TCONS_00018658 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018658
Unique NameTCONS_00018658
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length137

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018658 ID=TCONS_00018658|Name=TCONS_00018658|organism=Clytia hemisphaerica|type=transcript|length=137bp
AAGCACCTTGTGTTTCTTCATCATAAAGCCAAAGAAACTCTAAATTCGTG
CCAGTCTGAGATACAATCCATATGTTCAGGATTAGCCGTGGTGGTAAATG
AAGAAACAATCCAAACGTGGAAAGTTGAAGAAGACAA
Run BLAST on NCBI

transcript from alignment at sc0000304:27492..27978+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018658 ID=TCONS_00018658|Name=TCONS_00018658|organism=Clytia hemisphaerica|type=transcript|length=487bp|location=Sequence derived from alignment at sc0000304:27492..27978+ (Clytia hemisphaerica)
AAGCACCTTGTGTTTCTTCATCATAAAGCCAAAGAAACTCTAAATTCGTG
CCAGTCTGAGATACAATCCATATGTTCAGGATTAGCCGGTAAGTGacctt
tttcaaattcattatCGATTGTttattaaagatattttttttctgatata
gACAAAGCAtaattaacaaaagaatttatcaaaatttgtgCTCCCACGGG
AAGGAaaagttgttctttcttttgtttaaaagtgcTGTGTACGCAAATGA
TAGAAGATACGTTAAATGATTTCCAAGAAAAACTAtaacgaaaaataatt
tttagggCATCTTAGAAAGCTTTTgtcaatgttttttctttgaaNAAATA
ATTTTTAGGGCATCTTAGAAAGCTTTTgtcgatgttttttctttgaaCAT
TTCCTCTTGGCCATTTACCATGTTTCTTCTTTTCTCAGTGGTGGTAAATG
AAGAAACAATCCAAACGTGGAAAGTTGAAGAAGACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010437XLOC_010437Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018658-exon-sc0000304-1491911889:27492..27579TCONS_00018658-exon-sc0000304-1491911889:27492..27579Clytia hemisphaericaexon
TCONS_00018658-exon-sc0000304-1510915933:27492..27579TCONS_00018658-exon-sc0000304-1510915933:27492..27579Clytia hemisphaericaexon
TCONS_00018658-exon-sc0000304-1575043694:27492..27579TCONS_00018658-exon-sc0000304-1575043694:27492..27579Clytia hemisphaericaexon
TCONS_00018658-exon-sc0000304-1491911889:27930..27978TCONS_00018658-exon-sc0000304-1491911889:27930..27978Clytia hemisphaericaexon
TCONS_00018658-exon-sc0000304-1510915933:27930..27978TCONS_00018658-exon-sc0000304-1510915933:27930..27978Clytia hemisphaericaexon
TCONS_00018658-exon-sc0000304-1575043694:27930..27978TCONS_00018658-exon-sc0000304-1575043694:27930..27978Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000304supercontigsc0000304:27492..27978 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018658 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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