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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018015 ID=TCONS_00018015|Name=TCONS_00018015|organism=Clytia hemisphaerica|type=transcript|length=432bp
AGATGGTTGATTATTCGGAAATGACAACTCTAATATTTATCATTGTGCCA
ACGTCAGCAGCTCTTTTGGTCATTACCTGCGGTTTTTGTTATTGGAAAAG
TAGACAATTAGATCGTCTTGAAGCGTATGCGCTAAAAAGGTATAACGGTG
AAAATGTAAATATGGTGCATATCTGAAATTTGGAGACTGACTGGTGGCAA
CCCGATtctgagaaagcacctcgtgggcgagcggtcacggcacacacggg
gttctcaccctctatgacgtgccgttccaagcaattttaccgcgaccact
tcgctgtgacagtacttctcgagactacaattcgctgaccGTAATATCAA
CGCTTTTCAAGCCATTGGATGTATACGAGCGTGTTTTTGAAAGCCGAGGG
CGGACAAGCCactgtgattggttgaaaaactc Run BLAST on NCBI transcript from alignment at sc0000282:283066..284528- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018015 ID=TCONS_00018015|Name=TCONS_00018015|organism=Clytia hemisphaerica|type=transcript|length=1463bp|location=Sequence derived from alignment at sc0000282:283066..284528- (Clytia hemisphaerica)
AGATGGTTGATTATTCGGAAATGACAACTCTAATATTTATCATTGTGCCA
ACGTCAGCAGCTCTTTTGGTCATTACCTGCGGTTTTTGTTATTGGAAAAG
TAGACAATTAGATCGTCTTGAAGCGTATGCGCTAAAAAGGTAAATATTTT
GATCGTATAAATTTTCGTGAGGTTTTATTTCGCGAATGTTTGCCTTTTTC
ACGAATAGACGATATTGGCTTAACGTGAAAACTCAGATTTGACCTCCGAG
AATTCCCCACAATGCTTTGTGCGGAAAAAAATTCACGGTGAACTTTTTTC
CGCGCAAAGCATTGTGGGCAATTCTCGGAGGTCAAATCTGAGTTTTTACG
TTAAGCCGATATCGTCTATTTAATATAATCTTTAAGATCAGATTTTCGGC
TTTCAATACCCTGTAAATTTGCTTTTTGTGACAAGTGTATGTTTTTTTAT
AAGCATAACGTTTATAAGCCTACTGAGACCTGAATTTGTCTAAAAAGTAA
GCATATTACAAGAATATTACTGAACTTGCTTTTGAGGTGTGTTATTTTCC
TATCCTCGTGTATAGCAAGGACAGATTTTGGAAAAATTGGAGACTGAATT
TTTTCGAAAAATAAGCCTACGATAAACAATTTGAGCCTGAGTCTATAAAA
TCTCTAAGCATAACTGAGCTTGTTTCCTAAAAAAACATATGCTTATAAAA
AGAACATGTGTGGGTGATTTCAGGACCATAGTTATCCAGCTGTTTCGCAA
AAAACGCAAGAAAACGCTGCGCGGACCTGCCTGAATGATGGAAAGTTCAA
CCCTAAGGGGGGGGGGCTTAGCTTTCTAAAAATGTATATAACAAGTGCTT
TGACCAAAACAATATCGCGCGATTTTACAAAATGCCCTCTACTATTAGTC
CACTTCCGTTTATTAAACTGCAAAAAAAATTTGGAGCTCCTTTTTGTTCG
GAGCCCCGACTTTTGGGGACTTTAGAGTAAGTCTTTTTAGGGGTGACCAA
CCAAGCGCACTCGTCCGGCTCTCCGGAACGACTCAGCTTTTTCTCGCGTA
AGTTAGATGAATTTGTATATTAAGTTTTTAAGAAAAGGGTAGATTTATAA
AGGTCTTGAAGGAAACAAAAAAACTCTCTGCTCGATATAATTTAACTTCT
TTTTCGTCCTTTGTTTTCAGGTATAACGGTGAAAATGTAAATATGGTGCA
TATCTGAAATTTGGAGACTGACTGGTGGCAACCCGATTCTGAGAAAGCAC
CTCGTGGGCGAGCGGTCACGGCACACACGGGGTTCTCACCCTCTATGACG
TGCCGTTCCAAGCAATTTTACCGCGACCACTTCGCTGTGACAGTACTTCT
CGAGACTACAATTCGCTGACCGTAATATCAACGCTTTTCAAGCCATTGGA
TGTATACGAGCGTGTTTTTGAAAGCCGAGGGCGGACAAGCCACTGTGATT
GGTTGAAAAACTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018015-exon-sc0000282-1575043694:284390..284528 | TCONS_00018015-exon-sc0000282-1575043694:284390..284528 | Clytia hemisphaerica | exon |
| TCONS_00018015-exon-sc0000282-1575043694:283066..283358 | TCONS_00018015-exon-sc0000282-1575043694:283066..283358 | Clytia hemisphaerica | exon |
| TCONS_00018015-exon-sc0000282-1510915933:284390..284528 | TCONS_00018015-exon-sc0000282-1510915933:284390..284528 | Clytia hemisphaerica | exon |
| TCONS_00018015-exon-sc0000282-1510915933:283066..283358 | TCONS_00018015-exon-sc0000282-1510915933:283066..283358 | Clytia hemisphaerica | exon |
| TCONS_00018015-exon-sc0000282-1491911889:284390..284528 | TCONS_00018015-exon-sc0000282-1491911889:284390..284528 | Clytia hemisphaerica | exon |
| TCONS_00018015-exon-sc0000282-1491911889:283066..283358 | TCONS_00018015-exon-sc0000282-1491911889:283066..283358 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000282 | supercontig | sc0000282:283066..284528 - |
Blast
The following BLAST results are available for this feature:
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