TCONS_00018375 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018375
Unique NameTCONS_00018375
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1124

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018375 ID=TCONS_00018375|Name=TCONS_00018375|organism=Clytia hemisphaerica|type=transcript|length=1124bp
AACATAGTTATGGTATAGCTTCTCAACATTGAGCGTACATACGTACACAC
CACCCAAAAAATCTTGTGGGCCCAAAGCAAAAGAAGATAGACATGGATGG
ACAGGGTCACATGGATGCTGATTGATGGagaaagtaaaatttaattaaat
agACTACTATAAAAATGATGTCAATGGAGCAACAGAATACAGACCCCCTG
GGGTTGTTATCAGGAATCATGGAGGCAGAAGACCTCCCTACATGGTCCAA
AGTGCCGGTGGGAAAAGTCCTGGAACCAAAAGAAGACAAAGAAAGTCCTT
TTCCTGTGAACTTGGATATCAATGAGAAAGTCTGTTTATGGGAAGGAGAT
ATCACTAAATTGAAATGTGACGTGATCATCAACTCCACCAATGAAGCACT
GAATGATAAAAATCCTGTCAGTGAAAGAATACATAAAGTTGCAGGGCCTC
TTCTACGAGAAGAAGTTAGACAGGAGCTGCAATCATGTAGGACAGGGGAA
GCCAAAATGACGAAAGGATATGAGTTACCCGCAAGgTACGTCATACATAC
AGTTGGACCACGTTACaatacaaaatacaaaacaGCCGCTGAAAGTGCTC
TATTCATGTCATACAGAAACGTCCTTCAACTAGCTAGAGAGAACAATTTG
AGTTCAATAGGTCTTGGTGTCATCAACACAACGCGAAGAGGTTACCCACC
TGAAGAAGGAGCACACATTGCATTACGTACTGTTCGACGCTTCTTGGAGA
AGAATATAGACGCTTTCCAAGTGGTCGTTTTCGTTGTCGAACCTATAGAT
GAGAGCACATACAAACGACTGATGCCATTATATTTTCCAAGAGATGCACG
TGAAGAATGCTATGCTGCAGAATGTCTTCCCTCTGACGTCGGCAATGAAG
ACGGTGAACCATTTCTCCCAGAACGTCAAATCAGAATCATGGATAAACCG
CTTAAAACGATGAGTGGTATAGACTTGTTAAACTCGTTCGTTGGTCGACA
CCCTTTCTCCAAAGTTGCAGCAGATAACGATACCAAACGGAAAGCCAGGT
TGCAAGGTCGCTCACAAGAGGAAATGGAATTTTTAGAGCATCAACGGAAA
TACTCACAATGGGTCAAACGTTCA
Run BLAST on NCBI

transcript from alignment at sc0000297:202771..218042+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018375 ID=TCONS_00018375|Name=TCONS_00018375|organism=Clytia hemisphaerica|type=transcript|length=15272bp|location=Sequence derived from alignment at sc0000297:202771..218042+ (Clytia hemisphaerica)
AACATAGTTATGGTATAGCTTCTCAACATTGAGCGTACATACGTACACAC
CACCCAAAAAATCTTGTGGGCCCAAAGCAAAAGAAGATAGACATGGATGG
ACAGGGTCACATGGATGCTGATTGATGGGTAAGTTAGATTGAATctgtaa
tttcaattttattcaacatgaaaatttttatggctgagggaaagtaaatg
tcaatgtatgtggagtaatttgttattcaattttGTCACCtacaaaaaat
gtataacaaatgACGCTAGCTATATATCAGCAAATATTCTATCCCTGCCT
CTCACTTTTCTAATTGCCTCTTCatagcttttaagattgtttctAAGATC
ATTCTTATTGAATTTATGCAATCTATGTCTTTGTAGCTTATCTTTTTAAG
AAGTGTTTTTAATTTaagttcactttttttttcatgttatagcaggttaa
atctttttgatggaaatttcaaaaataaaatatcccaACGTGTAGAGTGA
AGCTTTGCGGTTTCGACAATATATAAAGTATTCTATAATTGTTAGTAGTC
ATTGAATTATCATACAAAGTAAAAtgtctgtttttattttgaaacgcGTT
CAATTTACTGACTTAATATTCATTTTACAGACTGGTGTTTCTAATCCGAA
GTTCATGCACTGTTGATCCCCTTAGACAGGTATgagccgggaagtatctt
atccatttggtggactaactttcttgggaTTTTTCTcgttccttatggta
ataagaatattttaagcttctgatGGTGGGCCACCTGGATTTTTCACCTG
AAactgggtatccataatggcggatttttgttCATTGGACCcccgtaggc
aaaactgaaaatttttccaacccaaatataggcttatcgtatatcaatcg
atcggaaatttgatactaattaattttgagatacaaagttCGGTCTGAAA
ACTTTTctatctcgagatataaattatttttgttttcttttctccggttt
ggctgcagttgtaggcgggTTTTCATGGAGTGAGGCAATTCTCAAGaagt
catatctcaagaaatatgcatTTTAACATACCAAATCTTTATGTGCTCAT
AGAAAAGGCATTAAACATTGTTTgcgcaaattttcaaaaagtttgcagta
aaaatgtgtattttacagaccagagtacaatttccttaccgtcaaaaaat
atctttttttctgaaaattggcCTTTTGTATGAAATGAATGAGTGAAATG
ATTCTTAATAAGGTTTAGAGCCACTCAATTTTTCGTATTATACTCAGAGG
GGGTACTTAGGGAAAATGTAAGGGATAAATGTGTCTGGTCAGCACTTTAT
GAGCATGATCTTTGGTAAAATTTGATTCCAAAAACGATGAAATTTCCAAG
TTATTGctcaaaaatttcttgaaatttgatACATTCTCCCATTGTATCTC
AACATTAAACAAAGTTGAACCTTCTattctttattttgacaaatGCAAAG
AATTAAGATTACATGTGAATCgttgtgtgtattttacaggccagaattaa
gtgcttctaggtcagtgtagctggaacctcgatattctaggattagaaaa
agctatacctgttatcttttttctttaaagaatcaacaagccatcaacat
cgataaattacacacatttcctcagaaacttttaaaattatctgccatta
tgactttcttgaagcgtttccgaaattaaccaatcgggttaggtatcgga
attcctatgggagttcatTTCCGAGATATATAAAATAGCTAAgttggcaa
aaaaacttttccctggggtttgaggaataaacagaactgttatcatttgt
tttttatgtaaccatatatttaaatttgcgctcaaaaatacttaaataaa
taagttaataacattcaatatactatttgtatctctcagaaaataaacat
ttacaGAACGACatagtttatcatttggaatacccccgtgtttggaccat
tctatcgtgggcgcaaaatagggcggaaactaagtagcaccctcagtgca
agattgccgcctcatctttattcgcccgcgcgaaaacgcgagctaatcat
tttttctcacacgctcaaggggaaaaggaaagtgatcgatattctttgaa
ggaaaaatgtcagaaacaaacccaaagaccaaaagatgtattttgttgtt
gagaatcgatcctgtgaagatgaaaaaatttctcctatgcgtttttttcg
gaacgctgaaaaactctaatctCCATCTTCCTtaaaggtaaagaggttgc
gggatttgggttagcgaggcaaaaatcgctaaaaaactggtaaaatcgta
atcctcaaaaatcgaagttccagcctcactgtagGTGGTTAGATCTTGCC
CTAAAACATTTAGCCTTACCACGGAGCACCCTTAGCTTGAGAATTTTTAT
CCGCTAGTTTAATCCGCTAAAATCCTCTAAttcctatatctttattatCT
CAGAATCTGTGTAACCTGTCTTGTCTTCGATTCTTAAAAATATGTGAACT
GTTTACAGTTTTTGGAGGATTCTTGTTTGAATTTAGCTTAGATAGTTATA
AGATTTTGTGAATGCCGAAAAAGTGACGTGTGTAAATCCGGCTTTAGCCA
ATAAGCCTATACTATTGTAATGAGATCTGCGAGTGGAGCTACATTTGAGA
AACCACTTGGAACTATACTGGTTACTGTTGCAATTAAGAGTACATGAGGG
CAGGGCCCAATGCATCGTTTTATATCAGTTTCATCAGTTACTTGCTATGG
GTGCTATGGGTAGTTTCTAACTACCAGTTGAACGGTACTCTTCAATTGAG
GGACAAATTTTGATcgattttaatttaatttcaaaatagtacgtctcttt
aaaaaattgaCAACATTACATATTGATTTACGCCTAACAGGCAACAGATA
CTTGATTCACACAGCAGTGTAGGATATTATACCTAATACATGTGCATGGG
ATGACAGCGAATGGCTTCTCTTTACACAAGATGTCCGATGAGATGACCTA
TCGAGTAGTCTGGTCCTTCTTCCCGCTTGGTGCTCCCCTCAGGATCCCAA
TGTTTCCAGAACTTGCGTAGCTACCATTAGGAAAGgcataaaattttgat
gaaaatagtCTGGTTTTCAGCGCCTAACCCACTAAGCCTGGATAGCCTTG
CATCCGTGAGACGTCAGACTTACTTtcctcaaaaagaaaaaagcttttcC
CCATTTAAAGGGCTAAGAGGGCGAAGAGCTCCCTCATTAGAGTCGTCAAC
GCGAAGGTTTTTTATTTCATGCAAGCTTGCTAGACACTAGCACGGATTTC
TCGCTCAATCACTGAACGGCCTGTAGAGTTTCTGTCCACCCAAGGGCGTC
TAGGCGAGGCGTACGTACTAAAAAGTAacatttacttttcattaagAGAA
ACACGGCACCGAGTTGGAGTTCAGTCCTGATCTCCTAGAAGGCGGTCAAT
ACTTGTACACTACTGTGCCTTCACATGGGATAAATCAtaactggacatct
atcttctATTGTGCCTGTGAAGTGAGCATCGTTGctgcctgtatttcaaa
attggtataaaaatcCAACAATATTCCCTCAGAATTCTTCTTCTTTGAAT
TACTTAgataaaatgattgatagagcttgaacattactcatAATTCACTA
AATAATTATTCTCAAACTTTTTcataagtttgcaatatattttatcaaca
tttttcaacgcagaaatgcagaatttcaactgcgtgtatactttaaTCAG
TCCAAtaaattttttatgacttgaaaaaaagtatGCCAAACTTGGAGGGC
ccgtgtcataagaatatcataatttgaatcccatactctctaaaattatt
ccatacttttgagtaaaaaatcagaaatattAGTCAGAGTTTTGACAAGT
GACGATCATACCGCCTCTGTTTTCTTTGTCATATAATAGATAAAAGACTT
TGGAAGAGTTGAACTACAGAGACTTTTGTTgtagttttgacgttgttagt
aaggtattcccaagaggtatatcatcaagatttattgtttcatttaatGT
TTTTAAGGAGGCgacaacgaagctagcagtggtcgtgttcacactgcaga
ccttccttaattaaaatgtagttaggagaatcctttgttgactacaatac
agaacgtgcatttaacaaaggGTCGAACGGTTAGTATTGTAACTTTTAAT
CAATCGTACTTAATTAAAagtcgtaagctctattgtcttaaaggtagggt
agaggcttccctttaaacaaaagattttattacggAAGATACATTAACAT
GAACAAAAGGAGCGTTTTGTGCAATAAAGTATATTTCAGCAaaacagaaa
agagaaaaaaagagagaaaaaatgtaaaaattgaaTCATATGAATCAGTG
TTGTTGATGGGTGAGGACGAACTGTGacaaaccagtgtattcatttATCA
TAAATCTGTTTCTTTGTTGTTAATGGATTTAATTAAGGAAGGTCTGCAGT
ATGAACACGACCAGtgctttctacaaaaatacaaagtcgatggatgtcca
gtcattTATATATTCATGTTCTAATGAAACCACAGAGATCAGATGATTCT
AAACCTTAAAACCTCATGAGAGGAAAGGAAAATGGAATATCCAGCAAAAA
TTTCCCAGAGgtagggtagggcgtcaacagccatttttggggcaaagtca
aaaaattcaagatgtagtgtttttttatgaaaatttaacctattgtgagg
cattctgcacaatttttaaggtcggaagtccaaaattggccgaacccccc
tgggggtactgattcgcactaccagcaaaaattggaaaaaatggcatttt
ctggacttttcaggcctgtaaatttgtcaaaactatTTCAAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaa
attgtgcccattggaaccctaaacgagccgttttaagccaattttgggta
gcaaaatgctttttaaggccaattttgcaagatcataaactttaaactga
ttgattcatatgtctgaaattttcagagatggaagtcttcaataaagtct
ttaagcaaaatgaacttcaagtttttcacttttttcaaaaattcataatg
gcgttttcaaaaattgctttttagcaaaaaaaaattttatttatcaaaaa
atagcattttttaaggcaagcttctacaaacagagtttaaatgctgactg
aaattttttttgcagtgatagtattctggagatactccaggaaaatcaaa
atcatttgggtctgggatgcgtctatgtccgcNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTgggattgaaattcctgctgaaacaggctaaaatgca
acatttcgagcaaaaacccaatttttgactaaaaacctCTCTAGAATGGC
AATAGTTTTggacctaaaatctttttgcagtgatggTATTCTGTAAATAC
TCCAGGGGTAACAACTATTTAGGTATAAGATGCTTCTGGGACcacaattt
tttaattgaagccagttttaaaatgtatataatatNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGACG
AAACAAGTCTTGAGAATGGAAATGTGTGTGGGCTGTAAAGAATTGAGTGG
AATGGGATATTTGTTATAATTTGTTTCAactagtatttctaaattaaaag
attataaattcatattctttgttttaaatgtAATATACAAAATTTTTAGC
CAATTATGATGTATCGGATGGAAATATGTAGCATTTTaacagagatttca
tttccataatggtggatgtagacaaatcccagactcaaatgattttgttt
tcccaTGAGAATTCACAGAATATTAacacttcaaagaaatttgggtccat
atctattgccattttatagcagtttttagtcaaaaatggggtttttgctt
gaaaggttgcattttaagccaattttagcacatatttcaattccataatg
gtggatatacccaaatcctaaacccaaaggattttgatttccctggagtt
tTTCCAGTaggctatcactgcaaaaatattttaagttcatgtttattgcc
attcttaagatttttacagtcaaaaatgggatttttgcttgaaatattgc
gttttagcagggatttcaattccaaaatgggggatatacccaaatgccaa
acccagatgactttgatttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNagcagggattttatttccaaaatggcggacatagacgcatcccag
acccaaatgattttgattttcctggagtatctccagaatactatcactgc
aaaaaaatgtcagtcagcatttaaactcagtttgtcaaagcttgccttaa
aaaatgctattttttgataaatataatttgtttttgctaaaaagcgattt
ttgaaaacgccataatgaatttttgaaaaaagtaaaaaacttgaaattca
ttttacttaaagactttattgaagacttccatctctgaaaatttcagaca
tgtgaattaatcagtttaaagtttatgtacttgcaaaattggccttaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNcttaaaacggctcgtttagggttccaatgggca
caattttcaacccaatatgattattttgttgtttcttcataaaatttagt
acaacaaatgaaaaaaataaggtttgaaatagttttgacaaatttacagg
cctgaaaaggccagaaaataccattttttccaatttttgctggtagtgcg
aatcagtacccccaggggggttcggccaattttggacttctgaccttaaa
aattgcacagaatgcctcacaataggttaaattttcataaaaaaacacta
catcttgaattttctgactttgacatttgacgccccaccctacCAGAGGG
GAATATTAGGTCACACGGGGGAGCCAGGGGGGCTAATAAATAGAtccttg
aaaagaaaaatgacaacttttggCTTAATTTTATGTTTACAAACCAATTG
CAGAAAAAttgaagtttgtttacatttcctATTGGAAACACAAGGTAGCG
AAAAGGCTTGGCTTTCCAACTTTACACAAGATTTAGGCCAGGAGCTCTGA
TCCAATCATCTGCATCATGATACTAGCACTGATaatagcttcaaaataaa
tgccTTATTAAGGAACTTTAAAATGTATAGAATGTTTTTTTACGTTCCTC
TGAGACTTAAAAAGGTGTTTTGAGTTAAAATGACTTAATGGAAAACTCAT
TATGTAGCACTAAGTTATCCTATGGAATTTCAAGTTTCAACCTGTTGTTA
TTTTGATGATCACTGGAAGCAAATTCAGAGATAATTGCACTAAATTTAAA
CATCAAATCAAGTGAAAACATGAGCTATTtgataaacctctttaaataat
TCCATTTCCtattgattttcttaaaaaaaacactgaaaactgGAGCATTT
CCACCTGTTCTTGCCTGTAATGTTTACATTCTACCCAACTTAGCCTTGCG
ATCAATATCTGGAACAGGGGGGGGTATTgagtcagtgtactggcccatag
ctggtggggtggtgtattttttagattaaattgagttagtacagtgtact
aaaaaggtggtcctctgagaaaaatacaatgaaaaagttagtacactgta
ctaaaaagggtggtgttcTGAATTGATACACACTGAGAAGTTAGTACATT
GTACTAATTTCAGTGGTAAAAAAACACAAACCCAGTGAATTCCCATGTAT
ATTTGGCCTAATTTGCCAGGTCCAAGCTGGTCAGAGACCTTCAAGTCAAG
GCTGGTTAAGCTATACAAATTCGTACACTGATTTTCTCCTAATGTTTCCT
GTTTacttgattggatttgtttcagAGTCGCAGCATGCACAAGTGGAGAC
CTGCCTTAATTCCAATCTTGTTTACGTTTTCTTTAAGGCCCTATCTACAT
TATGGCAATGGCAACAACAAGAATTTGAATGTGTAAACGTTCGAATCGAA
GCTTTCAAGTTTTATAGAAACAAATCCGCTCTATTGTTTTACGTTTCTTA
GTAACCTTGTTGGATTGatgttaattgaaaaaaaatctgtatataagtga
aatcaccggggggagggggtgaaaacgaccgtacgtttggccaaaaatca
ggtctctaaaatcagccccttacagtgcaggaaataTTTAACTGAAGATC
AACCCTTATAGtgtaatttctcaaattttacctcaaaatttggtatttta
taaaattttacacccttacagtgcacttttcccacttgctcacaaatcaa
cccttacagtgcactttccaaagtccaaaaaacctacccttaagggccgc
acgtccggtaggtcgtcaaattagaacagtgcactataaggggtggtttc
taaacttatctgagcaaaaaaaaaaacagctagtacagtgtactaaaagg
gtagTATCAAAAATCTGGTCATGGAGaagtcagtacagtgtactgaaagg
gtggTAATAAAAATCTATTTGTGGAAAAAcgtcagtacagtgtactaaaa
gggtggtatcaaagctccggctgtggaagaaagttagtacagtgtactaa
aagggtggtgtcaaagccccgaccgtgaaaaaaagttagtacagtgtact
aaaaggggggtgtcaaagccccgaccgtgaaaaaaaggtagtacagtgta
ctaaaagggtggagtcaaagccccgaccgtgaaaaaaagttagtacagtg
tactaaaagggtggtgtcaaagccccgaccgtgaaaaaaagttagtacag
tgtactaaaaaaggtggtggtctaattttttcgaaaaaaatccaaaaatc
aagttagtactctatggtccagtacactgacttggtacccccccccTGTC
TGGAAAGGTGTATTTCAGGCTCAAAAGGGGTTTTGAAACAACAAAGAGAG
TTCAAAGGTAAAATATCTTCTGAACGAGACCCTAATCACGCAAATGCTTA
CCCTTTTTTCTGCAAAGCATCAGCTATCAGATGATTTATGTCTTGTTAAA
ATATATTCAACCAAATGTATAACTCGTCAAATttgaaaggttgaattttt
tttaatgtatcAAAACTCATTATCAGGACAAACTTTATGAATTCAATGAA
GTTCACTGGTGATAAAAAATCACTGAAAGGAAAATAAACGACCTTTTGTA
AATGGGCCTCTGAGATCTTACTGTACCTTAATCTCTTCTAGGCTTttctt
ttttgtgttttaacAGGAATTTATGTAATCAGAACTACTACAAACACCTT
GCGCTGACAAAATTTTGCAGAGGTTGCAGCAAGATTTGCCTTCCAATTAG
GGTACCTTTTTAAGGGGataatttttgcaaattttttgcaaaatgaagtc
ctctccaaaattttaaaataggtcaattcacgaaaataaaaattatttaa
aatctcGTTTCACAAAGTTTCAGCTCTTTTAGTGTGTGCAGAATAATGGG
ATGAAATTAAAAAGCAGCTTCTCTGATTACTCAAATTATTCTgattgttt
ttaatgaaataacTTTTGTTTTACTTTAGCTTTGATTAGGTCGTTagaaa
aagatttagaaaagacagctcattaaaaaaattggcCAGTTTCTATATAT
TATCATCATAAAATTACACTCCTCCGATATGTGCCTCCTCTTTTATTTGA
AACATAAGCCCCCAATTCTTTTTAATTCAGCATAATTTTCAAACCcccat
tttaagactttaaattctttaaataaaattagaaaaattaaaaagtcaat
tttatttttattctttttcgcCACAAATACCCGGTAGTTGATCAGCATTG
TTGATCAAGGTTTTCCCTTACTTCAGGGTTTTATCCTCTCATTAAAAAGG
AGGTGTGAACTATGGCATTGTTATCTAACTTTATACAAGTCATTAGAATA
GTTGCTGTTGACATTTGCCTAGGCAACTTTTAAATGATTTATTATTATTG
ctgttattaattttgattAAGTAAATTGATGCTGATTTGCTAAAGTAGGG
CTTATTACTATGGGTGATTGTTATATTGTTTTCACTCTTCCTCTTATTAC
AGCAGAAAACATTATGTGCAAGCTGTTCTTGTTAAGTCTGACAGACCTTT
ATCTGAAAGGTAAACAAAAACTTTGTAAGACTTGAAATAAAGTTTTGATC
CTTCTTATTACATAGTGCTTTAACAAGACACCTTGTTTTTGTTATGAAAG
TTTTGTTGGATGGtcatgtttcaattttatttttgtggTTTTATGCAATA
CAAGTTATATTTTTAACGTTGAAGCTACACCTTACCAACAACCTTCTGTC
ATTATGGATGTGAGAGATGTTTTCTCGTTGTTTTGATTATACTTTAGTGT
TTACATTGAAGTGACAATCTTTTTACAACTCAATCCACTTGAAAACTTCT
ATCTTCTCTACACACATAAACATGATAACTTGAGAGCAAAGATTGTTTCT
TTTGTATTATCAGTTTGTAATatggaattatatttttttaggatttaaag
TGCTATTATTTTTAGCTGTGCTGCCGTTTTTGTGTTTTAACTTGTTGaca
ttttacctgtttttttttgcacaGAAACTGAGATATTATTGAGTAAAGTT
ATCAttcaatttcatgattttagagaaagtaaaatttaattaaatagACT
ACTATAAAAATGATGTCAATGGAGCAACAGAATACAGACCCCCTGGGGTT
GTTATCAGGAATCATGGAGGCAGAAGACCTCCCTACATGGTCCAAAGTGC
CGGTGGGAAAAGTCCTGGAACCAAAAGAAGACAAAGAAAGTCCTTTTCCT
GTGAACTTGGATATCAATGAGAAAGTCTGTTTATGGTATGTGTTCTTAGA
TACCCTATTTCCTTATATCTTTTCTATCCGTTTTCTGCATCTGCTCTTAA
ACTTCAGCTTCATACTTGGACTTGGATCTTCAACTCCTTCCATTGTGTCT
TGCTACCTTTATGATTAGCTTGTTTGCTGTTCCTGACAGAATAATTGATA
TCCATGAGcacaaattgaacaaaaatataaCTTCTTTACTGTCTCTTTTA
GGGAAGGAGATATCACTAAATTGAAATGTGACGTGATCATCAACTCCACC
AATGAAGCACTGAATGATAAAAATCCTGTCAGTGAAAGAATACATAAAGT
TGCAGGGCCTCTTCTACGAGAAGAAGTTAGACAGGAGCTGCAATGTGATT
AATTAGTCACTTTATCAATACAAATTGTACACATACAATCATTGCGCAAA
AACTAGCTATCAAACTACTTAAGTACCCTATATAACTAAAACCCAATGCG
TTTTTGTATTGCAGTTAGAGTTGATAGTTGTATAGAACCTACattcaact
ctctctaatttgaacCTCTGGTCTCCTCAACTAaaaagtgatttaaatta
ctctctgtaattcgaaagcCAACTGTTTacactttatttttcattgtaaC
CATGTAACGAGTGACAGTTAGTAAAAAATTTACTTCCATCCATCCAATTG
TATCTTATTATTTCATTTCCAGCATGTAGGACAGGGGAAGCCAAAATGAC
GAAAGGATATGAGTTACCCGCAAGGTATAATTTGTCAAAACTCTTTTCCC
TGCAACATAAGAAAGATATCAAATAGTATAAAATATATCCTATTTGTACA
TTATTTCCTTCACCGTACTTATGCTTTACTTTTGATGTAAAACGACCTTT
TCCTGGTCaaatcttaactttttcaggTACGTCATACATACAGTTGGACC
ACGTTACaatacaaaatacaaaacaGCCGCTGAAAGTGCTCTATTCATGT
CATACAGAAACGTCCTTCAACTAGCTAGGTCAGTTTTCatgaacaaaaca
ttttttcgctCAAACAAAAGATGGAACTTATTCATCAACGGTTGGGAATT
TCTTGTGAGAAAGGCTACCATGTgtatttcaatcaattttcctCGCATCT
AAACCAGCTTTTTGGCCGTCTTAGTCAGAGTTAAAAGCTTCtgcttcaaa
atttaaaagcttttgaatCCAATGATCTTTGCAACTTCCTGATGTACAGT
CGTTCATCTGAGATGGAAGTTCTAATCTTAacatatgttttgattttgtg
agATGAAAGAGATTTAATCGGGAACCTGTTTCTTCCTTTTCAGAGAGAAC
AATTTGAGTTCAATAGGTCTTGGTGTCATCAACACAACGCGAAGAGGTTA
CCCACCTGAAGAAGGAGCACACATTGCATTACGTATGTATTGAGTACATA
GATATGATATTCCTTTACACACTTCACTAGATAGGCTAACTGTCTACAGA
TTACACGTGGAAGTTTGTCCATTACGTATGTATCTAGTCTGTGTTTTTGT
TTAGAGATTAAGAATATGCCTGTGACTgacttgtctgtacacagacccag
tatctacagctaatttcaaaattcattgctgtagagggtctgttgtcatt
gtcttttctcatttgagatttttcaaaccgactgCTGCGAcagagtgttg
gtgagagatgGGAGAGGATGAGAGAAgttttgctatttataaatcatact
tcatctctgtacgggaatttttttatcaaacagacaatgcgcacagagtg
tactacgaagcgataaacgtgagatacactttGGCACAGAGTAGTGATTG
ACAAATGAATCTCAAAATGTTCGTTGATGTTTTTAAGAAATTCCTTTGTC
AAACATAAACGAGGAAAATAAATCTTGACAACATTTTCACTTCATTTCCA
GGTACTGTTCGACGCTTCTTGGAGAAGAATATAGACGCTTTCCAAGTGGT
CGTTTTCGTTGTCGAACCTATAGATGAGGTATGGTGCATAATTAACTGTG
TTCGtttttgcattgttttattgCCTCTGATTGTGCCACTAGTAAGAAAT
CACAACAGTTGGTACAGTTTCTCATTCCACTATTGGGTACACAAAAAGTT
TTCTGGATCTACTTCACCCTCATTCCATTGAATCAGATTGAACAACTTTT
TCTCTCTCTCATCATGCAGAGCACATACAAACGACTGATGCCATTATATT
TTCCAAGAGATGCACGTGAAGAATGCTATGCTGCAGAATGTCTTCCCTCT
GACGTCGGTGAGAAGATTGACGCTCTACCTCTTTCTCTCATTCACTaatg
aaactttcaaagaaaattaatcGATTTTTTGAATGTTCAGTTGTAGCTAG
CATGAACGGTGATGACCAGACCAATCTTTATCGCAATAAAAGCTAATTCG
CTTGGTGTTAGGGTTGCGTTGTTATGTGATATTCATGCCTCTTTTCTGTT
GTCCTACCTTTTGGCCGAATAGATCTGCATCTATAAAATGTTTTGTTAAG
TTATTTAGTTAGCACCATTATTGAATCAAGCGTTCGAATCGttcgcaaat
cgaacgttttcttccataatggcggaagctacatgacttttaacaaaaca
tgaaaaaaattcatgcGATTCTCACACCATCATCTTTCCATTCCATACTC
CTCAGGCAATGAAGACGGTGAACCATTTCTCCCAGAACGTCAAATCAGAA
TCATGGATAAACCGCTTAAAAGTAAGCTTGATGATGTGTTTCTTTTCTCA
GAATAATTCACTTTAGTTTCAATGTTGAAAGCTAGCCTGCATCGTCTGCT
AAAGGCCAATACAATGTTTAACCAACCCAAATCGAACAGTGTACAAACAG
AACCAATTAATTACCAACAAAAAACTTATTAGGTGACATTCTCCCCTTTT
TCGCAGCGATGAGTGGTATAGACTTGTTAAACTCGTTCGTTGGTCGACAC
CCTTTCTCCAAAGTTGCAGCAGATAACGATACCAAACGGAAAGCCAGGTT
GCAAGGTCGCTCACAAGAGGAAATGGAATTTTTAGAGCATCAACGGAAGT
GAGTTATCTTGCCAAAGAGATTTTCTTTCATGCATTTTATGTAAATGTCA
GCATTCTGTTTTCCTTAAAACTGACTGGGCCCATCGATATGGAACTTTAA
CTCTAGCGAGAAGCAGTAACTTTACTTTAGCTGTATACTAGATCCTTCCG
TAATAAAGGAAAGGATACCAAGTAAGAGAGGGATCGAAAGTCTTTCGTAG
GGTGTTACAAACGTTCCTTAATTAAATCCTGTTTTCATTAAACTTATTTA
AATCATAGAATGGTTAGTTATTTTTCGGAACGCTTTTCTTTTTGTAGATA
CTCACAATGGGTCAAACGTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010303XLOC_010303Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018375-exon-sc0000297-1491911889:202771..202898TCONS_00018375-exon-sc0000297-1491911889:202771..202898Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:202771..202898TCONS_00018375-exon-sc0000297-1510915933:202771..202898Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:202771..202898TCONS_00018375-exon-sc0000297-1575043694:202771..202898Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:214444..214655TCONS_00018375-exon-sc0000297-1491911889:214444..214655Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:214444..214655TCONS_00018375-exon-sc0000297-1510915933:214444..214655Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:214444..214655TCONS_00018375-exon-sc0000297-1575043694:214444..214655Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:214872..215014TCONS_00018375-exon-sc0000297-1491911889:214872..215014Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:214872..215014TCONS_00018375-exon-sc0000297-1510915933:214872..215014Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:214872..215014TCONS_00018375-exon-sc0000297-1575043694:214872..215014Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:215343..215394TCONS_00018375-exon-sc0000297-1491911889:215343..215394Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:215343..215394TCONS_00018375-exon-sc0000297-1510915933:215343..215394Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:215343..215394TCONS_00018375-exon-sc0000297-1575043694:215343..215394Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:215547..215648TCONS_00018375-exon-sc0000297-1491911889:215547..215648Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:215547..215648TCONS_00018375-exon-sc0000297-1510915933:215547..215648Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:215547..215648TCONS_00018375-exon-sc0000297-1575043694:215547..215648Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:215964..216052TCONS_00018375-exon-sc0000297-1491911889:215964..216052Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:215964..216052TCONS_00018375-exon-sc0000297-1510915933:215964..216052Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:215964..216052TCONS_00018375-exon-sc0000297-1575043694:215964..216052Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:216572..216648TCONS_00018375-exon-sc0000297-1491911889:216572..216648Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:216572..216648TCONS_00018375-exon-sc0000297-1510915933:216572..216648Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:216572..216648TCONS_00018375-exon-sc0000297-1575043694:216572..216648Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:216840..216927TCONS_00018375-exon-sc0000297-1491911889:216840..216927Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:216840..216927TCONS_00018375-exon-sc0000297-1510915933:216840..216927Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:216840..216927TCONS_00018375-exon-sc0000297-1575043694:216840..216927Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:217326..217391TCONS_00018375-exon-sc0000297-1491911889:217326..217391Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:217326..217391TCONS_00018375-exon-sc0000297-1510915933:217326..217391Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:217326..217391TCONS_00018375-exon-sc0000297-1575043694:217326..217391Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:217577..217718TCONS_00018375-exon-sc0000297-1491911889:217577..217718Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:217577..217718TCONS_00018375-exon-sc0000297-1510915933:217577..217718Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:217577..217718TCONS_00018375-exon-sc0000297-1575043694:217577..217718Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1491911889:218018..218042TCONS_00018375-exon-sc0000297-1491911889:218018..218042Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1510915933:218018..218042TCONS_00018375-exon-sc0000297-1510915933:218018..218042Clytia hemisphaericaexon
TCONS_00018375-exon-sc0000297-1575043694:218018..218042TCONS_00018375-exon-sc0000297-1575043694:218018..218042Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000297supercontigsc0000297:202771..218042 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.81659	13.493	18.0219	13.1904	5.99116	6.90889	12.147	14.8068	6.87463	11.7503	11.3072	8.53855	10.0946	11.8893	8.51036	9.7227	14.2596	10.1358	8.19794	5.48242	1.03633	1.72886	1.71741	4.76277	9.23633	8.51099	0.47194	0	0.193473	7.41565
Blast
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BLAST of TCONS_00018375 vs. Swiss-Prot (Human)
Match: GDAP2 (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=1 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 5.488e-102
Identity = 156/326 (47.85%), Postives = 221/326 (67.79%), Query Frame = 3 
Query:  192 DPLGLLSGIMEAEDLPTW---------SKVPVGKVLEPKEDKESPFPVNLDINEKVCLWEGDITKLKCDVIINSTNEALNDKNPVSERIHKVAGPLLREEVRQELQSCRTGEAKMTKGYELPARYVIHTVGPRYNTKYKTAAESALFMSYRNVLQLARENNLSSIGLGVINTTRRGYPPEEGAHIALRTVRRFLEKNIDAFQVVVFVVEPIDESTYKRLMPLYFPRDAREECYAAECLPSDVGNEDGEPFLPERQIRIMDKPLKTMS---------GIDLLNSFVGRHPFSKVAADNDTKRKARLQGRSQEEMEFLEHQRKYSQWV 1115
            DPLG  S  ++ + LP+W         S     ++ + ++   SPF  N D+N KV LW+GD+  L C  I+N++NE+L DKNPVSE I  +AGP L+E++ Q+L+ CRTGEAK+TKG+ L AR++IHTVGP+Y ++Y+TAAES+L+  YRNVLQLA+E ++SS+G  VIN+ +RGYP E+  HIALRTVRRFLE + +  + VVF V  ++E TY++L+PLYFPR  +EE  +   LP+D+GN +GEP +PERQIRI +KP              G+DL  SF+G H F+++  D D +RK  LQG+  E     +HQR Y++W+
Sbjct:    2 DPLGAPSQFVDVDTLPSWGDSCQDELNSSDTTAEIFQ-EDTVRSPFLYNKDVNGKVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDLKEDL-QKLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDATHIALRTVRRFLEIHGETIEKVVFAVSDLEEGTYQKLLPLYFPRSLKEENRSLPYLPADIGNAEGEPVVPERQIRISEKPGAPEDNQEEEDEGLGVDL--SFIGSHAFARMEGDIDKQRKLILQGQLSEAALQKQHQRNYNRWL 323
The following BLAST results are available for this feature:
BLAST of TCONS_00018375 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GDAP25.488e-10247.85Ganglioside-induced differentiation-associated pro... [more]
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