TCONS_00018571 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018571
Unique NameTCONS_00018571
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1875

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018571 ID=TCONS_00018571|Name=TCONS_00018571|organism=Clytia hemisphaerica|type=transcript|length=1875bp
ATTCGAGTTATAGTTTTGCAAAAGAAATAGTTTTTATACCTGCAGCGTCG
GCTACCAAAGCACCAATTATTGTTTGAGCTGAGCGTTTTGCTTGTTGTTG
GGAAGGCGCCATATTTTTAGACTGTCAGGTGCAGCAGTGGGTGCAGTGAG
CAGTAAGCTCTACTTCAGAACggactttcgctttcgttttcggGTGAAAG
ATTACATCAACGATATCGATACCGTAGCTTTTTATCCTTATTTGGAAGCT
CAATGAAGGAGTGTAGCAAGAAGGCGGGAAACTCCTACGCACGGTTTATA
TAATAATCACgcacatttttttattctttcgaaataaacgtGAGCACGTT
GGATTTATCAAAAGGGAGAGTAATTTGACCATCACGATGCCTCCAAAACC
AGAAGTCGATAATGAAGAAATCTCAGACGAAGAAATTGAAGCTGCTGAAG
CTGGACCAAATATGGCTGAATTAATGAAAAATCCTGAGCTCATTGCTGCT
GTACAAGCTAAACTTAATGGACTATTGGGTGACAGTACTGGATTTATTGA
TATGTTGCCAGAGTGTGTCAAACGTAGGGTTCATGCCCTGAAGAATATTC
AAGTTGAATGTGCCAAACTTGAaggaaaattttatgaagaagccCATCAA
TTGGAAATGAAATATGCAGGACTTTTTAAACCTTTGTATGAAAAACGAAG
TGAAATAGTGAATGCTATCCATGAACCTACAGATGAAGAGAGCAAATGGG
TTGAGCCAGGAGAGGAGGAAGAAGATGAAGAATCAAAAGCTGCTGAAGTC
AAAGATGAGAAAATGGACACTGAAGAAAAATCAGAGGAGGAAAAGACTGA
GTCTGAGAAATTTGCTGATGAagttaaaagtaaattaaaacttgatatgG
ACGAAAATACAAAGGGTATTCCTGAATTCTGGTTGACTGCCATGAAAAAT
GTGGAATTATTAGGTGATATGATTCAGGATCATGATGAAGAAATCCTAAA
ACATTTGACAGATGTGAAGTTAATTTTCACTGGCAAAAAGGAGGGATCCA
GTGAAGAATCTGAAATGGGATTTGTTTTGGAGTTTATGTTTCAACCAAAC
GAACACTTCACAAATACTGCTCTAACCAAAACTTATAAAATGAAATCAGA
ACCTGATGCTGACGACCCCTTCTCCTTTGAAGGTCCTGATATCGTTTCCT
GCACTGGGTGCAAGATAGATTGGAAAAAAGGAATGAATATTACCCAAAAA
CAAGtcaagaaaaagcaaaaacacAAGGGGCGCGGCCAGACACGAGTTGT
CACCAAAACTGTTCAGAACGATTCAttcttcaacttcttcaatCCTCCAG
AAGTTccagaaaatgaagaagatatGGATGAAGAGATTGAGGCCTTGTTA
GCAGCGGACTTTGAGATTGGTCATTTCTTCCGTGAGCGGTTCATTCCAAA
AGCAGTTTTGTTTTACACTGGTGAAGCGATCGAGGATGATAGCGATGATG
AAGACTTCGAAGATGAAGAGGGAGACGAAGATGACGACGAcgatgatgat
gacgatgaaAATGATCCCGACTTCAAACCCGATGGGGAAAAACCTCAAGA
GTGCAAACAACAGTAATAATGGAACTCTGGTATCCCACCAAACCACCTCA
CGTGTGCTTACTTGAAGTTACAAACATCTCAAGCCATCACACATCTTCAA
CCCAGTGCTCACACAACAACTTCGGCTTGACAAGTTACCCTGTTCCTGTT
CAGTTCTTTTAAAGAAGGGAGCAAGAAGCATATTTAATACTAACCAACCG
ATCTTGTACTATATCAATTAAATTTATACTCGGAGATAAATTTTGGTAAT
TTCtatgtaaaaaaattgtttagaa
Run BLAST on NCBI

transcript from alignment at sc0000301:36715..51972-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018571 ID=TCONS_00018571|Name=TCONS_00018571|organism=Clytia hemisphaerica|type=transcript|length=15258bp|location=Sequence derived from alignment at sc0000301:36715..51972- (Clytia hemisphaerica)
ATTCGAGTTATAGTTTTGCAAAAGAAATAGTTTTTATACCTGCAGCGTCG
GCTACCAAAGCACCAATTATTGTTTGAGCTGAGCGTTTTGCTTGTTGTTG
GGAAGGCGCCATATTTTTAGACTGTCAGGTGCAGCAGTGGGTGCAGTGAG
CAGTAAGCTCTACTTCAGAACGGACTTTCGCTTTCGTTTTCGGGTGAAAG
ATTACATCAACGATATCGATACCGTAGCTTTTTATCCTTATTTGGAAGCT
CAATGAAGGAGTGTAGCAAGAAGGCGGGAAACTCCTACGCACGGTTTATA
TAATAATCACGCACATTTTTTTATTCTTTCGAAATAAACGTGAGCACGTT
GGATTTATCAAAAGGGAGAGGTAAACTTTTACATTTAAAGAATTTATTTT
TATCACGTTTGTTTTCCTCAACAATTCACAACTTCAACTGGTATATACTA
AGGCATTGTTGGTTGGTTACTTGTCTTGATGTATACTTGTTGAAGCCACA
ATTAACTTAGTATCCAGCAGTGGTGTCTTGTTTTGTGAAATTGTCTTTTC
AGTGTGTGATAAATTTGTCAATTAATAAATGGTCTTAACTTAGCTGTCAG
CTGCGCAGTGCAAGAGTCTACTCTTGCATTTCCGAACATCCCTTTTTCTG
AAATAGTTTTCTGCTTTGGGAAAATTCAGTGATCAAAGTTCTTCCGTCTC
ATACAGATTTCCGTCTCACAGAAATTTTTGGCAAATTTTTCCATCTCAGT
CAGAAATGGTTATTTAGCGAGAAATAGTGATTTTGTTCTCTAGAATAATT
CCATCAAAGTTTTAAAAATTGGATTTCAAGCATGTTATATACCTTGTATA
TACATAGTATGATGACGTTCATATATTTTTATTTTTCAACCTATTTTAGA
TAGATATATCCAGACGATGTCAATCGAACGAATCGAACGCCGAATCAATT
GAACGAATCGATTGAAATTTGATTGCCGAACGCAATCGAATGCCAATCAA
ATATTACCGCGATNATTCTTTTTCAAACTTCGAAAAACCATAAATAGCCT
CATTTGCATGTGTTGACGTAATTTTTAAAATAATGAAGAAACACCCTCGA
CCTTCAAAACGCGTTTTTTTCTCAAACCCCCTTATTTAGGAGAGACAAGA
GCGACTCACTTTCTGTTTGACCCGCGTTTTGACCGCGCTTAAACGCGTTT
CTTAAATATGGCTCGATCTATATTATTACTTTTCACAAAATTCTCATGAT
GTAGATCGGTCTTTAGATTGATAGACCCTAACCGTCCTAGGTCCACTAAA
CAAAAGCAGAACTCAACCAAATTTTGCTAGAAGGGAGAAAAAAACGTGCT
GAGTCGATCTATGAAGTTCAAAACTTGCGCAAAATGATGAGAAGGCCAAA
AATTAACGAAGAAAGAAAAGTCTCCTAGTTAAGAGAAAGAAATCTCCTAC
TTAAGAGACCTTCTCTTAAATAGAGTATATCTCTTATTTAGGGCATAATC
CTCGACTGTATATACATAGTATGACGTTCATATATTTTTATTTTTCAACC
TATTTTAGATAGATATATATTTTCGCTGTATAATAGGCATTTTAAGAACA
TTCTGAGTTGTTTCAATTAATAAATTTAGTGCCTTTTTAGCCAATCTAGG
GGTTAAAAAATCTGAAAATTTTCTGACCCTCGGTCCCAACCATGGTGGGG
CCTGCAGGTGTCACTGTATACCGAATTATCTCTATCAAAAAAAATTTCCA
TCTCACAGAAAAAAACTGCTTTGACCACTGAAAATTAATTGTCAAAAAAT
TTTTCCGATTAGGGAAAAAGTCAGACGATGTCAATACAGACAGGGCCCTC
CTGGCACTCCGGAAACTTCTGGAGTTTTCCGGAGCAGCTAAAGAACACTA
TTTTTCTCTCCCGAAAGTTCTGGAGCTATTCCAATGATTCCGAAGCAATT
GTGATTTTTATCAGTTTCTAAAAAACCGTTTAAACATGGTTGTAAAAAAT
ATTTGTCCCCAGGTTATGGACACTTTAGTCAAATAAAATACTTTGAGGAA
GATGGCTCAGCCAATGAAATTGAATTTGTCACATTAGCTAGATTAGAAAG
CATCACTGGTCAAAATATTGAAACTTCCATTAGTCGGCTGATTTTTTTTA
AGGGGGGGCGTACGGCAATCTGGAATCCCGTCATCCCGTAAATTTTTCAA
GTAAATCCCGTCATCCCGTGGTTTTTTCCCGAAAATACCGATCCCGTGAA
GAATTTTCGTAAAACCAAGAAAGGTAAATCATAGTAACAGAAGGATCGCT
CCCCCTTCAATGGGTCAATCCGTTACGCCGATCCCCTCTGCTTAAAATGT
ACCTGTCCCAAGAAAAATGCCTTTTTTCAAGAACTTTCGCCAAAACAAAT
TTTGTACATATAATGATGCAAGTTATTCCCTAATTTGGATAATGTTTTAA
ATAATTACCAAATTACAAAAAGTTCTGTCTCCCATCGTTACAGATTTCCC
TTTAAAAACCTTTACCCGCCTCTTTATGAAAATCTACCTTGCCTTATTAT
TTATACCTTCCCAGCTGGCACACAACGTTGTTTCTACGTTTGTCTAACGT
TATATATGGACGTTATGAACGTTAGATGGATGTTGAAAACCCGGGGGGCA
CTCGATTTTGAAAACGACCGTACGTTCGGCCAAAAATCATGTCTCTTAAA
TTGGACCCTTACAGTGCCGGAAAAATTTGGCTGAAAATCGACCCTTACAG
TGCAATTTTTCGAAATTTTTTGCCCTTTTCAGTAGGGCAAATTTTTTTGA
AATTTCTCAAATTTTACCTCAAAATTTGGTGAGGCGGTTTAAGATGGCAC
AAACAAACACGTTATACATTTCTTCTCATGAAAAGAGAATGCTCTCAACA
ATTTGCCAATTGCCTCCAAAAATGTTGCTGTGTGGACCATTGTTGATGCT
ATCTTTATACAAGACGTTTGTAGTCCACAATATAAAGAACATTGTCAAAC
AAGTATTCGAATATTTAAAGCCCCGTTTACACTTTAATTCTCTGGTTGTG
GTGAGAATTGCGTACCGGCTGTACCGTCCTTCTATGATTTTTATCGAAAT
ACCGTATATTTTTACTCAAAATACCGTATCCCGAGATTGAAATCTGACAA
ATACCGTCACCGTGGGTCATCTGAAATCCCGTCATCCCGTAGTTTTTTTT
CACAAATACCGTTATCCCGTGTTTAAAAAAGCCTTATCCCGGATACCGTG
AAACCGTACGCCCCCCCTTTTAAGTATGCGTGTGCGCAGTTAGTGGAAGC
GCACTGGAACATTCCGTAGTTCAGGTGCAGACCGCCAATCACCAAAAATC
GTGCTCCGGAACTCCGCAATCTTCCAGCGCTCCAGAGCACGAAAAAAACA
GCACTTTTTGCTCCGGACGTTTCCAGAGCACCGGGAGGGTTCTGTCATTA
CACCTTTCCCATATTGCGAAATTCTCAGAAACAGCCTGGGAAAATGTGCG
CTCCACCGTTGTGCATGAAATTGTTTGGGAAGTAAACTGACACGTTCTTG
CCTGCAAGGGGTTAGGGGAAAGTGGGTTTTCAGCTTCTAACTTTTGATAG
CGATCTTCTTTTAGCACAAAAATTTCAGGGTGGTATAATATCATAAATAG
ATTGAACATACTAAAATTTGAGGGGATTTTGATCTACAGAACTTAAGAAA
AGCTTAAAAAACAAACTCTCTAAGGAAACCCAGGCAAAAACAGGATTATT
TACCTCCAGAGACCAAACCGTGGAGAGCATCAAATTACGGGAAAGGTGTA
TTAAGGTGTATATATAGGTGTTCGATTACTGAACCAAATCGAACAGTCAT
CACAAACCAAGAAATTCCAGTAAAGTTCCATTACTTCGATTGATGTTCAA
GTGTTTGATTTACAGTTTTCGTTCACAAATTGTCTCTTTTCTGCTAATCA
AATCCAATGATTGTTGGGGATCGTTTAGGCTAGAGCTAGCAATAACTGGA
ACCATTCATACCTTCCACCCCACCCTAGCTAGATGGTGGGCTAAACGGTT
TTCCAAAAAAGTTGAAAAGGGTGGGGTTCAGAGAGTTTCTAGATTTAGGG
TGGGGTTGGTGGCAAAGGGTTGGGGGCTTTTTTCAAGGGTGGGGTTGAAG
ACTTTTCCTTCAATTTTTATATTGTGTTTTGTTTTGTTTTTTAATGGTTT
TTAATCATCATTTAATCATCTTTTCAAACGTCTATCTCTTGAAATAATTC
GTCAAGATAATGAAAAATTCAAACATTTTTGTTATTTTAGTATAAAGATA
AAAACTGGACTTACTCTGCTTCAAGTTCTAAGAGTTTGGAAACATGTGGG
ATTTTTTTTGTTCTTTTGAAGGGTGGGGTATGGATATTTTGGTGGTTAAG
GGCGTGTTTGCTCTGAAAGGGCAGGGTTCAGAGAGTTTCTAGATTTAGGG
CGGGGTTAGTGGCAAAGGGTGGGGGCTGTTTTCAAAGGTGGGGTATCAAC
CCCGTAGGAAAGTATGCTATTTGAGCTACAAAAACTTAATCGAACTGAAT
ATTTTCCGGTAAAGTTTGAAATTGACCCTTTCTTAGTGGACAAGGATTCT
CCCTGCTTTGAATATAGGGGGTGAAGGATATAGCATTTTTTGAAAATTTA
CCCCAGACATTGTGACTTTGGACCCCCGGGACAAGCATCAGACATTCTTC
AAAATTACCCTCAAACAGGGTAAAAATTATATATACATACAGATAGAGCA
AATTTACCCACCCCCCCAAAGAAACTATATCCTACACAATATTTATAGTC
AACATTTGGTCAGCAAAGTTTTGAATAACTTATCTGGCAGGGAGTCAGTC
AATCGGTTAGTTTTATACTATGTGATTTTTAGAAGAGATCACATCACCAC
CCTTTGACAGTTAGTATGAAATATACAAAGCGATTCCAAATTTAAATTCT
CCAAAACCACCCCTGTGGTCCCTTCTACCTTACCCCCAGAAAAATCAAAA
TTTCCCATCCCCTTAGCCCCCCCTATTTTTAGAGATTTGTGGGAACCCCT
ACTTTGAACCATCTGACACATTGAAATTCAAGGAATTGGGCATGATTTTG
CTGAAGCATAGAATATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTAAAACAGCAAGACAGTTCAACAAATGATATTTCTGTAACGTATGG
TCAATCTTGAAGACATTCAGTGCATGGAGCCTACAGTTCTTCCAAGATAT
GTTCCACAATTTTCTTATCAACAATACAGACCTTGCATAAAATAAACTTT
ATTATTCTCTCTCAGTAATTTGACCATCACGATGCCTCCAAAACCAGAAG
TCGATAATGAAGAAATCTCAGACGAAGAAATTGAAGGTTAGAAGCTTGAT
TTAAAATTTAATTTTAATTTTGTTAAGTCTGAGCAATGAAAGATTATGTT
GTTTTGGGTGGCTTTACAAAAATGATATTTGAATTTTATTTAAATTTTTT
ACTGGTCAGCAGCAGGTGATAACTTTGCGATGACATTGTCATCTAAATGA
TGGGTTTCTTTTCTTGTTAAAGTTTATTGATCATAGGTTAAAAGTTATTC
ACACCTCGTGGTGTATTATGTTTAGGGAATATTATGTTTAGAGAGTGCAA
CGAGAGAAGTGGTTTTTAGCCTTTGGTGGAATTTAGCCTTTATAAATGAT
TTGTTTTTCATGTTATTTATTTTAAATTGACAAACCTATCAACCCCTTGA
TTTTCTTTCAGCTGCTGAAGCTGGACCAAATATGGCTGAATTAATGAAAA
ATCCTGAGCTCATTGCTGCTGTACAAGCTAAACTTAATGGACTATTGGGT
GACAGTACTGGATTTATTGATATGTTGCCAGAGTGTGTCAAACGTAGGGT
TCATGCCCTGAAGAATATTCAAGTTGAATGTGCCAAACTTGAAGGAAAAT
TTTATGAAGAAGCCCATCAATTGGAAATGAAATATGCAGGACTTTTTAAA
CCTTTGTATGAAAAACGAAGTGAAATAGTGAATGCTATCCATGAACCTAC
AGATGAAGAGAGCAAATGGGTTGAGCCAGGAGAGGAGGAAGAAGATGAAG
AATCAAAAGCTGCTGAAGTCAAAGATGAGAAAATGGACACTGAAGAAAAA
TCAGAGGAGGAAAAGACTGAGTCTGAGAAATTTGCTGATGAAGTTAAAAG
TAAATTAAAACTTGATATGGACGAAAATACAAAGGGTATTCCTGAATTCT
GGTTGACTGCCATGAAAAATGTGGAATTATTAGGTGATATGATTCAGGTA
AATCAATGCTTATTCCTTAATAATGTTCGGTTGATACTGAGTAAAAAGTG
TGACTGATTGTATCCATCAAGACTAAGAGGTGGGGAGAATTTTTTTAGCA
TAAGTAAGAGCCTGTGATTTAAGTAATTAATCTTGTGTCCAAATACCCTT
GGGTACCTAATAGCCAGGGGGTTGGGAAAAAGCAGCAGGGGGGTGGAATA
AAAATGTCCTGTGTGGAAGATTTCCGAAAAAGAGGCTAATACAGCAGAAT
TAAGACAAGAGGGAACTTTCAAAACATTTTCCCAAAAATTTAATAAGCGA
GGGGTGCAATAACAATTTTTGTGGGTGGAAAATTGTGGAAAATTTTCAAA
AAATTAATTAGCGGGGGCAGCTATTAGGTACCCAAGAGTAAGTTTAAATA
CTGAAAAAATTTCCAAAACTCTTTTTAAAGGCTGGTCTCCACGCGCTGGG
ATCACACTTTTTCAAGCAAAAGTTGGCAATATTGGTCAAAAGAAAATAAC
GTAAAGGTTTAAAAAAGTAAAATGTCAACTTTTTCAAGCGTGCGCCACAT
TTTTATGATGAATCTTTTTTCTAAGCAAAAAGGATTGATGCCAAAAAATG
CCAAAGATAAATCTTAAGAAATCTTCAAACCAAAATTATCATTTTTCAGG
ATCATGATGAAGAAATCCTAAAACATTTGACAGATGTGAAGTTAATTTTC
ACTGGCAAAAAGGAGGGATCCAGTGAAGAATCTGAAATGGGATTTGTTTT
GGAGTTTATGTTTCAACCAAACGAACACTTCACAAATACTGCTCTAACCA
AAACTTATAAAATGAAATCAGAACCTGATGCTGACGACCCCTTCTCCTTT
GAAGGTCCTGATATCGTTTCCTGCACTGGGTGAGTTTTCTTTTCAACAAC
CTGTTACATAGCCAAAAAAATTTGTAAAAATATTCTGTAGACACCCTCGT
TCTGCCTCATTGTTCTCTACTTGGATTACCATCCCTTTCCCATCCATATT
GCCAAATTTACTGAAGCCTGCAGGAAGGTAGGAAAACAGACTCCTGTTAT
CGGGCCAAGGCCTTCAAGGTCTTGACTCTCAATGCAAAAAAGTTTTATTA
ATATTCCAATTTATAGGAAGAGCTTAAGTTAAGTAGGGATACTAGTAGAA
TGAAACTACCTAAAGTCTGTCTCAATATAATTTGCAGCAGAGACAAAAAA
GACTGTAACTTTTGATAAAATTCAAATTAGATAGCGGTGTTGTGCTTGTT
GAAAAGACAAACAGGAGTGGGATATTATCAAAAAAAAAAAATTCAAAAAA
AATCGAAGAATGATGATTGAAAATGAAGAAGAAGAAGAAGAAGAAAATCA
GCATCTTCAATAATTGTGCTATAATCATCATTTTCACACGAGTGACAGTT
TGATCTTAGAATGTGATTTAAATCAAAAGGTCACTAATTGACTTCAAAAA
CCACCAAAAAACAACAAAAAAAGAGTCCTTTTTATGTCGACCAGGGCAAA
GTTTTTAAGCTGTATTTTTTGAATTTTTTTCCCATTTATGACAATCTAAA
ATTGAAGAATCTCTTGAAATAAAAATGAAGAGCATAGCATTATTATATAA
GAAGTTGATTTTCTTTTTCATTTTTCCATTTTTTGAAGATTTTTCTTTTT
TAAACGAGCACAAAACCGTTTTCTAATTCGTTGTATCAAGTAAAGCTATG
AATCAAGGAGAAGTTATCAAATATCTAATCATTTTTCAGGTGCAAGATAG
ATTGGAAAAAAGGAATGAATATTACCCAAAAACAAGTCAAGAAAAAGCAA
AAACACAAGGGTGAGGTTCTTAAAAAATATTTTTTCTCAACACTGATTTT
TAGGGTTGAAAAGAGATTCCAACATGAAATAGTAAGAATACAAGAAAATT
TAAAGGATGCTAGTTGGTAGATTCCCTGAGACTTTCATGAATTTTGGAGA
ATCTTTAAAAGAGTTTTTAGCGCAACTGCATTTTTGAAAAAATGAAACAT
TTTTTATTTTATGTTTTGTCTGTTAGTTTTTTTCAGTCATTTTCTTTTTT
TCAGTCATTTTCTTTTTCGTTCTTTCCCGTGCGGTTGTCTGCAAGGCATT
TCGGACTTTAGGTTTCGAACCGGGTTCTGGGTCTACTTTTTGAAAATTTG
TGTTTTTTGTATAACATATTGATACTTGTCGTTTGTCGTTTGTCTTGTTA
TTGTCTCTTTGAACTTGTTTTTTTGTCTGTTTAACCTTTTTTGTGATCTT
GACTTGGTGCAAGTATGTTTCTTTGTATTTATATGAGAGTTTATGTATCA
TTTTTATGTTTGTTAGTTTGGACTGTGGGTCGGTTCAGGGTTATAGAATC
TTTTCTTGACAGAGTGTTTGATTGGTTTGATTTATATATTCAGAAAAATT
TAAAAAATTTAAAAAACCGCACAATCATAAAAATATTAGTCCCTTTTTAT
GTTTAATTTTTATTTTATTTAGTATTTTCAACACTTGCTCTCCTTGAGGT
CAGATATCAATATTCTGAATATTTTTTAGGGCGCGGCCAGACACGAGTTG
TCACCAAAACTGTTCAGAACGATTCATTCTTCAACTTCTTCAATCCTCCA
GAAGGTGAGCACTCCACATTCCACTTCATTGAATGGGGACTTTCGAATCT
ACTTCCTACCATCACCCAATTTTGGAAGGTTGTCTCCTGGTAAAAATGTG
TATAACGTGGGGCAGTGCTAATTTGAAAGAAAAACGGAGGTTTTATAGGA
CATTTTAACATAGGGATTACCCAACTGTTGGTCCTCTCAGAACAAGCCTT
GTCAAAATATGATGATCATTTCTTTTTGTCTATATTGATACTTTATTATC
CCTCAGAATGCCTCAAAATTGCTAAAATTTCCTTCATATCTAGTGCTGTT
GGAATACAATAAGCAGATATTCAACGAACGAAACCTATTGAATATTATGA
GCAAGTTTACCAACTTTGTAGATTTTTCACCCCCCCCCCCTCCTGGACAA
TATATCCTCCACCCTCCTCCCCCCCCACATTTACGAACATTTTCTGGAAG
AGTCTAGTCTTTTCCTTTGTGCTAGTGCTAGTGAATCAATCTTGTGTCTT
TCAATTTTTAAATGAGGAATCTATTGTCTTGTTTTTAGTTCCAGAAAATG
AAGAAGATATGGTAAGTTTGTTATACCTTATGCATAGGTTCAGCCCCCCC
CTTATTTTTTTTTTGGGGGGGGGCTAAGAAATATTTTGGCCTTTAAAGAG
CCTGGGGGCTAAAATTACCAAAATATTTGGGGGACCTAGATTGTTGGGGG
GATCTGACTGAGACTCTGGGGGCTGTTCAGCTAAATTCAAAAGATATGTT
ATCTTACTATTAAATCAAATATAAAAAGCAAAAGACTTGTAAACGTAAAT
ATTAAAACAAGTAAAATTTAGTTTTCATTTATCAGTACTTGCATATATTT
TTTATTGACTTCTCACTACGGGGGGCGGGAGAATAATGTATTTTGTTTTT
GTTTATCTTGGGACCTGAAGTGGTAGGGACCTAGCACAATGCACTTTTTG
GGGGGGACCTTACTTTGTTGGGGGGAGCTATAAACCTGGCTGAAGCTATG
TTATGTTATTGTTATTACGCTTATATAACTAATCAAGTATATAACGCGGG
AAAAACTTTGTTAAACGGTGGTAATTAAATCAAGTGTAACCGATTCGCGT
TAATAACTTGAGTAGTTATATAATTGTAGTAAGATCAATAACTTACTTTG
ATGTTTGTGTCTCAATTTGAAAAAATCTAAATTAGAGTGCAAAAGTGTGA
GAATGTCCACTGAACCCCTATGAAATGATTTAGCAAACTGTATCCGTTAT
GGCTTGGCCAACATCAGCATTTCACTCTACAGCTGGACAATTCAAAACTT
TTGTATCTGTTTAGGATGAAGAGATTGAGGCCTTGTTAGCAGCGGACTTT
GAGATTGGTCATTTCTTCCGTGAGCGGTTCATTCCAAAAGCAGTTTTGTT
TTACACTGGTGAAGCGATCGAGGATGATAGCGATGATGAAGACTTCGAAG
ATGAAGAGGTAAAAAACGCTCATCCATTCTTTTTTCCTTGTGTCTGTGTA
CGACTGGCGAAAGAGTCGGTTTGTTCAAAGGTATTCCTTGCAGGTACCTT
TAATTTGATTTTTTTGTTAATTCTCAACTTCAGTTGAGCTAGAATCTGAC
AATGTCTGTATGTCCGTCCGAAAACTTTGGGGCAGCCTGGAGACTTCAAA
AATTGTTCGATTTGGCTGAAATTTTGCACACTTGTTCTTTGGGTGAATAT
CTGGGGTTATTTTTTTCATTTTTCAAAAATTTTGTTAATATCTTGATTAA
TTTTTAATCAATTTTCGTATATGATAAATTGTGGGAAATTAATTTTGCAG
AGCAACGTAAACAAAAACCACAAAAGGTTTTCTTTTCTCCGAAGTAATTT
ATTTTGAAAGGCTCTGAGGACACTATTCTAAAGACACTATTTTAACGTAT
ATAAAAAATGAAAAATGAAGATAAAAACAACCCCAGGTATTCACCCAAGG
AACAAGTGTACCAAATTTCAGCCAAAACGGACAAAGTTATAATATTTGCT
ACCTAATGCTAAATATTTGAAGTGTTACAATTTGGCTTTCGAATAACAAA
ATATCTGAAGTTGAGCCCAGTGCGGTGCGCACGTTCGACTATTTAGAAAA
GAAGTGGATTTATAGCCGTTTTTGCGAAATTCAGTCCACGTTGAAATTCA
TCAACTTCTTACTATTCGTCAGGATTGGCCAATAGCCAGCTAAAGATGAT
TCTCCATTAAAACAATTTTTTGACTTACCTCGGAGGTCCAATTTAATCTT
TGTTCGTCCGTACGTCCGTCCGTCCTTTTCGCGGGATTGGTCAATAATTT
TTTCTGATTTTTTGCGAAGTAATGCAAAATGACAGTACCCAAAAAGTAAC
GGAATGAGAAATTGCTTTTTTTTCGTTTCATTTTTTGCTTAAAGATAGAG
GACAAGGTTCTCTAAAAAGTGGCTAAAGCTGTTTTCTTCGGAATTTTTTT
TTGACCGTAAAAATCGGATTTTCTTTTTTGGGGACATTACTTTTTTAGGG
AAAATGAGCATTTCTATCGATTAACTTGGTATTTTTGGACCTACCTCCGG
GTGCCCCGGTGGAGGTCCTATAAATTAACCCATGTCCGTTCGTTCGTTCG
TTCGTCCGTCTGTTACCAGCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAAATTTGGGCAAAAAACAGCTAAAAAG
GTTTTTTGGGCCTGAATGGTTCAAGTAATTTTCGTATTTGGGGAAATTCC
TTTTTACCATTTTACATTATTCAACACACAAGCTTTATTTTTCCATTCTG
AATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTCATCTGATGTTAA
TCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTTCTGATTATTTGCACA
TTGATGTAAAATAGTAAATGTTTAAAATCTGATAGAGCCAGATTTTCGAA
AAAGAAATTTTTGGTAAATTTGGGTCAGAAAGTGCCTAAAAAGGGACTTA
GTGTGAAATTCCTTCTTTTACTTTTTCCTGGTTTTTTACTGTGATGCGAA
ATTGTAATTCAAGACTTTTTTAATTAATAAATGGTTTTAGCAAATTTTGG
ATTTGTGGAAGTTGCTTCATTAGATTTTATATTTAAAGAGCTAGAATTAT
CTTTATATTTGTTTGTGCCCAAAACTTTGCGTGGCTCTTTACCTCTAAAA
CATCGAAAAACCGGTGTGAAACAAGCTTCATAATGTTTTTCAAGCTTACG
TATTTCTATGATATGCTGTTATCTTTTTATCTTATTTCGTTTGAACATTT
TCATCTTCATTCAGCATGTTTCCGACTACTATATCTCAGGTAGGTCCATT
CAGCATGTTGCTTGTTGTTTTTATAGGGAGACGAAGATGACGACGACGAT
GATGATGACGATGAAAATGATCCCGACTTCAAACCCGATGTAAGTATCTC
CTCTTAAGCTTACTTCAAATTATCAAAACTAGCGACTAAAAGAGTGTCTG
TCCCGCGAATTAATTTTTCGAGAATTTTATACCCAGGACATTCTTATTCC
AACTTCTCCCCCCCCCCCCCCCGCCTTTTAAGTTTTTAGATTTTTTCCAA
CCCCCCTGCTTATTCCAAACCCCCCGGCTATTAGGTACCCGAGAGTAGAC
GTAAGCTCGTAAACGTAGATAATGGAACTGACAAACTATTTAGTGTTTTG
TGAAATACAACCTTATTCAGTCAGGGAACATCAGCAAATTAGGCTGTGTT
GGCCATTATGGCATAATTTGGGCGGATGTTACTTGTCGTCCAGATATTTA
AGTTTGTATTTTGTCAATATCCTAATTAGGCCATGAATTCACTTCTTTAT
AAGCCATTTAACCATTTTTCGGCTCAGGGCTAGAGTTGCTAAGGATTTAT
CGTTCTCGTCTTTCAGGGGGAAAAACCTCAAGAGTGCAAACAACAGTAAT
AATGGAACTCTGGTATCCCACCAAACCACCTCACGTGTGCTTACTTGAAG
TTACAAACATCTCAAGCCATCACACATCTTCAACCCAGTGCTCACACAAC
AACTTCGGCTTGACAAGTTACCCTGTTCCTGTTCAGTTCTTTTAAAGAAG
GGAGCAAGAAGCATATTTAATACTAACCAACCGATCTTGTACTATATCAA
TTAAATTTATACTCGGAGATAAATTTTGGTAATTTCTATGTAAAAAAATT
GTTTAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010380XLOC_010380Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018571-exon-sc0000301-1575043694:51603..51972TCONS_00018571-exon-sc0000301-1575043694:51603..51972Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1575043694:45987..46057TCONS_00018571-exon-sc0000301-1575043694:45987..46057Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1575043694:45076..45611TCONS_00018571-exon-sc0000301-1575043694:45076..45611Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1575043694:44194..44423TCONS_00018571-exon-sc0000301-1575043694:44194..44423Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1575043694:43263..43333TCONS_00018571-exon-sc0000301-1575043694:43263..43333Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1575043694:42469..42543TCONS_00018571-exon-sc0000301-1575043694:42469..42543Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1575043694:41912..41934TCONS_00018571-exon-sc0000301-1575043694:41912..41934Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1575043694:41015..41158TCONS_00018571-exon-sc0000301-1575043694:41015..41158Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1575043694:37484..37546TCONS_00018571-exon-sc0000301-1575043694:37484..37546Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1575043694:36715..37006TCONS_00018571-exon-sc0000301-1575043694:36715..37006Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:51603..51972TCONS_00018571-exon-sc0000301-1510915933:51603..51972Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:45987..46057TCONS_00018571-exon-sc0000301-1510915933:45987..46057Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:45076..45611TCONS_00018571-exon-sc0000301-1510915933:45076..45611Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:44194..44423TCONS_00018571-exon-sc0000301-1510915933:44194..44423Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:43263..43333TCONS_00018571-exon-sc0000301-1510915933:43263..43333Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:42469..42543TCONS_00018571-exon-sc0000301-1510915933:42469..42543Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:41912..41934TCONS_00018571-exon-sc0000301-1510915933:41912..41934Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:41015..41158TCONS_00018571-exon-sc0000301-1510915933:41015..41158Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:37484..37546TCONS_00018571-exon-sc0000301-1510915933:37484..37546Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1510915933:36715..37006TCONS_00018571-exon-sc0000301-1510915933:36715..37006Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:51603..51972TCONS_00018571-exon-sc0000301-1491911889:51603..51972Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:45987..46057TCONS_00018571-exon-sc0000301-1491911889:45987..46057Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:45076..45611TCONS_00018571-exon-sc0000301-1491911889:45076..45611Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:44194..44423TCONS_00018571-exon-sc0000301-1491911889:44194..44423Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:43263..43333TCONS_00018571-exon-sc0000301-1491911889:43263..43333Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:42469..42543TCONS_00018571-exon-sc0000301-1491911889:42469..42543Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:41912..41934TCONS_00018571-exon-sc0000301-1491911889:41912..41934Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:41015..41158TCONS_00018571-exon-sc0000301-1491911889:41015..41158Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:37484..37546TCONS_00018571-exon-sc0000301-1491911889:37484..37546Clytia hemisphaericaexon
TCONS_00018571-exon-sc0000301-1491911889:36715..37006TCONS_00018571-exon-sc0000301-1491911889:36715..37006Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000301supercontigsc0000301:36715..51972 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1078.78	1038.46	926.205	889.975	152.596	123.243	158.341	174.516	274.649	216.961	433.301	373.969	892.935	877.853	791.94	726.237	645.214	780.819	352.766	384.192	695.566	691.016	871.865	816.505	717.401	778.015	726.434	907.842	516.653	561.64
Blast
[Close]
BLAST of TCONS_00018571 vs. Swiss-Prot (Human)
Match: NP1L1 (Nucleosome assembly protein 1-like 1 OS=Homo sapiens GN=NAP1L1 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 1.623e-92
Identity = 177/341 (51.91%), Postives = 235/341 (68.91%), Query Frame = 3 
Query:  465 AELMKNPELIAAVQAKLNGLLGDSTGFIDMLPECVKRRVHALKNIQVECAKLEGKFYEEAHQLEMKYAGLFKPLYEKRSEIVNAIHEPTDEESKWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFADEVKSKLKLDMDENT------KGIPEFWLTAMKNVELLGDMIQDHDEEILKHLTDVKLIFTXXXXXXXXXXXMGFVLEFMFQPNEHFTNTALTKTYKMKSEPDADDPFSFEGPDIVSCTGCKIDWKKGMNITXXXXXXXXXXXGRGQTRVVTKTVQNDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGHFFRERFIPKAVLFYT 1469
             ++M+NP+++AA+Q +L+GL+   TG+I+ LP  VKRRV+ALKN+QV+CA++E KFYEE H LE KYA L++PL++KR EI+NAI+EPT+EE +W    E+E                               ++E+K K K++ ++        KGIPEFWLT  KNV+LL DM+Q+HDE ILKHL D+K+ F+   +       M FVLEF F+PNE+FTN  LTKTY+M+SEPD  DPFSF+GP+I+ CTGC+IDWKKG N+T K +KKKQKHKGRG  R VTKTV NDS F  F  P       D+D++ EA+LAADFEIGHF RER IP++VL++T
Sbjct:   40 VQMMQNPQILAALQERLDGLVETPTGYIESLPRVVKRRVNALKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEECEWKPDEEDE------------------------------ISEELKEKAKIEDEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQP------MSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDS-FFNFFAPPEVPESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFT 343
The following BLAST results are available for this feature:
BLAST of TCONS_00018571 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NP1L11.623e-9251.91Nucleosome assembly protein 1-like 1 OS=Homo sapie... [more]
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