TCONS_00018677 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018677
Unique NameTCONS_00018677
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1420

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018677 ID=TCONS_00018677|Name=TCONS_00018677|organism=Clytia hemisphaerica|type=transcript|length=1420bp
GTACACAGTCCAACAACAAGAGGATGGCAATCATTGAGATTTTGTGAATA
TCCTCAAGAAATTATCTTCTCTTTGAAAGAACAATGTAAAATCACAAAGA
TTCAAGTCTTATCACACCAGCATAATATAGGATCAAAGATTGAATTTTTC
ATTGGTGAATCCAAAGAACAATCGTTAAGAAGCTGCTCATTCTCAAGACT
TGGGTATGTGCAATTAGCACCGAATGCAGAAGCCAATTATCAGGCTCGCG
AATTGAAGTCGGTGACCCTGAACAAGGATGGAATATTTGTTAAGATACTG
GTCCATCGCAACCATATCAATAAACTCAACGTTTATAATCAGGTAGGCTT
GGTAGCTGTCAACATTCTAGGATACCAACTTTCAAAGGAATTTGAAGGGC
AACACCCGCAAGAGAAAACAGAAGATGTTGtgaatttttacatgaatcaA
GTGACATCAGAAGATGAAGTGGTCAATACCTCCAAACTTAATGCCTCTCC
TCGGTATGAGTATGGTAAAGAAATCTCCCCTTATGATGACCTGGCCTTCG
ACATGTACCAGGACTCAGAAACTGCCCAACTCATCAGAAAACTCGATGAA
AAGAAACATCAAGCCATCATTGagGAAAGATATGATTATGCTAAGAAGTT
GAAAGAAGCTATTTCTGATTTAcacaagGTTGGTCAAAAACTTGGCAAAT
TTGAAGTTGAGAAGAGGAGAGCTGTCGAGCTCGAAGATTTTGATACTGCA
AAGAAGAAAAAGCTTCAAAGTGACGAGTACCGTGTCCACGTGTACAAACA
GTTGGATATCCGTGATCTGTTACAAATCCCTAAATTCGAGAAGGACCACG
TCCTACAAAACATTACAAATGTTCCAAAGCAACCATCAACTGTTCAAACT
TTGTCTCCTAAGATTGATTCATCCATAACTACAAATACCAAGAGTGAGCC
AGAGGAGGTACGTTTGCCACCAATCAACACCAGTAGCACCATCAATAACA
TCAACCACCATAGCCTCCACCACACCTCCACAACAACCGCCCGATCACCA
AGACAACAGGTGGAAGAGAACATGTCGAGTGTGGAAGCAATGCCTGAGAT
TAATGTTTCTGCCACTTATGATATTGATGAATGTCTGTCGCAGTCGCAAA
ACAAGAATGACGAGCGACCGTTACCATCACTGAACAACAGGAAATCTCAA
GGTGTGATTGAGGagcaagaaaatgaaaatgatactCACAATGAGACAGG
TTTACGCACTTTAAGTTTATCGTTCCTTATTATGTTATACAAAGGTAAAG
ATCTTTCGACCTATTTAAACACAAGGAAAAATTGTTAATACACCCTTACC
ATTACCATTATTAGAGCATTATTGTATCGTTATTACACCCCTTACCACGA
GTTTTATTACATTGAAAAAC
Run BLAST on NCBI

transcript from alignment at sc0000304:166458..175722-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018677 ID=TCONS_00018677|Name=TCONS_00018677|organism=Clytia hemisphaerica|type=transcript|length=9265bp|location=Sequence derived from alignment at sc0000304:166458..175722- (Clytia hemisphaerica)
GTACACATCAATTTGATCCCTCCCTTATCGGCGATCCAAAAAATATCAGC
AATCTGATTGGTCAAAAAGAGTACAATATATCTTGTATTTTACATGTAAA
AATATAAATTGACGAAAAGATGTTGTTGCATNTATAATATCTTGTATTTT
ACATGTAAAAATATAAATTGACGAAAAGATGTTGTTGCATTGTAGCGGTA
GCAGCAATCTAACGTCACTTTGCTACAAAACTGCCTTGTGCTTTTTTCCA
ACAAAAAAAGTGCATTTTTTGGTCACCGATAAACTAATTATCAGACGCAA
GCTAGTGTACAATACAGAAATATCTTACTCGTTCCAATTTTTTTTACATA
TTTTGCAAAAAAATCTCGGAACTCATAAAATATTTCTTGTATTGTACTCG
CAACTGTCTGATAACTATTACATATGATAAGAATTCATTTTCTATCATAA
AATCCAATCTTATCAGAAGACCTTGAATTTTTAACCAAGGCTATGTTCTT
GAGAGATTGGTTATACTTCATTAAAGCAAGTGTTTATTTCATAAAGTAAA
ACGCATACTTTCATAGTTTTATCTCTCTCATTTTGGATTTCTCCCTTTTA
GGTTCACAGTCCAACAACAAGAGGATGGCAATCATTGAGATTTTGTGAAT
ATCCTCAAGAAATTATCTTCTCTTTGAAAGAACAATGTAAAATCACAAAG
ATTCAAGTCTTATCACACCAGCATAATATAGGTTTGAATAATATAAAGCA
TTGATATATTACCTTTTTTTTCAAGAATTTCTACGTTCAGAAATTTTTTC
GTATCAAAAGAACACTGTATACCTAAAATAGAAATTCTGTAATTGTTCGT
CCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTCTGTTACCAACTTTTCTCAGGAGCCAAA
ATGTGACGGAGCCCGATTTTGGAAAAAAAAAATTTTTGGGCCAATTTGGG
CCAAAAAACGGCTAAAAAACGGGTTTTTTAGACTTTGTGAAACATTGCAT
CATTGTTTTTTTCTGATTTTTTACATGAAAGTAGGTAAAAGATGGCTCAA
GCAGATTTTTGCAAAAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCT
ATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACT
CAATTTTTTTATGAGATAGATATCTTTTTTTACTCATAAGGGCTTACTTT
TAGAGAGTATATGTGTTTTGACATGAAATTTTGGTTGCTTAGCGTGTTTT
TATAGAAAAACTGGCCAAATTCAATATTTTTTTATAAGCACATTATCAAT
TACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTCATTCTCTATGATT
TTTTGCACAAAGATGCATAACTTTAAACCCTTAAATCTGACGGAGCCCGA
TTTTCGAAAAAAAATGTTTTTGGGCAAATTTGGGCCAAAAAACGGCTAAA
AAAAGGGTTTTTTGGACTTTGTGAAACATTGCATCATTGTTTTTTTCTGA
TTTTTTACATGAAAGTAGGTAAAAGATGGCTCAAGCAGATTTTTGCAAAA
AAATTTTGTTGGCTCAAAAAACGCATGTTTATCTANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGGAACTATTCAAAAATC
GCCGAAACAACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCG
AGCTGTACTTTATATTTTTTAATGAAATTTTGCACACTGATTCAAAATGA
TAATACCTAAAATGTGACGGGGCCCGATTTTCGAAAAACATTTTTTTCCG
GCCGAAAATGCCGGAAATATCCCGAAAAACTGTTTATTTGGGCATTTTCT
CGAGATTTTATCATTAGTTTTTTCTGATTTTTTGCTCAAAGATGCGTATT
AACAATGCCCAAAATATGGCCGAGTCCGATTTTTAAGAAAAAGATTTTTC
CGACCGAAATGCCGGAAATCGCCATTTTTCTGGATTTTCATTGGACTTTT
TACTTACAATTGGTTGTTTTTCCATTCAAAAACATTATCAATAGCAATGC
CCACCATTAAGTATGTTTCAATTTTCAATAACATTGATTTTTGAAGCCGG
AACTATTCAAAAATCGCCGGAAGAACCTGATTTCGCCGGAAGGACAGTAT
TTCTTGAATTTTTCGAGCTGTACTTTATACTTTTTTATGAAATTTTGCAC
ACTGATGCAAAATGACAATACCTAAAATGTGACGAAGCCCGATTTTCGAA
AAACATTTTTTTCCGGCCGAAAATGCCGGAAAACCGGTTTTTGACATTTT
CTCAAACTTTCATCATTATTTTTCTCTGATTTTTTGCAGAATGATGCGTA
TTCGCAATGCTCAAAAAATGACCGAGCTGGAAATTTCCGTTTTTGTAGAT
TTTTTGTTGGATTTTTTCGTTTTATGTCTTTGTTTTTTTCAAACAAAAAC
ATTATTTATAAGAATGTCCACGATTAAGCATGGTTCAATTTTCAATAAAA
CTGATTTTGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTTTATATTTTGACCAGTTATGTCCTATGTG
TTTCATTGTTTCAATGTTCATTGATTAGTTTGATAACCAGGTAGGTCCAT
AAAAGTATCACTTGTTTTATGAGATAGATATCTTTTTTTACTCATAAGGG
CTTACTTTTAGAGAGGATGTGTGTTTTGACATGAAATTTTGGTTGCTTAG
CGTGTTTTTATAGAAAAACTGACCAAATTAGGTTTGAATAATATAAAGCA
TTGATATATTACCTTTTTTTTCAAGAATTTCTACGTTCAGAAATTTTTTC
GTTCAAAAGAACACTGTATACCTAAAATAGAAATTTTCGCCTCCCTGGCT
CCGAATCTTTATATTTTTAATCTTTCTTTCTAATGATATTTTAAGGATCA
AAGATTGAATTTTTCATTGGTGAATCCAAAGAACAATCGTTAAGAAGCTG
CTCATTCTCAAGACTTGGGTATCAAAACTTTTCTTTCTCATTCTCTCTCC
ATACAGTTGACTCATCATATTAACNAGACTTGGGTATCAAAACTTTTCTT
TTTAATTCTCCATACAGTGTTGAGACATCTTCTTGATTTGATATTTTTAG
ATTTTCCTTTAATATTGTCGCTGGAAAATAAAAAAGCCTTATGTCCATTT
TTGGTGTTTTGAGAAAATTGCAATCAAAGTATTTCTATACCAATGCCCTA
AAGTATTGCAATGATTAAAGTTGCTTGCTAACTTTTTTAAAGCTTCATCC
TTTTGTTTGTTAAGCTTATTATTTTTGACGTAGAAAGACACATTTTATCC
TCTAAAATAGCCAACCAAGGTCTTTGAGATCGTTTCAAGTTTAAAAAATA
TTGAACAATTAATGTAAAAAAGATGGACAATAGCTTAGACCTAAAGCTAT
CTATTCCAAAATTCTACTTTTGTTAACTTTAATTTCAAGCAACGAATGAT
GATTGGTTATGATGCATTGCAGTAACCTCTAGAATATCTTGAGCAAAGCT
TATCTGCTCTTTACCTTTTAATTCATTCTGTACTATAGATTTCATGTTTT
CATTTTCCATCCAAGGTATGTGCAATTAGCACCGAATGCAGAAGCCAATT
ATCAGGTAAATATATTCATTTCTTTCCGAGACATTTGATTTCCATAAAGA
TATATGAAAATTATAATTTATAGTGTATTCTCCTTAACAGAAATCGAAAT
TTGTTTATTTACAACACCTGAAGACGACAAGAACTTTATTTGAGTTAAGG
GAACAGTCGAGTTATAGAGGTTCGAGTTATGGAGACACTACTGTAATAAG
GAACATAAAATGTAACTGTAATGTAACTTCCATTTCCTTTCCATAAATGT
AACTGTAATGTAACTTCCCTTTCTTCTTTCCATTGAAAGGCTCGCGAATT
GAAGTCGGTGACCCTGAACAAGGATGGAATATTTGTTAAGATACTGGTCC
ATCGCAACCATATCAATAAACTCAACGTTTATAATCAGGTGGAATAATTT
GATTGGATGGTTGCTTTTATCGTATATCGATTTTGTTGAATCTAATAAAA
TGAGAACTTCAAGAGTCCTGTTGACAACTTTATTTTTTCGATTTTCTCTG
AAATCATTGATGCTATCATCTAGATTTAATAACGTTTACCATATCTTTTC
AGGTAGGCTTGGTAGCTGTCAACATTCTAGGATACCAACTTTCAAAGGAA
TTTGAAGGGCAACACCCGCAAGAGGTATAGGATTTTAATAATAAACATTT
TGATGTATAGTCTGATGCGATAGAAACAACGATATAATCAACTCTTAGGT
GATTAAGAATGAAAAAGCATCATAATTTTTAAGAGGATAAGAATCATATT
GGATTTTGGAAAGATTTTAACACAAGATTTTTCAAGTTTGATTGGCCAGA
ATTCGAGAGTGGAACAAACTACAAATTTCGACTCTTTTGACTTTTCAGAA
AACAGAAGATGTTGTGAATTTTTACATGAATCAAGTGACATCAGAAGATG
AAGTGGTCAATACCTCCAAACTTAATGCCTCTCCTCGGTATGAGTATGGT
AAAGAAATCTCCCCTTATGATGACCTGGCCTTCGACATGTACCAGGTAAT
TACTTTGTTTTATCCACTTAATATTCGAACTGAGCGTTTCCGAAATTCTT
TTTATCCTTACTGCATATCACAGTGGAATATTCTGGATGGTCGTATAATA
GATCTTCCTTCAGTATCTACCTTCAAAAAAGCAATCTTCAAGCTTCTAAG
GCCCAAACCTTCTCCTGTTTTTGGAGCTCGTGACAACCAGGATTGGTCCT
TCTCAATAGTCTTTGAGTAGGATTTAGTCACCTCAATGAACATAAATTTA
GCCACAGTTTTTGTGACACCTTAGATCCTTTTTGTGCGTGTAGGACAAAA
TTCTATCGAAAACTCTCAACACTTTCTTTTCCACTGCTCTATTTACTCTC
AGGCAAGACATCTTTTGTTCAACAAACTTCTGAACCAAGACATAAATATT
TATCCACTAAGCCCTCCTAAGCTCTTCAACATTTATTTGTACGGTGATCC
AGCATTACTTTTCAACATAAACAACTCAATGATTAATCTTGCCATTTGAT
TATTTGACAATTTAAATTATAACTTATTTGGCCTTGACTGATTCTAGCAT
AAGTCAACACAAGATCGACCAGCAAAACTTTAAGCTTTGATAAAGTTTGT
CAGTCCTTTGGTTGCCATCTTTAGAGCTGTATTTTTCAACATTTAGAGCT
TTTATATTGTTATTATACACTTAAAATGACAAACAAAATAACAAGAAGCA
TTTTTTGTTTTTGATAAAAAACTATATATTCGACCTCACTCACAAGAGTC
ATCATCAGAGTAAAAATCTAATACAGAATGAGAATTCTAAAATCAAAATT
TACAGAAAAAAGCTAATTAAAATGTTATAAAAACGATGTGTAAAAATCTA
AAATGATACCCATGGGACGCTAAACTGAGAAAACACTGAGACTAAATCGA
TAGCACAATAAAAGAGAGTAATTATCAAAGGAACAATATGCCTATGTCGT
AAAAAGTTGTAAAGTTTTGAATGAATTTTGAACGTTCAATGAAGGTTTTT
GTTCAGTGATTAAAAAAAAGTGATTAACACTTAAAATGATTGATAATATT
GTCTTGTTGTTGTTTATATTACAATCATTCATTTTAGGACTCAGAAACTG
CCCAACTCATCAGAAAACTCGATGAAAAGAAACATCAAGCCATCATTGGT
GGGTTTACTCTCAGCCCTAATTTGAAATTTCTTTTTTATTTGCTTTAGAA
TGTCCAGTCTTTCTAGGCTACATGTAATAGTTATTGTTGTTGGTCATTTC
GAAGTCTTTCGAGAATATTTAATAATTAAACCTATAACTATGATTTATTA
TTGCTAAAGTTCCTTTCATTTTATTTTCAGAGGAAAGATATGATTATGCT
AAGAAGTTGAAAGAAGCTATTTCTGATTTACACAAGGTTTTTAAAAATTA
TGATTTTATGTTCAGAAAGAGCGCCAGTTTACTTATCCAATATTTTTGAA
TTTTCCCTTCACATTCAAATACCTGAAAGCTCGTATTTTTAGTCAGTTGT
ATTCTTATTCTTTCACTTTTAGGTTGGTCAAAAACTTGGCAAATTTGAAG
TTGAGAAGAGGAGAGCTGTCGAGCTCGAAGATTTTGATACTGCAAAGAAG
AAAAAGGTGAACAATGCTATTTTATTCGACGTTATAACTATACAAAATTT
AATGCGTGTAAATCTAAAAGCATTACAAACGGATTCAAAACAACTTAACT
TTCGATTTCACTTTCAAAAAAAACACTCTTAAACAACTGATTAATCCTTT
AAGTGCCGATCTTTTTTCACACCTCGGCATTTTTTCACAACTCGACATGG
GCAACATGCCGACATGGGCAAAAGGTAGCGATTTTCACTTCATTTTCTGA
ATGATATATGAAGTATCAGCCAAGAACTATAATTTTAAGTTGACGATTGT
AGAATAGTTATTTTTCAGCATAGAAAAGTTTTTAACTATTCATTTTTTTC
ATTTCAAACCATCTAAAAAAAATTGTTGTAGAAGTGTTAAATTTTGCCGC
AAAGAAATGGAAAGTGCTCATATCGGCCAATCCCGACACCGGCAAAGAAA
TCGAGTTAAAGGGTTAAAAATTACCATGGGGTCTTATACAAGATGCGTAG
CCTAATCCTCGATAAAAGCATTTTAACAGATGTTATTTCGATTCAACAAA
CTTCTTTTTATCATTTCAGCTTCAAAGTGACGAGTACCGTGTCCACGTGT
ACAAACAGTTGGATATCCGTGATCTGTTACAAATCCCTAAAGTATGAATA
CTTTCCTTGTTGCTTTTTTACTCCCTTTTGGAATTAATTTTCGAGAAAAG
ATATTCGTGATATGCACCACTGCAATGTCTTCTGACATTACATCATGGAC
CCAATAGCTGATTGGTTGTAAGTGACGTAAAATCAGTCAGTACGTCACTT
TCAACCAATCAGCTGTTGGGTCCGTGGAAGACATTGTAATGGTGCATATC
ATGAATAAAGCCTGTCTTTGAAGCGATACTTTAATTTTTGAAGGACTGAT
TTTCTTCACCATTGGAAGCAACAAAAGATGAAGTTACATACATATCGAGT
TTATGTTGGTTCTTTTTACTCATTGTTGCGTTTAACTTTTTATGAGAAAA
ATACGTTTCATTTTAGCCTACTCGATTTCACTTAAGATTCCAAAAATTAT
AAACGAAGGAAGTATCACAAAGTTCACCATTTTCTGCATAATAACCATTT
GACTTCATCTCTCTGTAGTTCGAGAAGGACCACGTCCTACAAAACATTAC
AAATGTTCCAAAGCAACCATCAACTGTTCAAACTTTGTCTCCTAAGATTG
ATTCATCCATAACTACAAATACCAAGAGTGAGCCAGGTAAAAACTGTCTT
TTTAAATCATATTTCGGACTATTTGATGGAAGTAAAAAAACACGTTTTGA
ATATCCTAGATGCTGAAAATGCCGTGCGAGAATAAATCATTTCCTATGTA
AACTCTCTCCTACCAGTCCCTTCGAAGGCCTTACTTGGGTTGATAGACTA
TAACATAGCGTCAGCCCCCTCTGCTGGTTGGGGGGGGGGGTTACACCCTG
AATTTTTCCCAAAAAAGGAGGGGGCTGGAAGTACACCACTTTTTTGGGGG
GACCTATGTACTTGGGGGGACCTATGTACTTGGGGGGAGCTAAAATCTCA
TCACTTAACGTAGGGGCTAAAATAATTAAGCTTAATAGTTGGCTTCAACT
ACTCAAATTGAAGCTCATGAATCTGAAGATTTTTCGCCTGCAGCGCAATA
TTTTTATAGAAAGTGTGCAAAATATTTTATCTTAAACTTAGAACTGAACG
CAATTTACATTGGAAAACCCTATTTTACTGGATCATTTTTTTTTGAAAGT
GTCTAGGGTCAAAAGTCCTGGGGGCTAACAAAAAATTCATAAATCTTTGG
GGGGACTTAAAACTCAGGGGGGGGGACCTAATTTTTGCCTGGGACCTAAA
CCCAGGCTGAGGCTATGGTATAACTGAAACAGGGAATGTGTGATTTGACT
AACTCCTGTCTTGCACTCTTTCAGAGGAGGTACGTTTGCCACCAATCAAC
ACCAGTAGCACCATCAATAACATCAACCACCATAGCCTCCACCACACCTC
CACAACAACCGCCCGATCACCAAGACAACAGGTGGAAGAGAACATGTCGA
GTGTGGAAGCAATGCCTGAGATTAATGTTTCTGCCACTTATGATATTGAT
GAATGTCTGTCGCAGTCGGTGAGTTGGTGAATATTTTACCAGTTTGGTGT
TTACATATTACAACCCTAATATTTCATTTGACATTATTGTTATTCTTTTT
ATTCTCACACGTTTTATATTTTCGAGTGTTGATAAAAAGACTGCATAATT
AGCTATATCCTTATAGTTAGTAGCTTACCCTGTCTGGCTAGCTGAAAAAA
ATTCTGCTAAATTTAGGAAAATTAGAAAAATTAGAGAGACTAGAGAGGTG
AAACCGGTGAATCAATTACTTAAGAATCACTCTCTTCTCCATCGTTCTTG
TATTCAATGTTAGTTTCAAATACAAGCCTGTTCTCGAATTTGTGCTAAGG
AGTAGATTCTGTTTTATGATTTCCTTTTCATCTTTGGTTAGCAAAACAAG
AATGACGAGCGACCGTTACCATCACTGAACAACAGGAAATCTCAAGGTGT
GATTGAGGAGCAAGAAAATGAAAATGATACTCACAATGAGACAGGTTTAC
GCACTTTAAGTTTATCGTTCCTTATTATGTTATACAAAGGTAAAGATCTT
TCGACCTATTTAAACACAAGGAAAAATTGTTAATACACCCTTACCATTAC
CATTATTAGAGCATTATTGTATCGTTATTACACCCCTTACCACGAGTTTT
ATTACATTGAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010448XLOC_010448Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018677-exon-sc0000304-1575043694:175717..175722TCONS_00018677-exon-sc0000304-1575043694:175717..175722Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:174992..175115TCONS_00018677-exon-sc0000304-1575043694:174992..175115Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:172455..172527TCONS_00018677-exon-sc0000304-1575043694:172455..172527Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:171818..171857TCONS_00018677-exon-sc0000304-1575043694:171818..171857Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:171435..171533TCONS_00018677-exon-sc0000304-1575043694:171435..171533Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:171199..171270TCONS_00018677-exon-sc0000304-1575043694:171199..171270Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:170828..170974TCONS_00018677-exon-sc0000304-1575043694:170828..170974Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:169675..169735TCONS_00018677-exon-sc0000304-1575043694:169675..169735Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:169437..169492TCONS_00018677-exon-sc0000304-1575043694:169437..169492Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:169217..169300TCONS_00018677-exon-sc0000304-1575043694:169217..169300Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:168582..168653TCONS_00018677-exon-sc0000304-1575043694:168582..168653Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:167987..168104TCONS_00018677-exon-sc0000304-1575043694:167987..168104Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:167105..167298TCONS_00018677-exon-sc0000304-1575043694:167105..167298Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1575043694:166458..166731TCONS_00018677-exon-sc0000304-1575043694:166458..166731Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:175717..175722TCONS_00018677-exon-sc0000304-1510915933:175717..175722Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:174992..175115TCONS_00018677-exon-sc0000304-1510915933:174992..175115Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:172455..172527TCONS_00018677-exon-sc0000304-1510915933:172455..172527Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:171818..171857TCONS_00018677-exon-sc0000304-1510915933:171818..171857Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:171435..171533TCONS_00018677-exon-sc0000304-1510915933:171435..171533Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:171199..171270TCONS_00018677-exon-sc0000304-1510915933:171199..171270Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:170828..170974TCONS_00018677-exon-sc0000304-1510915933:170828..170974Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:169675..169735TCONS_00018677-exon-sc0000304-1510915933:169675..169735Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:169437..169492TCONS_00018677-exon-sc0000304-1510915933:169437..169492Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:169217..169300TCONS_00018677-exon-sc0000304-1510915933:169217..169300Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:168582..168653TCONS_00018677-exon-sc0000304-1510915933:168582..168653Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:167987..168104TCONS_00018677-exon-sc0000304-1510915933:167987..168104Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:167105..167298TCONS_00018677-exon-sc0000304-1510915933:167105..167298Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1510915933:166458..166731TCONS_00018677-exon-sc0000304-1510915933:166458..166731Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:175717..175722TCONS_00018677-exon-sc0000304-1491911889:175717..175722Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:174992..175115TCONS_00018677-exon-sc0000304-1491911889:174992..175115Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:172455..172527TCONS_00018677-exon-sc0000304-1491911889:172455..172527Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:171818..171857TCONS_00018677-exon-sc0000304-1491911889:171818..171857Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:171435..171533TCONS_00018677-exon-sc0000304-1491911889:171435..171533Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:171199..171270TCONS_00018677-exon-sc0000304-1491911889:171199..171270Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:170828..170974TCONS_00018677-exon-sc0000304-1491911889:170828..170974Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:169675..169735TCONS_00018677-exon-sc0000304-1491911889:169675..169735Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:169437..169492TCONS_00018677-exon-sc0000304-1491911889:169437..169492Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:169217..169300TCONS_00018677-exon-sc0000304-1491911889:169217..169300Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:168582..168653TCONS_00018677-exon-sc0000304-1491911889:168582..168653Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:167987..168104TCONS_00018677-exon-sc0000304-1491911889:167987..168104Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:167105..167298TCONS_00018677-exon-sc0000304-1491911889:167105..167298Clytia hemisphaericaexon
TCONS_00018677-exon-sc0000304-1491911889:166458..166731TCONS_00018677-exon-sc0000304-1491911889:166458..166731Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000304supercontigsc0000304:166458..175722 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	1.26607e-07	0	5.6274e-06	0	1.42739e-06	0	0	0	2.51328e-07	0.758191	0.0700697	0.8236	0.00259743	1.52524e-08	0.00218448	0	0	0	0.000492548	1.46744	0.0274774	2.62846e-08	0	0	0	0
Blast
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BLAST of TCONS_00018677 vs. Swiss-Prot (Human)
Match: CE104 (Centrosomal protein of 104 kDa OS=Homo sapiens GN=CEP104 PE=1 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 6.392e-83
Identity = 165/419 (39.38%), Postives = 245/419 (58.47%), Query Frame = 1 
Query:    1 VHSPTTRGWQSLRFCEYPQEIIFSLKEQCKITKIQVLSHQHNIGSKIEFFIGESKEQSL---RSCSFSRLGYVQLAPNAEANYQARELKSVTLNKDGIFVKILVHRNHINKLNVYNQVGLVAVNILGYQLSKEFEGQHPQEKTEDVVNFYMNQVTSEDEVVNTSKLNASPRYEYGKEISPYDDLAFDMYQDSETAQLIRKLDEKKHQAIIEERYDYAKKLKEAISDLHKVGQKLGKFEVEKRRAVELEDFDTAKKKKLQSDEYRVHVYKQLDIRDLLQIPKFEK--DHVLQNI--TNVPKQPSTVQTLSPKIDSSITTNTKSEPEEVRLPPXXXXXXXXXXXXXXXXXXXXXXARSPRQQ-VEENMSSVEAMPEINVSATYDIDECLSQSQNKNDERPLPSLNNRKSQGVIEEQENEND 1233
            +H+PT  GW+S RFC++PQEI+  + E+C+I K+Q+L+HQ+ I SKIEF+I ES  +     ++  F RLGYV L  N +   +ARELKSV ++  G F+K++ H+NH+NK N+YNQV LVA+NI+G     +F  +      E +++ Y+    SED  +  +    S   +Y   ISP DDLAFDMYQD E AQ+IRKLDE+K +A+ +ERYDYAKKLK+AI+DL KVG++LG++EVEKR AVE ED+D AK+KK Q ++YR  VY+QL++  LL      +  D  LQ +  +  P     + +L P+++   T N  +EP     P   + +                   SP+   V+  + + +  P+IN  +               DERPLP++     + V+E + +  D
Sbjct:   26 IHAPTVSGWRSPRFCQFPQEIVLQMVERCRIRKLQLLAHQYMISSKIEFYISESLPEYFAPYQAERFRRLGYVSLCDNEKTGCKARELKSVYVDAVGQFLKLIFHQNHVNKYNIYNQVALVAINIIGD--PADFSDESNTASREKLIDHYLGH-NSEDPALEGTYARKS---DY---ISPLDDLAFDMYQDPEVAQIIRKLDERKREAVQKERYDYAKKLKQAIADLQKVGERLGRYEVEKRCAVEKEDYDLAKEKKQQMEQYRAEVYEQLELHSLLDAELMRRPFDLPLQPLARSGSPCHQKPMPSL-PQLEERGTENQFAEPFLQEKPSSYSLTI------------------SPQHSAVDPLLPATDPHPKINAESL------------PYDERPLPAIRKHYGEAVVEPEMSNAD 404
The following BLAST results are available for this feature:
BLAST of TCONS_00018677 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CE1046.392e-8339.38Centrosomal protein of 104 kDa OS=Homo sapiens GN=... [more]
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