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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018103 ID=TCONS_00018103|Name=TCONS_00018103|organism=Clytia hemisphaerica|type=transcript|length=463bp
tttttaagtaagagtggtatcgtttgcttactcatcaatcaGAAAATCGG
AACtgttttatttctcattttatCTAGATTCGTATTTTCTATGTTTGATA
CTTGGACTTTTTCTAGGGCCTATGGTAATGACGTTTCAATGAGTGCTCGT
CTAAAAGAAAGAACCATCAAGTCGATGGAGTCAAAGGCCAATGCTATTCA
AAGAACTGCTCAACAAAATGTTATGATTGCTGCTGGTACAAAGAGAGCTC
ATTGTCATGTTGGTCCGACAAACAGCTATCAAATTGATGATTTGGACGGC
TGTTTGGAAAAAGTACGAGAGCTGAAAAGCAAAAACGAATTGGTTGTTTT
CCAAGAATTAGCTGAGAAACATAACTTGGTGAATAAGAaagGAATACGCC
CGGGCAATGCtggtcaagttttgaaaaagatgGTCGAGGAGAAAGGAGAA
GACTTAGAAGAAC Run BLAST on NCBI protein sequence of TCONS_00018103-protein >TCONS_00018103-protein ID=TCONS_00018103-protein|Name=TCONS_00018103-protein|organism=Clytia hemisphaerica|type=polypeptide|length=154bp
FLSKSGIVCLLINQKIGTVLFLILSRFVFSMFDTWTFSRAYGNDVSMSAR
LKERTIKSMESKANAIQRTAQQNVMIAAGTKRAHCHVGPTNSYQIDDLDG
CLEKVRELKSKNELVVFQELAEKHNLVNKKGIRPGNAGQVLKKMVEEKGE
DLEE Run BLAST on NCBI transcript from alignment at sc0000287:345594..346415- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018103 ID=TCONS_00018103|Name=TCONS_00018103|organism=Clytia hemisphaerica|type=transcript|length=822bp|location=Sequence derived from alignment at sc0000287:345594..346415- (Clytia hemisphaerica)
TTTTTAAGTAAGAGTGGTATCGTTTGCTTACTCATCAATCAGAAAATCGG
AACTGTTTTATTTCTCATTTTATCTAGATTCGTATTTTCTATGTTTGATA
CTTGGACTTTTTCTAGGGCCTATGGTAATGACGTTTCAATGAGTGCTCGT
CTAAAAGAAAGAACCATCAAGTCGATGGAGTCAAAGGCCAATGCTATTCA
AAGAACTGCTCAACAAAATGTTATGATTGCTGCTGGTACAAAGAGAGCTC
ATTGTCATGTTGGTCCGACAAACAGCTATCAAATTGATGATTTGGACGGC
TGTTTGGAAAAAGTGTGTTGAATATTAACAAGCTTAAATGATCGTGTAAA
CGCTCGAACAAGCTTTAAAAATCAGTGTAGATTTTGACGACCTTTTGTGT
CATTTCGGTGTCTTTCACTCGCTGTTTGATATTTCCTGTTGTCAATAAAT
CTTATCTATTTTTTACAGGTACGAGAGCTGAAAAGCAAAAACGAATTGGT
TGTTTTCCAAGAATTAGCTGAGAAACATAACTTGGTGAATAAGAAAGGTT
TTTAAGCAAAAGAAATGGTCTTTCCCTCCAATCCAAAATCTATACAGTGT
TTCTATTTGATATTTGATGACAATTAAGAAAGTTCATATTCACTCTGTGA
ACTGCTGTGAAAACAGGAACAATACATGAGTCATCTTCAATTTTCTTGAA
CCTTGATTACATTGGACTATTTTCAAACACCTCGGATTTTATTTTTGCAG
GAATACGCCCGGGCAATGCTGGTCAAGTTTTGAAAAAGATGGTCGAGGAG
AAAGGAGAAGACTTAGAAGAAC Coding sequence (CDS) from alignment at sc0000287:345594..346415- >TCONS_00018103 ID=TCONS_00018103|Name=TCONS_00018103|organism=Clytia hemisphaerica|type=CDS|length=1386bp|location=Sequence derived from alignment at sc0000287:345594..346415- (Clytia hemisphaerica)
GAATACGCCCGGGCAATGCTGGTCAAGTTTTGAAAAAGATGGTCGAGGAG
AAAGGAGAAGACTTAGAAGAAGTACGAGAGCTGAAAAGCAAAAACGAATT
GGTTGTTTTCCAAGAATTAGCTGAGAAACATAACTTGGTGAATAAGAAAG
TTTTTAAGTAAGAGTGGTATCGTTTGCTTACTCATCAATCAGAAAATCGG
AACTGTTTTATTTCTCATTTTATCTAGATTCGTATTTTCTATGTTTGATA
CTTGGACTTTTTCTAGGGCCTATGGTAATGACGTTTCAATGAGTGCTCGT
CTAAAAGAAAGAACCATCAAGTCGATGGAGTCAAAGGCCAATGCTATTCA
AAGAACTGCTCAACAAAATGTTATGATTGCTGCTGGTACAAAGAGAGCTC
ATTGTCATGTTGGTCCGACAAACAGCTATCAAATTGATGATTTGGACGGC
TGTTTGGAAAAAGAATACGCCCGGGCAATGCTGGTCAAGTTTTGAAAAAG
ATGGTCGAGGAGAAAGGAGAAGACTTAGAAGAAGTACGAGAGCTGAAAAG
CAAAAACGAATTGGTTGTTTTCCAAGAATTAGCTGAGAAACATAACTTGG
TGAATAAGAAAGTTTTTAAGTAAGAGTGGTATCGTTTGCTTACTCATCAA
TCAGAAAATCGGAACTGTTTTATTTCTCATTTTATCTAGATTCGTATTTT
CTATGTTTGATACTTGGACTTTTTCTAGGGCCTATGGTAATGACGTTTCA
ATGAGTGCTCGTCTAAAAGAAAGAACCATCAAGTCGATGGAGTCAAAGGC
CAATGCTATTCAAAGAACTGCTCAACAAAATGTTATGATTGCTGCTGGTA
CAAAGAGAGCTCATTGTCATGTTGGTCCGACAAACAGCTATCAAATTGAT
GATTTGGACGGCTGTTTGGAAAAAGAATACGCCCGGGCAATGCTGGTCAA
GTTTTGAAAAAGATGGTCGAGGAGAAAGGAGAAGACTTAGAAGAAGTACG
AGAGCTGAAAAGCAAAAACGAATTGGTTGTTTTCCAAGAATTAGCTGAGA
AACATAACTTGGTGAATAAGAAAGTTTTTAAGTAAGAGTGGTATCGTTTG
CTTACTCATCAATCAGAAAATCGGAACTGTTTTATTTCTCATTTTATCTA
GATTCGTATTTTCTATGTTTGATACTTGGACTTTTTCTAGGGCCTATGGT
AATGACGTTTCAATGAGTGCTCGTCTAAAAGAAAGAACCATCAAGTCGAT
GGAGTCAAAGGCCAATGCTATTCAAAGAACTGCTCAACAAAATGTTATGA
TTGCTGCTGGTACAAAGAGAGCTCATTGTCATGTTGGTCCGACAAACAGC
TATCAAATTGATGATTTGGACGGCTGTTTGGAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018103-exon-sc0000287-1575043694:346104..346415 | TCONS_00018103-exon-sc0000287-1575043694:346104..346415 | Clytia hemisphaerica | exon |
| TCONS_00018103-exon-sc0000287-1575043694:345869..345947 | TCONS_00018103-exon-sc0000287-1575043694:345869..345947 | Clytia hemisphaerica | exon |
| TCONS_00018103-exon-sc0000287-1575043694:345594..345665 | TCONS_00018103-exon-sc0000287-1575043694:345594..345665 | Clytia hemisphaerica | exon |
| TCONS_00018103-exon-sc0000287-1510915933:346104..346415 | TCONS_00018103-exon-sc0000287-1510915933:346104..346415 | Clytia hemisphaerica | exon |
| TCONS_00018103-exon-sc0000287-1510915933:345869..345947 | TCONS_00018103-exon-sc0000287-1510915933:345869..345947 | Clytia hemisphaerica | exon |
| TCONS_00018103-exon-sc0000287-1510915933:345594..345665 | TCONS_00018103-exon-sc0000287-1510915933:345594..345665 | Clytia hemisphaerica | exon |
| TCONS_00018103-exon-sc0000287-1491911889:346104..346415 | TCONS_00018103-exon-sc0000287-1491911889:346104..346415 | Clytia hemisphaerica | exon |
| TCONS_00018103-exon-sc0000287-1491911889:345869..345947 | TCONS_00018103-exon-sc0000287-1491911889:345869..345947 | Clytia hemisphaerica | exon |
| TCONS_00018103-exon-sc0000287-1491911889:345594..345665 | TCONS_00018103-exon-sc0000287-1491911889:345594..345665 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000287 | supercontig | sc0000287:345594..346415 - |
Blast
The following BLAST results are available for this feature:
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