TCONS_00018290 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018290
Unique NameTCONS_00018290
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1601

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018290 ID=TCONS_00018290|Name=TCONS_00018290|organism=Clytia hemisphaerica|type=transcript|length=1601bp
ACGACAAAAGAAGGGTTATGTTGTGGTTATTTTAGGTAAATAAAATGGAG
CAGTTATTGAATAACAAAAGTATGAGGGAACTAACACCAGAAGAGAAGTG
GAGGCAGGACCATGAAAAGCTACACGCTAAGCACAGAGGTCACGAAGCAA
TGCATTTGGAAATGGTGCTCATTCTTTTTGCCACTTTATTTGTGATGCAA
ATAGTGCTGTTTAAATGGCAACAAATGCACAGCAGATCGTACAAGatGGT
GACGTTGATAGGGATGTGGGTCTTCCCTTTCATCTTCACAGTAAGGCATG
GATGGTATCGGATGATATCTGTATGGTCGATCTTCACAATCATCACACTC
TTTGTCATATGGAAAGCCACCAGGTTTCCTGTAAACCCAACAACCCCAAG
GCTCGTATACAAATGGTTTTACAACGTGCATCGTGTAACATATGCTTTAG
GAATCATCGGTTACCTAATTATCATGATGACTTTCATGGGGTTCAACGTG
TTGCTGCTCATCAAGCCTGAATTCTCAATGCAAGCTGGTGTCATTATCAT
ATTTTATGGACTTTATTATGGTGTGCTAGGTAGAGATTGTGCTGAGTTGT
GTGCAGATAAAATGGCTGCTAAAATGGGGTACTACAGTGAGACTGGTCTA
CCTTCCAAGCGTCTGATGCCAAACATCTGTGCAGTGTGTGGTCAGGAGTT
GACGCTGACAGCTATGGAAGATATGGAAGAGGATGATACTGAGAAAAGTT
ATAAATTATCTTGTGGTCATTTattCCACGAGTTTTGTATACGTGGTTGG
TGCATCGTCGGGAAGAAACAGACCTGTCCGTATTGTAAAGAAAAAGTCGA
TCTTAAAAGAATGTTCAAGAATCCATGGGAACGACCTCACATTTTATTTG
GACAACTGTTGGATTGGTTGCGTTATTTCATCGTATGGCTTCCAGTCATC
ATTCTCGTAACACGTGGTATTAATTACGAACTGGGGCTAGAATGAAATTG
TACGGTCAAacccaaatttcaaaaaggctCAAAAATTCGATTTAGTCTCC
CAACGGATGAGATTTGTTCTTAACTGGAACGTTATAATACTGAAATCAAA
CAAATTTCTGACAATGAATTGGTAGAAAAAACTTTTCCGTTTGTTGCACG
CACAAGTTCATCATTGCCAACAAAGTAATGTCTGTCATACAATAAAAGAT
GTACCAATATGGTGAATTAGGGTTACAAGATTTTATACACAGAAAGATGA
CATGGAACAAAACAATTTTACTTCACATCCTAGCAATAGGGATCTTGTCG
CTacaatttttacctttttaacaTCCATGTTTCATTATCCCTAGAAAAAC
GATAGGGCGACACTTCTGTAGACTGAATTTCTGGTATTGCATCTGAGATT
TGGAGGTTTATTGtatattttgaaagtttatttttaatGTTCAATCTCTG
AAGGGGCTTCACAGGGTCAAACTACTCAGCAAACATTGaggtttttcaaa
ttcagtggaTTTGATCGAAACGGATGAAACGTGGGTGTTCTTATTTTAGA
TAGGGTCTAAATTAGGAATTGAATAATTagttattttgaataattttcga
A
Run BLAST on NCBI

transcript from alignment at sc0000295:133928..141873-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018290 ID=TCONS_00018290|Name=TCONS_00018290|organism=Clytia hemisphaerica|type=transcript|length=7946bp|location=Sequence derived from alignment at sc0000295:133928..141873- (Clytia hemisphaerica)
ACGACAAAAGAAGGGTTATGTTGTGGTTATTTTAGGTTTTGGAAATCAAA
CTGTTACCATTTACTAGGGTTGTTTAAAAGTATTCTTTTTTTGATCTGAT
TATTAATATTCAATGGTCTGCTGATAGACCCATGTAGCTCTATTATCAAG
ATCTCCCCTTCTTAGGTAAATAAAATGGAGCAGTTATTGAATAACAAAAG
TATGAGGGAACTAACACCAGAAGAGAAGTGGAGGTAAAAGTAGTGTGATC
AAATTCATCAAATTCATCATTGATTTCTGCCCGACTCATAGTTTGAAAAT
CCATTTTTCTGACGTTATTTTCGCAGAAATGGGTGTTACCGACTCATTTT
ATTTTTGCCTAAAAACGATGCAAACACAAGTTATTTGTGATTGTAGCCTT
ATTAAAACTGCTAAACTAACTTAATGTGTTACACCAATCTCAGTAGTGTA
ATCAAACGCTCAGTAGGTATCCTTTTATCATTGTTTTAACCACAGCACAA
AGCAATATGTCCCAAACACTTGAGTTCTAGAGTCCATTTGCTTCAAGTTT
GAACTCTTTTTTTATACTTTATGGAAACTATGTCAGTGTAATTAGACTAA
CGCCCTTGAGCATGGTAATGAACTTTTGTAATGAAGCTTTTGTAGGTCTT
AGCTTTTCAACCTAACAACATTGGTATCAATTCGAAAGCGATTCTTTATA
GACCCAAATTTTATTCTTATATTTTATATCTTGTTTTTAATATTTATATA
TCTTAAATCATGACATTACGTGTAATTTCATGTGATATTCAAGTCTTTTA
AAAAACATTGTCTCCTTTGTTTTACAGGCAGGACCATGAAAAGCTACACG
CTAAGCACAGAGGTCACGAAGCAATGCATTTGGAAATGGTGCTCATTCTT
TTTGCCACTTTATTTGTGATGCAAATAGTGCTGTTTAAATGGCAACAAAT
GCACAGCAGATCGTACAAGGTATTTCTTTGTAAATCTTTTTTTATAAAAG
TACAGAATTTGGTAAAAGCAAAAGCTATGTGGAGGGACTGAAGGAGAATT
TAAAAATTGCATTCCATAGCAATAGAGAAAAAAGCCAACTGCATTTGCCA
GCGCTGTGTTTTGAGGTTGTAAAGATGAATCAAAGTACCTTTCTTTCAAC
TACCATGCCTGTCATGGTGACAGTGATCTTACTACTTCAGTGACGTGCTC
CTTTCCTATTTAAATTGATTGCTTCAATAGCAAAAAATATAAAATTGTTA
AATTTTTTATGGAGTATGGGTTTAATTTTATCTTCAGTTCTTAAAATAGT
ATCCATACCATCAAAAAACAGATATGATCCTTTCTTAGCCCCTTAAGAAT
ATGGGTGACGTGGGAAGAATGAAAACACTTGCATAAAATCGTAAAAGCAT
GATTGACGGGTCTTTCTTGCCTTTGATTGGCCAATACTTGTAAACATGCA
AATTCAAATCATTAAGATGGGGTATGATTTGTGAAATGTGGGGAAAGTTT
TAAAGAATTTGTTCAGACTGAATGATTACAGATTTCTTTTTTTTTGCAGA
TGGTGACGTTGATAGGGATGTGGGTCTTCCCTTTCATCTTCACAGTAAGG
CATGGATGGTATCGGATGATATCTGTATGGTCGATCTTCACAATCATCAC
ACTCTTTGTCATATGGAAAGCCACCAGGTTTCCTGTAAACCCAACAACCC
CAAGGTACGTAATTCAGTTATTCTGAAAGATTTGGTTTTTGTACCCAAAA
TTTCACAAAAGTTTTTTATATTTGTCTTCTATCTTCTCGTTAACTCGGCT
GGATATAATACAATGATCAAAAGATTGCTTGAATTAAAGTTCCTACCAGA
TTGTTTAAGGGAGGAATTTGCAAAGAACGAAATTCAAAAATAATACAATT
TACTAAATGTAAGGGTTATTTTGATGCTAAACTACTGGTCAATTGACATA
GTGTGCAACCCCCCAGAATAGTGGGGGGGGGGTTTGCTGTTTTGGGTCAG
AAATTTCTAGATTTTTTTACTGTTCTAGGCTTTTCTCTTTTTTATTATTA
TACTGTAATTTCTTCAGGGGGAGGGATCTAAAATCTCGGTCATATAATAT
GAATCATACTAAAGTATTTTGGAGAATGTCTTGTATACCACCACCTTAAT
TTTGACAAGTGGTATTTTAGTACCCTTGCCAGTCCTTGAATTAAATATTT
TAAAGACATTAGGACACAAAGACCACCCAATTTTGGTATTTTCGAGACAG
ATTTTGTCTTCTCAGAACCATTTTCCTCGCGAGTGCTGATTTTATGCAAG
ATGATATCTATTTTCCTCAAAAATCTATTAAACAATGCTGCTTCTGAATT
GAGCAAACATTAAAGATATTTGATTGAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCAATAATTTTTGTTTACCTTCTTCGTATTAGTATAATTTTTCA
TGGGGATAGTAGTTTTAGCTGGGATCTGGGAGTCTGGATTGGAGGTGGGA
AATTTAGGGTTAGGTGGGACCTGGAACCCCCATTGCACACTATGATTGAA
TTAAATTTAAACATTAAGTTCTTTGCCATTACTGGTTAGAAATAACGAAA
CTGGTGCTTATCTGTCCTTTTCAGGCTCGTATACAAATGGTTTTACAACG
TGCATCGTGTAACATATGCTTTAGGAATCATCGGTTACCTAATTATCATG
ATGACTTTCATGGGGTTCAACGTGTTGCTGCTCATCAAGCCTGAATTCTC
AATGCAAGCTGGTGTCATTATCATATTTTATGGACTTTATTATGGTGTGC
TAGGTAGAGATTGTGCTGAGTTGTGTGCAGATAAAATGGCTGCTAAAATG
GGGGTAAGAGAATAATTTAGCTTTTGTATCCAGGGAGACTTATAAAAATA
CTTTTTATCATTCCCTTTCTTTATTAGAGACCCATTGACCTGTACCAACC
AATGTTTTGATTTAATATGAAACCCTCTTTAATAAATAAACTCATTGTTC
TTATGCAATGGTTTATGCTTTTGAAGAACGAAGAGTGTATTAAAAAGTTT
ACTCGAGAAAATTCACATAAACTCCTAAGTGTACAGAGAGACGAACATGA
TCTTTTTTTTACTTCTCACAAATTTAGTACTACAGTGAGACTGGTCTACC
TTCCAAGCGTCTGATGCCAAACATCTGTGCAGTGTGTGGTCAGGAGTTGA
CGCTGACAGCTATGGAAGATATGGAAGAGGATGATACTGAGAAAAGTTAT
AAATTATCTTGTGGTCATTTGTATCCTTTTCTCTCATTGGTTGATTTTGC
AATACACGTTTCTTATGATGACACCTCCATCACAAACATATTTTTTGAGG
ACTATAATCAAATTAGCCTCCCTCATGACCATCTTACCACCTTTTTATTT
TGGCTAATAATTCGCTAAATGAGAGGAGGTAGGTGGGTGATTGCATGCAC
CCTAAAAATGAAAGCTGACAAAAAGGTCGAAGATTTGTCTCCTGTTTTTG
TGGGATTTGGTATTTCTGATTTTGGCCTCTTGACCTGAATAAGCTTATGA
GAAGTTTCAAGAACTGAACATCCTCTAACTAAAAGACACTCGCAGAGACC
TACACTCTTTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTTCTATAAA
TTAACCCATGTCCGTTCGTCCGTCCGTCCGTTCGTCCGTCCGTCTGTTAC
CAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATCCTGTCATTACTTTT
TTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCT
GAAGTGGTTTTTCCTGGAAAATTCTTATTCCCCTTAAAAAACGGATTTTC
GTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTCTC
AAAGTTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAATG
GCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAATTTATTTG
GGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCTTAAAA
AACGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATA
TAGCTTTTATCAATGTTGACTCGTTATTTTTTTCTAATTTGTTGCACAAT
GATGCAAAATGGCAATGCCTAATATGTGTCGGAGCCCGATTTTCGAAAAA
AAATATATTTGGGCAAATTTGGGCCAAAAACTGCCTAAAAATAGGGTTTT
TTGGACTTGGTGCAAAATCCTGTCGTTACTTTTTTCTGATTTTTTGTACA
AAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCTGG
AAAATTCTTATTCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTTTAAGGAAAATTTTTTGGGCAAATTTGGGCCAAAAACAGCT
TAAAAGGTTTTTTGGGCCTGAATGGTTTAAGTGATTTTCGTATTTGGGGA
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCTAATTCTTTCTAGATCAGGAGATATAAGCCCTTAAAGT
TTGAACTAGCGATTTTTAAAAAAAAACTTAGAAAAAAAGACCCTGGCACT
CAAAGGGTTAATCCAGTCAAATTCATGGTTCTTATGTACCCTATATGGTT
TTTCCAAATTTTGTTTTACCGAAAACAGTAATATCTCTTCTCATCAGTGA
ATGTAATTTATGATAATACTAGCTGTTCCGGTGTCGTCGGAGACGACTTT
GCTGCAATTTTTTTTCTCGCTAACTTTAAATGTGCCATCCAGCTCTCGGT
AATTTGAAAAACTTTGGTGTTAAGATAATGGACATGGAATGAGATTCTTC
AGGCAATGGCGGAAAATACATGTGGGTCATCCATTTAGTACGTACGCAAA
AAATGTCCAAATATTTGACACCACCTTCCCTGCGTACGTACTACATGGAT
TTTTTCTGTGGTTCATTGTCAACACCGATATCTTTTTCCTTGACAGAAAA
TTTATTTTAGATTCCACGAGTTTTGTATACGTGGTTGGTGCATCGTCGGG
AAGAAACAGACCTGTCCGTATTGTAAAGAAAAAGTCGATCTTAAAAGAAT
GTTCAAGAATCCGTATCCTTTTCATCGTAGATATTGCTGAAAATTGGTCG
GTTTTTTTATAGGCTTTTGATCTTTGGTATGAAGTAAATAGTTTTGATTT
GTTCAGATTATCACGTCAAGACCCTTACCATCAATCATAAACCCTTATAC
TTCTTCAAACAGATCACAGTTGATTATACTTTATTGTTTTGAATTGGTGT
CAAATGCTTAAGATTCTCTCACATAATGGAATGCAGAGCTCCCTGTGTTA
CTTTTTTGTTATTACAAATGACTTTAAAATGGCTATGCTTTTTATGGGTA
GTTTTATTGGACTTGTAGCCTGATTTGGTTTTGTTGAAAATTTCAAGGTT
CAGTTTATTAGTGCTTAAAGGTTATTTTATTATGCTATTAATCAAAATAG
ATCAATTAGTTTACCAAAAAGAAGTTAGTCTTCCCTTCTAGCGAAAACTA
TTGGTAGTATAAGTCTGCGAATCAAAGCGAGAAGTTTAATAAGTTATGTT
CTCAACGTGTCTGATGCTATCTATCTATCATCTTTCTTTGACCACCTTCA
TCGCGTAAACAATGTTTAGATGGGAACGACCTCACATTTTATTTGGACAA
CTGTTGGATTGGTTGCGTTATTTCATCGTATGGCTTCCAGTCATCATTCT
CGTAACACGTGGTATTAATTACGAACTGGGGCTAGAATGAAATTGTACGG
TCAAACCCAAATTTCAAAAAGGCTCAAAAATTCGATTTAGTCTCCCAACG
GATGAGATTTGTTCTTAACTGGAACGTTATAATACTGAAATCAAACAAAT
TTCTGACAATGAATTGGTAGAAAAAACTTTTCCGTTTGTTGCACGCACAA
GTTCATCATTGCCAACAAAGTAATGTCTGTCATACAATAAAAGATGTACC
AATATGGTGAATTAGGGTTACAAGATTTTATACACAGAAAGATGACATGG
AACAAAACAATTTTACTTCACATCCTAGCAATAGGGATCTTGTCGCTACA
ATTTTTACCTTTTTAACATCCATGTTTCATTATCCCTAGAAAAACGATAG
GGCGACACTTCTGTAGACTGAATTTCTGGTATTGCATCTGAGATTTGGAG
GTTTATTGTATATTTTGAAAGTTTATTTTTAATGTTCAATCTCTGAAGGG
GCTTCACAGGGTCAAACTACTCAGCAAACATTGAGGTTTTTCAAATTCAG
TGGATTTGATCGAAACGGATGAAACGTGGGTGTTCTTATTTTAGATAGGG
TCTAAATTAGGAATTGAATAATTAGTTATTTTGAATAATTTTCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010269XLOC_010269Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018290-exon-sc0000295-1575043694:141839..141873TCONS_00018290-exon-sc0000295-1575043694:141839..141873Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1575043694:141641..141708TCONS_00018290-exon-sc0000295-1575043694:141641..141708Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1575043694:140905..141046TCONS_00018290-exon-sc0000295-1575043694:140905..141046Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1575043694:140170..140324TCONS_00018290-exon-sc0000295-1575043694:140170..140324Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1575043694:138321..138549TCONS_00018290-exon-sc0000295-1575043694:138321..138549Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1575043694:137904..138046TCONS_00018290-exon-sc0000295-1575043694:137904..138046Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1575043694:135212..135313TCONS_00018290-exon-sc0000295-1575043694:135212..135313Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1575043694:133928..134654TCONS_00018290-exon-sc0000295-1575043694:133928..134654Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1510915933:141839..141873TCONS_00018290-exon-sc0000295-1510915933:141839..141873Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1510915933:141641..141708TCONS_00018290-exon-sc0000295-1510915933:141641..141708Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1510915933:140905..141046TCONS_00018290-exon-sc0000295-1510915933:140905..141046Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1510915933:140170..140324TCONS_00018290-exon-sc0000295-1510915933:140170..140324Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1510915933:138321..138549TCONS_00018290-exon-sc0000295-1510915933:138321..138549Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1510915933:137904..138046TCONS_00018290-exon-sc0000295-1510915933:137904..138046Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1510915933:135212..135313TCONS_00018290-exon-sc0000295-1510915933:135212..135313Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1510915933:133928..134654TCONS_00018290-exon-sc0000295-1510915933:133928..134654Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1491911889:141839..141873TCONS_00018290-exon-sc0000295-1491911889:141839..141873Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1491911889:141641..141708TCONS_00018290-exon-sc0000295-1491911889:141641..141708Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1491911889:140905..141046TCONS_00018290-exon-sc0000295-1491911889:140905..141046Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1491911889:140170..140324TCONS_00018290-exon-sc0000295-1491911889:140170..140324Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1491911889:138321..138549TCONS_00018290-exon-sc0000295-1491911889:138321..138549Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1491911889:137904..138046TCONS_00018290-exon-sc0000295-1491911889:137904..138046Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1491911889:135212..135313TCONS_00018290-exon-sc0000295-1491911889:135212..135313Clytia hemisphaericaexon
TCONS_00018290-exon-sc0000295-1491911889:133928..134654TCONS_00018290-exon-sc0000295-1491911889:133928..134654Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000295supercontigsc0000295:133928..141873 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.71869	0.830835	0.00550721	0.325689	0.217482	5.51193	0.176567	0.116887	6.33192	4.99909	7.6454	2.28065	4.18385	3.85668	1.22349	2.74116	1.82656	2.24397	1.02507	0.916179	1.86418	1.96232	3.70233	3.76395	0.0714151	2.52386	3.78519e-06	1.69288	1.86934	3.16166
Blast
[Close]
BLAST of TCONS_00018290 vs. Swiss-Prot (Human)
Match: RN121 (RING finger protein 121 OS=Homo sapiens GN=RNF121 PE=1 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.376e-141
Identity = 189/315 (60.00%), Postives = 244/315 (77.46%), Query Frame = 3 
Query:   48 EQLLNNKSMRELTPEEKWRQDHEKLHAKHRGHEAMHLEMVLILFATLFVMQIVLFKWQQMHSRSYKMVTLIGMWVFPFIFTVRHGWYRMISVWSIFTIITLFVIWKATRFPVNPTTPRLVYKWFYNVHRVTYALGIIGYLIIMMTFMGFNVLLLIKPEFSMQAGVIIIFYGLYYGVLGRDCAELCADKMAAKMGYYSETGLPSKRLMPNICAVCGQELTLTAXXXXXXXXTEKSYKLSCGHLFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMFKNPWERPHILFGQLLDWLRYFIVWLPVIILVTRGINYELGLE 992
            E+ L+   M +L+PEE+WR +H ++HAKHRGHEAMH EMVLIL ATL V Q++L +W+Q H RSY MVTL  MWV P  FTV+  W+R + +W +F+ +T FV ++ATR P+  TTPRLVYKWF  +++++YA GI+GY+ +M T  G N+L  IKPE +M  G+ ++FYGLYYGVL RD AE+CAD MA+ +G+YSE+G+P+K L  ++CAVCGQ++ +      EE   E +Y+LSC H+FHEFCIRGWCIVGKKQTCPYCKEKVDLKRMF NPWERPH+++GQLLDWLRY + W PVII V +GINY LGLE
Sbjct:   16 ERELDEVDMSDLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTLFQMWVVPLYFTVKLHWWRFLVIWILFSAVTAFVTFRATRKPLVQTTPRLVYKWFLLIYKISYATGIVGYMAVMFTLFGLNLLFKIKPEDAMDFGISLLFYGLYYGVLERDFAEMCADYMASTIGFYSESGMPTKHLSDSVCAVCGQQIFVDV---SEEGIIENTYRLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMFSNPWERPHVMYGQLLDWLRYLVAWQPVIIGVVQGINYILGLE 327
The following BLAST results are available for this feature:
BLAST of TCONS_00018290 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RN1211.376e-14160.00RING finger protein 121 OS=Homo sapiens GN=RNF121 ... [more]
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