TCONS_00017980 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017980
Unique NameTCONS_00017980
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1455

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017980 ID=TCONS_00017980|Name=TCONS_00017980|organism=Clytia hemisphaerica|type=transcript|length=1455bp
GATTCATATCACATGATGAGGTGCTTCTGGTTCCACAATTAGCCGATTTG
AAGATGAATTTGGAGCAAGTGGATGACATGTTTTTCATGCTCAAAATGGA
CCAGAATAAAGATGGAAAAGTCGAGCTTAATGAACTGAAGAAGATCGATT
TATCTTCCATTGGCAATTACGTCACACAATTACGTCATGATCCATCACGA
TTACGTAATGTGACGGTCGAAAGTGGTTGGGTATGGGCGGATGAAGATGA
TTTGTTGAAATATGAAAAGAACGGATATTTTGAAGACTATCACGCCAGAT
TATCAACATTAACAGAAGTCCCGTCCATCCTCTGGGAAATGAGCGAACCG
CTacaaatccgccattatggagcaTCACAATTCCAAACACATCGCCATGA
CAGCGAGGCACCAAACAAAGACATCCCATGCTGTCTCTATGGTGATCAAG
ACAAAAAATGCCGCGTTTGCAGATATCTTTCTTTCACCATGTTCTTGAAC
GATGTCGAAGAAGGCGGTGAATTGGTTTTCCCGCTCGCCAACAACCCCTT
CAAAGACATCATGAAAAATTCTGGTGAATGGCATGGCTATTATCTATACT
CCAAAACCACAGGCAGTAGAACATTTTTCACCGTCGACATGCATTTCACA
CCAGGAGAAAACGACAATGGAACTTTCAATGCGTCTGGACGTGAAAATGG
TGGAGAGTTCGTGTTCCGTAATGCGGTAATTGAAGGAGAAAcggtgaaat
ttgaaaaagtttacaaacCATCCGAAGCTGAAGAGACTGGAAACGAACAA
GGGATTCGTTACCATGGAAAGATCATTGAACAGACACAAATCATGGGATA
TTGGTGGGTTCCTGGCAATCAACGAATGAATGGCCGTTTCTTCATGTGGA
ATCGAGAGTTTGAGATTTACTCCGCCCGCGCGGTCGACCAATCAAATCGA
AACGAAGGTTGTTTGAAAGCTCCTTTGAAAATCAAACCGAAAAAAGGAAA
AGCTGTTTTCTGGTACAACCATCATTTGAACCCCCTGAATGATATGGTTG
GACCTTTAAATCATGAGGCGATTTTCGCACATTGTGAAGTGAACCAAGGG
GTCAAATGGACCGCGTCTGGTCGGCTAAATATCATCGGAGATGGAGAGCT
TAAATTACGTACGTGGAGAAGAGGAACTAATTTAATGCATGACCGGAAAA
AAATGCGGAAAATTTATCAGCGGTTAGGAACGAACGAACCAAAGCGAGAA
ATCGAGGAATACGAAAAAGACTTTTATGAAGAAATTCACGGTAAAAAAAC
TGGGAATGATTCTGCAAAGGATTCTGGGTATAAATATAAACAATCGAGTA
ATGCATTGCAAGCGTTGAACCTGTTGGTGAACGATTTATCGAATGAACAA
TTATCCATAATGGCAGCCAATGTGCATCGCATTTTAGGCCTGCAGTGTAT
GTAAG
Run BLAST on NCBI

transcript from alignment at sc0000282:123257..135334+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017980 ID=TCONS_00017980|Name=TCONS_00017980|organism=Clytia hemisphaerica|type=transcript|length=12078bp|location=Sequence derived from alignment at sc0000282:123257..135334+ (Clytia hemisphaerica)
GATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGG
TCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTG
GGATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATTT
CTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTA
AGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATGA
TGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGT
TCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGAC
GGATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGG
GTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTT
GGGATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGATT
TCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGT
AAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACATG
ATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAG
TTCCCGTATAAGGTTGTAAGTAAACTCCTCCTTTGGGATTATGATCAAGA
CGGATTCATATCACATGATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAG
GGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTGTAAGTAAACTCCTCCTT
TGGGATTATGATCAAGACGGATTCATATCACATGATGAGGTTTGTTTGAT
TTCTCCCTCCGAAGAAGGGTCTCTTAGTTAAAAGTTCCCGTATAAGGTTG
TAAGTAAACTCCTCCTTTGGGATTATGATCAAGACGGATTCATATCACAT
GATGAGGTTTGTTTGATTTCTCCCTCCGAAGAAGGGTCTCTTagttaaat
atttttgtataaGGTTGTAAGTAAACTCCTCCTTTGGGATTATAATCAAG
ACAGATTCATATCACATGAcgaggtttgttttgatttctccCTCCGAAGA
AGAGTCTCTTAGTTAAAACTTTCCGTGAAAGGTTGTAAGTAAACTCCTTC
TTTGGGATAACTTCAAGACGGATTCATATCACATGTTGAGGTTAGTTTTG
ATTTCTCCCTCCGAAGAAGGGTCTcttaattaaaagtttttcgtATAAGG
TCGTAAGTAAACTCGCATGATCTCTATGCGAAGGTCTCTTTTTAAAGGtt
atcaataactcttgatgtCCAAGTTAGTAATTTTTCACTGCGAagaaggg
taccttttttaggGAAACtttacaccttttcgactgtagtcgcgcggtca
ggtgcgTGCCACTATATTATTTAATTACCCCCCAAATCAATCCAATCCTT
CTTTTACACCTTTTTTCTGTTGTCCATAGGTGCGAAAAAATGACTAGGAC
TGTTTTAGGGTGGTGAaaaggacaaaaaatgcccacgtggcaattggcgg
ctacggtcgaaaaggtgtattgcgtCCCTCACACGACTTAAGGtttaatc
tcaaaattaataccttatgaaatttagagttttactgtggtggtcatctt
tgagattgagattgcccttttttcatgtagaggaatagtcgatgttttca
tatgacaaaaaggccaatctcaaaggcagaacaggattgcaagatttcca
attttccaagacacttattttgagattgaacctttagttAGCCTTTACGA
ATGCCCTCAACagatattgggcttttccagaaaaaaatcgtgcaccccct
gttgaggaggtccatttccgttccaagggggtaaggtttgaaatgtagtg
gaattccataagggtagacgaaaatccgtcaaaaataagcggaattccaa
gggggtaatgattgaaaatttgtaaaaattcggaattccagaggggtttg
aTCCTAAAactgcctggaattccaagggggtaggtcacaaaaggttgaac
ctcctcaacagggggtgcacggttttttcctggaaaagcccagctggaaa
gaaaaaactttgttttaacGGCTATACAAAACAAACTTTTCCACAGGTGC
TTCTGGTTCCACAATTAGCCGATTTGAAGATGAATTTGGAGCAAGTGGAT
GACATGTTTTTCATGCTCAAAATGGACCAGAATAAAGATGGTAAGATTAC
TAGCTATATTGAGAGAAGAGTTTTACACATCCAGTTTCCTGGTTATCCAA
TAGCAACTTTTCTAATTTTGTGAGTATAAATTTCATAGGGTGGTGAATTA
TACTGGAAAGAAATAAAGCGGTCAACTTCTCTGCTAGATGATGTTAGGTT
AAGCCTGGGATTAAGGGTGTAGGACAGTTGTAATTGGGCGTaatcagctg
gcacacaacgttgcttcaacgttcatctaacattatatggacgttgggaA
CATCATATAAACGtcgaaagaacgttgtgtgtcagctgggtaatcaaaac
aaatcaaaacttgATCTAATTTCTATCAATATAAAGACCAGCAACATTTC
AAGATGGTGAGCATCAAAGATtacatcccagctggcacacaacgttgttt
caacgtttatctaaatgttatatggacgttgtgaacgttagataaacgtt
gaaacaacgttcataaaatacacttttttcatTCAGGAAAAGTCGAGCTT
AATGAACTGAAGAAGATCGATTTATCTTCCATTGGCAATTACGTCACACA
ATTACGTCATGATCCATCACGATTACGTAATGTGACGGTCGAAAGTGGTT
GGGTATGGGCGGATGAAGATGATTTGTTGAAATATGAAAAGAACGGATAT
TTTGAAGACTATCACGCCAGGTAGGTGATGAGTACCtaaccaaaaaccgg
gatttttcattccgCTTTTTGGTGAGATAAAGCCTATACTAGACGGTATG
GCTTTTTTTCTGCGCAGTagcgtctattccactttgctaTTCCACTTtgt
gactttttcgaatgtttggagctcaacttttctagatccaaacattcgat
tttttttgccgtcactttaaactttcgaaCCTCTTGCTGTAGGGGAAAAT
ATAATTTACTTCAGAATACTTAAAAGGCTTCTTTCACTAGAATTAAAGGC
CGTTACATATCATCATCATTGAcgagcaatgatgatgatgatttagGGTA
GCCCCAATCGAAACCTAAAAACTTGTGGTGTCGGAAGGCAAAATTAGATT
CAGTAGATTCATCCAATGTATCTTGTGTTTAGATTATCAACATTAACAGA
AGTCCCGTCCATCCTCTGGGAAATGAGCGAACCGCTacaaatccgccatt
atggagcaTCACAATTCCAAACACATCGCCATGACAGCGAGGCACCAAAC
AAAGACATCCCATGCTGTCTCTATGGTGATCAAGACAAAAAATGCCGCGT
TTGCAGgtaggttttatttttatattagaTCTAAACTTTCCGCTATGCTT
TTCAAGGCTGTAagcattgagtttgaagcccagAAGTGGCTAGAGAGtaa
tctttaacctttcctaAGGTGAGGCTTATTCAATTTGTTGTTTAAGCTAC
CAAAAAAAGAGGGTTGTttggtcggcgaaaaaataaaaataaaagtagaa
tttcacctataaaatctccaCAAAAAGCAGCAAAAACTACTTCCTCTTGA
CAAAAAtgtgaaatagaaaataaaaagacacaaaaaggttGAATACatgg
atgaaatgaaaaatttaacataaaattctcaaaagcttggaaaaactacc
aaaattttgaaaatttgtgagTCTGATCTTTTGATTCAACATTAAATCAT
CGAACAAACACAATGTCAAATTCAGTCTCTTTATTcgcgttgtttttttt
tcaaaaatccctAAAAATGACCCTTTTGACCTTTTGATGACGTTATAATA
TTTCATGCaccattttagaattttgatGTAATTGGTGCCTATAATGTGGA
TATATTTCAAGGACATTGGACTACCCTGCTAGAAATCATTGAAGGGGGTT
TAATGTCCCCccccccaggggggggggggggggggggaaaaaaattttta
aaaaaaaaattttttttttaaaaaaaatttcccccccccccccccccccc
ggggggggggggtggaggcgAAATGATCTTATAATCAAGAACTTCTCATT
TGAAAACGCCTATCAAAAACTGAATCTCACTTTGGTTCAATGTtgacaaa
gaaaaatatatttgaaaaataagattaattaaaattacaataaaatAGTT
AATTAAACTTTTGAAGGCAATGCATTCAGGTAAAAATAGCCttctgtttt
tttgtttgtttttatttccaaTAGTAGGAAAAGTCTGGATAATTCTTCTC
ATATCTAATTATCTGATGCCATTACTCGTGGGTGGGGAAAAACCATACAA
AAATAACGAGTTCATTTCTGTTGGACGTGCAGATGTGCATTTGAAATATT
ACAGTCGTTGCCTTGGAAACGGCTAACAAACTTAACTTACTGGTAGACAT
GAATGAAAACAATAGCTGATTTCAAATCGCCGTAAAAAAAATCTTCAGGA
ATATCTTTGTAAGACCATTGTTCAAAAGTGTCACGTTTGTTAATTCTTAC
CATTTGTGCGCATTTATTTGAATCGGTAGGGTGGAGCACAGAAATGGTTA
CATTCTCCCATAGGCTTTTTGGGAGCCCTTGAACCATAAATAATCGTTTT
TGTTCCAACATAAGGCACGTGCTCAAAACTAAACCCAAGTAATCTTTACA
CTCTTCAAATTCCTTCTTCATAAAGGAGAATTTTTTCGTTCTGTAAAGTT
CTTTGTTCCCCATAAAGGAACTTATATTTTCATACCATTCCTTATACGAG
GGGTACAAATCAACCCGTTGTGTTATGTTTCCTTCAAAAAACATCTCAGC
TCCCCAAACAAGTCGACCTAGCTTAGAAACAGGAGGATTTTGTGCATCAT
TTTGTCCCAGCTTTATTTTAAGCAACTCAATTTTATGTTTTAGCGTTTGA
ATTTCACCCTCCAAAGCACGATTAACTGCAGCTTGTTTTTGGTCTACTTT
TAGTTTAATAATTTCTTGGTCATGTTTGAgattttggatttctttttccA
TCTCTAAACACTTTATCTGGTGtttcagattttctttttccttgtCTTCT
CTCAACTTTGCATTTTCTTGTTTAAGtctttgaatttcttccctCGGATC
CATTCCTCGATCGACTGCGCAGTGTGCTTCGTTCATTGTGATTATGATTA
AAGTTTCTCCACTTTACTTTTTTACGTACAACTTTCACTTCTATCTAAAT
TATCGTCAATCATGAAAAGTTTTCGATATCAAAGGTTCAAACCCCCCTAT
GTTTAAAAAATCTACAACTTTCCTGTACATATAATGAATTGTGTTTTCAA
GTATATTGGCTAAAAATGCCTTCtaataccactatttattacctATTAAA
TACAAAATTAATCTTTCAATaccattattttattttatttgttatcTAAT
TAATGTGCATTTAGCATCGACAAGTATTTTGAGTATTTGTTATTAGAAAA
TGTATGGTTTTCGATCcgaaattttttaacaaaatctagAACTAGAGTCG
TTGTTGTATAAAAGATTATTTACTCGAAATCGATTTTTTCCAGAGCGAAG
CCTCACTCAGAtatgaacaattttataaaggACCACGAGGCTGAAGTTTT
GCAGAAACTTAAGAACATTCTGAACGACGAGGCTTAAGTTTTGCCGAAAC
TTAAGAACATTCTGAACGACGAAttataaagttttaaaataagaaatcga
aataataagaacaagtgaggttaagtcaaaattttcaaaatttaatccaG
TTCATCTGATTTCCACTCATAGATATCTTTCTTTCACCATGTTCTTGAAC
GATGTCGAAGAAGGCGGTGAATTGGTTTTCCCGCTCGCCAACAACCCCTT
CAAAGTGAGTTCAAAATGTTATTTTAATCCACAAGAGGATATAGAAGTCA
TTTGCTATGAAAGTTTGATTCGAGGCAACCAAAAAAAATTGCCGATCCAG
AAcactactctgatacaagagtgtgggtgatatgccagacattgtggtgt
gtggTTTTACTCATCCCGTTCTGTGCCTGAGACGAGCTATATGCTCTCCC
GCGTAGTCCAAGTGTCACCACTATACATCATGGTATCTGTGTCTCGCCTG
CACAGAACCAGCGGTGTCTGGACAGTGCTATGCATTCCTACTTGAGAAAG
GAGGAAGGAGTAGTATCCATTCCCCGATGTGGAGGACTCTTATCATTGTA
TCAACAACTGCGAAAAAGTGTGAGTCCACGCAAAATGGAAGCTTGGATGC
TTGATAGGCTGTAGATCTAGAACGCCATCGCTTAATTAAAGTTGTTTGAT
GGTTGTTTTTTGAATACATTCAACTACCATTGATTTGTTTTCAGGACATC
ATGAAAAATTCTGGTGAATGGCATGGCTATTATCTATACTCCAAAACCAC
AGGCAGTAGAACATTTTTCACCGTCGACATGCATTTCACACCAGGAGAAA
ACGACAATGGAACTTTCAATGCGTCTGGACGTGAAAATGGTGGAGAGTTC
GTGTTCCGTAATGCGGTAATTGAAGGTATTTAAATGATTTTTAGGACTTT
AGAGTTCACTTTgtcaacaatttaaaaaaactagaccatagatttataaa
gcccgaagggctagatgtcctGAGATGTCGTGCTTTTTGTCGTGAGGTta
agtaggaaatcctacctaggtcacgtgatattacaatagaatttcagcgc
ttgaccaagaAGAAGCTCTGGcagtcaagaacaccttcaaattagcctat
catagactgattagcctatcataggctatttagactattttatataggct
atttagccgaaaatcgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTTCTGATAATGAAGTTCTGCTGAATC
GACAAAAAGCCCGATTTTCTTACCCTGCGCATGCGCACGCATGCGCAGTa
ccaaaaagtggaatatttcctaaaccaaaactgacccaaagtcaaaattt
gtcatgagcatttctctgacaatgagaaaccatgtattccttagagaaga
cgcgactatttatatttcgtcataaatcgaggtttttatcgattttcggc
taaatagcctatataaaatagtctaaatagcctatgataggctaatttga
aggtgtcctTGACTGTCTgggggttttcgaaaacaatagcagcaatatta
tttgcgatattcacttttttcttttgcttggaagagcttaaagcacgaca
ccTAGCCCTTCGGGATTATTTTACGGGATTTTGTCGATGTTTTATCTTTT
AGCtagaccactgacctttataaagcATGGACAAAGCTATATCTACCATC
TTTGACTACTCGATGTGGGGTCAATTTatatttcaatgaaatttaCTGCG
TTTAACAAAGGTTTCCACCCACCGAAAAACTCTGATAAAAAATTTGAGTG
ACTGTGTCCAAGCAATATAAAGGTCAGTAAGCTAGACTCCTTTGTAGTGT
AGTCTTGAACAACTTAAActaacaaactttaaacatactgaaatgaaaat
caaaatcaaaaacaacaaactttGTCTCTTTATTGTGTTATATTTTCACC
GGGATTTTCGCTTCCTTGACGTTAGAAAAATGGCGTCTGAAATATATTGG
CAAAAAGTGAATTCGTCTCGATTTCATGCAAAATTCTGATGCTATTTCGT
TTGAAACTTTTGCCTGTGGCATTTTCAAATTATATCACCTtttcttttaa
cattttcttttaacTGTCCCTTCAACATTTTGACCATTTCTATCATAGAC
CGTTTCACGGTCGAAATGAATTATGGGTAATCATGACTGATTAAATCAAC
GACTTCTCTTTAACACAATCAGAATTTTAGAGCAGCGCAACAGAAGGATG
CAATGAAACGCTGTGGTCCTACTTACCCATGATTCCTTCGACCGTGAAAT
GACGTATATAAGTAAGTCCGATTGGGAAATAtagaccacagatatcttat
aaaacactagataaagCTACTCTATCCTGCTTTACCAAGCTAAGGAGGGA
AGCAAAATAATACGCCATCTTTGCTGAGAGTAGGTCACAGTAGAAGCCCA
GGTTTTCACTGTTGAAGTTTTTTTGActctgcaatgacttcaaaatttca
aggatcGCGCAAACGAAATTGTGACGTCAGTTTATTCAAGATAGCGCGTC
ATTTTGCTTCAAATAGGGATTAAGAGGAAACTCTATCGAGTgctttatat
aagatatctgtggaaGAGACAGGATCTCCCACTTCAAGGACATTCTTCTT
TCGCATCTAGGAGAAAcggtgaaatttgaaaaagtttacaaacCATCCGA
AGCTGAAGAGACTGGAAACGAACAAGGGATTCGTTACCATGGAAAGATCA
TTGAACAGACACAAATCATGGGATATTGGTGGGTTCCTGGCAATCAACGA
ATGAATGGCCGTTTCTTCATGTGGAATCGAGAGTTTGAGGTACGTCTTtt
acgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttctc
AGCTCTTCTTGGAGgaatattggaaagatattcccaattcaaaatttcgt
gtcattataagcattttgtttgattttactcgtctgatgatttttttctc
acacaccagatttcataactGTGTCCGTTTGGTATTCTGGCAttattgtt
ttcaaacttttggccagcaaaagtacgaatagaaaaagttagagaacttt
ttagaaataagagtatttatcatttttcaaaatcagagtccttcgagccg
ccatgacagttgtcctttgcggacaaagcctgtacattgattgttttctg
aaacaatagaaagacaatacttcgctctccagtttcattcgatgtttatc
cagagtctctataataaatccatgatgTGACGAagcctaatttttgaaaa
agaaaaattcttggTTCCCACATTTTCTCAAGGCCTTATTTATCGGTAGT
TtagctttctctgaaatttaACCTGTGGAGACGGACTATAAGAATTTCAT
TGCGCATGTCTCAATCATAAATGACACGACCTTCAACCAAGATTCTGGGT
GATTCCCATGGCAACTTTTGTCTTCGTTAAATGTGCTTTGAAAAGAATAT
CTGTCGTCACAGTgtactttttttcttctatttggttgagtcgcaggagg
ctttgaggcccattttcgcaactatagacgctttcaattNATTGAGTCGC
AGGAGGTTTTGATGCCCATTTTCACAACTATAGACAGATAGACGCTTTCA
ATAAGctccccgtcagcaccttgaactaactacccaattcccctcacatg
gcatgggttgacccgggcgaaggttcattcacttgccaagtgaaccgctg
cgagtgggaatcgaacctcagttgcctgtgcagcaaccaaggtcaatgac
cactataccacagcgcctgtACAATTCACACACTGTGAAGCTCATTATGC
TAAATCAATTTCTTAATTACCAGTATGTGCACAATTTactatcattaaaa
aaaaattaaatccgcTTTTTTGTCAGCCATAGTTTCCTCCCCCTTTTCTG
CTAGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Nggggggggggggattttttggaaactttttgccaaagaagggggggggg
agaaaaaaacatatagtctgaatcacagacctctatagatataggTACTT
GCTATAAGAAATCTTTTCGATAGAGGATGAGCATAGGCCTGACCTTCAAA
TAGACCCTGGAGGCAGTTTTTCGGCcctggccaagcaaaatctttagATC
GGGGTTTCTTTGAAAGGGTACcttaccctaatggtagcactattAGTATG
CATCGATACTACTTGTGATGCAGTGCTACTTCGATAGTTTCTGTATGTGG
CTCCcacgcaaatttttttccgtacatggaAAGTATCATCGAtggtcggg
agtatctcatattttttgtttggttttgttgtttggaattgcttaggtca
gggttgctagtaacggctcgaatttcagtcaggttaaaaaaggggcaatt
ttacccatattataataacattaccccgtcttttttgtcattataTAAGT
ATTTCCTAATGttgtgttctgctgtgcgagtgtggctcaacggatagcgc
gctgggtttctgatcagaaactctttcatttggtgggttcgaaccccggt
cgggtctatatttcaaggtttaagataagtttaagatactccggcccgtc
gatgatactcccgaccgtcaagatgagatactcccgaccatgtacggaaa
aaaatttgcggcTCCCACTTTTAAAAAAcaccaatcaaagatggcgcatA
AAGCTCTGTCCATGATTATAAAGACCAGTGTTGTCATCCCGTTTAAAATG
ATACCGTTAATCATATTATTTATGCCCCCTTTTTCAGATTTACTCCGCCC
GCGCGGTCGACCAATCAAATCGAAACGAAGGTTGTTTGAAAGCTCCTTTG
AAAATCAAACCGAAAAAAGGAAAAGCTGTTTTCTGGTACAACCATCATTT
GAACCCCCTGAATGATATGGTTGGACCTTTAAATCATGAGGCGATTTTCG
CACATTGTGAAGTGAACCAAGGGGTCAAATGGACCGCGTCTGGTCGGCTA
AATATCATCGGAGATGGAGAGCTTAAATTACGTACGTGGAGAAGAGGAAC
TAATTTAATGCATGACCGGAAAAAAATGCGGAAAATTTATCAGCGGTTAG
GAACGAACGAACCAAAGCGAGAAATCGAGGAATACGAAAAAGACTTTTAT
GAAGAAATTCACGGTAAAAAAACTGGGAATGATTCTGCAAAGGATTCTGG
GTATAAATATAAACAATCGAGTAATGCATTGCAAGCGTTGAACCTGTTGG
TGAACGATTTATCGAATGAACAATTATCCATAATGGCAGCCAATGTGCAT
CGCATTTTAGGCCTGCAGTGTATGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010080XLOC_010080Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017980-exon-sc0000282-1491911889:123257..123276TCONS_00017980-exon-sc0000282-1491911889:123257..123276Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1510915933:123257..123276TCONS_00017980-exon-sc0000282-1510915933:123257..123276Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1575043694:123257..123276TCONS_00017980-exon-sc0000282-1575043694:123257..123276Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1491911889:125403..125496TCONS_00017980-exon-sc0000282-1491911889:125403..125496Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1510915933:125403..125496TCONS_00017980-exon-sc0000282-1510915933:125403..125496Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1575043694:125403..125496TCONS_00017980-exon-sc0000282-1575043694:125403..125496Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1491911889:125993..126176TCONS_00017980-exon-sc0000282-1491911889:125993..126176Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1510915933:125993..126176TCONS_00017980-exon-sc0000282-1510915933:125993..126176Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1575043694:125993..126176TCONS_00017980-exon-sc0000282-1575043694:125993..126176Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1491911889:126589..126762TCONS_00017980-exon-sc0000282-1491911889:126589..126762Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1510915933:126589..126762TCONS_00017980-exon-sc0000282-1510915933:126589..126762Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1575043694:126589..126762TCONS_00017980-exon-sc0000282-1575043694:126589..126762Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1491911889:129229..129310TCONS_00017980-exon-sc0000282-1491911889:129229..129310Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1510915933:129229..129310TCONS_00017980-exon-sc0000282-1510915933:129229..129310Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1575043694:129229..129310TCONS_00017980-exon-sc0000282-1575043694:129229..129310Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1491911889:129801..129981TCONS_00017980-exon-sc0000282-1491911889:129801..129981Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1510915933:129801..129981TCONS_00017980-exon-sc0000282-1510915933:129801..129981Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1575043694:129801..129981TCONS_00017980-exon-sc0000282-1575043694:129801..129981Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1491911889:132517..132695TCONS_00017980-exon-sc0000282-1491911889:132517..132695Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1510915933:132517..132695TCONS_00017980-exon-sc0000282-1510915933:132517..132695Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1575043694:132517..132695TCONS_00017980-exon-sc0000282-1575043694:132517..132695Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1491911889:134794..135334TCONS_00017980-exon-sc0000282-1491911889:134794..135334Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1510915933:134794..135334TCONS_00017980-exon-sc0000282-1510915933:134794..135334Clytia hemisphaericaexon
TCONS_00017980-exon-sc0000282-1575043694:134794..135334TCONS_00017980-exon-sc0000282-1575043694:134794..135334Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000282supercontigsc0000282:123257..135334 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0726311	0.0616002	0.0460132	0.039925	0.394624	0.376353	0.780784	1.35931	0.223345	0.153786	0.655312	0.41718	0.398106	0.345501	0.300971	0.624782	0.622087	0.532259	0.047528	0.0479718	0.364767	0.2377	0.169877	0.168515	0.31011	0.358521	0.0557429	0.0305707	0.107819	0.0887032
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017980 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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