TCONS_00018385 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018385
Unique NameTCONS_00018385
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1211

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018385 ID=TCONS_00018385|Name=TCONS_00018385|organism=Clytia hemisphaerica|type=transcript|length=1211bp
AAAAGTAACAAAGTAATGATATAAATATACAGAATTacataaaaaattgt
ttggaaatttttgttttaccctaaatatagaaaattaataattaatattt
aaacttcaaaatgtctcttggtctgtaaatttattgcACCCGGAATACGG
CTATTTGTGGAATGCCCGTCATATTTTGACGTATCCGGACGAGAAGGGAT
CGCAGAGGCAAAATcacagaaaataatttttcttgtcaacttttttaacc
aaataaaTATTAGCTACCAACCATGGATGATTTTCAAGGATCTGAAGAGa
cTGCTTTTGTTGTGGAAGAAGTAAGCAATATTATCAAGGagtCTATTGAA
GGATCGATTGGTGGAAATGCATACCAACACAACAAAGTCAATCAATGGAC
TTCTAGTGTTGTAGAAACTTGTTTAAATCAACTCACAAAATTAGGAAAAC
CTTTCAAATACATTGTCACTTGCGTTATCATGCAAAAGAATGGTGCTGGC
CTTCATACAGCAAGTTCTTGTTACTGGGATAACTCTTCAGACGgTAGTTG
CACAGTAAGATGGGAGAACAAAACAATGTATTGTATTGTTTCAGTATTCG
GTTTGGCCATTTGATGTCTTTAAGATATATGGAGATATAATAAGAGGGCA
GATAATCTTTTGTAAATGATTTTAACAACAATTATTTAATTTATGAGACA
CAGAAACTTTCTGTCAAGCCAACCATGAGCGCGAGAAGGTTTTCAGAATG
CATTCTAGTGGTATCGTCAAGTTGAAATTCTGTATTCCTCTTTTCCTCAC
AGGCCTAAGTTTTATTTTGACAAGAGTTAAGATAAAATTGCTATTTGTCT
TACTATAGAATATAAGACATTCCTAAAAGTGTGACACTTTCTAGGTTGGA
GGGAGTCCTATTTATAAGGTTTTATTTTAGTATAGCTTTTTAGTTGTATC
TTATAATATATGATTTGTTATAAAATGTTGTTTGGTATTTCAACTGTGAA
GTTTGATGTCAACGCTTTTCAATAGGTGAAACCTCAagtaaaaatcttaa
ttttgaaaaaatgtttgcaATCAAAAGGTGTTCCATTGTATTTTGTGTTG
AGACTTTAATCATGCTTTCAAATGtaaatttctttatattttcaaaataa
atattatagCGTGTACTTTCTTTGTCGTCCTTTTTTCTACAATTTCTGCA
GACCAATCAAC
Run BLAST on NCBI

protein sequence of TCONS_00018385-protein

>TCONS_00018385-protein ID=TCONS_00018385-protein|Name=TCONS_00018385-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
MDDFQGSEETAFVVEEVSNIIKESIEGSIGGNAYQHNKVNQWTSSVVETC
LNQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCYWDNSSDGSCTVRWENK
TMYCIVSVFGLAI
Run BLAST on NCBI

transcript from alignment at sc0000297:109125..116801-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018385 ID=TCONS_00018385|Name=TCONS_00018385|organism=Clytia hemisphaerica|type=transcript|length=7677bp|location=Sequence derived from alignment at sc0000297:109125..116801- (Clytia hemisphaerica)
AAAAGTAACAAAGTAATGATATAAATATACAGAATTACATAAAAAATTGT
TTGGAAATTTTTGTTTTACCCTAAATATAGAAAATTAATAATTAATATTT
AAACTTCAAAATGTCTCTTGGTCTGTAAATTTATTGCACCCGGAATACGG
CTATTTGTGGAATGCCCGTCATATTTTGACGTATCCGGACGAGAAGGGAT
CGCAGAGGCAAAATCACAGAAAATAATTTTTCTTGTCAACTTTTTTAACC
AAATAAATATTAGCTACCAACCATGGATGATTTTCAAGGATCTGAAGAGG
TATAACCACTTTCTTCAATTATTTTTTTCAAATCATTATTTAACTCTAAT
TTATCAACATGTCTAGGAAGGTTTTTGATAAGCTTTATAAGGGAACTTTA
GCTAGCTACCGTCAGGCGTCAACTGCTCTCTAACTTGGGTCTATCTGACA
AAATTTGGGACAGCAATTCTGACACCATTTCACCAAACCTCCAAAGTCAT
TTAATTTGAGTTAAGGAACGGCGTATTTAAAAATACACGATTTTCTCTTT
CGATTTTACAGTAAGTGAAAATACAGACCAGATATGCAACAGTCCCATGT
TTCGACCAATCGTCCCAAGTTAGAGCAGTTGACGGTATGCTAAAAATTTG
AACAGTGTTGTGTTTGATGGGATCTACTAAGTTCCCAATTTACAAAAACC
CTAGTGTGTCAAATCAGGCAGGTCTGGACAGGATGCAAAATCCACACTGA
ATGCTTAGGGGCCGTCGACATTCGACTTTCGAATTTTTTAACGGCATTTG
GCCGTTAAGGGGGGGAGGGGGTCGACCATGTGCCGTTAACGGAAGGTCGA
AAATCTCTTTAGGGGTCAACTCACCACATATCAATTCTTTTCACCAGAAA
ATATCGATTTTTGAGACGTTTATTTCATACAAATGTTACTTTCCATATTT
CTTTTCCTCCTTTTATCAACTAAGATCTGCTAAGTCGCATACCTAAAGTA
TTCACTTCGCTATTTTTTAGAATAATTTTAACCAAAACAAACGACCCGAT
GTTTATGTCTCGTGTTCCTTTTGTTTAGACGGTCCGCGTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGGCCCT
TGAATTTCGCAGACGGTCGGTCTTTTTTCTTTGAAATGCCGCTATTCTTT
TGAGTATGATTACGGAGATAATTAATTCGCCCAACTTTCGGAATAAAGTT
TAGAAATTATCTCCGTTATTTTTAAAATGTAAACTGAGCGAAGCCGTAGC
GATATTAAAGATGGCTGACGAAACTGGACGAAACAACGATGAAAGTGAAG
GAGAAAATTTAGAGTTCCATCGATTTTTGACAATTTTTTAACTTTAGAGA
ATTTGATGGCCGTTAACGTAGAGGGGGGAGGGGGTCAGAACCATAACAGC
CAAATGCCGTTAAAAAATTTGAAAGTCAAATGTCGACGACCCCTTACGTT
TGTAAACTTTTGTGGGCTCTATCATAATAGCTGTCAACTCTCCCACATTG
AGTGGGAGACTCCTCTGCGTGACAACGATTTCTCCCGTGTGAAAAAAATT
CAGCCAAATCTTCCACATTTTCAGGATTTTCTCCCACATCTCCTGCATTT
CCAAAAATTTTCTGATTTTGGAAAATTGGGACGGGAAATTCCCCGATTCC
CCGATTCCCCGATTTTCTGGAAAAATTGGTTTTATCGGGAAAATTTTTCT
GACTTAAAGCTCTCCACATTTTTTAGTGAGGCAAAGTTGACAGCTATGAC
TCTATGGGCGTCCCAAAAAATTTATGATAGTTGAAAAGTGCCCTCCAAAA
TGGATAGTCATTTGGGAGAATGTGACGGTCTATTTAATATTTAACAAACT
ACTTCCAGCCAGTAAAACAGAAATTATCTTGTACCTAGGTAACAGCTGTG
TTAGAAAAGACAAATCAATTATATGATGTCATCATTTAAAAAAATTCCTC
TGGAGTAATTAGTTATTCTAAAGATTGTCGCGTTCTCCAAAACGATGATG
TTTTTTTTTTCAAGCCTAAAAAGCTGATTAGACAAGGTATGGCATTGTAC
AAAGTTATGGCAGGCTAGCTCTAAAGCTCTAAAGCAGCATCTAATAACAT
GAAAACCAGAATATGATTCTTTAATGGGAATCAAAACTATACCGTAACTT
GGTCTAATGTCGACACCCCTCCTCTAATTCCGACACCCTTTTTATCGGCT
GAAATTGATAGAGAGGTTGAAACTGTTTTTCTTTGCTTAGTGGTCAGAGA
GGAATAATGCTTTTTCAATTAGTGATTCAAGCTTTCATATTATTCCTGTC
TCTAAAGAAGGGTGTCGGAATTAGACAAGGGATGTCAATATTAGACCAAC
TTACGGTAAAGTGCACTTACAAACATCAATTTGTCAGATCTAACAAAATT
AATAACCACACTGTCATCATTGACAATAAAACAAACAATTTTCTGTCAAG
CGCGGTCCAAGGATTGAGCTGAGAACCCTCACAGAACGCCCGCGAGCTCC
CGCGTGGGTGAAAAACTTCAATCTAGAATTAGGTCTATACTGTATGGTAT
GATTGAAATGCTCAAAAAGATAGATTCTATTACTGGTACCGTAAGTTGGT
CTAATGTCAACATTCCTCACCCAGTTACAACACCCTTCTTTAAAGATAGG
AATAATAGGAAGGTTGGAAACGCTGATTGTAACTACATATTTTGCTTAGC
TATCAGAGAGAAAAACATATTTTGTCCATCAGTGATTCCAACCTTCCTAT
TATTCCTATCTCTAAAGAAGGGTGTCAAAATTAGAAGTGGAATGTTGACA
TTAGACTAACTTGAGGTATGTATTAAGAAGAGATAAAAAATAAGCTATTT
AATATCAATATGCTAAAAGTAAATAGAGCCTCTCGTGCTGAATATATTTT
AATATGCTGGGCACCATTTTGCTCAAAACTGGGAATCAGGAACTTCCAAT
TGACCGATTCCGTGTGACGTCATTTTCACCCACAATCAGCCATTTTTTCT
AAGAAATGGTAGAAAGAATATATACAGGATGGTTTAGTAACATCTTGATA
ATGATAGCTCGCTTGAACCTGCGCATATTTTTTCGTTTTGTGGGTGAAAT
TTTTGTCGGTTAGGAACAGGCAGCTTGCTTGAGGTTTGATTGAAGATAGT
CCCTAACTGGATTTTGTCGAATCAGTCTATACTTTATACTTATAACAGGC
AGGCTAGCTTTAAAGCTCTAAAACAGCATCCAGTAACAGCCCTCAAATTT
CAGGTAGGCATTCGACAGTGCCTACTTAAAAGCCAACCAAAGGGTTGTAT
GATTGGCAGTTCATTACTAACCATAATCATCAATTCTCTCGGCAGCAGAC
CATAAGTGTATTTTTGGTCAGCAAAGCCAAACTTTGAACCAAACATTTTA
GCTTTCAAATAGAAAAAAAACATTGCTGTAGCCTTCAAACAACTTTGTCG
ATCTATAATAAAGCTCAGATTGGCATTGCCAACCTAAAAACATGCCTATC
GGCCGCATTCGGTTGGAACTTATGTGCCGACTTATGTCTACTTGAAATTC
AAGGGCTGTCTAAATGTTCTGCCACAGCTATACTATTTTGCGCAGTTTGA
GGATTGAGCCGAACTGAAAAAAAAAAGCCACCCCAGCAGAAACCTGCAAA
TTCCCTCATGGGTAACAATTTTTAATCTGTCAANCCACCCCAGCAGAAAC
CTGCAAATTCCCTCATGGGTAAAAATTTTTAATCTGTCATTCATTTTCTC
AAGCGAAGAGTATTCAAAGCGATTCTAGCTTTATGATAGTGCCACAGATC
ATCAGTGGATAGTATTCAATTATCATTATCCCTTTATTTCCATTTCTGGT
ACTTTTGCAAAAAAAAGGAAAAATACAAAAGTTGCATTTTTTGCTGCACT
ATTCACATACTCTATGTGGCGCTTTTTTGCAAAATTCAAGAAACTAATTT
ACAAAGTCCAAATATGCGTTTCCCATAAATTTTGTATTAAGAGTTGGGCT
ATATTGTATAAATAGTTTTTTGAAAAATGACCTTTTTGTCCTGGGGTTCA
TATAATTTTCAAAAAATATTTCTCTTTTATAAGAAAATTTTTGAAGAAGC
TCACCTTATTTTAGGCACTCCCTTGAGGCTAATATTGTTTGTATCTTATT
CTTATTTCTAGGGCAAAATTAAGTTATTAAGTTGGGTTTGATACTAGGGT
ATTTTACTAATTTGGCCCTTGACCAGCTTAAATTCAGCCACCCAACACTT
GGTATTGTTTTTGAATTGTTCTTTACTTTGGCATTTTTGGGCCTCTTTGT
TTAAATAAAACTGTTATAATATAGTTATTATAGAACTGTTATTATAGAAT
GAAGTCAATCTCAAAGAATATAAATATTGTTTATTTTTTAGACTGCTTTT
GTTGTGGAAGAAGTAAGCAATATTATCAAGGAGGTAAATATTAAAAAATT
GAATATTTAGAATATATGATATAAATTATATGAATATAACCAGTTTGCTA
TCATATAACTACCCACTTTTATGTTTAAACCGAGTTGTTGTGCGTAGATT
TGTAATACCTGCGCAGATTTGTAATACCTGCGCAGATTTGTAATACCTGC
GCAGATTTGTAATAAACTTTGCGCAAATTTGTAATACTCGAGCTGCGCAG
AAATGTAATACTTCTCTGCGCAGATTTGTAATTTGTAATTTAGATTTTTA
CTTCGAGGGCATATGTTTCCCACAAAGAAAAGTTTCGAAAAAAAGACTTA
GAAAATAATCAGAAAATCACACAAAGGTTGTGTATCTTTTGTATGAACAT
TAACTTTATAAGAAACGAATCAATATATTTTAATTTAATGAAAATCGGCT
TTTGGCAGTTGGTTCTTTCAATACAAACATGGGATTGGGAATAAATAAGT
ATCAACTACCTCTTGAGATGATAAAATGTTGACAAAAACATTTTTATATC
ATTAATTGTTTTTTCATAACAAAGTGCTTATAAAAATAAATACGTCCACG
TTTATTCTCCGTAACTTGTTTACTTTGAAATAAACAGTTACCAACAAGAA
ATAATTTTTATTTTACGAGTTATTGATTAGTTTCTCATAAAAGCAGTGCT
TATAAAAATAAATATGTTCATGTTATTTTTCGTACCTTGTTTACTTCGAA
ATAAACAATTACCGACAAGAAATAATTTTTACTTTACAAGTTATTGATTA
GTTTCTTATAAAAGCAGTGCTTATAAAAAATAAATATGTTCATGTTATTC
TTCGTACCTTGTTTACTTCGAAATAAACAACTAGGTCACAGTGTGGATGT
AAACCACACTGAAACAACCACCTTCCATCACGCATCACGCTCGTGAAAGA
GCGCGCGCACATTATTAACGCCTACATGTCATCTCCAGTACATTTTAGAT
TATTCATTGAAAACAGATTACAATATAGTCATTTTTCATGTCTCGATTAT
TCAATTCCGAATAAAAGATGTTCAGGGAAAAAAAGAGAAACACCTGTGTA
ATCTAGTTAAAAAAACCGTAAGTAAATGGTAGACAAAGTAGTGTGCCAAG
GCAAAACGAGATTAGCATACCAGTATGAAAGAAACCGCCTCTGGCGGTCG
ATAACCGTCAAGAAATAATTTTTATTTTACGAGTTATTGATTAGTTTCTT
ATAAAAGCAGTTCTTTTAAAAAATTATGTCCGCGCTATTCTCATAAACAA
TTTTTATATTACCAGATAAATTTCTTATAAAAGCACTGCTTAGTAANCGC
TATTCTCATAAACAATTTTTATATTACCAGATAAATTTTTTATAAAAGCA
CTGCTTAGTAAAGAAATATTAATTGATTACTTATTCGATGTGCTCAATAA
TCACAACTTTATTTGGGTATTATTTTATAAGTATTTTTTAATGCATTTTG
TTTGCAGAATAGAATTTGGTTACCAATGAAAATATCAATTCCAAATTACA
AATCTGCGCAGAGAAGTATTACAAGTCTGCGCAAGTATTACAAATCTGCG
CACAACACAAGTTCGAGATTTTTGGGTGTTTTTTGAAATACTTGACCTCA
TTTCTTACTTTTATACACCAAATTTTATTTTGATTTCAGTCTATTGAAGG
ATCGATTGGTGGAAATGCATACCAACACAACAAAGTCAATCAATGGACTT
CTAGTGTTGTAGAAACTTGTTTAAATCAACTCACAAAATTAGGAAAACCT
TTCAAATACATTGGTAAGAAAGAAAACTTCCGCAACTTATATAATTTGTG
TAGAGTCTTTCATACTTCACTTCAAATCACTTGCGATTATGTTGTAATAT
GATGCAAAAACAAGGGGCTATGTTAAAAGTTATCTTTTCGTGAAATTACA
GCTTTCTTTAACATATGTATATTTCAATTGTATTTGTGAATACATTTTAA
TAACCAAATAGCTATCTTCTCACTATATTAGGAAAAAGACACTAACGNAA
TACATTTTAATAACCAAATAGCTATCTTCTCACTGTATTAGGAAAAAGAC
TTTAACATTGATTTGGGTTTGTTTTCAATTTTTTTACTAGTCACTTGCGT
TATCATGCAAAAGAATGGTGCTGGCCTTCATACAGCAAGTTCTTGTTACT
GGGATAACTCTTCAGACGGTATGTTAGAAAAATATTGATCAGTTTCTTCA
ACTCAAAAAATAGTATACTGATTACGTTATTACACAAATATTACTAGTCA
TTTTATTAACACGAATTGAAAAGTTTTGTATTAATAAAAAAACCCTTAAT
TAAAACTAGCCGTGGTGTCCTTGAAAAAGCAAATAAAATTTGCGTTAATT
TTGTGTGTGTTGATTTCAAGGCCATTGAATACTTGCCTAGTATTTTTCGT
GTAATAAGGTATATTGTTTTTACTTCCAAATTTAAGTGGAACCTTGCTGG
TACCTGCTAGTTTTTTGACGCGGATTGATTACAAATGATTTCCTTTTTTT
GTGTTTTAGGTAGTTGCACAGTAAGATGGGAGAACAAAACAATGTATTGT
ATTGTTTCAGTATTCGGTTTGGCCATTTGATGTCTTTAAGATATATGGAG
ATATAATAAGAGGGCAGATAATCTTTTGTAAATGATTTTAACAACAATTA
TTTAATTTATGAGACACAGAAACTTTCTGTCAAGCCAACCATGAGCGCGA
GAAGGTTTTCAGAATGCATTCTAGTGGTATCGTCAAGTTGAAATTCTGTA
TTCCTCTTTTCCTCACAGGCCTAAGTTTTATTTTGACAAGAGTTAAGATA
AAATTGCTATTTGTCTTACTATAGAATATAAGACATTCCTAAAAGTGTGA
CACTTTCTAGGTTGGAGGGAGTCCTATTTATAAGGTTTTATTTTAGTATA
GCTTTTTAGTTGTATCTTATAATATATGATTTGTTATAAAATGTTGTTTG
GTATTTCAACTGTGAAGTTTGATGTCAACGCTTTTCAATAGGTGAAACCT
CAAGTAAAAATCTTAATTTTGAAAAAATGTTTGCAATCAAAAGGTGTTCC
ATTGTATTTTGTGTTGAGACTTTAATCATGCTTTCAAATGTAAATTTCTT
TATATTTTCAAAATAAATATTATAGCGTGTACTTTCTTTGTCGTCCTTTT
TTCTACAATTTCTGCAGACCAATCAAC

Coding sequence (CDS) from alignment at sc0000297:109125..116801-

>TCONS_00018385 ID=TCONS_00018385|Name=TCONS_00018385|organism=Clytia hemisphaerica|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000297:109125..116801- (Clytia hemisphaerica)
GTAGTTGCACAGTAAGATGGGAGAACAAAACAATGTATTGTATTGTTTCA
GTATTCGGTTTGGCCATTTGATCACTTGCGTTATCATGCAAAAGAATGGT
GCTGGCCTTCATACAGCAAGTTCTTGTTACTGGGATAACTCTTCAGACGT
CTATTGAAGGATCGATTGGTGGAAATGCATACCAACACAACAAAGTCAAT
CAATGGACTTCTAGTGTTGTAGAAACTTGTTTAAATCAACTCACAAAATT
AGGAAAACCTTTCAAATACATTGACTGCTTTTGTTGTGGAAGAAGTAAGC
AATATTATCAAGGAGATGGATGATTTTCAAGGATCTGAAGAGGTAGTTGC
ACAGTAAGATGGGAGAACAAAACAATGTATTGTATTGTTTCAGTATTCGG
TTTGGCCATTTGATCACTTGCGTTATCATGCAAAAGAATGGTGCTGGCCT
TCATACAGCAAGTTCTTGTTACTGGGATAACTCTTCAGACGTCTATTGAA
GGATCGATTGGTGGAAATGCATACCAACACAACAAAGTCAATCAATGGAC
TTCTAGTGTTGTAGAAACTTGTTTAAATCAACTCACAAAATTAGGAAAAC
CTTTCAAATACATTGACTGCTTTTGTTGTGGAAGAAGTAAGCAATATTAT
CAAGGAGATGGATGATTTTCAAGGATCTGAAGAGGTAGTTGCACAGTAAG
ATGGGAGAACAAAACAATGTATTGTATTGTTTCAGTATTCGGTTTGGCCA
TTTGATCACTTGCGTTATCATGCAAAAGAATGGTGCTGGCCTTCATACAG
CAAGTTCTTGTTACTGGGATAACTCTTCAGACGTCTATTGAAGGATCGAT
TGGTGGAAATGCATACCAACACAACAAAGTCAATCAATGGACTTCTAGTG
TTGTAGAAACTTGTTTAAATCAACTCACAAAATTAGGAAAACCTTTCAAA
TACATTGACTGCTTTTGTTGTGGAAGAAGTAAGCAATATTATCAAGGAGA
TGGATGATTTTCAAGGATCTGAAGAGGTAGTTGCACAGTAAGATGGGAGA
ACAAAACAATGTATTGTATTGTTTCAGTATTCGGTTTGGCCATTTGATCA
CTTGCGTTATCATGCAAAAGAATGGTGCTGGCCTTCATACAGCAAGTTCT
TGTTACTGGGATAACTCTTCAGACGTCTATTGAAGGATCGATTGGTGGAA
ATGCATACCAACACAACAAAGTCAATCAATGGACTTCTAGTGTTGTAGAA
ACTTGTTTAAATCAACTCACAAAATTAGGAAAACCTTTCAAATACATTGA
CTGCTTTTGTTGTGGAAGAAGTAAGCAATATTATCAAGGAGATGGATGAT
TTTCAAGGATCTGAAGAGGTAGTTGCACAGTAAGATGGGAGAACAAAACA
ATGTATTGTATTGTTTCAGTATTCGGTTTGGCCATTTGATCACTTGCGTT
ATCATGCAAAAGAATGGTGCTGGCCTTCATACAGCAAGTTCTTGTTACTG
GGATAACTCTTCAGACGTCTATTGAAGGATCGATTGGTGGAAATGCATAC
CAACACAACAAAGTCAATCAATGGACTTCTAGTGTTGTAGAAACTTGTTT
AAATCAACTCACAAAATTAGGAAAACCTTTCAAATACATTGACTGCTTTT
GTTGTGGAAGAAGTAAGCAATATTATCAAGGAGATGGATGATTTTCAAGG
ATCTGAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010311XLOC_010311Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018385-exon-sc0000297-1575043694:116503..116801TCONS_00018385-exon-sc0000297-1575043694:116503..116801Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1575043694:112319..112360TCONS_00018385-exon-sc0000297-1575043694:112319..112360Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1575043694:110539..110662TCONS_00018385-exon-sc0000297-1575043694:110539..110662Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1575043694:110134..110211TCONS_00018385-exon-sc0000297-1575043694:110134..110211Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1575043694:109125..109792TCONS_00018385-exon-sc0000297-1575043694:109125..109792Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1510915933:116503..116801TCONS_00018385-exon-sc0000297-1510915933:116503..116801Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1510915933:112319..112360TCONS_00018385-exon-sc0000297-1510915933:112319..112360Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1510915933:110539..110662TCONS_00018385-exon-sc0000297-1510915933:110539..110662Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1510915933:110134..110211TCONS_00018385-exon-sc0000297-1510915933:110134..110211Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1510915933:109125..109792TCONS_00018385-exon-sc0000297-1510915933:109125..109792Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1491911889:116503..116801TCONS_00018385-exon-sc0000297-1491911889:116503..116801Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1491911889:112319..112360TCONS_00018385-exon-sc0000297-1491911889:112319..112360Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1491911889:110539..110662TCONS_00018385-exon-sc0000297-1491911889:110539..110662Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1491911889:110134..110211TCONS_00018385-exon-sc0000297-1491911889:110134..110211Clytia hemisphaericaexon
TCONS_00018385-exon-sc0000297-1491911889:109125..109792TCONS_00018385-exon-sc0000297-1491911889:109125..109792Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018385-proteinTCONS_00018385-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000297supercontigsc0000297:109125..116801 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
94.5719	92.8785	77.9742	77.8544	120.851	92.9322	108.614	111.271	99.1475	82.3785	66.1838	79.8211	43.1871	35.6797	39.2655	38.2542	68.0976	70.043	40.3859	51.7924	82.0918	80.1999	69.2989	71.0488	95.7974	95.3698	109.334	90.3114	83.1958	76.6754
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005334Tctex
Blast
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BLAST of TCONS_00018385 vs. Swiss-Prot (Human)
Match: DYLT1 (Dynein light chain Tctex-type 1 OS=Homo sapiens GN=DYNLT1 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.436e-53
Identity = 93/113 (82.30%), Postives = 108/113 (95.58%), Query Frame = 3 
Query:  273 MDDFQGSEETAFVVEEVXXXXXXXXXXXXXXXAYQHNKVNQWTSSVVETCLNQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCYWDNSSDGSCTVRWENKTMYCIVSVFGLAI 611
            M+D+Q +EETAFVV+EVSNI+KE+IE +IGGNAYQH+KVNQWT++VVE  L+QLTKLGKPFKYIVTCVIMQKNGAGLHTASSC+WD+S+DGSCTVRWENKTMYCIVS FGL+I
Sbjct:    1 MEDYQAAEETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113
The following BLAST results are available for this feature:
BLAST of TCONS_00018385 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DYLT12.436e-5382.30Dynein light chain Tctex-type 1 OS=Homo sapiens GN... [more]
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