACATGATGAGGTTAGTTTTGATTTCTCCCTCCGAAGAAGGGTCTCTT
AGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTA
TGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCT
CCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAA
CTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGATGAGGT
TTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGT
ATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTC
ATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCT
TAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATT
ATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTCTCCC
TCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAA
ACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGATGAGG
TTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCG
TATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATT
CATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTC
TTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGAT
TATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTCTCC
CTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTA
AACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGATGAG
GTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCC
GTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGAT
TCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCT
CTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGA
TTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTTCTC
CCTCCGAAGAAGGGTCTCTTagttaaatatttttgtataaGGTTGTAAGT
AAACTCCTCCTTTGGGATTATAATCAAGACAGATTCATATCACATGAcga
ggtttgttttgatttctccCTCCGAAGAAGAGTCTCTTAGTTAAAACTTT
CCGTGAAAGGTTGTAAGTAAACTCCTTCTTTGGGATAACTTCAAGACGGA
TTCATATCACATGTTGAGGTTAGTTTTGATTTCTCCCTCCGAAGAAGGGT
CTcttaattaaaagtttttcgtATAAGGTCGTAAGTAAACTCGCATGATC
TCTATGCGAAGGTCTCTTTTTAAAGGttatcaataactcttgatgtCCAA
GTTAGTAATTTTTCACTGCGAagaagggtaccttttttaggGAAACttta
caccttttcgactgtagtcgcgcggtcaggtgcgTGCCACTATATTATTT
AATTACCCCCCAAATCAATCCAATCCTTCTTTTACACCTTTTTTCTGTTG
TCCATAGGTGCGAAAAAATGACTAGGACTGTTTTAGGGTGGTGAaaagga
caaaaaatgcccacgtggcaattggcggctacggtcgaaaaggtgtattg
cgtCCCTCACACGACTTAAGGtttaatctcaaaattaataccttatgaaa
tttagagttttactgtggtggtcatctttgagattgagattgcccttttt
tcatgtagaggaatagtcgatgttttcatatgacaaaaaggccaatctca
aaggcagaacaggattgcaagatttccaattttccaagacacttattttg
agattgaacctttagttAGCCTTTACGAATGCCCTCAACagatattgggc
ttttccagaaaaaaatcgtgcaccccctgttgaggaggtccatttccgtt
ccaagggggtaaggtttgaaatgtagtggaattccataagggtagacgaa
aatccgtcaaaaataagcggaattccaagggggtaatgattgaaaatttg
taaaaattcggaattccagaggggtttgaTCCTAAAactgcctggaattc
caagggggtaggtcacaaaaggttgaacctcctcaacagggggtgcacgg
ttttttcctggaaaagcccagctggaaagaaaaaactttgttttaacGGC
TATACAAAACAAACTTTTCCACAGGTGCTTCTGGTTCCACAATTAGCCGA
TTTGAAGATGAATTTGGAGCAAGTGGATGACATGTTTTTCATGCTCAAAA
TGGACCAGAATAAAGATGGTAAGATTACTAGCTATATTGAGAGAAGAGTT
TTACACATCCAGTTTCCTGGTTATCCAATAGCAACTTTTCTAATTTTGTG
AGTATAAATTTCATAGGGTGGTGAATTATACTGGAAAGAAATAAAGCGGT
CAACTTCTCTGCTAGATGATGTTAGGTTAAGCCTGGGATTAAGGGTGTAG
GACAGTTGTAATTGGGCGTaatcagctggcacacaacgttgcttcaacgt
tcatctaacattatatggacgttgggaACATCATATAAACGtcgaaagaa
cgttgtgtgtcagctgggtaatcaaaacaaatcaaaacttgATCTAATTT
CTATCAATATAAAGACCAGCAACATTTCAAGATGGTGAGCATCAAAGATt
acatcccagctggcacacaacgttgtttcaacgtttatctaaatgttata
tggacgttgtgaacgttagataaacgttgaaacaacgttcataaaataca
cttttttcatTCAGGAAAAGTCGAGCTTAATGAACTGAAGAAGATCGATT
TATCTTCCATTGGCAATTACGTCACACAATTACGTCATGATCCATCACGA
TTACGTAATGTGACGGTCGAAAGTGGTTGGGTATGGGCGGATGAAGATGA
TTTGTTGAAATATGAAAAGAACGGATATTTTGAAGACTATCACGCCAGGT
AGGTGATGAGTACCtaaccaaaaaccgggatttttcattccgCTTTTTGG
TGAGATAAAGCCTATACTAGACGGTATGGCTTTTTTTCTGCGCAGTagcg
tctattccactttgctaTTCCACTTtgtgactttttcgaatgtttggagc
tcaacttttctagatccaaacattcgattttttttgccgtcactttaaac
tttcgaaCCTCTTGCTGTAGGGGAAAATATAATTTACTTCAGAATACTTA
AAAGGCTTCTTTCACTAGAATTAAAGGCCGTTACATATCATCATCATTGA
cgagcaatgatgatgatgatttagGGTAGCCCCAATCGAAACCTAAAAAC
TTGTGGTGTCGGAAGGCAAAATTAGATTCAGTAGATTCATCCAATGTATC
TTGTGTTTAGATTATCAACATTAACAGAAGTCCCGTCCATCCTCTGGGAA
ATGAGCGAACCGCTacaaatccgccattatggagcaTCACAATTCCAAAC
ACATCGCCATGACAGCGAGGCACCAAACAAAGACATCCCATGCTGTCTCT
ATGGTGATCAAGACAAAAAATGCCGCGTTTGCAGgtaggttttattttta
tattagaTCTAAACTTTCCGCTATGCTTTTCAAGGCTGTAagcattgagt
ttgaagcccagAAGTGGCTAGAGAGtaatctttaacctttcctaAGGTGA
GGCTTATTCAATTTGTTGTTTAAGCTACCAAAAAAAGAGGGTTGTttggt
cggcgaaaaaataaaaataaaagtagaatttcacctataaaatctccaCA
AAAAGCAGCAAAAACTACTTCCTCTTGACAAAAAtgtgaaatagaaaata
aaaagacacaaaaaggttGAATACatggatgaaatgaaaaatttaacata
aaattctcaaaagcttggaaaaactaccaaaattttgaaaatttgtgagT
CTGATCTTTTGATTCAACATTAAATCATCGAACAAACACAATGTCAAATT
CAGTCTCTTTATTcgcgttgtttttttttcaaaaatccctAAAAATGACC
CTTTTGACCTTTTGATGACGTTATAATATTTCATGCaccattttagaatt
ttgatGTAATTGGTGCCTATAATGTGGATATATTTCAAGGACATTGGACT
ACCCTGCTAGAAATCATTGAAGGGGGTTTAATGTCCCCccccccaggggg
gggggggggggggggaaaaaaatttttaaaaaaaaaattttttttttaaa
aaaaatttccccccccccccccccccccggggggggggggtggaggcgAA
ATGATCTTATAATCAAGAACTTCTCATTTGAAAACGCCTATCAAAAACTG
AATCTCACTTTGGTTCAATGTtgacaaagaaaaatatatttgaaaaataa
gattaattaaaattacaataaaatAGTTAATTAAACTTTTGAAGGCAATG
CATTCAGGTAAAAATAGCCttctgtttttttgtttgtttttatttccaaT
AGTAGGAAAAGTCTGGATAATTCTTCTCATATCTAATTATCTGATGCCAT
TACTCGTGGGTGGGGAAAAACCATACAAAAATAACGAGTTCATTTCTGTT
GGACGTGCAGATGTGCATTTGAAATATTACAGTCGTTGCCTTGGAAACGG
CTAACAAACTTAACTTACTGGTAGACATGAATGAAAACAATAGCTGATTT
CAAATCGCCGTAAAAAAAATCTTCAGGAATATCTTTGTAAGACCATTGTT
CAAAAGTGTCACGTTTGTTAATTCTTACCATTTGTGCGCATTTATTTGAA
TCGGTAGGGTGGAGCACAGAAATGGTTACATTCTCCCATAGGCTTTTTGG
GAGCCCTTGAACCATAAATAATCGTTTTTGTTCCAACATAAGGCACGTGC
TCAAAACTAAACCCAAGTAATCTTTACACTCTTCAAATTCCTTCTTCATA
AAGGAGAATTTTTTCGTTCTGTAAAGTTCTTTGTTCCCCATAAAGGAACT
TATATTTTCATACCATTCCTTATACGAGGGGTACAAATCAACCCGTTGTG
TTATGTTTCCTTCAAAAAACATCTCAGCTCCCCAAACAAGTCGACCTAGC
TTAGAAACAGGAGGATTTTGTGCATCATTTTGTCCCAGCTTTATTTTAAG
CAACTCAATTTTATGTTTTAGCGTTTGAATTTCACCCTCCAAAGCACGAT
TAACTGCAGCTTGTTTTTGGTCTACTTTTAGTTTAATAATTTCTTGGTCA
TGTTTGAgattttggatttctttttccATCTCTAAACACTTTATCTGGTG
tttcagattttctttttccttgtCTTCTCTCAACTTTGCATTTTCTTGTT
TAAGtctttgaatttcttccctCGGATCCATTCCTCGATCGACTGCGCAG
TGTGCTTCGTTCATTGTGATTATGATTAAAGTTTCTCCACTTTACTTTTT
TACGTACAACTTTCACTTCTATCTAAATTATCGTCAATCATGAAAAGTTT
TCGATATCAAAGGTTCAAACCCCCCTATGTTTAAAAAATCTACAACTTTC
CTGTACATATAATGAATTGTGTTTTCAAGTATATTGGCTAAAAATGCCTT
CtaataccactatttattacctATTAAATACAAAATTAATCTTTCAATac
cattattttattttatttgttatcTAATTAATGTGCATTTAGCATCGACA
AGTATTTTGAGTATTTGTTATTAGAAAATGTATGGTTTTCGATCcgaaat
tttttaacaaaatctagAACTAGAGTCGTTGTTGTATAAAAGATTATTTA
CTCGAAATCGATTTTTTCCAGAGCGAAGCCTCACTCAGAtatgaacaatt
ttataaaggACCACGAGGCTGAAGTTTTGCAGAAACTTAAGAACATTCTG
AACGACGAGGCTTAAGTTTTGCCGAAACTTAAGAACATTCTGAACGACGA
Attataaagttttaaaataagaaatcgaaataataagaacaagtgaggtt
aagtcaaaattttcaaaatttaatccaGTTCATCTGATTTCCACTCATAG
ATATCTTTCTTTCACCATGTTCTTGAACGATGTCGAAGAAGGCGGTGAAT
TGGTTTTCCCGCTCGCCAACAACCCCTTCAAAGTGAGTTCAAAATGTTAT
TTTAATCCACAAGAGGATATAGAAGTCATTTGCTATGAAAGTTTGATTCG
AGGCAACCAAAAAAAATTGCCGATCCAGAAcactactctgatacaagagt
gtgggtgatatgccagacattgtggtgtgtggTTTTACTCATCCCGTTCT
GTGCCTGAGACGAGCTATATGCTCTCCCGCGTAGTCCAAGTGTCACCACT
ATACATCATGGTATCTGTGTCTCGCCTGCACAGAACCAGCGGTGTCTGGA
CAGTGCTATGCATTCCTACTTGAGAAAGGAGGAAGGAGTAGTATCCATTC
CCCGATGTGGAGGACTCTTATCATTGTATCAACAACTGCGAAAAAGTGTG
AGTCCACGCAAAATGGAAGCTTGGATGCTTGATAGGCTGTAGATCTAGAA
CGCCATCGCTTAATTAAAGTTGTTTGATGGTTGTTTTTTGAATACATTCA
ACTACCATTGATTTGTTTTCAGGACATCATGAAAAATTCTGGTGAATGGC
ATGGCTATTATCTATACTCCAAAACCACAGGCAGTAGAACATTTTTCACC
GTCGACATGCATTTCACACCAGGAGAAAACGACAATGGAACTTTCAATGC
GTCTGGACGTGAAAATGGTGGAGAGTTCGTGTTCCGTAATGCGGTAATTG
AAGGTATTTAAATGATTTTTAGGACTTTAGAGTTCACTTTgtcaacaatt
taaaaaaactagaccatagatttataaagcccgaagggctagatgtcctG
AGATGTCGTGCTTTTTGTCGTGAGGTtaagtaggaaatcctacctaggtc
acgtgatattacaatagaatttcagcgcttgaccaagaAGAAGCTCTGGc
agtcaagaacaccttcaaattagcctatcatagactgattagcctatcat
aggctatttagactattttatataggctatttagccgaaaatcgaNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TTTTCTGATAATGAAGTTCTGCTGAATCGACAAAAAGCCCGATTTTCTTA
CCCTGCGCATGCGCACGCATGCGCAGTaccaaaaagtggaatatttccta
aaccaaaactgacccaaagtcaaaatttgtcatgagcatttctctgacaa
tgagaaaccatgtattccttagagaagacgcgactatttatatttcgtca
taaatcgaggtttttatcgattttcggctaaatagcctatataaaatagt
ctaaatagcctatgataggctaatttgaaggtgtcctTGACTGTCTgggg
gttttcgaaaacaatagcagcaatattatttgcgatattcacttttttct
tttgcttggaagagcttaaagcacgacaccTAGCCCTTCGGGATTATTTT
ACGGGATTTTGTCGATGTTTTATCTTTTAGCtagaccactgacctttata
aagcATGGACAAAGCTATATCTACCATCTTTGACTACTCGATGTGGGGTC
AATTTatatttcaatgaaatttaCTGCGTTTAACAAAGGTTTCCACCCAC
CGAAAAACTCTGATAAAAAATTTGAGTGACTGTGTCCAAGCAATATAAAG
GTCAGTAAGCTAGACTCCTTTGTAGTGTAGTCTTGAACAACTTAAActaa
caaactttaaacatactgaaatgaaaatcaaaatcaaaaacaacaaactt
tGTCTCTTTATTGTGTTATATTTTCACCGGGATTTTCGCTTCCTTGACGT
TAGAAAAATGGCGTCTGAAATATATTGGCAAAAAGTGAATTCGTCTCGAT
TTCATGCAAAATTCTGATGCTATTTCGTTTGAAACTTTTGCCTGTGGCAT
TTTCAAATTATATCACCTtttcttttaacattttcttttaacTGTCCCTT
CAACATTTTGACCATTTCTATCATAGACCGTTTCACGGTCGAAATGAATT
ATGGGTAATCATGACTGATTAAATCAACGACTTCTCTTTAACACAATCAG
AATTTTAGAGCAGCGCAACAGAAGGATGCAATGAAACGCTGTGGTCCTAC
TTACCCATGATTCCTTCGACCGTGAAATGACGTATATAAGTAAGTCCGAT
TGGGAAATAtagaccacagatatcttataaaacactagataaagCTACTC
TATCCTGCTTTACCAAGCTAAGGAGGGAAGCAAAATAATACGCCATCTTT
GCTGAGAGTAGGTCACAGTAGAAGCCCAGGTTTTCACTGTTGAAGTTTTT
TTGActctgcaatgacttcaaaatttcaaggatcGCGCAAACGAAATTGT
GACGTCAGTTTATTCAAGATAGCGCGTCATTTTGCTTCAAATAGGGATTA
AGAGGAAACTCTATCGAGTgctttatataagatatctgtggaaGAGACAG
GATCTCCCACTTCAAGGACATTCTTCTTTCGCATCTAGGAGAAAcggtga
aatttgaaaaagtttacaaacCATCCGAAGCTGAAGAGACTGGAAACGAA
CAAGGGATTCGTTACCATGGAAAGATCATTGAACAGACACAAATCATGGG
ATATTGGTGGGTTCCTGGCAATCAACGAATGAATGGCCGTTTCTTCATGT
GGAATCGAGAGTTTGAGGTACGTCTTttacgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttctcAGCTCTTCTTGGAGgaatattg
gaaagatattcccaattcaaaatttcgtgtcattataagcattttgtttg
attttactcgtctgatgatttttttctcacacaccagatttcataactGT
GTCCGTTTGGTATTCTGGCAttattgttttcaaacttttggccagcaaaa
gtacgaatagaaaaagttagagaactttttagaaataagagtatttatca
tttttcaaaatcagagtccttcgagccgccatgacagttgtcctttgcgg
acaaagcctgtacattgattgttttctgaaacaatagaaagacaatactt
cgctctccagtttcattcgatgtttatccagagtctctataataaatcca
tgatgTGACGAagcctaatttttgaaaaagaaaaattcttggTTCCCACA
TTTTCTCAAGGCCTTATTTATCGGTAGTTtagctttctctgaaatttaAC
CTGTGGAGACGGACTATAAGAATTTCATTGCGCATGTCTCAATCATAAAT
GACACGACCTTCAACCAAGATTCTGGGTGATTCCCATGGCAACTTTTGTC
TTCGTTAAATGTGCTTTGAAAAGAATATCTGTCGTCACAGTgtacttttt
ttcttctatttggttgagtcgcaggaggctttgaggcccattttcgcaac
tatagacgctttcaattNATTGAGTCGCAGGAGGTTTTGATGCCCATTTT
CACAACTATAGACAGATAGACGCTTTCAATAAGctccccgtcagcacctt
gaactaactacccaattcccctcacatggcatgggttgacccgggcgaag
gttcattcacttgccaagtgaaccgctgcgagtgggaatcgaacctcagt
tgcctgtgcagcaaccaaggtcaatgaccactataccacagcgcctgtAC
AATTCACACACTGTGAAGCTCATTATGCTAAATCAATTTCTTAATTACCA
GTATGTGCACAATTTactatcattaaaaaaaaattaaatccgcTTTTTTG
TCAGCCATAGTTTCCTCCCCCTTTTCTGCTAGGGGGGGGGGGGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggattttttgg
aaactttttgccaaagaaggggggggggagaaaaaaacatatagtctgaa
tcacagacctctatagatataggTACTTGCTATAAGAAATCTTTTCGATA
GAGGATGAGCATAGGCCTGACCTTCAAATAGACCCTGGAGGCAGTTTTTC
GGCcctggccaagcaaaatctttagATCGGGGTTTCTTTGAAAGGGTACc
ttaccctaatggtagcactattAGTATGCATCGATACTACTTGTGATGCA
GTGCTACTTCGATAGTTTCTGTATGTGGCTCCcacgcaaatttttttccg
tacatggaAAGTATCATCGAtggtcgggagtatctcatattttttgtttg
gttttgttgtttggaattgcttaggtcagggttgctagtaacggctcgaa
tttcagtcaggttaaaaaaggggcaattttacccatattataataacatt
accccgtcttttttgtcattataTAAGTATTTCCTAATGttgtgttctgc
tgtgcgagtgtggctcaacggatagcgcgctgggtttctgatcagaaact
ctttcatttggtgggttcgaaccccggtcgggtctatatttcaaggttta
agataagtttaagatactccggcccgtcgatgatactcccgaccgtcaag
atgagatactcccgaccatgtacggaaaaaaatttgcggcTCCCACTTTT
AAAAAAcaccaatcaaagatggcgcatAAAGCTCTGTCCATGATTATAAA
GACCAGTGTTGTCATCCCGTTTAAAATGATACCGTTAATCATATTATTTA
TGCCCCCTTTTTCAGATTTACTCCGCCCGCGCGGTCGACCAATCAAATCG
AAACGAAGGTTGTTTGAAAGCTCCTTTGAAAATCAAACCGAAAAAAGGAA
AAGCTGTTTTCTGGTACAACCATCATTTGAACCCCCTGAATGATATGGTT
GGACCTTTAAATCATGAGGCGATTTTCGCACATTGTGAAGTGAACCAAGG
GGTCAAATGGACCGCGTCTGGTCGGCTAAATATCATCGGAGATGGAGAGC
TTAAATTACGTACGTGGAGAAGAGGAACTAATTTAATGCATGACCGGAAA
AAAATGCGGAAAATTTATCAGCGGTTAGGAACGAACGAACCAAAGCGAGA
AATCGAGGAATACGAAAAAGACTTTTATGAAGAAATTCACGGTAAAAAAA
CTGGGAATGATTCTGCAAAGGATTCTGGGTATAAATATAAACAATCGAGT
AATGCATTGCAAGCGTTGAACCTGTTGGTGAACGATTTATCGAATGAACA
ATTATCCATAATGGCAGCCAATGTGCATCGCATTTTAGGCCTGCAGTGTA
TGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010080XLOC_010080Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017977-exon-sc0000282-1491911889:122679..122698TCONS_00017977-exon-sc0000282-1491911889:122679..122698Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1510915933:122679..122698TCONS_00017977-exon-sc0000282-1510915933:122679..122698Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1575043694:122679..122698TCONS_00017977-exon-sc0000282-1575043694:122679..122698Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1491911889:125403..125496TCONS_00017977-exon-sc0000282-1491911889:125403..125496Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1510915933:125403..125496TCONS_00017977-exon-sc0000282-1510915933:125403..125496Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1575043694:125403..125496TCONS_00017977-exon-sc0000282-1575043694:125403..125496Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1491911889:125993..126176TCONS_00017977-exon-sc0000282-1491911889:125993..126176Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1510915933:125993..126176TCONS_00017977-exon-sc0000282-1510915933:125993..126176Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1575043694:125993..126176TCONS_00017977-exon-sc0000282-1575043694:125993..126176Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1491911889:126589..126762TCONS_00017977-exon-sc0000282-1491911889:126589..126762Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1510915933:126589..126762TCONS_00017977-exon-sc0000282-1510915933:126589..126762Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1575043694:126589..126762TCONS_00017977-exon-sc0000282-1575043694:126589..126762Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1491911889:129229..129310TCONS_00017977-exon-sc0000282-1491911889:129229..129310Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1510915933:129229..129310TCONS_00017977-exon-sc0000282-1510915933:129229..129310Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1575043694:129229..129310TCONS_00017977-exon-sc0000282-1575043694:129229..129310Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1491911889:129801..129981TCONS_00017977-exon-sc0000282-1491911889:129801..129981Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1510915933:129801..129981TCONS_00017977-exon-sc0000282-1510915933:129801..129981Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1575043694:129801..129981TCONS_00017977-exon-sc0000282-1575043694:129801..129981Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1491911889:132517..132695TCONS_00017977-exon-sc0000282-1491911889:132517..132695Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1510915933:132517..132695TCONS_00017977-exon-sc0000282-1510915933:132517..132695Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1575043694:132517..132695TCONS_00017977-exon-sc0000282-1575043694:132517..132695Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1491911889:134794..135334TCONS_00017977-exon-sc0000282-1491911889:134794..135334Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1510915933:134794..135334TCONS_00017977-exon-sc0000282-1510915933:134794..135334Clytia hemisphaericaexon
TCONS_00017977-exon-sc0000282-1575043694:134794..135334TCONS_00017977-exon-sc0000282-1575043694:134794..135334Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000282supercontigsc0000282:122679..135334 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0726311	0.0616002	0.0460132	0.039925	0.394624	0.376353	0.780784	1.35931	0.223345	0.153786	0.655312	0.41718	0.398106	0.345501	0.300971	0.624782	0.622087	0.532259	0.047528	0.0479718	0.364767	0.2377	0.169877	0.168515	0.31011	0.358521	0.0557429	0.0305707	0.107819	0.0887032
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017977 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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