TCONS_00018221 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018221
Unique NameTCONS_00018221
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2148

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018221 ID=TCONS_00018221|Name=TCONS_00018221|organism=Clytia hemisphaerica|type=transcript|length=2148bp
gataGAGTGATGTCCATGTCACTAGAAAATAAGACAGAAAGTTTTAAGCA
ATGGTTTGTTAAAGTTGTGTATGAAAATATTAAGTGAATGTGAAAGTTTG
CAGCTGCCATAAGATAGAAAATCCATCATGGCAAATACAAAAGGATCTAT
GAGCATCAAGATTTTAATTAGCCTGGCAATGATGAGTTCTTTACTACAAA
AAACAAATGGCGAAATTTCATGCAAAGATACACTGTttactgaaaatgaa
gatgactTTGAATCTCCAAACATTCCAAGAGACTCAAAAGAGACCGTTGA
TTGTGTATATGATATCAAACTGGCAATGAAATCTCGTTGGATCAAATTGT
CATGGCAACGCTTTGATATACTCGGTACCATTCCTCGTTGTGATGAAGCA
GAATATGTCGAAATATACACAGGGTGCGACGGTCGTTACCTGGTGGCTCG
ATTTTGTTCTTCTAACATGGCTACCTTACCACATGAAATTTATTCTAAGG
AGAGATGTATGAGAATTAAATATCATTCTTCACCTTACCCAGGAAGAAAA
AGAGGAACTGGTTTCAAAGCTATTTACGAGTCATACTCAGAAAGCTTTTC
GCCCTTTATCAAAGCGTGCCAACCagatGCAGAAATCTTGAGAGCGTCAT
CAGGAATCATAGCAAGTCCTGGTTGGCCAAACAAATACGAAAAGAAGAGT
TTCGTTAACGATAAATGTGAATGGTCCCTACAATCTTCAAACAGGGAGCA
AATGATACAAATTAATTTCTTCGATATCGCGTTGACCAATATCGATTATT
TGAAACGAGAAGATGAAGTAAAACTGCAAGGGGAGCTTTCATCACTGTCA
AACAGATTAACACCCTTTAAAAGAATATACAAAGGAAGTTACCTACCCTT
TACTGAAAATACTGAAAGTTACTTAGTTAATGCGACCATGACGATTGATT
CCAGTGATGCAACCTCATGGTCAAACtatgtcagaaacaatggagGTTTC
GCGTTTGGTTATGTCTTTTATGACCCGAGAAAAGGGCTTACAGCACAAAC
ACATACTGATGTTCTGATTCACACAAAGAGTGAAACAACAAAGTCACTAA
TTGAATCCCCAGCNCACAAACACATACTGATGTTCCGATTCACACAAAGA
GTGAAACAACAAAGTCACTAATTAAATCTCCAGTAACAAAACCACCTTTC
ACAGTAGCATCTCCAACAAGCTTTATGGTAACAGCTACAATATCAAGTGA
AAACAAGAACACTACTGATAATTCCATCTGGGATAAAATTCCATGGAAAA
TCATTGCATATGTGGTATTAGCCCTTATCGGAACAGTTGTTTTTGCGCTT
CTTACAGGAGCAGGAGCCAAGAAAGTATGCAATTGTAATTTTTCTATCAA
TCTATCATCACCTAAAGAACAACGAAATAAAGGGTATCAATCTTTCGATC
AATCTCATAACAAGCAAGGAGCTCGCTCACAAGCTCCTTTGCAGACAAAC
GAAGAAGATAATTTGGAAATACAATCTCAGTCACCGTTTGCACCAAATGA
TTATCAATCTAGCTCAGTACCCTCTGCACCAATTCTTGGTGATGGATATT
CATCTCCACTACCAGATTATGCACCACCAAGCTATCAAGAACTCGTGAGA
GACGACCAACGAAACGAGAAAGTTTCTTTACTGTAATATTATTGCAatag
aaaagttttaaattCGAAAGTCTATTGTATGTTTATTTTACAGGAGAAAT
ATTTAgacataggcggttttagactgtaattgtaatttgcttgtttttta
acgagcgttgcactccttcgcatgtttccgacgtacttgctctactGTCT
TAAATCCACCAGTGTTAGAAGTGGGGTGTCGTTTCCTAATGTTCTCCTTG
CTAATCAGATTTGATAAAAAGTGAAAGTCTAACATGTTCGTTAAGGACGG
AAATAAGAATCCTGTACATATTGGTAACGGCTGCTTGTTTCTGACTCGGT
ATCTGATTCATCTTTACTTTGTCATTCATAtaaatcattgaaaatattca
ggatgataatcaatttttgaagagaatattttttatctattttagaattt
tcatCTTGTACATTATATTCCCAAATAAACAacataaaacaaagaaac
Run BLAST on NCBI

protein sequence of TCONS_00018221-protein

>TCONS_00018221-protein ID=TCONS_00018221-protein|Name=TCONS_00018221-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
MANTKGSMSIKILISLAMMSSLLQKTNGEISCKDTLFTENEDDFESPNIP
RDSKETVDCVYDIKLAMKSRWIKLSWQRFDILGTIPRCDEAEYVEIYTGC
DGRYLVARFCSSNMATLPHEIYSKERCMRIKYHSSPYPGRKRGTGFKAIY
ESYSESFSPFIKACQPDAEILRASSGIIASPGWPNKYEKKSFVNDKCEWS
LQSSNREQMIQINFFDIALTNIDYLKREDEVKLQGELSSLSNRLTPFKRI
YKGSYLPFTENTESYLVNATMTIDSSDATSWSNYVRNNGGFAFGYVFYDP
RKGLTAQTHTDVLIHTKSETTKSLIESPXHKHILMFRFTQRVKQQSH
Run BLAST on NCBI

transcript from alignment at sc0000291:163150..169227-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018221 ID=TCONS_00018221|Name=TCONS_00018221|organism=Clytia hemisphaerica|type=transcript|length=6078bp|location=Sequence derived from alignment at sc0000291:163150..169227- (Clytia hemisphaerica)
GATAGAGTGATGTCCATGTCACTAGAAAATAAGACAGAAAGTTTTAAGCA ATGGTTTGTTAAAGTTGTGTATGAAAATATTAAGTGAATGTGAAAGTTTG CAGCTGCCATAAGATAGAAAAGTAAGTAAAAAGCTCCTACAAATTATGCG ATTTATTTCATGACTCGTTTAAATGAAAGAAAATGAAATCTTTGTATCAA TAGAGTGGCGTGCTAGTTATTCTTAGTTTGACCAAAACTCAATAAAAATT AGAAATCTCGAAGCCTTTGTACCCCTTTGTATTCCAATAGAAAAATAGGC AATCGAAAGAATTATAAAAGTTTTTAAAGAGGTACTCCTCTTTGTGGCAA CACAATGTTTAATGTTAAAAGAAATAGGGGACATCAAATTAGTGATCTGA GAAGAATCGGCCGACGAAGGCAGTTACCCCCACAACCCTCCGACACCGTG CAACGACATTGTAATACAAGTTCACTTGATTTTAGTCCATCATGGCAAAT ACAAAAGGATCTATGAGCATCAAGATTTTAATTAGCCTGGCAATGATGAG TTCTTTACTACAAAAAACAAATGGCGAAATTTCATGCAAAGATACACTGT TTACTGAAAATGAAGATGACTTTGAATCTCCAAACATTCCAAGAGACTCA AAAGAGACCGTTGATTGTGTATATGATATCAAACTGGCAATGAAATCTCG TTGGATCAAATTGTCATGGCAACGCTTTGATATACTCGGTACCATTCCTC GTTGTGATGAAGCAGAATATGTCGAAATATACACAGGGTAAATCATACAC GCTTTAGTTGTATATCGAGTGTGAAAATTCTCCCATGGTGATTCGCAATC CAGCGGAAAATTCTCTCCATTTAAAGTATTCACCCCTAAAGAATCCACAT CTATAACACCCCTGTCTCTGTACCCCAGTGGGTATCAAAAGCTCAGAGGG ATGAAATTCAAAACTTTCAAATCCGCTGGGGTGGGTCGAACCACTAAGTA TTTTCAATGGGGTCATAAAATTCTATTGTTCTTTCATCATATTTTCAGTG GGGTGGCTCCTTTAAATTTTTAATTTTACCACTGGGGGTGAGAGAGAAAC TCCCATTTTCCACTGGGGTGACCATTTTCCCCAATGGGGCGAAAGAATGG GCCTTTTTGAGCTATTTTTTCACTGGGGTGACCAGTGGGGCGGATCTCAG TGGGTCACAGAGACGGGCTGTTCTATAGATACACATGCTATTTCAAGAGT GTATCACCAGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTTTTTTCAAACTTTCATTTTGACTTTTTCCGACAAA AACGCCCACCGCCTTCGGGCGCCCAACATTTTCCGCCCAAATCTGTCCAA AAACGCCAAACCGCTCCACCCATCCGCCCATTCAAGAAATATTTTGACTT TTTCAAGACTTTTTTTTGACTTTTATTTGACTTTTTGACTTTTTTCTAAG AATTTTTGAATTTTTCTTTGACTTTTTGACTTTATTTTTGACTTTTTGAC TTTTTCTTTGACTTTTTGACTTTTTTTTAACTTTTTTGACTTTTTTTTTG ACTTTTTGTAGAGGTGTACGATAATTTTTCGAGGGATTTACCCCTCGGGT TATAGCTACTCTTGACCCTTTTAGGAAAGCAGCCTCCCCGAAGATTCCTC TCCTTCTCTCAAAGATCCTGCTCCCTTATACATTCTTCATCAGCAGCTTT CTTTGGCTTATATGATGTTCTAAAAAATCTCTAACGTCGAATTTATTTCC TCTCTCAGGTGCGACGGTCGTTACCTGGTGGCTCGATTTTGTTCTTCTAA CATGGCTACCTTACCACATGAAATTTATTCTAAGGAGAGATGTATGAGAA TTAAATATCATTCTTCACCTTACCCAGGAAGAAAAAGAGGAACTGGTTTC AAAGCTATTTACGAGTCATACTCAGAAAGCTTTTCGCCCTTTATCAAAGC GTGCCAACCGTAAGTTACATTCTTGTTAGTCCAACCCAACTGCTTGGAAC AATGGACATTACTCACTATTTTCAACAATTCATGGTAATTTTCCTTTCTA AGCATTGTATACTAAGACAATGTAATCCGTTTTTCATCTCAATTCAAGAG TCTGAATATCTTTCAATCCCGTTTCTATTTTCAATTTTGTTTGCTGTCAA GATATGTAAAACTTTAAACGAGAATCATTTTATTTTTTAGAGATGCAGAA ATCTTGAGAGCGTCATCAGGAATCATAGCAAGTCCTGGTTGGCCAAACAA ATACGAAAAGAAGAGTTTCGTTAACGATAAATGTGAATGGTCCCTACAAT CTTCAAACAGGGAGCAAATGATACAAATTAATTTCTTCGATATCGCGTTG ACCAATATCGATTATTTGAAACGAGAAGATGAAGTAAAACTGCAAGGTGA ATTTTCTTTGTTAATTCAACAGCGAGTAGTGGAAGCGAATACTTGCCTTG CTCAAAAGAGTTTTTGATTAATAAAGATTTAACCTGTGGAGACGGATTAT AAGAATTTTATCGTGCATGTGTCAATCATATTACTATTCAAAGAACAAAA CATGAAGATCATTACAACGATAGCTTTGATACTTCTTGTGTTGTGATGCC TGACTCATTTGAAGAATGGAACGGGCGTAAATAATGGGCTTGAAAAGTAA AGATTGCCTGGAAAAGGAACCACTATCCATTGGTCCATGTACACATATAT TTCCGGTTAAATAGCCTTTCATTTTTGGTCTGTTTGAAAAATTTGTTTTG TTTTATTGTTTCGTCATCTAGGGGAGCTTTCATCACTGTCAAACAGATTA ACACCCTTTAAAAGAATATACAAAGGAAGTTACCTACCCTTTACTGAAAA TACTGAAAGTTACTTAGTTAATGCGACCATGACGATTGATTCCAGTGATG CAACCTCATGGTCAAACTATGTCAGAAACAATGGAGGTTTCGCGTTTGGT TATGTCTTTTATGACCCGAGAAAAGGTATTTTACACTACTTTTACGCTAT TGGTAGTGAAACAGGGTTACTAAGAAGAACATATCCCAGGAGACACTTAG GCAAATTGGGTATGGGGCAAACGTTTGGCTGGTCAGGGTCCCTTTTTACA CCCCTGTCTCATAGCCCAAGCGGAACTGTTTCCCACAGTGGGGACAAACA TTTTTATTTCCCAGTGAAACTGACAGTAGTGTAATTTTGTTACTGACAAA TAAAATTATGATATTGATACAGCTGTTCGACTTTTTGTTGACATCGAGCA CTCTTTACAACGGAAATAACTTGCTTTGTTTCTATTTCCCAATGATACAA GTTCTATTGTTCCAAGCTTAAAAAACCCAGTGGGGATGGTTTAAGCTTTC ATGGTTTAAGAGTGCAATTTTTTACATTGAATTTCAAACGAGAATGAGAC CAAACTTAGTTTACGTTTTGAAGATAACTGAAAGGGTCCACGTTTCAAAC TCCAGCAGCATGTTGGCCGTCAAGGTCACTGCCCCCGGGAACATATCTCA ATCTAAGTGTTAACCTTTAAAATACGGCAAAACATTTTTAGTGAGAGTAT TCTCGACTCTCAGAGAGTTTGTGTTATGGATAATTAAATGCATTTTGTAC TTCTACAACCATTATTTTCATAGGGCTTACAGCACAAACACATACTGATG TTCTGATTCACACAAAGAGTGAAACAACAAAGTCACTAATTGAATCCCCA GCNCACAAACACATACTGATGTTCCGATTCACACAAAGAGTGAAACAACA AAGTCACTAATTAAATCTCCAGTAACAAAACCACCTTTCACAGTAGCATC TCCAACAAGCTTTATGGTAACAGCTACAATATCAAGTGAAAACAAGAACA CTACTGATAATTCCATCTGGGATAAAATTCCATGGAAAATCATTGCATAT GTGGTATTAGCCCTTATCGGAACAGTTGTTTTTGCGCTTCTTACAGGAGC AGGAGCCAAGAAAGTATGCAATTGTAATTTTTCTATCAATCTATCATCAC CTAAAGAACAACGAAATAAAGGGTATCAATCTTTCGATCAATCTCATAAC AAGCAAGGAGCTCGCTCACAAGCTCCTTTGCAGACAAACGAAGAAGATAA TTTGGAAATACAATCTCAGTCACCGTTTGCACCAAATGGTAAGAAGTCAT TTTTCTGATTCGTTTGATATTTTTCTTGATTATAACCATAGCAAAAAATT AGGCATTCTTAGCGAAAAGTAACGTTATTCTCATCGATTTTAAAGCTCCG AATGGGCTAGAGTTGGATGGAAAAGAAAACCACTTGTTTCCCATCAAAAA ATCGTAATCTGCATTTTACACAAATGGATTGAAAGTAAAATCTATTAACA GATTTCGGAAATCATGCTGCATGAAAACAAAGAAAGCACTAGATTCAATC TGTTATTCTTAAAGCGGCGTAAGTCTTAAGGCTTTTTTATTTTTTTTGCT TGAAAAAGGTTGAAGGTCCTCTCTAGCCTTTCGGGGCTTTAAAATCAATG GAATACCAAATAAACAATTATTCAGTAGAAAATGTACAATAAGATGTGGA AGTATACCTGTACATTCGGTGTATGACTTAAGATATCATATCAAAAGAAA GGCTAAAGCTTTTTTTTTCCAAATTAATTAATTCAAAATTAATTAAAGTA ACAGAGACCTAACGATAATTATCTTAAAAATTAGCATTTGTTTTCGTGAC GTTTTCGCTTACGAAGTGTGTTTCCATGACAGCTTATGACCGAAATACTG CTCCATATTTTTTATCTCTCTGATTCATTCGTTCTCTGATGCAAATATTG TAAAATATAGCCATCTTATCTTATTTTAGATTATCAATCTAGCTCAGTAC CCTCTGCACCAATTCTTGGTGATGGATATTCATCTCCACTACCAGATTAT GCACCACCAAGCTATCAAGAACTCGTGAGAGACGACCAACGAAACGAGAA AGTTTCTTTACTGTAATATTATTGCAATAGAAAAGTTTTAAATTCGAAAG TCTATTGTATGTTTATTTTACAGGAGAAATATTTAGACATAGGCGGTTTT AGACTGTAATTGTAATTTGCTTGTTTTTTAACGAGCGTTGCACTCCTTCG CATGTTTCCGACGTACTTGCTCTACTGTCTTAAATCCACCAGTGTTAGAA GTGGGGTGTCGTTTCCTAATGTTCTCCTTGCTAATCAGATTTGATAAAAA GTGAAAGTCTAACATGTTCGTTAAGGACGGAAATAAGAATCCTGTACATA TTGGTAACGGCTGCTTGTTTCTGACTCGGTATCTGATTCATCTTTACTTT GTCATTCATATAAATCATTGAAAATATTCAGGATGATAATCAATTTTTGA AGAGAATATTTTTTATCTATTTTAGAATTTTCATCTTGTACATTATATTC CCAAATAAACAACATAAAACAAAGAAAC

Coding sequence (CDS) from alignment at sc0000291:163150..169227-

>TCONS_00018221 ID=TCONS_00018221|Name=TCONS_00018221|organism=Clytia hemisphaerica|type=CDS|length=5220bp|location=Sequence derived from alignment at sc0000291:163150..169227- (Clytia hemisphaerica)
GGCTTACAGCACAAACACATACTGATGTTCTGATTCACACAAAGAGTGAA
ACAACAAAGTCACTAATTGAATCCCCAGCNCACAAACACATACTGATGTT
CCGATTCACACAAAGAGTGAAACAACAAAGTCACTAAGGGAGCTTTCATC
ACTGTCAAACAGATTAACACCCTTTAAAAGAATATACAAAGGAAGTTACC
TACCCTTTACTGAAAATACTGAAAGTTACTTAGTTAATGCGACCATGACG
ATTGATTCCAGTGATGCAACCTCATGGTCAAACTATGTCAGAAACAATGG
AGGTTTCGCGTTTGGTTATGTCTTTTATGACCCGAGAAAAGAGATGCAGA
AATCTTGAGAGCGTCATCAGGAATCATAGCAAGTCCTGGTTGGCCAAACA
AATACGAAAAGAAGAGTTTCGTTAACGATAAATGTGAATGGTCCCTACAA
TCTTCAAACAGGGAGCAAATGATACAAATTAATTTCTTCGATATCGCGTT
GACCAATATCGATTATTTGAAACGAGAAGATGAAGTAAAACTGCAAGGTG
CGACGGTCGTTACCTGGTGGCTCGATTTTGTTCTTCTAACATGGCTACCT
TACCACATGAAATTTATTCTAAGGAGAGATGTATGAGAATTAAATATCAT
TCTTCACCTTACCCAGGAAGAAAAAGAGGAACTGGTTTCAAAGCTATTTA
CGAGTCATACTCAGAAAGCTTTTCGCCCTTTATCAAAGCGTGCCAACCAT
GGCAAATACAAAAGGATCTATGAGCATCAAGATTTTAATTAGCCTGGCAA
TGATGAGTTCTTTACTACAAAAAACAAATGGCGAAATTTCATGCAAAGAT
ACACTGTTTACTGAAAATGAAGATGACTTTGAATCTCCAAACATTCCAAG
AGACTCAAAAGAGACCGTTGATTGTGTATATGATATCAAACTGGCAATGA
AATCTCGTTGGATCAAATTGTCATGGCAACGCTTTGATATACTCGGTACC
ATTCCTCGTTGTGATGAAGCAGAATATGTCGAAATATACACAGGGGCTTA
CAGCACAAACACATACTGATGTTCTGATTCACACAAAGAGTGAAACAACA
AAGTCACTAATTGAATCCCCAGCNCACAAACACATACTGATGTTCCGATT
CACACAAAGAGTGAAACAACAAAGTCACTAAGGGAGCTTTCATCACTGTC
AAACAGATTAACACCCTTTAAAAGAATATACAAAGGAAGTTACCTACCCT
TTACTGAAAATACTGAAAGTTACTTAGTTAATGCGACCATGACGATTGAT
TCCAGTGATGCAACCTCATGGTCAAACTATGTCAGAAACAATGGAGGTTT
CGCGTTTGGTTATGTCTTTTATGACCCGAGAAAAGAGATGCAGAAATCTT
GAGAGCGTCATCAGGAATCATAGCAAGTCCTGGTTGGCCAAACAAATACG
AAAAGAAGAGTTTCGTTAACGATAAATGTGAATGGTCCCTACAATCTTCA
AACAGGGAGCAAATGATACAAATTAATTTCTTCGATATCGCGTTGACCAA
TATCGATTATTTGAAACGAGAAGATGAAGTAAAACTGCAAGGTGCGACGG
TCGTTACCTGGTGGCTCGATTTTGTTCTTCTAACATGGCTACCTTACCAC
ATGAAATTTATTCTAAGGAGAGATGTATGAGAATTAAATATCATTCTTCA
CCTTACCCAGGAAGAAAAAGAGGAACTGGTTTCAAAGCTATTTACGAGTC
ATACTCAGAAAGCTTTTCGCCCTTTATCAAAGCGTGCCAACCATGGCAAA
TACAAAAGGATCTATGAGCATCAAGATTTTAATTAGCCTGGCAATGATGA
GTTCTTTACTACAAAAAACAAATGGCGAAATTTCATGCAAAGATACACTG
TTTACTGAAAATGAAGATGACTTTGAATCTCCAAACATTCCAAGAGACTC
AAAAGAGACCGTTGATTGTGTATATGATATCAAACTGGCAATGAAATCTC
GTTGGATCAAATTGTCATGGCAACGCTTTGATATACTCGGTACCATTCCT
CGTTGTGATGAAGCAGAATATGTCGAAATATACACAGGGGCTTACAGCAC
AAACACATACTGATGTTCTGATTCACACAAAGAGTGAAACAACAAAGTCA
CTAATTGAATCCCCAGCNCACAAACACATACTGATGTTCCGATTCACACA
AAGAGTGAAACAACAAAGTCACTAAGGGAGCTTTCATCACTGTCAAACAG
ATTAACACCCTTTAAAAGAATATACAAAGGAAGTTACCTACCCTTTACTG
AAAATACTGAAAGTTACTTAGTTAATGCGACCATGACGATTGATTCCAGT
GATGCAACCTCATGGTCAAACTATGTCAGAAACAATGGAGGTTTCGCGTT
TGGTTATGTCTTTTATGACCCGAGAAAAGAGATGCAGAAATCTTGAGAGC
GTCATCAGGAATCATAGCAAGTCCTGGTTGGCCAAACAAATACGAAAAGA
AGAGTTTCGTTAACGATAAATGTGAATGGTCCCTACAATCTTCAAACAGG
GAGCAAATGATACAAATTAATTTCTTCGATATCGCGTTGACCAATATCGA
TTATTTGAAACGAGAAGATGAAGTAAAACTGCAAGGTGCGACGGTCGTTA
CCTGGTGGCTCGATTTTGTTCTTCTAACATGGCTACCTTACCACATGAAA
TTTATTCTAAGGAGAGATGTATGAGAATTAAATATCATTCTTCACCTTAC
CCAGGAAGAAAAAGAGGAACTGGTTTCAAAGCTATTTACGAGTCATACTC
AGAAAGCTTTTCGCCCTTTATCAAAGCGTGCCAACCATGGCAAATACAAA
AGGATCTATGAGCATCAAGATTTTAATTAGCCTGGCAATGATGAGTTCTT
TACTACAAAAAACAAATGGCGAAATTTCATGCAAAGATACACTGTTTACT
GAAAATGAAGATGACTTTGAATCTCCAAACATTCCAAGAGACTCAAAAGA
GACCGTTGATTGTGTATATGATATCAAACTGGCAATGAAATCTCGTTGGA
TCAAATTGTCATGGCAACGCTTTGATATACTCGGTACCATTCCTCGTTGT
GATGAAGCAGAATATGTCGAAATATACACAGGGGCTTACAGCACAAACAC
ATACTGATGTTCTGATTCACACAAAGAGTGAAACAACAAAGTCACTAATT
GAATCCCCAGCNCACAAACACATACTGATGTTCCGATTCACACAAAGAGT
GAAACAACAAAGTCACTAAGGGAGCTTTCATCACTGTCAAACAGATTAAC
ACCCTTTAAAAGAATATACAAAGGAAGTTACCTACCCTTTACTGAAAATA
CTGAAAGTTACTTAGTTAATGCGACCATGACGATTGATTCCAGTGATGCA
ACCTCATGGTCAAACTATGTCAGAAACAATGGAGGTTTCGCGTTTGGTTA
TGTCTTTTATGACCCGAGAAAAGAGATGCAGAAATCTTGAGAGCGTCATC
AGGAATCATAGCAAGTCCTGGTTGGCCAAACAAATACGAAAAGAAGAGTT
TCGTTAACGATAAATGTGAATGGTCCCTACAATCTTCAAACAGGGAGCAA
ATGATACAAATTAATTTCTTCGATATCGCGTTGACCAATATCGATTATTT
GAAACGAGAAGATGAAGTAAAACTGCAAGGTGCGACGGTCGTTACCTGGT
GGCTCGATTTTGTTCTTCTAACATGGCTACCTTACCACATGAAATTTATT
CTAAGGAGAGATGTATGAGAATTAAATATCATTCTTCACCTTACCCAGGA
AGAAAAAGAGGAACTGGTTTCAAAGCTATTTACGAGTCATACTCAGAAAG
CTTTTCGCCCTTTATCAAAGCGTGCCAACCATGGCAAATACAAAAGGATC
TATGAGCATCAAGATTTTAATTAGCCTGGCAATGATGAGTTCTTTACTAC
AAAAAACAAATGGCGAAATTTCATGCAAAGATACACTGTTTACTGAAAAT
GAAGATGACTTTGAATCTCCAAACATTCCAAGAGACTCAAAAGAGACCGT
TGATTGTGTATATGATATCAAACTGGCAATGAAATCTCGTTGGATCAAAT
TGTCATGGCAACGCTTTGATATACTCGGTACCATTCCTCGTTGTGATGAA
GCAGAATATGTCGAAATATACACAGGGGCTTACAGCACAAACACATACTG
ATGTTCTGATTCACACAAAGAGTGAAACAACAAAGTCACTAATTGAATCC
CCAGCNCACAAACACATACTGATGTTCCGATTCACACAAAGAGTGAAACA
ACAAAGTCACTAAGGGAGCTTTCATCACTGTCAAACAGATTAACACCCTT
TAAAAGAATATACAAAGGAAGTTACCTACCCTTTACTGAAAATACTGAAA
GTTACTTAGTTAATGCGACCATGACGATTGATTCCAGTGATGCAACCTCA
TGGTCAAACTATGTCAGAAACAATGGAGGTTTCGCGTTTGGTTATGTCTT
TTATGACCCGAGAAAAGAGATGCAGAAATCTTGAGAGCGTCATCAGGAAT
CATAGCAAGTCCTGGTTGGCCAAACAAATACGAAAAGAAGAGTTTCGTTA
ACGATAAATGTGAATGGTCCCTACAATCTTCAAACAGGGAGCAAATGATA
CAAATTAATTTCTTCGATATCGCGTTGACCAATATCGATTATTTGAAACG
AGAAGATGAAGTAAAACTGCAAGGTGCGACGGTCGTTACCTGGTGGCTCG
ATTTTGTTCTTCTAACATGGCTACCTTACCACATGAAATTTATTCTAAGG
AGAGATGTATGAGAATTAAATATCATTCTTCACCTTACCCAGGAAGAAAA
AGAGGAACTGGTTTCAAAGCTATTTACGAGTCATACTCAGAAAGCTTTTC
GCCCTTTATCAAAGCGTGCCAACCATGGCAAATACAAAAGGATCTATGAG
CATCAAGATTTTAATTAGCCTGGCAATGATGAGTTCTTTACTACAAAAAA
CAAATGGCGAAATTTCATGCAAAGATACACTGTTTACTGAAAATGAAGAT
GACTTTGAATCTCCAAACATTCCAAGAGACTCAAAAGAGACCGTTGATTG
TGTATATGATATCAAACTGGCAATGAAATCTCGTTGGATCAAATTGTCAT
GGCAACGCTTTGATATACTCGGTACCATTCCTCGTTGTGATGAAGCAGAA
TATGTCGAAATATACACAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010241XLOC_010241Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018221-exon-sc0000291-1575043694:169107..169227TCONS_00018221-exon-sc0000291-1575043694:169107..169227Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1575043694:168441..168742TCONS_00018221-exon-sc0000291-1575043694:168441..168742Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1575043694:166619..166819TCONS_00018221-exon-sc0000291-1575043694:166619..166819Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1575043694:166182..166387TCONS_00018221-exon-sc0000291-1575043694:166182..166387Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1575043694:165603..165806TCONS_00018221-exon-sc0000291-1575043694:165603..165806Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1575043694:164440..164954TCONS_00018221-exon-sc0000291-1575043694:164440..164954Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1575043694:163150..163748TCONS_00018221-exon-sc0000291-1575043694:163150..163748Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1510915933:169107..169227TCONS_00018221-exon-sc0000291-1510915933:169107..169227Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1510915933:168441..168742TCONS_00018221-exon-sc0000291-1510915933:168441..168742Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1510915933:166619..166819TCONS_00018221-exon-sc0000291-1510915933:166619..166819Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1510915933:166182..166387TCONS_00018221-exon-sc0000291-1510915933:166182..166387Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1510915933:165603..165806TCONS_00018221-exon-sc0000291-1510915933:165603..165806Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1510915933:164440..164954TCONS_00018221-exon-sc0000291-1510915933:164440..164954Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1510915933:163150..163748TCONS_00018221-exon-sc0000291-1510915933:163150..163748Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1491911889:169107..169227TCONS_00018221-exon-sc0000291-1491911889:169107..169227Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1491911889:168441..168742TCONS_00018221-exon-sc0000291-1491911889:168441..168742Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1491911889:166619..166819TCONS_00018221-exon-sc0000291-1491911889:166619..166819Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1491911889:166182..166387TCONS_00018221-exon-sc0000291-1491911889:166182..166387Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1491911889:165603..165806TCONS_00018221-exon-sc0000291-1491911889:165603..165806Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1491911889:164440..164954TCONS_00018221-exon-sc0000291-1491911889:164440..164954Clytia hemisphaericaexon
TCONS_00018221-exon-sc0000291-1491911889:163150..163748TCONS_00018221-exon-sc0000291-1491911889:163150..163748Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018221-proteinTCONS_00018221-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:163150..169227 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.155248 0.115617 2.1366 2.73857 4.52464 3.34503 5.62557 5.22876 14.372 14.3377 20.1461 20.0783 4.64245 8.05714 21.1059 16.8219 1.25878 0.306996 0 0 0.349458 0.415843 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000859CUB_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018221 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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