TCONS_00018615 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018615
Unique NameTCONS_00018615
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1259

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018615 ID=TCONS_00018615|Name=TCONS_00018615|organism=Clytia hemisphaerica|type=transcript|length=1259bp
GAGAATTCAAAATGATGAATTACTGCATTTTGGTTTCGACCTTTTTAAGT
ATAAAAACCATTTCAAGTTCTTACATAGCATCTGAGAAAGGTTCAATCGC
taaagaaaatttatatttattaaAAGGAGTAAGCTCTCCAGTTCAATGTA
CTTTGAGATGCAATCAAAGGAAGGAAGCTGCTTTTTATGGAGCAGGCGGC
ACATGCGGATGTTTTTCAAGGGAAGATTTATCATCAGACAGTCAGACTGA
AATATCTGGATACAATCATTttgagATCAGACATACAAAAGCACTCTATA
TACCCGAAGATACACCAAGACAGAACGAATTTTCGATGGCAGAACTTGAC
TTGGTCCAATATCCTGAAGGAAAGATTGTTAACATTATACCACAAACAAC
TCACGCATTCGAACTGAATTTCAAAATCCAGTATCATCAAAAAGTTGAAC
ACCAGACGCAAGTGTTGGAGTTCACTGATGGCTACGGGGTTCATAAAGGT
CCTAAAGTCACCATGAAAGGCGATTGGATGACGTTCATTTATCGCGATCT
AAACTCTAAGAAAGTCTTACTTCAACCTGATATCACTTATAACGTCACCA
TTCGACAATATAAGACCGGAGAAGACGACAAAGGGCGATTACGTATTCTA
ATTAATAAAGTGCAAAAATTTCCATCTTTTCTTCTTGAAAATGTTCCTTG
TTATATGAACATCAAATGTCTGATTGGTGATCCATTTAAGAAGTTGCCTT
CAACTCCAGCTGTGGTGACTGATTTGAATTATACCACAACACCGGTTTAT
TTTGGCATAGGTACCCAGATTTTTCTACCGGAACATTATTCAGTTGAATC
CATTGAAAACTGGCCCCCTCCGAATTGGCAAGTCAAGTTGGGGATTAAGT
TAGTGGGAAATATTGGTTGGAGAGACGCATTTTATTTGGCAAAACCGGCA
GCAGGAGACTTTGGAGGACGAATACCAAATATTCAATTCTCTCCAACCAA
TAAAATGCACATATGGTCTCACATTGGCACTAGCACTCAAATCGTCTACG
AGCAAGTCCTTCCATTAAACCAANTGGTCTCACATTGGCACTAGCAGTCA
AATCGTCTACCAGCAAGTCCTTCCATTAAACCAATGGTTTGATatcaaaa
ttgaacaaaaattgagAGGTGGTAATTACTATGTGTTGGTTTTCAAAGAT
GGTGTTAAAGTCGCCGAGGTGTTGCACATGGGATACACTGTTATAAGTGA
GCAAGTCAA
Run BLAST on NCBI

protein sequence of TCONS_00018615-protein

>TCONS_00018615-protein ID=TCONS_00018615-protein|Name=TCONS_00018615-protein|organism=Clytia hemisphaerica|type=polypeptide|length=363bp
EFKMMNYCILVSTFLSIKTISSSYIASEKGSIAKENLYLLKGVSSPVQCT
LRCNQRKEAAFYGAGGTCGCFSREDLSSDSQTEISGYNHFEIRHTKALYI
PEDTPRQNEFSMAELDLVQYPEGKIVNIIPQTTHAFELNFKIQYHQKVEH
QTQVLEFTDGYGVHKGPKVTMKGDWMTFIYRDLNSKKVLLQPDITYNVTI
RQYKTGEDDKGRLRILINKVQKFPSFLLENVPCYMNIKCLIGDPFKKLPS
TPAVVTDLNYTTTPVYFGIGTQIFLPEHYSVESIENWPPPNWQVKLGIKL
VGNIGWRDAFYLAKPAAGDFGGRIPNIQFSPTNKMHIWSHIGTSTQIVYE
QVLPLNQXVSHWH
Run BLAST on NCBI

transcript from alignment at sc0000303:108278..124826+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018615 ID=TCONS_00018615|Name=TCONS_00018615|organism=Clytia hemisphaerica|type=transcript|length=16549bp|location=Sequence derived from alignment at sc0000303:108278..124826+ (Clytia hemisphaerica)
GAGAATTCAAAATGATGAATTACTGCATTTTGGTTTCGACCTTTTTAAGT
ATAAAAACCATTTCAAGTTCTTACATAGCATCTGAGAAAGGTTCAATCGC
taaagaaaatttatatttattaaAAGGAGTAAGCTCTCCAGTTCAATGTA
CTTTGAGATGCAATCAAAGGAAGGAAGCTGCTTTTTATGGAGCAGGCGGC
ACATGCGGATGTTTTTCAAGGGAAGATTTATCATCAGACAGTCAGACTGA
AATATCTGGATACAATCATTttgaggtttttttttttttaataaatttac
taattaaattaaatttttgtggAATGTAGAATGTCAATACCTTTTGCTGG
GAAAACTTTGAGTTTAAGTAATCTGTGTATAGCCTTACCTTTGAACTTCG
TCCCCGTGCCTAATCTCCTTTTGATTGATTAGAAGGTTAGCCCTGGACTC
GTCGATGATGTTTGCCATAAGATTGAGGATGGGTGAAGCCTTTTATTGTA
AATTGTCGCTATAGCGATTCGGCCTCCANCCATAAGATTGAGGTTGGGTG
AAGCCTTTTATTGTAAATTGTCGCTATAGCGATTCGGCCTCCAAGTATaa
tgttgattttttaataattctATAATACTATAAACAAACCGCATCATTTT
TGGAGCCTATTCATCAATATGGAAGGACTACCTTTTCGCCTGTAAAATTG
GCTACCGAATTTTTTTCTCATAGATCAGACATACAAAAGCACTCTATATA
CCCGAAGATACACCAAGACAGAACGAATTTTCGATGGCAGGTATGTATCT
ATTTAACGGCTCTATATTTAACATAAGTGTTCTCAAACACATGTTTCATG
TCAGaacagtgtctccctattgttacaTTATGCTGAATAATAGGTCCTCT
TTCTGACCattcttgctccacatccgtgtcaatccaatgtgaaaaagctt
gtatcaatcttatttaaaaacaaagcctTTAAGTTCAACAAAACTTTTTA
CCGAGCAAAAATATATGTACCTTATCAGttctttttacaccggcccttat
tgccgtttttttgggctcgtggcgtaataaaggccggcgtaaaagggcca
agattttgcaattctaacctaaaagcggcgttaattttcttttattatta
tttctcaatttaaaggactTTAGGTATGATTTGAAAACGaaaatccattg
ttttactccatatttaaaacttcagtgattttcgatggaattttcaacag
tttactactgaaaaatgatatgtaaattttagtcattatttactaatttg
aagcataagtatccatttttacaaattttgccgttattaacggccctaat
tggcgtaagccaaaattaggctgtggcgtaataagggccggcgttaaatg
ggctggcgttaaattagggccggtgCAGAAAGGGACGATAAGGTACTTCA
CGATAAGTCATGTTTTTAATATCTTTACCTTACCCCATAGAAGAAAGCTT
CTTAAAAACATTGTACAGAGCTGGAGCAGTTACTGTTTAAGTACtactca
aaaattgaaattttgtgacTGTTATTGAAAAGGCAGACCAAAATAACCCT
AAGTTTGACTAAGGACGCTGCTGTATCACAGATCTGTTGAGACCCCTGCC
CCTGTGattaatagaatttctattccgaTTGGGAATTCGAAAGAAATTct
gagggaaaaagtttttCAGGAGTGTGTCAAGGAAAACTGCCGAAAATCTA
AGATCTAGAAACGCTTTTACGTGAATATCTATCTCTCTTTAGAACTTGAC
TTGGTCCAATATCCTGAAGGAAAGATTGTTAACATTATACCACAAACAAC
TCACGCATTCGAACTGAATTTCAAAATCCAGTATCATCAAAAAGTTGAAC
ACCAGACGCAAGTGTTGGAGTTCACTGATGGCTACGGGGTTCATAAAGGT
CCTAAAGTCACCATGAAAGGCGATTGGATGACGTTCATTTATCGCGATCT
AAACTCTAAGAAAGTCTTACTTCAACCTGATATCACTTATAACGTCACCA
TTCGACAATATAAGACCGGAGAAGACGACAAAGGGCGATTACGTATTCTA
ATTAATAAAGTGCAAAAATTTCCATCTTTTCTTCTTGAAAATGTTCCTTG
TTATATGAACATCAAATGTCTGATTGGTGATCCATTTAAGAAGTTGCCTT
CAACTCCAGCTGTGGTGACTGATTTGAATTATACCACAACACCGGTTTAT
TTTGGCATAGGTAAGAAAATGTGTCAAAGTTAGATCCATAGGCGCTATGA
GAAGCCGTTGGGGGTTAGAGTCGAATCTCCTATATACGTCTCGGTTCGCG
TGTTTTTTAAACAATGAATTGGAAGTAACAGATTATGAAATATCTCCTTT
TGGGTTCCAAATTTCATCTTTCAGGAATCAGAATGGTCATACAttgatat
ctgacagggtccgtTTTTGAGATCCGACGGTCAACTCCCCCCTCCCCCTT
ATACCCGAAATTTGATATAGCCCATGGCGTTTTAAATCTATAATATAGAA
CGCCATGATATAACCCAGTcatctcaaaattttggtattttatgtTTCAT
GTTGCTTCAAGTCTTTTTACAATATTTGGAACAAAACAGGAACTCTCtca
gttttaacattagacttaagattTACCATGAGATCAAATAACATGCacca
gtggaggctaacatgcttTTCCGCATGTATTTagattctattgtctttag
gtgcgaaaaaaataCTGGGACGATTTTAGGGTGTTagaacggacaaaaaa
tgcccatCCGgtattggcggctacggtcgaaaaggtgtaacTTGCTTGAT
GTGTTTATATATCTCTCAATTTAGGTACCCAGATTTTTCTACCGGAACAT
CATACAGTTGAATCAATTGAAAACTGGCCCCCACCGAATTGGCAAGTCAA
ATTGGGGATTAAATTAGTAGGAAATGTTGGTTGGGCAGAcgctttttttt
tgtcaaaagctGACGGAAACTTTGTTGGAGGACGAATACCAAACATTCAA
TTCTCTCCAACCAATAAAATGCACATATGGTCTCACATTGGCACTAGCAG
TCAAATCGTCTACGAGCAAGNGACGAATACCAAATATTCAATTCTCTCCA
ACCAATAAAATGCACATATGGTCTCACATTGGCACTAGCACTCAAATCGT
CTACCAGCAAGTCCTTCCATTAAACCAATGGTTTGATatcaaaattgaac
aaaaattgagAGGTGGTAATTACTATGTGTTGGTTTTCAAAGATGGTGTT
AAAGTCGCCGAGGTGTTGCACATGGGATACACTGTTATAAGTGAGCAAGT
CAAAGTTTCATTTAGGAATTCACATGGGAAAATCGTGATGCGAGATTTTG
ACTATGGTATTGTATAAACAATACTTTACAGTTAGAAAGTAACACTGGAC
TTTAAATAAAACCTGGAGACagcttctcaatcccggccaaccgAAGTCTT
TAGCGTGTTTTGGTAGTGGTAGCCTAATGGTAGCACAACTCAATAGCGCT
ATTAATGAATCGAGAACGCTTTACTTATCCTCGAATAAGTATGATGATGC
AGTACCATTTGAGGTAAATTTTAACACTGTAATGGTTTCTTTAAAGGTGT
CAGAGTTTTCGAAAAAACTCCCCTTTAAAGATGACGGATATAGATTAATC
CAGGGTTTATAAAGCTCAGTAAAAGCTaacagaaaaaaagacaaaattga
tTGTGGAGCAACCAGCGCTAGGGTGAAATCGAATTATGCTAATGGACAAT
TTGGCCTGACGAGCCTTGTCGGGCAGAGAGGACGGAAATGGTCAGGAATG
TAAATATGAAATTTGACTTAAAAATTGGATATTTTAcataataaaatgaa
atgaaatttttttaactatttaaaccaaagaaaatatggctttttataat
aaagataatactagtcatagctttcactctttcactaaatgcccccacat
aaagatcatgtcatgcacttataaagctttaatgctttaagattaaacat
taaaaaataatcaggaataattgattgattNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNgtgttatatcatacactgttttgatttgcattta
taacactcgcttcagcttttcaaagctaaatcaaaactagaattgtaata
tgtagtaatgataataccatataacgtaatatgaaaatatgtagaatacc
gtcccggaaaaaaccgaacatttatggaagagactaactacggatatgct
tacgcgacaacaacaaaacaattcgcaaagttttgagattccagtccaat
atctatgcgtgaaggtatgagtgcctcctcgtcgctacgctcctgcgggg
gcaataacaATAAAGAAcggaaaaaaagtaaagaaataaaCTACAAACAA
CTTACATACTAAAAACCTATAGTATAGAAAGTATAAAGTACAAAATATAA
tttgaataaaacaaaaaataagatggacacttttctatttttgtaaGTAG
TTTTACTTGAAATTCCAGTGCATGAAATCACATTAATAACCTAAGAATAG
AGCATCTATTCTTCCAAAAGGACTGAAGTACGGACGATGGCTTCAGTGAC
GGAATACGGATCACAGTTAGATGAAGGACGTCTGTCTTCAAGGTATCCTT
TGTCATCTTCAGCGATTTGTCTTGGGATACGGATGGACGTGTTACAGCTA
GCAACGCCGTATGAGAATTCGTGCAAaattttaccaccctaaaaccatcc
cagtctttttttcgcgcctgaagacaatagaaaaaagtgtaaaaaaagga
ttggatcgagtttagggtggtaaaaaatgcttgcgcggcaattggcggct
acggtcgaaaagatgtattgagttaaaataatagacagactttatgttat
gattctctatcactgactctttttaaaaagcattgatgacttttttaagt
tgtgttttcaacgacgggaatgaaaatatcaacaatGAACTTCATcaaag
atcttggatggtcgtcatggttacttttgtcttcgttgattgcgcgctga
atagaatctcgattggtcgaTACAGGTCACTATATGATAttggcctgtgc
ttttcacggtacataAAGATATCAAATATCCAGAACAAACACTCCTCGGA
CGAAGACATGTAcattcataaaatttcaaatcgagAACTAGAGATGAATC
ATCAACCTTTCCTAAGAAAGAATAAAAGTGATGCCTTAAAACTTGATGGG
TGGATACTACTACAATAaacgccgaaatatattggcaattttgggtattt
taacgtttttcacaatttaaagGTCGGgtgagaattgcagtttcagtact
tccacttggcttcattggatttttcgatttaggAGGGGTTAAGTTGCTTC
CAGACTATACTCTCAgtcttattggaacatttttgagcttttgaatCCTG
AGATCCCAAGGTCCtgatgttaaaactcagagttaaaactgtAGTACTTC
CTaactgtacttcaaagcacttaagggctctgaccatagtcagaaagctg
aatttagtatctgaacataaaagttatgttttagattctttaacactttt
aacaaagaattgcctttataaattgctttttaatcagaCCCCTTatgagt
aattaagaacttaattgcaaaaatgatgttatgaactttaaaaagacgtt
aataatatgttgcatcaccttcttttataaaaagtgctaagttttaatgg
gtaattaacttttttgtttcgaacttttttcaaactgtctgcaaagaata
aaactatttcaaattttgcggaaaatatttttaaaaagatgtgtcaaaag
ttatgactgtttttctaagcaaaatccagatggaaaattgatgaaaaacc
actattttgaagatttcgagacaaagaagcatttacaaaaatttttattg
ttcggtaaaagatacaccatctactgcgaaaattttttcaaaatgatttt
tcttcgccgaaactaagctcttcaaagttgaaatactcttcctcgcaaaa
gtcttcattttcttcttcatcaaattttttcaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNaattttttcaatgcaatttttgaattttcagatt
caggaatagtttgtctaacagaaaatgtataacatgccatagttttgttg
gttacatcagttaGAAAacacacggcaattatgaaaaattcgctatggtc
agagcccttaaaatcaCTTACGGTTACAAAGTTTTGaaggaattcccctt
ttgtgcgcTGGTTGTAGAACactttttccaagaattttgaaaatcctttc
tctttctttttgcGTTTTATACTTTTCAAATTATGGAGGTAAATGTTACT
TCCGATCCAGCGTTTTTATGGAAACTATACAAACTGTACTGTGCAACTTC
AAAAATAAGAGGATTTCAAATCCTACATAGGAGACTCCTTTCAGCTTTCC
ATTATTCCTTTTTTTGGttgattaaatttcgcgtggaaTAATTCTCGCGA
TTTTTACGAATTTAGCTCTTCCGCGAATAAATTTACTCCtcccaaaatat
tcaaaattctgATTTTGGTCCAAAACTcgaagaaaatgaaagaaattatg
aaaaagaggctgattcATGAACTTTAAGCCCACGAAAATTATAATCTTAA
GGTAGGGTAAGGTAAAAAGCCCTGGGGTGGCAATGACCTTGACGGTCGAC
GGGGACGTTGGAGTTGACTCTGCCAGCTATGAATGTATTGTTAATTTGGA
CCCCGTCGGAActaaaaaagttcaaattttcaccctgaaacgtatcaaaa
attacgaaatatagacaaaagattgaaagaatGAATGGGGTAAGAATGAA
TTTCAAACTTATTCCTTCACACAAATTTAGACTCGATTTTTGCATGGCTT
AAATAattcattattatttttattttgtatttttctgtGGTTGAATTAAT
GAAATATGTTTTCATTGTTGTCACTGGTGTCTATTTATTCATAAATGCTT
CGACGAAAGTTTTTCTCACGAATTCATGACGGACGGGAAGAGTCGGTTCA
TtttggaaaattcaaaatgatgaATTACTGCATTTTGGTTTCGACTTTTT
TAAGTATAAAAACCATTTCAAGTTCTTACATAGCATCTGAGAAAGGTTCA
ATCGCTAAAGAAAACTTATATTTATTAAAAGGAGTAAGCTCTCCAGTTCA
ATGCACTTTGAGATGCAATCAAAAGAACGAAGCTGCTTTTTATGGAGCAG
ACGGCATATGTGGATGTTTTTCAAGGGAAGATTTATCATCAGACAGTCAG
ACTGAAATATCTGGATACAATTATTTTGAGGttcgttttttaaaaataaa
tttactgATTAAAACGTCAACGTCAAATTTTTGTGGAATGTCAATGCCTT
TTGCAGGGAAAACTTTGAGTTTAAGTAATCCGGGTGTAGTCTTACCTTTG
AACCTCGTCCCCATGCCTAATCTCGTTTTGATTGATTAGAAGGTTATCCC
TGGACTCGTCGATGATGTTTTCCATAAGATTGAGGATGGGTGATGCCTTT
TATTATAAATTGTCGCTATAGCGATTCGGCCTCCAAGTAGAATGTTGATT
TTATAATAAGTTCATAATACTATAAACAAACCCCATCTTTTTTGGAGCCT
ATTCATCAATATGGAAGGACTACCTTTTCGCCTTTAAAATTGGCTACCCA
ATTTTTTTCTCATAGATCAAACATACAAAAGCACTCTATATACCCAAAGA
TACACCAAGACGGAACGAATTTTCGATGGCAGGTATGTATCTATTTAATG
GCTCTATATTTTACATAAGTGCTCTCAAACACATGTTTCATGTCAGAACa
ttgtctccctattgttatattatgctgaatAATAGGTCCTTTTTCTGACC
attcttgctccacatccgcgtcaatccaatgtgaaaaagcttgtatcaat
cttatttaaaaacaaagcctttaagtttaacaaaactttttacCGAGCAA
AAATATATGTACCTTATCGGTTccttttacaccggcccttattggcgtta
tttttgggctcgtggtgtaataagggccggcgtaaaagggccaagatttt
gcaattCTAACCTAAAAGCGGCGTNagggccggcgtaaaagggccaagat
tttgcaattttaacctaaaagcggcgttaatttttattattattatttct
caatttaaaggactttaggtatgattcgaaaacgaaaatccattgtttta
ctcaatatttaaaacttcagtgattttggatggaattttcaacagtttac
tactgaaaaatgatattttaatctaaattttagtcattatttactaattt
gaagcataagtatccatttttacaaatttaggcgttattaacggccctaa
ttggcgtaagccaaaattaggctgtggcgtaataagggccggcgttaaat
gggccggcgttaaattagggccggtgtagaaagggccgataaggtactta
ACGATAAGTCATGTTTTTTATATCTTTACCTCACCCCATAGAGTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNaagtgtcaatatttgcaattata
atctttttcccgctcaaaataattcttgagaaaaacatgtatgtggattt
gtgtattgaaagtttttcatttgagttaattttgttttgagagttgNtgt
tgcttgataaatttttttctcgctccgcaagtttctgcgtagctagcccc
tgtatctataaggctggaacaccggattcttccagtcgtttatacaaact
aaatcccgtattattattatttttattattattatttttgttattagtat
tacacgcattataaacgactccagtctaccaaTAGAGGAAAAGCCTCTTA
AAAACATTGTACAGAGCTGGAGCAGTTACTGTTTAAGTACtactcaaaaa
ttgaaattttgtgacTGTTATTGAAAAGGCAGACCAAAATAACCCTAAGT
TTGACTAAGGAAACCGCTGTATCACAGATCTGTTGAGACCCTTGCCCCTG
TGATTAATAGAATTTCCATCCCGATTGGGAATTCGAAAGAAAttctgagg
aaaaaagttccatcggGGCTCCGAGACAGGAGTGTGTCAAGGAAACTGCC
GAAAATCTAAGATCTAGAAACCaacctcgcgagccagggcgaATCGTTGG
TGGTCAGGCGGCAAAAGTGAGGGCGGGGATGGCCAGACGATTACGATAAG
CGCCCATCTATAACGTCAAAAAGCTTATCGCCCTGCGTACGAGGTTGATC
TAGAAACCCTTTTACGTGAATATCTATCTCTCTTTAGAACTTGACTTGGT
ACAATATCCTGAAGGAAAGATTGTTAACATTATCCCACAGACAACTCACG
CATTCgaactgaattttaaaatccAGTATCATCAAAAAGTTGAACACCAG
ACGCAAGTGTTGGAGTTCACTGATGGCTACGGGGTTCATAAAGGTCCTCA
AATCACCATGAAAGGCGATTGGATAACGTTCAATTATCGCGATCTAAACT
CTAAGAAAGTTTTACTTCAACCTGATACCACTTATAACGTCACCATTCGA
CAATATAAGACTGGTGAAGGTGAGAAAGGGCGATTACGTATTCTAATCAA
TAAAGTCCAAAAATTTCCATCTTTTCCTCTTGGAAATGTTCCTCGTTATA
TGAACATCAAATGTCTGATTGGTGATCCATTTAAGAAGTTGCCTTCAACT
CCAGCTGTGGTGACTGATTTGAATTATACTACAACACCGGTTTATTTTGG
CATAGGTAAGAAAATGTGTTAAAGTTAGATCCATGGGCGCTACTTGCTAC
TAAATATAATGGGATAAAGCCGTTGGGGTTAGAGTAGAATCTCCTATGTA
AGTCTCGTTTCGCGTGGTTTGTAAAGNTTCCAAGAAATAAGTTAGCAATT
CAAATGCATTTCAAAAACACTTGGTTTGTAAAGAATAAATTGGAAGTAAC
attttcagattatgaaatatCTCTATTTGGGTTCCAAATTTCATCTTTCA
AGAATCAGAATAGTCATACAttgatatctgacagggtccgtTTTTGAGCT
CCGACGGTCAACCCCCTCCCCCTATACCTGAAATTTGACATAgcccatgg
cgttctaaatctagaaTTTAGAACGTCATGATATAGCNTACATTGATATC
TGACAAGGTTCGTTTTTGAGCTCCGACGGTCAACCCCCTCCCCCTATACC
TGAAATTTGACATAgcccatggcgttctaaatctagaatttagaacgcca
tgataTAGCCCAGTCATCATGTTGATTCAAGTCTTTTTacaatatttggc
acaaaacaGGAACTCCCtcagttttaacattagacttaagattTACCATG
AGATCaaataacttgcatcagtggaggctaacatgcatttCCGCATGTAt
ttagattctattgtctttaggtgagAAAAAatgactgggacggttttagg
gtggtagaACTAAAAACATGCCCACCCAgtaattggtggctacggtcgaa
aaggtgtattcagtGACTTGCTTGATGTGTTTATATATCTCTCCATTTAG
GTACCCAGATTTTTCTACCGGAACATTATTCAGTTGAATCCATTGAAAAC
TGGCCCCCTCCGAATTGGCAAGTCAAGTTGGGGATTAAGTTAGTGGGAAA
TATTGGTTGGAGAGACGCATTTTATTTGGCAAAACCGGCAGCAGGAGACT
TTGGAGGACGAATACCAAATATTCAATTCTCTCCAACCAATAAAATGCAC
ATATGGTCTCACATTGGCACTAGCACTCAAATCGTCTACGAGCAAGTCCT
TCCATTAAACCAANTGGTCTCACATTGGCACTAGCAGTCAAATCGTCTAC
CAGCAAGTCCTTCCATTAAACCAATGGTTTGATatcaaaattgaacaaaa
attgagAGGTGGTAATTACTATGTGTTGGTTTTCAAAGATGGTGTTAAAG
TCGCCGAGGTGTTGCACATGGGATACACTGTTATAAGTGAGCAAGTCAA

Coding sequence (CDS) from alignment at sc0000303:108278..124826+

>TCONS_00018615 ID=TCONS_00018615|Name=TCONS_00018615|organism=Clytia hemisphaerica|type=CDS|length=5460bp|location=Sequence derived from alignment at sc0000303:108278..124826+ (Clytia hemisphaerica)
GAATTCAAAATGATGAATTACTGCATTTTGGTTTCGACCTTTTTAAGTAT
AAAAACCATTTCAAGTTCTTACATAGCATCTGAGAAAGGTTCAATCGCta
aagaaaatttatatttattaaAAGGAGTAAGCTCTCCAGTTCAATGTACT
TTGAGATGCAATCAAAGGAAGGAAGCTGCTTTTTATGGAGCAGGCGGCAC
ATGCGGATGTTTTTCAAGGGAAGATTTATCATCAGACAGTCAGACTGAAA
TATCTGGATACAATCATTttgagATCAGACATACAAAAGCACTCTATATA
CCCGAAGATACACCAAGACAGAACGAATTTTCGATGGCAGAACTTGACTT
GGTCCAATATCCTGAAGGAAAGATTGTTAACATTATACCACAAACAACTC
ACGCATTCGAACTGAATTTCAAAATCCAGTATCATCAAAAAGTTGAACAC
CAGACGCAAGTGTTGGAGTTCACTGATGGCTACGGGGTTCATAAAGGTCC
TAAAGTCACCATGAAAGGCGATTGGATGACGTTCATTTATCGCGATCTAA
ACTCTAAGAAAGTCTTACTTCAACCTGATATCACTTATAACGTCACCATT
CGACAATATAAGACCGGAGAAGACGACAAAGGGCGATTACGTATTCTAAT
TAATAAAGTGCAAAAATTTCCATCTTTTCTTCTTGAAAATGTTCCTTGTT
ATATGAACATCAAATGTCTGATTGGTGATCCATTTAAGAAGTTGCCTTCA
ACTCCAGCTGTGGTGACTGATTTGAATTATACCACAACACCGGTTTATTT
TGGCATAGGTACCCAGATTTTTCTACCGGAACATTATTCAGTTGAATCCA
TTGAAAACTGGCCCCCTCCGAATTGGCAAGTCAAGTTGGGGATTAAGTTA
GTGGGAAATATTGGTTGGAGAGACGCATTTTATTTGGCAAAACCGGCAGC
AGGAGACTTTGGAGGACGAATACCAAATATTCAATTCTCTCCAACCAATA
AAATGCACATATGGTCTCACATTGGCACTAGCACTCAAATCGTCTACGAG
CAAGTCCTTCCATTAAACCAANTGGTCTCACATTGGCACTAGGAATTCAA
AATGATGAATTACTGCATTTTGGTTTCGACCTTTTTAAGTATAAAAACCA
TTTCAAGTTCTTACATAGCATCTGAGAAAGGTTCAATCGCtaaagaaaat
ttatatttattaaAAGGAGTAAGCTCTCCAGTTCAATGTACTTTGAGATG
CAATCAAAGGAAGGAAGCTGCTTTTTATGGAGCAGGCGGCACATGCGGAT
GTTTTTCAAGGGAAGATTTATCATCAGACAGTCAGACTGAAATATCTGGA
TACAATCATTttgagATCAGACATACAAAAGCACTCTATATACCCGAAGA
TACACCAAGACAGAACGAATTTTCGATGGCAGAACTTGACTTGGTCCAAT
ATCCTGAAGGAAAGATTGTTAACATTATACCACAAACAACTCACGCATTC
GAACTGAATTTCAAAATCCAGTATCATCAAAAAGTTGAACACCAGACGCA
AGTGTTGGAGTTCACTGATGGCTACGGGGTTCATAAAGGTCCTAAAGTCA
CCATGAAAGGCGATTGGATGACGTTCATTTATCGCGATCTAAACTCTAAG
AAAGTCTTACTTCAACCTGATATCACTTATAACGTCACCATTCGACAATA
TAAGACCGGAGAAGACGACAAAGGGCGATTACGTATTCTAATTAATAAAG
TGCAAAAATTTCCATCTTTTCTTCTTGAAAATGTTCCTTGTTATATGAAC
ATCAAATGTCTGATTGGTGATCCATTTAAGAAGTTGCCTTCAACTCCAGC
TGTGGTGACTGATTTGAATTATACCACAACACCGGTTTATTTTGGCATAG
GTACCCAGATTTTTCTACCGGAACATTATTCAGTTGAATCCATTGAAAAC
TGGCCCCCTCCGAATTGGCAAGTCAAGTTGGGGATTAAGTTAGTGGGAAA
TATTGGTTGGAGAGACGCATTTTATTTGGCAAAACCGGCAGCAGGAGACT
TTGGAGGACGAATACCAAATATTCAATTCTCTCCAACCAATAAAATGCAC
ATATGGTCTCACATTGGCACTAGCACTCAAATCGTCTACGAGCAAGTCCT
TCCATTAAACCAANTGGTCTCACATTGGCACTAGGAATTCAAAATGATGA
ATTACTGCATTTTGGTTTCGACCTTTTTAAGTATAAAAACCATTTCAAGT
TCTTACATAGCATCTGAGAAAGGTTCAATCGCtaaagaaaatttatattt
attaaAAGGAGTAAGCTCTCCAGTTCAATGTACTTTGAGATGCAATCAAA
GGAAGGAAGCTGCTTTTTATGGAGCAGGCGGCACATGCGGATGTTTTTCA
AGGGAAGATTTATCATCAGACAGTCAGACTGAAATATCTGGATACAATCA
TTttgagATCAGACATACAAAAGCACTCTATATACCCGAAGATACACCAA
GACAGAACGAATTTTCGATGGCAGAACTTGACTTGGTCCAATATCCTGAA
GGAAAGATTGTTAACATTATACCACAAACAACTCACGCATTCGAACTGAA
TTTCAAAATCCAGTATCATCAAAAAGTTGAACACCAGACGCAAGTGTTGG
AGTTCACTGATGGCTACGGGGTTCATAAAGGTCCTAAAGTCACCATGAAA
GGCGATTGGATGACGTTCATTTATCGCGATCTAAACTCTAAGAAAGTCTT
ACTTCAACCTGATATCACTTATAACGTCACCATTCGACAATATAAGACCG
GAGAAGACGACAAAGGGCGATTACGTATTCTAATTAATAAAGTGCAAAAA
TTTCCATCTTTTCTTCTTGAAAATGTTCCTTGTTATATGAACATCAAATG
TCTGATTGGTGATCCATTTAAGAAGTTGCCTTCAACTCCAGCTGTGGTGA
CTGATTTGAATTATACCACAACACCGGTTTATTTTGGCATAGGTACCCAG
ATTTTTCTACCGGAACATTATTCAGTTGAATCCATTGAAAACTGGCCCCC
TCCGAATTGGCAAGTCAAGTTGGGGATTAAGTTAGTGGGAAATATTGGTT
GGAGAGACGCATTTTATTTGGCAAAACCGGCAGCAGGAGACTTTGGAGGA
CGAATACCAAATATTCAATTCTCTCCAACCAATAAAATGCACATATGGTC
TCACATTGGCACTAGCACTCAAATCGTCTACGAGCAAGTCCTTCCATTAA
ACCAANTGGTCTCACATTGGCACTAGGAATTCAAAATGATGAATTACTGC
ATTTTGGTTTCGACCTTTTTAAGTATAAAAACCATTTCAAGTTCTTACAT
AGCATCTGAGAAAGGTTCAATCGCtaaagaaaatttatatttattaaAAG
GAGTAAGCTCTCCAGTTCAATGTACTTTGAGATGCAATCAAAGGAAGGAA
GCTGCTTTTTATGGAGCAGGCGGCACATGCGGATGTTTTTCAAGGGAAGA
TTTATCATCAGACAGTCAGACTGAAATATCTGGATACAATCATTttgagA
TCAGACATACAAAAGCACTCTATATACCCGAAGATACACCAAGACAGAAC
GAATTTTCGATGGCAGAACTTGACTTGGTCCAATATCCTGAAGGAAAGAT
TGTTAACATTATACCACAAACAACTCACGCATTCGAACTGAATTTCAAAA
TCCAGTATCATCAAAAAGTTGAACACCAGACGCAAGTGTTGGAGTTCACT
GATGGCTACGGGGTTCATAAAGGTCCTAAAGTCACCATGAAAGGCGATTG
GATGACGTTCATTTATCGCGATCTAAACTCTAAGAAAGTCTTACTTCAAC
CTGATATCACTTATAACGTCACCATTCGACAATATAAGACCGGAGAAGAC
GACAAAGGGCGATTACGTATTCTAATTAATAAAGTGCAAAAATTTCCATC
TTTTCTTCTTGAAAATGTTCCTTGTTATATGAACATCAAATGTCTGATTG
GTGATCCATTTAAGAAGTTGCCTTCAACTCCAGCTGTGGTGACTGATTTG
AATTATACCACAACACCGGTTTATTTTGGCATAGGTACCCAGATTTTTCT
ACCGGAACATTATTCAGTTGAATCCATTGAAAACTGGCCCCCTCCGAATT
GGCAAGTCAAGTTGGGGATTAAGTTAGTGGGAAATATTGGTTGGAGAGAC
GCATTTTATTTGGCAAAACCGGCAGCAGGAGACTTTGGAGGACGAATACC
AAATATTCAATTCTCTCCAACCAATAAAATGCACATATGGTCTCACATTG
GCACTAGCACTCAAATCGTCTACGAGCAAGTCCTTCCATTAAACCAANTG
GTCTCACATTGGCACTAGGAATTCAAAATGATGAATTACTGCATTTTGGT
TTCGACCTTTTTAAGTATAAAAACCATTTCAAGTTCTTACATAGCATCTG
AGAAAGGTTCAATCGCtaaagaaaatttatatttattaaAAGGAGTAAGC
TCTCCAGTTCAATGTACTTTGAGATGCAATCAAAGGAAGGAAGCTGCTTT
TTATGGAGCAGGCGGCACATGCGGATGTTTTTCAAGGGAAGATTTATCAT
CAGACAGTCAGACTGAAATATCTGGATACAATCATTttgagATCAGACAT
ACAAAAGCACTCTATATACCCGAAGATACACCAAGACAGAACGAATTTTC
GATGGCAGAACTTGACTTGGTCCAATATCCTGAAGGAAAGATTGTTAACA
TTATACCACAAACAACTCACGCATTCGAACTGAATTTCAAAATCCAGTAT
CATCAAAAAGTTGAACACCAGACGCAAGTGTTGGAGTTCACTGATGGCTA
CGGGGTTCATAAAGGTCCTAAAGTCACCATGAAAGGCGATTGGATGACGT
TCATTTATCGCGATCTAAACTCTAAGAAAGTCTTACTTCAACCTGATATC
ACTTATAACGTCACCATTCGACAATATAAGACCGGAGAAGACGACAAAGG
GCGATTACGTATTCTAATTAATAAAGTGCAAAAATTTCCATCTTTTCTTC
TTGAAAATGTTCCTTGTTATATGAACATCAAATGTCTGATTGGTGATCCA
TTTAAGAAGTTGCCTTCAACTCCAGCTGTGGTGACTGATTTGAATTATAC
CACAACACCGGTTTATTTTGGCATAGGTACCCAGATTTTTCTACCGGAAC
ATTATTCAGTTGAATCCATTGAAAACTGGCCCCCTCCGAATTGGCAAGTC
AAGTTGGGGATTAAGTTAGTGGGAAATATTGGTTGGAGAGACGCATTTTA
TTTGGCAAAACCGGCAGCAGGAGACTTTGGAGGACGAATACCAAATATTC
AATTCTCTCCAACCAATAAAATGCACATATGGTCTCACATTGGCACTAGC
ACTCAAATCGTCTACGAGCAAGTCCTTCCATTAAACCAANTGGTCTCACA
TTGGCACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010407XLOC_010407Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018615-exon-sc0000303-1491911889:108278..108552TCONS_00018615-exon-sc0000303-1491911889:108278..108552Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1510915933:108278..108552TCONS_00018615-exon-sc0000303-1510915933:108278..108552Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1575043694:108278..108552TCONS_00018615-exon-sc0000303-1575043694:108278..108552Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1491911889:109001..109067TCONS_00018615-exon-sc0000303-1491911889:109001..109067Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1510915933:109001..109067TCONS_00018615-exon-sc0000303-1510915933:109001..109067Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1575043694:109001..109067TCONS_00018615-exon-sc0000303-1575043694:109001..109067Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1491911889:110070..110537TCONS_00018615-exon-sc0000303-1491911889:110070..110537Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1510915933:110070..110537TCONS_00018615-exon-sc0000303-1510915933:110070..110537Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1575043694:110070..110537TCONS_00018615-exon-sc0000303-1575043694:110070..110537Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1491911889:111152..111175TCONS_00018615-exon-sc0000303-1491911889:111152..111175Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1510915933:111152..111175TCONS_00018615-exon-sc0000303-1510915933:111152..111175Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1575043694:111152..111175TCONS_00018615-exon-sc0000303-1575043694:111152..111175Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1491911889:124402..124826TCONS_00018615-exon-sc0000303-1491911889:124402..124826Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1510915933:124402..124826TCONS_00018615-exon-sc0000303-1510915933:124402..124826Clytia hemisphaericaexon
TCONS_00018615-exon-sc0000303-1575043694:124402..124826TCONS_00018615-exon-sc0000303-1575043694:124402..124826Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018615-proteinTCONS_00018615-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000303supercontigsc0000303:108278..124826 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0.0677934	0	0.500758	0.166325	0	0.0251797	0.0203101	0.597756	0.0474073	0	0	0.012113	0	0.00998161	0.546459	0	0	0.0375024	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018615 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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