TCONS_00018073 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018073
Unique NameTCONS_00018073
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length177

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018073 ID=TCONS_00018073|Name=TCONS_00018073|organism=Clytia hemisphaerica|type=transcript|length=177bp
ATTTGAAACTTGGGGTATGTTAAattctacggaaaaaaaattacataggA
CAAGAAATCCCCCTAAAAGATGTTCAGAACCTGTTTTAAaaccttttatt
ttatttgaaagttgcAAAAAGGCCTTTCTATAGTTTATCTTTTAAGGTTT
GGGAATTATAAATTTCTGAAAAGCAGC
Run BLAST on NCBI

transcript from alignment at sc0000284:58464..58640

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018073 ID=TCONS_00018073|Name=TCONS_00018073|organism=Clytia hemisphaerica|type=transcript|length=177bp|location=Sequence derived from alignment at sc0000284:58464..58640 (Clytia hemisphaerica)
GCTGCTTTTCAGAAATTTATAATTCCCAAACCTTAAAAGATAAACTATAG
AAAGGCCTTTTTgcaactttcaaataaaataaaaggttTTAAAACAGGTT
CTGAACATCTTTTAGGGGGATTTCTTGTcctatgtaattttttttccgta
gaatTTAACATACCCCAAGTTTCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010131XLOC_010131Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018073-exon-sc0000284-1491911889:58464..58640TCONS_00018073-exon-sc0000284-1491911889:58464..58640Clytia hemisphaericaexon
TCONS_00018073-exon-sc0000284-1510915933:58464..58640TCONS_00018073-exon-sc0000284-1510915933:58464..58640Clytia hemisphaericaexon
TCONS_00018073-exon-sc0000284-1575043694:58464..58640TCONS_00018073-exon-sc0000284-1575043694:58464..58640Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000284supercontigsc0000284:58464..58640 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018073 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top