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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018237 ID=TCONS_00018237|Name=TCONS_00018237|organism=Clytia hemisphaerica|type=transcript|length=1442bp
ATAAGCCGTTAAAAAAGTGCAGCATTGTATTGGTTATCGATCTTGACTGC
CGTTCAGGAAGTCGGGGCTCGATTCTCACTCGGTGTTTAGATTCAGTTGG
CAAGAGAATGTACCTTCATTTTCACAGGCCAACCCTTCCGTGTGAGGAGA
ATTGGGTAGATAGAAACTCAAGAAACCTGTCGGTGACTGTGCCAGGTATC
GATTCCACAGTACATCGTGGATGAGGTGAGAGTGCGCTGGCCTTGTTCCT
TAGTGAGTGGTTCACGCCGGATTAACGCACTTGATCTGAAAAACTGTGTG
TCGATATCTGGCAAGCTGACAGACAGTAGAAACTACAGCGTAATACAGTT
CTAACGAGACGACTTCTAGACCGCTCAATACAGAACCGGGTATCCTCTGT
AAGGAGAATCCAGACACTAGGGACCTTTAGCATCTAAGACGGCGACTTGA
AGTGGGATGTGaagtaaatcttaaaatcaaatgGCAAATTTTATCCGATT
TTAGCTAGATTTAATATCAcatggaaaaatttgaaatgcagtcaagtttt
tataaaaaattacgtTATGATTCTCGAGGGATTTATTCATTTAAAACTAT
TGTACTCTTCCTTTACCGTATTTGTTCTAAACACGACGtcacaaaagaat
tttgaagTCGTCTTGAGATTTGAAAACGTCTATTAATGGTATTCTCATGA
GAAAATAAATATGAAAAGAATTGAATCTAGCTGCGATCCAGATATCAATT
CCTTAGggctttctttttgttcaatctTGCCGTACTTTTTCCAATCTGCC
GTTCTAGATGCTAAAGGTCCCTACTATCATCATCAAGACGGATTTAAATT
CCGAAATTTTAGATTcaaatttaagggctctgaccagaGTCAATAAATTC
GTTATGGGATTTGTTGATAAAACTATTTTTGGgttccttgacacttttaa
taaaaaattgcTGTTACAAGTTGTTTGAAAACTTAttcaagagtaattaa
gaatttaattacaaaaatgacattatggtcgtgttcagacatgaaagttt
aagtttaaggcttaagtagtactaagttgatatgggaattaagaaatgca
acgacttaattgctatttcatcttttagatagattacataagagaggaaa
aaggaatccccttttgaaTGTTTGAGTAAGGCTTAGTTTTTGATAGAGGA
GATCGCAAACAGTTATTTCCGACGCcaagagagactttgaaaggtgaaaa
acccgacccttaccgtccgcacatatcCCCCGGGGGCAAAGGCAAATGGG
TTtcaattaagggctctgaccatattTGCCATCTACAAAATATAGACTTC
TGTCTGATATAAcgaacaaaactatggcatgttatatattttctgttagg
ccaattattcctgaaactgaaaatttaaaaatggcaatgaaa Run BLAST on NCBI transcript from alignment at sc0000291:105271..106712 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018237 ID=TCONS_00018237|Name=TCONS_00018237|organism=Clytia hemisphaerica|type=transcript|length=1442bp|location=Sequence derived from alignment at sc0000291:105271..106712 (Clytia hemisphaerica)
tttcattgccatttttaaattttcagtttcaggaataattggcctaacag
aaaatatataacatgccatagttttgttcgTTATATCAGACAGAAGTCTA
TATTTTGTAGATGGCAaatatggtcagagcccttaattgaAACCCATTTG
CCTTTGCCCCCGGGGgatatgtgcggacggtaagggtcgggtttttcacc
tttcaaagtctctcttgGCGTCGGAAATAACTGTTTGCGATCTCCTCTAT
CAAAAACTAAGCCTTACTCAAACAttcaaaaggggattcctttttcctct
cttatgtaatctatctaaaagatgaaatagcaattaagtcgttgcatttc
ttaattcccatatcaacttagtactacttaagccttaaacttaaactttc
atgtctgaacacgaccataatgtcatttttgtaattaaattcttaattac
tcttgaaTAAGTTTTCAAACAACTTGTAACAgcaattttttattaaaagt
gtcaaggaacCCAAAAATAGTTTTATCAACAAATCCCATAACGAATTTAT
TGACtctggtcagagcccttaaatttgAATCTAAAATTTCGGAATTTAAA
TCCGTCTTGATGATGATAGTAGGGACCTTTAGCATCTAGAACGGCAGATT
GGAAAAAGTACGGCAagattgaacaaaaagaaagccCTAAGGAATTGATA
TCTGGATCGCAGCTAGATTCAATTCTTTTCATATTTATTTTCTCATGAGA
ATACCATTAATAGACGTTTTCAAATCTCAAGACGActtcaaaattctttt
gtgaCGTCGTGTTTAGAACAAATACGGTAAAGGAAGAGTACAATAGTTTT
AAATGAATAAATCCCTCGAGAATCATAacgtaattttttataaaaacttg
actgcatttcaaatttttccatgTGATATTAAATCTAGCTAAAATCGGAT
AAAATTTGCcatttgattttaagatttacttCACATCCCACTTCAAGTCG
CCGTCTTAGATGCTAAAGGTCCCTAGTGTCTGGATTCTCCTTACAGAGGA
TACCCGGTTCTGTATTGAGCGGTCTAGAAGTCGTCTCGTTAGAACTGTAT
TACGCTGTAGTTTCTACTGTCTGTCAGCTTGCCAGATATCGACACACAGT
TTTTCAGATCAAGTGCGTTAATCCGGCGTGAACCACTCACTAAGGAACAA
GGCCAGCGCACTCTCACCTCATCCACGATGTACTGTGGAATCGATACCTG
GCACAGTCACCGACAGGTTTCTTGAGTTTCTATCTACCCAATTCTCCTCA
CACGGAAGGGTTGGCCTGTGAAAATGAAGGTACATTCTCTTGCCAACTGA
ATCTAAACACCGAGTGAGAATCGAGCCCCGACTTCCTGAACGGCAGTCAA
GATCGATAACCAATACAATGCTGCACTTTTTTAACGGCTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018237-exon-sc0000291-1491911889:105271..106712 | TCONS_00018237-exon-sc0000291-1491911889:105271..106712 | Clytia hemisphaerica | exon |
| TCONS_00018237-exon-sc0000291-1510915933:105271..106712 | TCONS_00018237-exon-sc0000291-1510915933:105271..106712 | Clytia hemisphaerica | exon |
| TCONS_00018237-exon-sc0000291-1575043694:105271..106712 | TCONS_00018237-exon-sc0000291-1575043694:105271..106712 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000291 | supercontig | sc0000291:105271..106712 . |
Blast
The following BLAST results are available for this feature:
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