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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018193 ID=TCONS_00018193|Name=TCONS_00018193|organism=Clytia hemisphaerica|type=transcript|length=821bp
TTATTTGGTATtccattgattttaaagcccCGAAAGGCTAGAGAGGACCT
TcaacctttttcaagcaaaaaaaataaaaaagccttaagacTTACGCCGC
TTTAAGAATaacagattgaatctagtgctttctttgttttcatgcaGCAT
GATTTCCGAAATCTGttaatagattttactttcaatccattTGTGTAAAA
TGCAGATTACGATTTTTTGATGGGAAACAAGTGGTTTTCTTTTCCATCCA
ACTCTAGCCCATTCGGAGCTTTAAAATCGATGAGAATAACGTTACTTTTC
GCTAAGAATGCCTAATTTTTTGCTATGGTTATAatcaagaaaaatatcaa
acgaATCAGAAAAATGACTTCTTACCATTTGGTGCAAACGGTGACTGAGA
TTGTATTTCCAAATTATCTTCTTCGTTTGTCTGCAAAGGAGCTTGTGAGC
GAGCTCCTTGCTTGTTATGAGATTGATCGAAAGATTGATACCCTTTATTT
CGTTGTTCTTTAGGTGATGATAGATTGATAGAAAAATTACAATTGCATAC
TTTCTTGGCTCCTGCTCCTGTAAGAAGCGCAAAAACAACTGTTCCGATAA
GGGCTAATACCACATATGCAATGATTTTCCATGGAATTTTATCCCAGATG
GAATTATCAGTAGTGTTCTTGTTTTCACTTGATATTGTAGCTGTTACCAT
AAAGCTTGTTGGAGATGCTACTGTGAAAGGTGGTTTTGTTACTGGAGATT
TAATTAGTGACTTTGTTGTTTCACTCTTTGTGTGAATCGGAACATCAGTA
TGTGTTTGTGCTGTAAGCCCT Run BLAST on NCBI transcript from alignment at sc0000291:164065..164956+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018193 ID=TCONS_00018193|Name=TCONS_00018193|organism=Clytia hemisphaerica|type=transcript|length=892bp|location=Sequence derived from alignment at sc0000291:164065..164956+ (Clytia hemisphaerica)
TTATTTGGTATtccattgattttaaagcccCGAAAGGCTAGAGAGGACCT
TcaacctttttcaagcaaaaaaaataaaaaagccttaagacTTACGCCGC
TTTAAGAATaacagattgaatctagtgctttctttgttttcatgcaGCAT
GATTTCCGAAATCTGttaatagattttactttcaatccattTGTGTAAAA
TGCAGATTACGATTTTTTGATGGGAAACAAGTGGTTTTCTTTTCCATCCA
ACTCTAGCCCATTCGGAGCTTTAAAATCGATGAGAATAACGTTACTTTTC
GCTAAGAATGCCTAATTTTTTGCTATGGTTATAatcaagaaaaatatcaa
acgaATCAGAAAAATGACTTCTTACCATTTGGTGCAAACGGTGACTGAGA
TTGTATTTCCAAATTATCTTCTTCGTTTGTCTGCAAAGGAGCTTGTGAGC
GAGCTCCTTGCTTGTTATGAGATTGATCGAAAGATTGATACCCTTTATTT
CGTTGTTCTTTAGGTGATGATAGATTGATAGAAAAATTACAATTGCATAC
TTTCTTGGCTCCTGCTCCTGTAAGAAGCGCAAAAACAACTGTTCCGATAA
GGGCTAATACCACATATGCAATGATTTTCCATGGAATTTTATCCCAGATG
GAATTATCAGTAGTGTTCTTGTTTTCACTTGATATTGTAGCTGTTACCAT
AAAGCTTGTTGGAGATGCTACTGTGAAAGGTGGTTTTGTTACTGGAGATT
TAATTAGTGACTTTGTTGTTTCACTCTTTGTGTGAATCGGAACATCAGTA
TGTGTTTGTGNGCTGGGGATTCAATTAGTGACTTTGTTGTTTCACTCTTT
GTGTGAATCAGAACATCAGTATGTGTTTGTGCTGTAAGCCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018193-exon-sc0000291-1491911889:164065..164857 | TCONS_00018193-exon-sc0000291-1491911889:164065..164857 | Clytia hemisphaerica | exon |
| TCONS_00018193-exon-sc0000291-1510915933:164065..164857 | TCONS_00018193-exon-sc0000291-1510915933:164065..164857 | Clytia hemisphaerica | exon |
| TCONS_00018193-exon-sc0000291-1575043694:164065..164857 | TCONS_00018193-exon-sc0000291-1575043694:164065..164857 | Clytia hemisphaerica | exon |
| TCONS_00018193-exon-sc0000291-1491911889:164929..164956 | TCONS_00018193-exon-sc0000291-1491911889:164929..164956 | Clytia hemisphaerica | exon |
| TCONS_00018193-exon-sc0000291-1510915933:164929..164956 | TCONS_00018193-exon-sc0000291-1510915933:164929..164956 | Clytia hemisphaerica | exon |
| TCONS_00018193-exon-sc0000291-1575043694:164929..164956 | TCONS_00018193-exon-sc0000291-1575043694:164929..164956 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000291 | supercontig | sc0000291:164065..164956 + |
Blast
The following BLAST results are available for this feature:
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