TCONS_00018257 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018257
Unique NameTCONS_00018257
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1176

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018257 ID=TCONS_00018257|Name=TCONS_00018257|organism=Clytia hemisphaerica|type=transcript|length=1176bp
ttctcccaCGAAGGTATGAAAAGATGTcaagtttttgagtttttgcTTCG
CAATAATGAAGTTTAAATTGATGTATATCTCTTTTGCATTTATTCTGTTG
GTTTTCACCAAACAAATTTTTGCAAGCAACATTATTCGTCGCACATCGTC
AAATGAAGGTACATTTCAAATCCGACGTCGAGGAAAACGTATCGCAACAA
CACCTTATAAAACATTCGAAGTACCCGAACTGTTCGATTGCGCCGACGCA
TGTGTATACGACACGCCCTGCAAATCTATCAATGTCAATAAAAATAGTTC
ACCCTGGATTTGTGAATTAGTCTCGGACGACCGGAATACAAAAGACGAAT
ATGTGGATGCACCCGGGGTCGATCATTATGATACTGGTTGGACCTCAATA
AGCATCATTACCAATTATGATAACAACATGTGTCTTGTATCGAAGTACTA
TCGTTGTAATTTACCAACCGACTCGGTTTGGGAACACATTGTCGTGGAAA
CTGACATGACTGTTTGCAATGAAAACCCTGCAGCGTTATTCCATTTCGAT
AGAGACACTGGTCGTCTGGTACACCATTGCTCTGGATATCAAGTTTGCCC
TCTCCATCCTTTTGGTTCAACTTCTTGGGTTGGAATCGTTAAAACCGGTT
GCAATTGGTACCAGGATATCAATGATTATTTTCATACATGGCGTCGTAAT
TTTCTTGGCTACTTGTATAGTAACAACCTTTGCCcacattttcaattttg
ggaTTGGGCTCAAGGAAAACCGCTAATGCTTTATCATTGCGAGCACTGGG
AGCCAAGACGTGTAATGAAATTCCCTTCAATTCcaCACGGACCAGTATAT
GTTCAAGTTGTGATGGGACTTTCGTACAGCAAAAACTGGGATGAATACAT
TAACCATCCAAAGTTTACCGGTGCACAAGCACCAGATTTTGTTGGCCACC
AAGACGATTTCTTTACAGCAAGCGGATCCTGGACAGAAGGTTATGGAATG
CGCTTTGAGGCTATTTTTGTTGCTCCATCAACTGGTGATTACAAATTCCG
TATTTATTGCGATGATATATGCATGTTCAATATGGGTACATCTCCGCAAA
CAAAAACCACCATCATTGATTACAGAACGCCCGACATGACGCCCAATTAT
TTGGCATTTACGTAAGTATGCTTTTc
Run BLAST on NCBI

protein sequence of TCONS_00018257-protein

>TCONS_00018257-protein ID=TCONS_00018257-protein|Name=TCONS_00018257-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
MKFKLMYISFAFILLVFTKQIFASNIIRRTSSNEGTFQIRRRGKRIATTP
YKTFEVPELFDCADACVYDTPCKSINVNKNSSPWICELVSDDRNTKDEYV
DAPGVDHYDTGWTSISIITNYDNNMCLVSKYYRCNLPTDSVWEHIVVETD
MTVCNENPAALFHFDRDTGRLVHHCSGYQVCPLHPFGSTSWVGIVKTGCN
WYQDINDYFHTWRRNFLGYLYSNNLCPHFQFWDWAQGKPLMLYHCEHWEP
RRVMKFPSIPHGPVYVQVVMGLSYSKNWDEYINHPKFTGAQAPDFVGHQD
DFFTASGSWTEGYGMRFEAIFVAPSTGDYKFRIYCDDICMFNMGTSPQTK
TTIIDYRTPDMTPNYLAFT
Run BLAST on NCBI

transcript from alignment at sc0000295:68725..73613+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018257 ID=TCONS_00018257|Name=TCONS_00018257|organism=Clytia hemisphaerica|type=transcript|length=4889bp|location=Sequence derived from alignment at sc0000295:68725..73613+ (Clytia hemisphaerica)
ttctcccaCGAAGGTATGAAAAGATGTcaagtttttgagtttttgcTTCG CAATAATGAAGTTTAAATTGATGTATATCTCTTTTGCATTTATTCTGTTG GTTTTCACCAAACAAATTTTTGCAAGCAACATTATTCGTCGCACATCGTC AAATGAAGGTAGCTATATTTTTACCCATACTCTAAAGTGTGTTTTCATCT AAAGAAAATCTTCAGAAACCGAGAAACATAGATAATAACTTATTGACTTG AGAATTGCTATTGTATCCAGGCTGTTGGACCTCAAAAATTtacttatttt cttctttttttttggacctcaaaattttcaagtttaatcAACTTTCCTAT TAAGAATCTAATTTAGAGCACACTTTATAGGAAATTTCCTCTTATCTTCA ATATCCTAAGCTCCAATCAAAAAATTAGGTTTGAGGATTTTAGCTCATAT ACAGCACCtcaccccgagaatgtagtaaaccccgagaatgtaggtttctc attttttagcatggtagccctaacgatagttcaacttcataaaaagttgt ttcagagcatactgttacatattactgattatttctagacataaaatatt aacttgaattgattttttcaggcgaaaatctgattcgaagttgattggat actactcgaattgagacattttttaaataaatcctctctaaatcgaaatc tattggaattaagttatgatgatagggtattttcttattcctaatgaaca aaggaaatgtggaaaatagtccatttcaatatttattgttctaagttaga tattttaacgaaaatgtttgacctacctttGGGGTTAGTTGACCTACAAT TTGGGAGCcttcataacccgacataaaaagtctgtcaaattatataaaac ttgtttgttgtactttcataacatgaaagtattacctgagagatgaataa tgttgacattttgagcttttacgacgtgtcctagacccgctgggacccca gcctaatcagaaaatttgcctaagttggAATGGATTCCCATTGggaattt agtagaaattttttgacccgatgtgggaaaagttccaccggggctgtgag gcaggggtgttgttacattattcacatattttaacacagaNAAAAATTta cttattttctttattttttttggacctcaaaattttcaagtttaatcAAC TTTCCTATTAAGAATCTAATTTAGAGCACACTTTATAGGAAATTTCCTCT TATCTTCAATATCCTAAGCTCCAATCAAAAAATTAGGTTTGAGGATTTTA GCTCATATAGAATCTGTTCCGCTTTTTTTCCGAACATGTAGAAAATTGGA ATGATCTGGAGtatttacaagatacttcactcaTTGGTCATTTGATGTAA TatagatgacgcgttctttataAAAAGTAACAATTGGTTCACTGTATTAA GGGTTAACGACCataaccaaatcaaataagtaTTTGCAAAAACTCCAACT TGTCCCAGCAAATTGGCAGACTCataaattttggtaaaatacgGCAGAAT TGATCTTGGATATTGACTGTATAATAAAACCAATACGAGATCAAACATGA AACACATCAACAGAAAAACGTGCTTAGGCTAGACCAATTTagtttgttgt tctacgggcacgaccgaccctatttttgctaaaatcgaaaaaataataat attgaatttccgctacaatatattttacacactcgttatttgtaaGGATC AAGTTTGAATAAAGCCTAAAATCAATTCAagagattgaaaaatttagaaa atcaagcattccatacactaaaatttcattatgatcttcatcgaagataa aaaaagtgagtttttgatccagatattttttgaaaaatattttcggtacc ttaccaaccaattaatgaaaaattcattcttattttaccgaccgaccgac ccatatttttctaacgatctgcccgtaaagcaacaaattaaattgatttc GCCTTACAAAAGAAATCTGAAAGAAAACTACAGAGTAGACGAATTATCTA TTGTTATGGAAAATTTTCCACTAGGTACATTTCAAATCCGACGTCGAGGA AAACGTATCGCAACAACACCTTATAAAACATTCGAAGTACCCGAACTGTT CGATTGCGCCGACGCATGTGTATACGACACGCCCTGCAAATCTATCAATG TCAATAAAAATAGTTCACCCTGGATTTGTGAATTAGTCTCGGACGACCGG AATACAAAAGACGAATATGTGGATGCACCCGGGGTCGATCATTATGATAC TGGTTGGACCTCAATAAGGTTATTTCTTTTTTCGATTGCTTTTGGTAATT AATTCGactaaatttctcaatttttttacatttatcAGGGAACGTTTTGA GAGTTGCTTATTGACTGATTCGAAATTGTTAACTCGTCAAACAAGTCTTC CAAAGTTCTTTCAAACTAATTTCCATTGTACTTGTACCAAACgtacttta aattttcaagattAACACAATCTTCACTGTACTatgaaatttgttttctt tttaatttccagCATCATTACCAATTATGATAACAACATGTGTCTTGTAT CGAAGTACTATCGTTGTAATTTACCAACCGACTCGGTTTGGGAACACATT GTCGTGGAAACTGACATGACTGTTTGCAATGAAAACCCTGCAGCGTTATT CCATTTCGATAGAGACACTGGTCGTCTGGTACACCATTGCTCTGGATATC AAGTTTGCCCTCTCCATCCTTTTGGTTCAACTTCTTGGGTTGGAATCGTT AAAACCGGTTGCAATTGGTACCAGGATATCAATGATTATTTTCATACATG GCGTCGTAATTTTCGtgagttattttttcattttttcgtcATTGAAGCGC TGTCAATCTAAATAATAATAAGCATATGCCCTTACCATGGGCCCGATTCG AAAGCGACCCAAAAATAAGCCTGAGATAtcgacacaatgtgcaaaatacg aaagcatccaccgaaggggggcttcaaaatatctgctgaaaaaaatcaaa aggagtgcgtcaaaactataaagatacatccgctttttactgtcagactt gcaATTCAGCAGTCCACAAAGAAATCCCTGCAGTgcatccagctaaaaga agTAGTAGTGCACTCTCTCTCAAAagcacacccttacagtgcatttcgtt GGTCtcgaaaaacatacccttaagggtggcacatgtcgtaggtcggacca tatgagtgccccccttTGAGGGGGGCTTGTATGTTCGaggagggggcgtt taaaagaagtaaTTATTACTTCGAATTAATAATGCAGTATTTCATTTGTT TAATAGTTGGCTACTTGTATAGTAACAACCTTTGCCcacattttcaattt tgggaTTGGGCTCAAGGAAAACCGCTAATGCTTTATCATTGCGAGCACTG GGAGCCAAGACGTGTAATGAAATTCCCTTCAATTCGTAAGTAAAACATTC ATGCCCTtctttttgagttcaaaatatttcacaGCTAATCCTTGTATCTC TATAACTTTCAATTATCAGTTTGGGAAACTGCGTTGAATCACAGCTTTTC CGCTGTAAAACTTCTGACTCTGAAAACTGAATAGTTCCAAGTTTAAATCC CGAACGACTGTTTCcgaagcaaaaaaagtgaagctgtAAGGTTTGAGTCC ATTTTGAATGATAGATTGAATCcagcactttctttgtttccatgcagcac atttttcaaagtcTGGCGATATATTTCAGTTTCAATCCGCCCGCGAGGGT TGCGCGTTTTGGAAggtaaataagtggcttcatttccccaTTCAAGAGAT TCCATTTTAGCACTTAGGGCTTTAAATTTAATACTTGGAACTATGCAGTT CACCGATTTATAGTACGTTTAATTTCATTTGGATGATTATAACATCTTTT TAGTACAAACCCgttctttttatataaaaaacactaaaaataaaGTGCGG TGTCACATGCAAATAACCCAGATGCACACCCCAACAAAGATGAAACCCGT TAAACCAATCCActgattttgttttaattttcagcaCACGGACCAGTATA TGTTCAAGTTGTGATGGGACTTTCGTACAGCAAAAACTGGGATGAATACA TTAACCATCCAAAGTAAACAAATATACTTTTAACATATTTTAAATCTTGT AGAGTATTTAACAAATGGGGGTTGGGGCGTTTATAAGGTACCTGGAGAAG AATAAACATGTGGGAGCGATCTCAAGTATTTTGTTCAATTCTAAATCGAC TTAGGACAAATTTATTCATCATATGTTaaatagcgagcacctcactaaaa accgggatttttcatctcgtttcttagtgagttccactttgacgattttc gaaaaaaagaaacctttcaagtgctttgacgcaaattcgatttttccgct actgcaggagcttaaaagtgacgtcaaaaaatcgaatgtttagagcctga aagcccgggctcaaaacattcgaaaaagtggcaaagtggaatagacgtta attgtgTAAAAAAAAAGTGGGTGACGTCAAGTATAGGCtatatgttaaaa aaaatttgtctttttaaaTATGCAGGTTTACCGGTGCACAAGCACCAGAT TTTGTTGGCCACCAAGACGATTTCTTTACAGCAAGCGGATCCTGGACAGA AGGTTATGGAATGCGCTTTGAGGCTATTTTTGTTGCTCCATCAACTGGTG ATTACAAATTCCGTATTTATTGCGATGATATATGCATGTTCAATATGGGT ACATCTCCGCAAACAAAAACCACCATCATTGATTACAGAACGCCCGACAT GACGCCCAATTATTTGGCATTTACGTAAGTATGCTTTTc

Coding sequence (CDS) from alignment at sc0000295:68725..73613+

>TCONS_00018257 ID=TCONS_00018257|Name=TCONS_00018257|organism=Clytia hemisphaerica|type=CDS|length=6660bp|location=Sequence derived from alignment at sc0000295:68725..73613+ (Clytia hemisphaerica)
ATGAAGTTTAAATTGATGTATATCTCTTTTGCATTTATTCTGTTGGTTTT
CACCAAACAAATTTTTGCAAGCAACATTATTCGTCGCACATCGTCAAATG
AAGGTACATTTCAAATCCGACGTCGAGGAAAACGTATCGCAACAACACCT
TATAAAACATTCGAAGTACCCGAACTGTTCGATTGCGCCGACGCATGTGT
ATACGACACGCCCTGCAAATCTATCAATGTCAATAAAAATAGTTCACCCT
GGATTTGTGAATTAGTCTCGGACGACCGGAATACAAAAGACGAATATGTG
GATGCACCCGGGGTCGATCATTATGATACTGGTTGGACCTCAATAAGCAT
CATTACCAATTATGATAACAACATGTGTCTTGTATCGAAGTACTATCGTT
GTAATTTACCAACCGACTCGGTTTGGGAACACATTGTCGTGGAAACTGAC
ATGACTGTTTGCAATGAAAACCCTGCAGCGTTATTCCATTTCGATAGAGA
CACTGGTCGTCTGGTACACCATTGCTCTGGATATCAAGTTTGCCCTCTCC
ATCCTTTTGGTTCAACTTCTTGGGTTGGAATCGTTAAAACCGGTTGCAAT
TGGTACCAGGATATCAATGATTATTTTCATACATGGCGTCGTAATTTTCT
TGGCTACTTGTATAGTAACAACCTTTGCCcacattttcaattttgggaTT
GGGCTCAAGGAAAACCGCTAATGCTTTATCATTGCGAGCACTGGGAGCCA
AGACGTGTAATGAAATTCCCTTCAATTCcaCACGGACCAGTATATGTTCA
AGTTGTGATGGGACTTTCGTACAGCAAAAACTGGGATGAATACATTAACC
ATCCAAAGTTTACCGGTGCACAAGCACCAGATTTTGTTGGCCACCAAGAC
GATTTCTTTACAGCAAGCGGATCCTGGACAGAAGGTTATGGAATGCGCTT
TGAGGCTATTTTTGTTGCTCCATCAACTGGTGATTACAAATTCCGTATTT
ATTGCGATGATATATGCATGTTCAATATGGGTACATCTCCGCAAACAAAA
ACCACCATCATTGATTACAGAACGCCCGACATGACGCCCAATTATTTGGC
ATTTACGTAAATGAAGTTTAAATTGATGTATATCTCTTTTGCATTTATTC
TGTTGGTTTTCACCAAACAAATTTTTGCAAGCAACATTATTCGTCGCACA
TCGTCAAATGAAGGTACATTTCAAATCCGACGTCGAGGAAAACGTATCGC
AACAACACCTTATAAAACATTCGAAGTACCCGAACTGTTCGATTGCGCCG
ACGCATGTGTATACGACACGCCCTGCAAATCTATCAATGTCAATAAAAAT
AGTTCACCCTGGATTTGTGAATTAGTCTCGGACGACCGGAATACAAAAGA
CGAATATGTGGATGCACCCGGGGTCGATCATTATGATACTGGTTGGACCT
CAATAAGCATCATTACCAATTATGATAACAACATGTGTCTTGTATCGAAG
TACTATCGTTGTAATTTACCAACCGACTCGGTTTGGGAACACATTGTCGT
GGAAACTGACATGACTGTTTGCAATGAAAACCCTGCAGCGTTATTCCATT
TCGATAGAGACACTGGTCGTCTGGTACACCATTGCTCTGGATATCAAGTT
TGCCCTCTCCATCCTTTTGGTTCAACTTCTTGGGTTGGAATCGTTAAAAC
CGGTTGCAATTGGTACCAGGATATCAATGATTATTTTCATACATGGCGTC
GTAATTTTCTTGGCTACTTGTATAGTAACAACCTTTGCCcacattttcaa
ttttgggaTTGGGCTCAAGGAAAACCGCTAATGCTTTATCATTGCGAGCA
CTGGGAGCCAAGACGTGTAATGAAATTCCCTTCAATTCcaCACGGACCAG
TATATGTTCAAGTTGTGATGGGACTTTCGTACAGCAAAAACTGGGATGAA
TACATTAACCATCCAAAGTTTACCGGTGCACAAGCACCAGATTTTGTTGG
CCACCAAGACGATTTCTTTACAGCAAGCGGATCCTGGACAGAAGGTTATG
GAATGCGCTTTGAGGCTATTTTTGTTGCTCCATCAACTGGTGATTACAAA
TTCCGTATTTATTGCGATGATATATGCATGTTCAATATGGGTACATCTCC
GCAAACAAAAACCACCATCATTGATTACAGAACGCCCGACATGACGCCCA
ATTATTTGGCATTTACGTAAATGAAGTTTAAATTGATGTATATCTCTTTT
GCATTTATTCTGTTGGTTTTCACCAAACAAATTTTTGCAAGCAACATTAT
TCGTCGCACATCGTCAAATGAAGGTACATTTCAAATCCGACGTCGAGGAA
AACGTATCGCAACAACACCTTATAAAACATTCGAAGTACCCGAACTGTTC
GATTGCGCCGACGCATGTGTATACGACACGCCCTGCAAATCTATCAATGT
CAATAAAAATAGTTCACCCTGGATTTGTGAATTAGTCTCGGACGACCGGA
ATACAAAAGACGAATATGTGGATGCACCCGGGGTCGATCATTATGATACT
GGTTGGACCTCAATAAGCATCATTACCAATTATGATAACAACATGTGTCT
TGTATCGAAGTACTATCGTTGTAATTTACCAACCGACTCGGTTTGGGAAC
ACATTGTCGTGGAAACTGACATGACTGTTTGCAATGAAAACCCTGCAGCG
TTATTCCATTTCGATAGAGACACTGGTCGTCTGGTACACCATTGCTCTGG
ATATCAAGTTTGCCCTCTCCATCCTTTTGGTTCAACTTCTTGGGTTGGAA
TCGTTAAAACCGGTTGCAATTGGTACCAGGATATCAATGATTATTTTCAT
ACATGGCGTCGTAATTTTCTTGGCTACTTGTATAGTAACAACCTTTGCCc
acattttcaattttgggaTTGGGCTCAAGGAAAACCGCTAATGCTTTATC
ATTGCGAGCACTGGGAGCCAAGACGTGTAATGAAATTCCCTTCAATTCca
CACGGACCAGTATATGTTCAAGTTGTGATGGGACTTTCGTACAGCAAAAA
CTGGGATGAATACATTAACCATCCAAAGTTTACCGGTGCACAAGCACCAG
ATTTTGTTGGCCACCAAGACGATTTCTTTACAGCAAGCGGATCCTGGACA
GAAGGTTATGGAATGCGCTTTGAGGCTATTTTTGTTGCTCCATCAACTGG
TGATTACAAATTCCGTATTTATTGCGATGATATATGCATGTTCAATATGG
GTACATCTCCGCAAACAAAAACCACCATCATTGATTACAGAACGCCCGAC
ATGACGCCCAATTATTTGGCATTTACGTAAATGAAGTTTAAATTGATGTA
TATCTCTTTTGCATTTATTCTGTTGGTTTTCACCAAACAAATTTTTGCAA
GCAACATTATTCGTCGCACATCGTCAAATGAAGGTACATTTCAAATCCGA
CGTCGAGGAAAACGTATCGCAACAACACCTTATAAAACATTCGAAGTACC
CGAACTGTTCGATTGCGCCGACGCATGTGTATACGACACGCCCTGCAAAT
CTATCAATGTCAATAAAAATAGTTCACCCTGGATTTGTGAATTAGTCTCG
GACGACCGGAATACAAAAGACGAATATGTGGATGCACCCGGGGTCGATCA
TTATGATACTGGTTGGACCTCAATAAGCATCATTACCAATTATGATAACA
ACATGTGTCTTGTATCGAAGTACTATCGTTGTAATTTACCAACCGACTCG
GTTTGGGAACACATTGTCGTGGAAACTGACATGACTGTTTGCAATGAAAA
CCCTGCAGCGTTATTCCATTTCGATAGAGACACTGGTCGTCTGGTACACC
ATTGCTCTGGATATCAAGTTTGCCCTCTCCATCCTTTTGGTTCAACTTCT
TGGGTTGGAATCGTTAAAACCGGTTGCAATTGGTACCAGGATATCAATGA
TTATTTTCATACATGGCGTCGTAATTTTCTTGGCTACTTGTATAGTAACA
ACCTTTGCCcacattttcaattttgggaTTGGGCTCAAGGAAAACCGCTA
ATGCTTTATCATTGCGAGCACTGGGAGCCAAGACGTGTAATGAAATTCCC
TTCAATTCcaCACGGACCAGTATATGTTCAAGTTGTGATGGGACTTTCGT
ACAGCAAAAACTGGGATGAATACATTAACCATCCAAAGTTTACCGGTGCA
CAAGCACCAGATTTTGTTGGCCACCAAGACGATTTCTTTACAGCAAGCGG
ATCCTGGACAGAAGGTTATGGAATGCGCTTTGAGGCTATTTTTGTTGCTC
CATCAACTGGTGATTACAAATTCCGTATTTATTGCGATGATATATGCATG
TTCAATATGGGTACATCTCCGCAAACAAAAACCACCATCATTGATTACAG
AACGCCCGACATGACGCCCAATTATTTGGCATTTACGTAAATGAAGTTTA
AATTGATGTATATCTCTTTTGCATTTATTCTGTTGGTTTTCACCAAACAA
ATTTTTGCAAGCAACATTATTCGTCGCACATCGTCAAATGAAGGTACATT
TCAAATCCGACGTCGAGGAAAACGTATCGCAACAACACCTTATAAAACAT
TCGAAGTACCCGAACTGTTCGATTGCGCCGACGCATGTGTATACGACACG
CCCTGCAAATCTATCAATGTCAATAAAAATAGTTCACCCTGGATTTGTGA
ATTAGTCTCGGACGACCGGAATACAAAAGACGAATATGTGGATGCACCCG
GGGTCGATCATTATGATACTGGTTGGACCTCAATAAGCATCATTACCAAT
TATGATAACAACATGTGTCTTGTATCGAAGTACTATCGTTGTAATTTACC
AACCGACTCGGTTTGGGAACACATTGTCGTGGAAACTGACATGACTGTTT
GCAATGAAAACCCTGCAGCGTTATTCCATTTCGATAGAGACACTGGTCGT
CTGGTACACCATTGCTCTGGATATCAAGTTTGCCCTCTCCATCCTTTTGG
TTCAACTTCTTGGGTTGGAATCGTTAAAACCGGTTGCAATTGGTACCAGG
ATATCAATGATTATTTTCATACATGGCGTCGTAATTTTCTTGGCTACTTG
TATAGTAACAACCTTTGCCcacattttcaattttgggaTTGGGCTCAAGG
AAAACCGCTAATGCTTTATCATTGCGAGCACTGGGAGCCAAGACGTGTAA
TGAAATTCCCTTCAATTCcaCACGGACCAGTATATGTTCAAGTTGTGATG
GGACTTTCGTACAGCAAAAACTGGGATGAATACATTAACCATCCAAAGTT
TACCGGTGCACAAGCACCAGATTTTGTTGGCCACCAAGACGATTTCTTTA
CAGCAAGCGGATCCTGGACAGAAGGTTATGGAATGCGCTTTGAGGCTATT
TTTGTTGCTCCATCAACTGGTGATTACAAATTCCGTATTTATTGCGATGA
TATATGCATGTTCAATATGGGTACATCTCCGCAAACAAAAACCACCATCA
TTGATTACAGAACGCCCGACATGACGCCCAATTATTTGGCATTTACGTAA
ATGAAGTTTAAATTGATGTATATCTCTTTTGCATTTATTCTGTTGGTTTT
CACCAAACAAATTTTTGCAAGCAACATTATTCGTCGCACATCGTCAAATG
AAGGTACATTTCAAATCCGACGTCGAGGAAAACGTATCGCAACAACACCT
TATAAAACATTCGAAGTACCCGAACTGTTCGATTGCGCCGACGCATGTGT
ATACGACACGCCCTGCAAATCTATCAATGTCAATAAAAATAGTTCACCCT
GGATTTGTGAATTAGTCTCGGACGACCGGAATACAAAAGACGAATATGTG
GATGCACCCGGGGTCGATCATTATGATACTGGTTGGACCTCAATAAGCAT
CATTACCAATTATGATAACAACATGTGTCTTGTATCGAAGTACTATCGTT
GTAATTTACCAACCGACTCGGTTTGGGAACACATTGTCGTGGAAACTGAC
ATGACTGTTTGCAATGAAAACCCTGCAGCGTTATTCCATTTCGATAGAGA
CACTGGTCGTCTGGTACACCATTGCTCTGGATATCAAGTTTGCCCTCTCC
ATCCTTTTGGTTCAACTTCTTGGGTTGGAATCGTTAAAACCGGTTGCAAT
TGGTACCAGGATATCAATGATTATTTTCATACATGGCGTCGTAATTTTCT
TGGCTACTTGTATAGTAACAACCTTTGCCcacattttcaattttgggaTT
GGGCTCAAGGAAAACCGCTAATGCTTTATCATTGCGAGCACTGGGAGCCA
AGACGTGTAATGAAATTCCCTTCAATTCcaCACGGACCAGTATATGTTCA
AGTTGTGATGGGACTTTCGTACAGCAAAAACTGGGATGAATACATTAACC
ATCCAAAGTTTACCGGTGCACAAGCACCAGATTTTGTTGGCCACCAAGAC
GATTTCTTTACAGCAAGCGGATCCTGGACAGAAGGTTATGGAATGCGCTT
TGAGGCTATTTTTGTTGCTCCATCAACTGGTGATTACAAATTCCGTATTT
ATTGCGATGATATATGCATGTTCAATATGGGTACATCTCCGCAAACAAAA
ACCACCATCATTGATTACAGAACGCCCGACATGACGCCCAATTATTTGGC
ATTTACGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010260XLOC_010260Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018257-proteinTCONS_00018257-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018257-exon-sc0000295-1491911889:68725..68882TCONS_00018257-exon-sc0000295-1491911889:68725..68882Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1510915933:68725..68882TCONS_00018257-exon-sc0000295-1510915933:68725..68882Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1575043694:68725..68882TCONS_00018257-exon-sc0000295-1575043694:68725..68882Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1491911889:70799..71042TCONS_00018257-exon-sc0000295-1491911889:70799..71042Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1510915933:70799..71042TCONS_00018257-exon-sc0000295-1510915933:70799..71042Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1575043694:70799..71042TCONS_00018257-exon-sc0000295-1575043694:70799..71042Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1491911889:71287..71588TCONS_00018257-exon-sc0000295-1491911889:71287..71588Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1510915933:71287..71588TCONS_00018257-exon-sc0000295-1510915933:71287..71588Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1575043694:71287..71588TCONS_00018257-exon-sc0000295-1575043694:71287..71588Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1491911889:72081..72209TCONS_00018257-exon-sc0000295-1491911889:72081..72209Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1510915933:72081..72209TCONS_00018257-exon-sc0000295-1510915933:72081..72209Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1575043694:72081..72209TCONS_00018257-exon-sc0000295-1575043694:72081..72209Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1491911889:72809..72887TCONS_00018257-exon-sc0000295-1491911889:72809..72887Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1510915933:72809..72887TCONS_00018257-exon-sc0000295-1510915933:72809..72887Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1575043694:72809..72887TCONS_00018257-exon-sc0000295-1575043694:72809..72887Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1491911889:73350..73613TCONS_00018257-exon-sc0000295-1491911889:73350..73613Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1510915933:73350..73613TCONS_00018257-exon-sc0000295-1510915933:73350..73613Clytia hemisphaericaexon
TCONS_00018257-exon-sc0000295-1575043694:73350..73613TCONS_00018257-exon-sc0000295-1575043694:73350..73613Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000295supercontigsc0000295:68725..73613 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.623704 0.321993 0.373865 0.162564 0.0989529 0.0781939 0.188675 0.176635 1.05117 0.65102 0.631896 1.22172 10.5165 11.6057 3.02077 2.54869 1.01905 0.592821 14.5082 19.0589 1.31248 1.40148 0.967524 1.91222 3.97847 4.57019 0.855222 0.429513 0.0814427 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018257 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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