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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018206 ID=TCONS_00018206|Name=TCONS_00018206|organism=Clytia hemisphaerica|type=transcript|length=541bp
CACCCCATCCTTTATCTGGCAAAGCAAGTACCGCCTGGGTAAACGATGCC
TTAGAACCTTCAACGATTTATTTTAGCAATTTAGTGCATGCCTACCTTTT
GAGACATGTTATGGTATTTACAAATAAATGAGAGAATGACACAGGGAGCG
GTGTATATCGTGGGTGAGAATGACATCATATAATTATTTTGTTACTATAA
TACTATTAAAAATGCCCTTTTATAGACATTGAGACATTGTATGGACAGCA
TATCAATTTCTCAGTGAACTGTTGGGAGGAAGACGGCAATAAGAACTATT
TCCTATTTTCCATGCTATTAAATAACGACTTCTACACGCTTTATAGATGA
GCCTTGTATCAAATATGTAATCTGTTAAACAAACGAATTAGAAAGAACTT
AACATGTATCGGCGAGGTATTAATTTCAATTGTATCATAGGTGTGTATGT
AGCGATTTGTAGTATGGGCTAGTACATATGGGCTGTCCATGTAATGAGAT
GTCCATGTAATGAGATGATGTAATTTTTTTGTAGTACTTGG Run BLAST on NCBI transcript from alignment at sc0000291:26696..27562- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018206 ID=TCONS_00018206|Name=TCONS_00018206|organism=Clytia hemisphaerica|type=transcript|length=867bp|location=Sequence derived from alignment at sc0000291:26696..27562- (Clytia hemisphaerica)
CACCCCATCCTTTATCTGGCAAAGCAAGTACCGCCTGGGTAAACGATGCC
TTAGAACCTTCAACGATTTATTTTAGCAATTTAGTGCATGCCTACCTTTT
GAGGTAAGTTTTTTACATTATCTTAAATTTTACAAATTCTTGTTCGGCGC
CGAAATTTTCATGGGGGCGTAGGATGATAACTCAATTACTCAGTTACAGT
GCTCAGCGGTTTGGTATAGTACATTAGTACATAACTTTGATCCAGTATTC
TGTTTAAGTTTGTTCGTTGAGTTTTAGTGCTTGATATCAAAGCACATGGG
CCTACTTAATTTGGAGTTTAAGACTCCGGTACGTGTGATTTTGCCTTTGA
AAACGATGCTTTTGCTTCATGTAAAAACCATGTCGCTTACTCATCCTCGT
TAAATAATATGTGTGTTTTATTTTGACAGACATGTTATGGTATTTACAAA
TAAATGAGAGAATGACACAGGGAGCGGTGTATATCGTGGGTGAGAATGAC
ATCATATAATTATTTTGTTACTATAATACTATTAAAAATGCCCTTTTATA
GACATTGAGACATTGTATGGACAGCATATCAATTTCTCAGTGAACTGTTG
GGAGGAAGACGGCAATAAGAACTATTTCCTATTTTCCATGCTATTAAATA
ACGACTTCTACACGCTTTATAGATGAGCCTTGTATCAAATATGTAATCTG
TTAAACAAACGAATTAGAAAGAACTTAACATGTATCGGCGAGGTATTAAT
TTCAATTGTATCATAGGTGTGTATGTAGCGATTTGTAGTATGGGCTAGTA
CATATGGGCTGTCCATGTAATGAGATGTCCATGTAATGAGATGATGTAAT
TTTTTTGTAGTACTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018206-exon-sc0000291-1575043694:27460..27562 | TCONS_00018206-exon-sc0000291-1575043694:27460..27562 | Clytia hemisphaerica | exon |
| TCONS_00018206-exon-sc0000291-1575043694:26696..27133 | TCONS_00018206-exon-sc0000291-1575043694:26696..27133 | Clytia hemisphaerica | exon |
| TCONS_00018206-exon-sc0000291-1510915933:27460..27562 | TCONS_00018206-exon-sc0000291-1510915933:27460..27562 | Clytia hemisphaerica | exon |
| TCONS_00018206-exon-sc0000291-1510915933:26696..27133 | TCONS_00018206-exon-sc0000291-1510915933:26696..27133 | Clytia hemisphaerica | exon |
| TCONS_00018206-exon-sc0000291-1491911889:27460..27562 | TCONS_00018206-exon-sc0000291-1491911889:27460..27562 | Clytia hemisphaerica | exon |
| TCONS_00018206-exon-sc0000291-1491911889:26696..27133 | TCONS_00018206-exon-sc0000291-1491911889:26696..27133 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000291 | supercontig | sc0000291:26696..27562 - |
Blast
The following BLAST results are available for this feature:
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