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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018192 ID=TCONS_00018192|Name=TCONS_00018192|organism=Clytia hemisphaerica|type=transcript|length=3606bp
ACTTTATTCAAATTTGGACCTAACAACCAATTTCAAACAAAATTCGTAAT
AATTCATTTTATAATAACTTGGCTAAAATATATAAAGattcacaaaattt
tacaaaaaataatttgcagttGCCGGAGTATAAGATTTAGAAATTACTGA
AAAGTGCAAATCTCTACTTTATTATGGTGCTTATTCTGGCAACATCTAAA
GActtgaaagataaaaataagaTGCCTTGTCAAAATAACTCCAggccaaa
ttttttttatcttcctaACTTTTCCTACAACGCTACAACCcttacttttt
ttaaagctCATCTTTgcacaaaaaagaaattaatacacattttcgaccgt
agccgccaaatgccgtgcgggcatttttgtccgttttagcctcctaaaac
cgtcccagtcttttttggcacctatagacaatagaaaaaggcgTAAAAAA
GGATTgcatcgagtttagggggtaattagataataaagtggcacgcccCT
GACCGCaagactacggtcgaaaagttgTATTTGCTTCATCATTCaccaaa
attatttcttgtcaaaattaaaaaccGTTACTGGTTGGCTAAAGTTTTCA
CGTACTCTAAGAAAAAATATTGGTGATGAATCAATATAATAAACAATTGA
ATTAATGCTACAATAGATAATAACATCGGAGAAAAAACACTAATCACAGA
AAAATACAACCACATTAGCGCTACTTGAATGGATTCATTTGTGGTAAATA
GTTAAatagggctctgaccatagtcaaaagatCGGTTACGCAGATTTAGA
Gatgaaacttttgttttgagttccttgacacttttaacaaaaaaaattgt
ctttataaGTTGTTACTGAATTTGTTCTATCAAGAGTAATTagcaattta
attacaaaaatgacgttatgaaccttaaaaggacgttaataaaatgttat
gTTACCCTCTTTTACGAAAAGTGCTAaattttaatgggtaattaaccttt
ttgtttcgaattttttattaaTTGTCTGCAACAGATTGAACTATccaaaa
attttcggaaaaattttctacgACTCTTTTTGCGCAAAAAgctgggatga
aaaattggtcaaaaacaactttttacaagattttgagacaaaaaaaggtt
ttacaaaaatttgttagttcgccgaaaataagctcctcaaagttgaaata
ctttcattttcttcttcgttaaattttttcaatgcaatttttgaattttc
agatttaggAATATTTAGCTtgacagaaaatgtataacatgccatagttt
aattggttacatcagtcataaaacacattttaaacacgacaattatgaaa
aattcactatggtcagagcccttaacttgAAAAAGAAGTAATTTAATCTT
ATAACAGATCATTCACTCCGCACAAACCACGCTCTGTTCTAAAGGATATG
GCGAATGTGATGATTTGACCTGCTTGAACatgaaaacgaaagcgacttGG
TTCCATTGTTTATGTATTGTTTGAATATATGATTGACAAGTGATTTCGGT
GCGATTATTTTGCATTAGGCAATCAGTGGacttaaaagctcatttaatat
tcatcgcAAGTGTGGATGAGAAAGATCAAAGCGGACTGGTTCTCTTACCG
GACTTACCGTTAGATTGATTACGTGCTATGCGcggagtatcagaatctgc
tcggagattatAAAAACTATCTGTATTTTATGGTGGAAAAGCTtataaat
ttaaaagaaaatgcgcattgtttaaattgaaaattacaGCGGGTTAGTTT
AtatcttattttccttcaataACTTTTTTGAAGCTTACAAATCTTTCTAT
CATCTTTTGATAGTCTTCTACCGATTGCTGtagattttcacttttaagcT
TATTTTTAGCTTCTTCCagctctctttttttttcttgcatTGGCAAACTC
AGGAAGTAAGCAGCAGCGTACCCCACACCTTCAACTCCTTTGTTGGCAAG
CCAGTTTATACCCAGTGTGAACACATTTGCCCACTTATTATTGCCTTTTT
CTTCTGCAATTTGTTGAACTCCAACAAAACTATCATATCGCTCTTTGCAT
ATTGCATATTCCCCTTCTAATCTTTTGATAACCTTTTGTTGatcttcctt
taaattttctgcATAATCTTTATCCTTGCTTGCTTTCATCGCCAACTTTT
CCAATCCCTCGAAAAGGCGAAGGTGTTCAGACGTCACAGGCTCAATACCA
GACTTTCTAAGAGTTTCCTTCAAATTCTTTAGTACATCTGTCATATTTTT
GTCAGGACTGTATTTCTTACTCAAACCGTATAACACAACAGTTGAATTGA
ATTTGATACCAGTCGTATCTCTGATCTGCTTCTCATAGGCTTCATGGCCT
TTTTTGCGCTCTTTGTCATGTTCTGCCTTCCCGTCCAAATAagctttttt
gtcatttttatcattCTCATCCAGTTCGTCTGGGTTTGGCCATTGCGCTT
TCATATCATTCAAGATTAGAATCTTAAGGGCTGAGCTTTTACTGATTTCA
TCAAACAACAGAGAGCAATCTTCGATTCGGTCTTTGGTATGGCTATCCAT
TCTCAtatcaacagaaaaaataatgaaaattgcGGTACATTCCTTTTTAG
CTTCTTTTATGATCATATCATAGTACTCTTTTGTATTTTCCGGTTTTGGG
TCTGGAATTCCCGGGACATCAGTGTAGAACATATGCCCTGAGTTGATGGT
TTTTGGTTTCTGAGTAACTCCTTGGGTAGATGAACTGGTTTTTAGATAAT
TCGAATCTTTGctcttcaaattcaaaagaCGATTTCCTATTGTTGATTTC
CCGACACCTGAAGGCCCCACAGCCATAATACGAATTTCTTTTGGATTTGA
TGCAGCCATCGATGATGTAGCTAGATAGATGAATTAACTAGGTTAGATAA
TTTACTACTTGTAGCCATCATTCCTTCCTATTTATCCAGAAATACTAATA
GAATCATGTAACACCTTTTATGTTAGACAAAAGGTCTAGAGTGGAATCAG
CAACCTCGTTTTTTCCCAAACAAGAAGCAAAAGAATTAACTTACTTTTTG
GTATATTAACTAATATTTAATGCTTCCTGATTTCAGGGATATGtaatagc
ggagctggatgaaggatgAGAATTCCTTTGCGgatttcttttttgtcttt
tctattgtaaactgttcataatagaaatccatctcttgagtgttttgttt
ttataagaaaaataataaagcagacaaagtattcatgcagtacgtctGCA
ccttttgctatgatgttcccgcttttcatcaaaataatatttgcagaAGA
TCACCCAAAAGCTtacttgtaaatgaaatctaagcatgtgttatgaattt
gagaagctttcatgatttctctttaaaaatttcggatgtaaatattttga
caaagattgtttcaattgaaatgaaattttttccataatcagataTACCG
ACtcgctatctgaaaatatcagttagaaagtgaggtacctcgcggtgtag
cgcggtattttaaatgaaaaagtgctatttataatctttcagaaaaaatt
tcttat Run BLAST on NCBI transcript from alignment at sc0000291:100715..104401+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018192 ID=TCONS_00018192|Name=TCONS_00018192|organism=Clytia hemisphaerica|type=transcript|length=3687bp|location=Sequence derived from alignment at sc0000291:100715..104401+ (Clytia hemisphaerica)
ACTTTATTCAAATTTGGACCTAACAACCAATTTCAAACAAAATTCGTAAT
AATTCATTTTATAATAACTTGGCTAAAATATATAAAGattcacaaaattt
tacaaaaaataatttgcagttGCCGGAGTATAAGATTTAGAAATTACTGA
AAAGTGCAAATCTCTACTTTATTATGGTGCTTATTCTGGCAACATCTAAA
GActtgaaagataaaaataagaTGCCTTGTCAAAATAACTCCAggccaaa
ttttttttatcttcctaACTTTTCCTACAACGCTACAACCcttacttttt
ttaaagctCATCTTTgcacaaaaaagaaattaatacacattttcgaccgt
agccgccaaatgccgtgcgggcatttttgtccgttttagcctcctaaaac
cgtcccagtcttttttggcacctatagacaatagaaaaaggcgTAAAAAA
GGATTgcatcgagtttagggggtaattagataataaagtggcacgcccCT
GACCGCaagactacggtcgaaaagttgTATTTGCTTCATCATTCaccaaa
attatttcttgtcaaaattaaaaaccGTTACTGGTTGGCTAAAGTTTTCA
CGTACTCTAAGAAAAAATATTGGTGATGAATCAATATAATAAACAATTGA
ATTAATGCTACAATAGATAATAACATCGGAGAAAAAACACTAATCACAGA
AAAATACAACCACATTAGCGCTACTTGAATGGATTCATTTGTGGTAAATA
GTTAAatagggctctgaccatagtcaaaagatCGGTTACGCAGATTTAGA
Gatgaaacttttgttttgagttccttgacacttttaacaaaaaaaattgt
ctttataaGTTGTTACTGAATTTGTTCTATCAAGAGTAATTagcaattta
attacaaaaatgacgttatgaaccttaaaaggacgttaataaaatgttat
gTTACCCTCTTTTACGAAAAGTGCTAaattttaatgggtaattaaccttt
ttgtttcgaattttttattaaTTGTCTGCAACAGATTGAACTATccaaaa
attttcggaaaaattttctacgACTCTTTTTGCGCAAAAAgctgggatga
aaaattggtcaaaaacaactttttacaagattttgagacaaaaaaaggtt
ttacaaaaatttgttagttcgccgaaaataagctcctcaaagttgaaata
ctttcattttcttcttcgttaaattttttcaatgcaatttttgaattttc
agatttaggAATATTTAGCTtgacagaaaatgtataacatgccatagttt
aattggttacatcagtcataaaacacattttaaacacgacaattatgaaa
aattcactatggtcagagcccttaacttgAAAAAGAAGTAATTTAATCTT
ATAACAGATCATTCACTCCGCACAAACCACGCTCTGTTCTAAAGGATATG
GCGAATGTGATGATTTGACCTGCTTGAACatgaaaacgaaagcgacttGG
TTCCATTGTTTATGTATTGTTTGAATATATGATTGACAAGTGATTTCGGT
GCGATTATTTTGCATTAGGCAATCAGTGGacttaaaagctcatttaatat
tcatcgcAAGTGTGGATGAGAAAGATCAAAGCGGACTGGTTCTCTTACCG
GACTTACCGTTAGATTGATTACGTGCTATGCGcggagtatcagaatctgc
tcggagattatAAAAACTATCTGTATTTTATGGTGGAAAAGCTtataaat
ttaaaagaaaatgcgcattgtttaaattgaaaattacaGCGGGTTAGTTT
AtatcttattttccttcaataACTTTTTTGAAGCTTACAAATCTTTCTAT
CATCTTTTGATAGTCTTCTACCGATTGCTGtagattttcacttttaagcT
TATTTTTAGCTTCTTCCagctctctttttttttcttgcatTGGCAAACTC
AGGAAGTAAGCAGCAGCGTACCCCACACCTTCAACTCCTTTGTTGGCAAG
CCAGTTTATACCCAGTGTGAACACATTTGCCCACTTATTATTGCCTTTTT
CTTCTGCAATTTGTTGAACTCCAACAAAACTATCATATCGCTCTTTGCAT
ATTGCATATTCCCCTTCTAATCTTTTGATAACCTTTTGTTGatcttcctt
taaattttctgcATAATCTTTATCCTTGCTTGCTTTCATCGCCAACTTTT
CCAATCCCTCGAAAAGGCGAAGGTGTTCAGACGTCACAGGCTCAATACCA
GACTTTCTAAGAGTTTCCTTCAAATTCTTTAGTACATCTGTCATATTTTT
GTCAGGACTGTATTTCTTACTCAAACCGTATAACACAACAGTTGAATTGA
ATTTGATACCAGTCGTATCTCTGATCTGCTTCTCATAGGCTTCATGGCCT
TTTTTGCGCTCTTTGTCATGTTCTGCCTTCCCGTCCAAATAagctttttt
gtcatttttatcattCTCATCCAGTTCGTCTGGGTTTGGCCATTGCGCTT
TCATATCATTCAAGATTAGAATCTTAAGGGCTGAGCTTTTACTGATTTCA
TCAAACAACAGAGAGCAATCTTCGATTCGGTCTTTGGTATGGCTATCCAT
TCTCAtatcaacagaaaaaataatgaaaattgcGGTACATTCCTTTNAAT
CTTCGATTCGGTCTTTGGTATTACTATCCATTCTCAtatcaacagaaaaa
ataatgaaaattgcGGTACATTCCTTTTTAGCTTCTTTTATGATCATATC
ATAGTACTCTTTTGTATTTTCCGGTTTTGGGTCTGGAATTCCCGGGACAT
CAGTGTAGAACATATGCCCTGAGTTGATGGTTTTTGGTTTCTGAGTAACT
CCTTGGGTAGATGAACTGGTTTTTAGATAATTCGAATCTTTGctcttcaa
attcaaaagaCGATTTCCTATTGTTGATTTCCCGACACCTGAAGGCCCCA
CAGCCATAATACGAATTTCTTTTGGATTTGATGCAGCCATCGATGATGTA
GCTAGATAGATGAATTAACTAGGTTAGATAATTTACTACTTGTAGCCATC
ATTCCTTCCTATTTATCCAGAAATACTAATAGAATCATGTAACACCTTTT
ATGTTAGACAAAAGGTCTAGAGTGGAATCAGCAACCTCGTTTTTTCCCAA
ACAAGAAGCAAAAGAATTAACTTACTTTTTGGTATATTAACTAATATTTA
ATGCTTCCTGATTTCAGGGATATGtaatagcggagctggatgaaggatgA
GAATTCCTTTGCGgatttcttttttgtcttttctattgtaaactgttcat
aatagaaatccatctcttgagtgttttgtttttataagaaaaataataaa
gcagacaaagtattcatgcagtacgtctGCAccttttgctatgatgttcc
cgcttttcatcaaaataatatttgcagaAGATCACCCAAAAGCTtacttg
taaatgaaatctaagcatgtgttatgaatttgagaagctttcatgatttc
tctttaaaaatttcggatgtaaatattttgacaaagattgtttcaattga
aatgaaattttttccataatcagataTACCGACtcgctatctgaaaatat
cagttagaaagtgaggtacctcgcggtgtagcgcggtattttaaatgaaa
aagtgctatttataatctttcagaaaaaatttcttat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018192-exon-sc0000291-1491911889:100715..103352 | TCONS_00018192-exon-sc0000291-1491911889:100715..103352 | Clytia hemisphaerica | exon |
| TCONS_00018192-exon-sc0000291-1510915933:100715..103352 | TCONS_00018192-exon-sc0000291-1510915933:100715..103352 | Clytia hemisphaerica | exon |
| TCONS_00018192-exon-sc0000291-1575043694:100715..103352 | TCONS_00018192-exon-sc0000291-1575043694:100715..103352 | Clytia hemisphaerica | exon |
| TCONS_00018192-exon-sc0000291-1491911889:103434..104401 | TCONS_00018192-exon-sc0000291-1491911889:103434..104401 | Clytia hemisphaerica | exon |
| TCONS_00018192-exon-sc0000291-1510915933:103434..104401 | TCONS_00018192-exon-sc0000291-1510915933:103434..104401 | Clytia hemisphaerica | exon |
| TCONS_00018192-exon-sc0000291-1575043694:103434..104401 | TCONS_00018192-exon-sc0000291-1575043694:103434..104401 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000291 | supercontig | sc0000291:100715..104401 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005525 |
GTP binding |
Blast
The following BLAST results are available for this feature:
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