TCONS_00018312 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018312
Unique NameTCONS_00018312
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length170

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018312 ID=TCONS_00018312|Name=TCONS_00018312|organism=Clytia hemisphaerica|type=transcript|length=170bp
GAAAACACGATGAGAAAACCAACGACGATAACACACTGTAAGTTCTAGCT
CAAATTGCGACAAAGAAAAAGGAGAGGACGAAAGAAGAACCTCGAGAAGA
ATATGTTGAAAAAATAAGTAGCAAACTTACGTATCTATAATTTTGATAGT
ACTGGCAACGAGTCTATCAC
Run BLAST on NCBI

transcript from alignment at sc0000295:33489..33658

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018312 ID=TCONS_00018312|Name=TCONS_00018312|organism=Clytia hemisphaerica|type=transcript|length=170bp|location=Sequence derived from alignment at sc0000295:33489..33658 (Clytia hemisphaerica)
GTGATAGACTCGTTGCCAGTACTATCAAAATTATAGATACGTAAGTTTGC
TACTTATTTTTTCAACATATTCTTCTCGAGGTTCTTCTTTCGTCCTCTCC
TTTTTCTTTGTCGCAATTTGAGCTAGAACTTACAGTGTGTTATCGTCGTT
GGTTTTCTCATCGTGTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010278XLOC_010278Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018312-exon-sc0000295-1491911889:33489..33658TCONS_00018312-exon-sc0000295-1491911889:33489..33658Clytia hemisphaericaexon
TCONS_00018312-exon-sc0000295-1510915933:33489..33658TCONS_00018312-exon-sc0000295-1510915933:33489..33658Clytia hemisphaericaexon
TCONS_00018312-exon-sc0000295-1575043694:33489..33658TCONS_00018312-exon-sc0000295-1575043694:33489..33658Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000295supercontigsc0000295:33489..33658 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018312 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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