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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018687 ID=TCONS_00018687|Name=TCONS_00018687|organism=Clytia hemisphaerica|type=transcript|length=2055bp
tttccTGAAAACACATCAAATTTCCGTGAAATggacgtcactttttcttt
cGTACATTTCTCTTCTTTTAAATGTAAATCTTTCTGATAACTATCAAATA
AACTTTTAATCTTATTATTACATATATATAGGGTTGgctatattttattt
ctcattttgtGATATGTCAACTCGAAAGTTGGTCACAGCCtttactttct
ttaaatttactCTCTACAGTGGTCAAAGTCAAACAAATATGATATACATT
CAAGTAGTTAGTCTCTTTTTACTGTGTATAAATTTTAATATCGATTGTCC
ATTTTTACAGTAAAATCAAGGCAAAAACataaaatcaagatgaaaatttc
tccaaGAAGAAGTGAAACAAACAATAAAGATGGattgattattttattta
tttgtttggtGTGTTGTCAACAAAGCATCACAGGAGCAGTGGATGTTCAA
GCAAAGTCTTCATGTGCGATCGATTCAAAGTTGACCTTAAAAGTCGACAA
CAAAGAACTTGTCCAACCGCAACGGGGCTTATACGTCCTCGTTCTGAACA
CAACGAatggaaaatacaaaaacaaaagctTCGATCAACCAATGAAAAGC
TATTTCTGGGACATCTGGGAATcttccaaaagaaaaaaaaacaaactcaa
tttcataaaatacaTCCAGAACTTCCCAAACAATACCGTGATTGTGTTTG
TAACAAAAGGACTTTGTAAATACTCACAGTTTGGGGATTGGATCTCATTC
TTGGAGGAAGACACTGATTTGGTGTTTGAAGAGAAGGACTATAGAGGAGA
TTGGATGTCAGCAATCGTTGTGGCTTGTAAAACCAATTGTCCCAAAAATA
TTCGACCAATTTCGGTGTATGGACAAGATGCAGCTTTGAATGTGACTTTC
AGTGTAAAAGGTGATGAAAATGTTTTAGTGCCCGCGAAATCGGACGAgaa
cgaaaaaacaaaaatcattaTTATTGTTTGTGTCGCTGCAATCATAATAC
TGCTAGTCGCAATTTCCACTTTTTTGTTGTACCAACGTCTCCATAGTAAC
CGCaacaaacaaaacaatcaaGATGGTGAACCTATCAGTGAAGAGAGTGG
TCAAGCTTACGAAGATGCAGAGTATGAAAGAATAGGGAGCGTGACCTCTA
CATCACAAACTAATATTCCAACTCTGCAACAATATACCGATTTAAAACGA
CTGCATAGTCAACAATCAAATACCTCAAACACGTACCAAGGCTTACAGTT
GCCAGAGTCTAATGGTAGTGAATATAAAAGCCTTGAAACTTTCAGATTCA
ATTCACAGCATTCGAACGCTTCAACCACTTATACAGATCTCACACCAGCG
TCCATTGAAAGAGGTCAACTATCACCGTCAGCTCCGGACAATATTTATAG
CAGTATTGAAACTCCAACAGATGAAGCTTTACCGGGAACTAGTTTTAATC
TTTTTAAGCGGTCAATGGAGAATATAGACCAAGATCCGAAagatatcaat
aaaaacaatttctcATCTTATGTAAAAATGGATTGTgagaatcaaaattc
aaaaacgaaaatttatAAGAAACCATCGAGTGTTCCGAAGTTTCAACCAC
CCGTAAATGATGATGTGGTCATACCGGATATTTATGAGAATTCCGGATGT
AATGCAGTTACGGAGCCAGTCTATGAAACTGTTTAACGCTTCACTGATac
gtgatttgaaaataatacgtgaattgaaaataaaatacgATGGGTTATTG
GAACTATAATAAGACCAGTTTAAATGGTCATTCtgtatctttttttaatt
ttagacaTTTATTGAGAAATTATAAACtttgaaataatcaaaatttctaA
TACTTAGTTTTCTAATACAAGTTGTTTATTTATGTAGCTCTAAGCTGtag
aaaatatcttttatttaGCTAACCAGATTTGTAGAAAATTGGATTTGACT
GTtaataataatttgaaaaagaatccataaaaatgaaaaaatcatttata
tttttcctttcataacctttttttttttgcttaatcaCCGTTCAAAAGAC
CTTAA Run BLAST on NCBI protein sequence of TCONS_00018687-protein >TCONS_00018687-protein ID=TCONS_00018687-protein|Name=TCONS_00018687-protein|organism=Clytia hemisphaerica|type=polypeptide|length=448bp
MKISPRRSETNNKDGLIILFICLVCCQQSITGAVDVQAKSSCAIDSKLTL
KVDNKELVQPQRGLYVLVLNTTNGKYKNKSFDQPMKSYFWDIWESSKRKK
NKLNFIKYIQNFPNNTVIVFVTKGLCKYSQFGDWISFLEEDTDLVFEEKD
YRGDWMSAIVVACKTNCPKNIRPISVYGQDAALNVTFSVKGDENVLVPAK
SDENEKTKIIIIVCVAAIIILLVAISTFLLYQRLHSNRNKQNNQDGEPIS
EESGQAYEDAEYERIGSVTSTSQTNIPTLQQYTDLKRLHSQQSNTSNTYQ
GLQLPESNGSEYKSLETFRFNSQHSNASTTYTDLTPASIERGQLSPSAPD
NIYSSIETPTDEALPGTSFNLFKRSMENIDQDPKDINKNNFSSYVKMDCE
NQNSKTKIYKKPSSVPKFQPPVNDDVVIPDIYENSGCNAVTEPVYETV Run BLAST on NCBI transcript from alignment at sc0000304:208311..210726- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018687 ID=TCONS_00018687|Name=TCONS_00018687|organism=Clytia hemisphaerica|type=transcript|length=2416bp|location=Sequence derived from alignment at sc0000304:208311..210726- (Clytia hemisphaerica)
TTTCCTGAAAACACATCAAATTTCCGTGAAATGGACGTCACTTTTTCTTT
CGTACATTTCTCTTCTTTTAAATGTAAATCTTTCTGATAACTATCAAATA
AACTTTTAATCTTATTATTACATATATATAGGGTTGGCTATATTTTATTT
CTCATTTTGTGATATGTCAACTCGAAAGTTGGTCACAGCCTTTACTTTCT
TTAAATTTACTCTCTACAGTGGTCAAAGTCAAACAAATATGATATACATT
CAAGTAGTTAGTCTCTTTTTACTGTGTATAAATTTTAATATCGATTGTCC
ATTTTTACAGTAAAATCAAGGCAAAAACATAAAATCAAGATGAAAATTTC
TCCAAGAAGAAGTGAAACAAACAATAAAGATGGATTGATTATTTTATTTA
TTTGTTTGGTGTGTTGTCAACAAAGCATCACAGGAGCAGGTAAAATATTT
CCATTGGTTTGATTAGAATACGCCCCTGTTTACTGATGACGTGGGAGAAT
TATGAATTTCCAACAGGTTTCTTCTGAATTCAAGACCCAAGTTAACAAAG
AATATAAAAAACCATATTACTATTTTTTAACTTCAGTGGATGTTCAAGCA
AAGTCTTCATGTGCGATCGATTCAAAGTTGACCTTAAAAGTCGACAACAA
AGAACTTGTCCAACCGCAACGGGGCTTATACGTCCTCGTTCTGAACACAA
CGAATGGAAAATACAAAAACAAAAGCTTCGATCAACCAATGAAAAGCTAT
TTCTGGGACATCTGGGAATCTTCCAAAAGAAAAAAAAACAAACTCAATTT
CATAAAATACATCCAGAACTTCCCAAACAATACCGTGATTGTGTTTGTAA
CAAAAGGACTTTGTAAATACTCACAGTTTGGGGATTGGATCTCATTCTTG
GAGGAAGACACTGATTTGGTGTTTGAAGAGAAGGACTATAGAGGAGATTG
GATGTCAGCAATCGTTGTGGCTTGTAAAACCAATTGTCCCAAAAATATTC
GACCAATTTCGGTGTATGGACAAGATGCAGCTTTGAATGTGACTTTCAGT
GTAAAAGGTAAACACTTTTTGGTCTCTTCTTCCTTTTCCTGGTCTCTCCG
TTGTTTTTGAAAAATATTGGGTTAGTACAGGTTGGAACGATAAAATTGTT
GTAAAGAATGGAATTTGAGAATAACCCATATGAATAATTTTCATGCGTGC
TGTATTGCTTTATGTATTTAAAGAATAGAGGACTTTTATTTATTACATTC
TTTATTCTTAATACTTTTCAGGTGATGAAAATGTTTTAGTGCCCGCGAAA
TCGGACGAGAACGAAAAAACAAAAATCATTATTATTGTTTGTGTCGCTGC
AATCATAATACTGCTAGTCGCAATTTCCACTTTTTTGTTGTACCAACGTC
TCCATAGTAACCGCAACAAACAAAACAATCAAGATGGTGAACCTATCAGT
GAAGAGAGTGGTCAAGCTTACGAAGATGCAGAGTATGAAAGAATAGGGAG
CGTGACCTCTACATCACAAACTAATATTCCAACTCTGCAACAATATACCG
ATTTAAAACGACTGCATAGTCAACAATCAAATACCTCAAACACGTACCAA
GGCTTACAGTTGCCAGAGTCTAATGGTAGTGAATATAAAAGCCTTGAAAC
TTTCAGATTCAATTCACAGCATTCGAACGCTTCAACCACTTATACAGATC
TCACACCAGCGTCCATTGAAAGAGGTCAACTATCACCGTCAGCTCCGGAC
AATATTTATAGCAGTATTGAAACTCCAACAGATGAAGCTTTACCGGGAAC
TAGTTTTAATCTTTTTAAGCGGTCAATGGAGAATATAGACCAAGATCCGA
AAGATATCAATAAAAACAATTTCTCATCTTATGTAAAAATGGATTGTGAG
AATCAAAATTCAAAAACGAAAATTTATAAGAAACCATCGAGTGTTCCGAA
GTTTCAACCACCCGTAAATGATGATGTGGTCATACCGGATATTTATGAGA
ATTCCGGATGTAATGCAGTTACGGAGCCAGTCTATGAAACTGTTTAACGC
TTCACTGATACGTGATTTGAAAATAATACGTGAATTGAAAATAAAATACG
ATGGGTTATTGGAACTATAATAAGACCAGTTTAAATGGTCATTCTGTATC
TTTTTTTAATTTTAGACATTTATTGAGAAATTATAAACTTTGAAATAATC
AAAATTTCTAATACTTAGTTTTCTAATACAAGTTGTTTATTTATGTAGCT
CTAAGCTGTAGAAAATATCTTTTATTTAGCTAACCAGATTTGTAGAAAAT
TGGATTTGACTGTTAATAATAATTTGAAAAAGAATCCATAAAAATGAAAA
AATCATTTATATTTTTCCTTTCATAACCTTTTTTTTTTTGCTTAATCACC
GTTCAAAAGACCTTAA Coding sequence (CDS) from alignment at sc0000304:208311..210726- >TCONS_00018687 ID=TCONS_00018687|Name=TCONS_00018687|organism=Clytia hemisphaerica|type=CDS|length=4041bp|location=Sequence derived from alignment at sc0000304:208311..210726- (Clytia hemisphaerica)
GTGATGAAAATGTTTTAGTGCCCGCGAAATCGGACGAGAACGAAAAAACA
AAAATCATTATTATTGTTTGTGTCGCTGCAATCATAATACTGCTAGTCGC
AATTTCCACTTTTTTGTTGTACCAACGTCTCCATAGTAACCGCAACAAAC
AAAACAATCAAGATGGTGAACCTATCAGTGAAGAGAGTGGTCAAGCTTAC
GAAGATGCAGAGTATGAAAGAATAGGGAGCGTGACCTCTACATCACAAAC
TAATATTCCAACTCTGCAACAATATACCGATTTAAAACGACTGCATAGTC
AACAATCAAATACCTCAAACACGTACCAAGGCTTACAGTTGCCAGAGTCT
AATGGTAGTGAATATAAAAGCCTTGAAACTTTCAGATTCAATTCACAGCA
TTCGAACGCTTCAACCACTTATACAGATCTCACACCAGCGTCCATTGAAA
GAGGTCAACTATCACCGTCAGCTCCGGACAATATTTATAGCAGTATTGAA
ACTCCAACAGATGAAGCTTTACCGGGAACTAGTTTTAATCTTTTTAAGCG
GTCAATGGAGAATATAGACCAAGATCCGAAAGATATCAATAAAAACAATT
TCTCATCTTATGTAAAAATGGATTGTGAGAATCAAAATTCAAAAACGAAA
ATTTATAAGAAACCATCGAGTGTTCCGAAGTTTCAACCACCCGTAAATGA
TGATGTGGTCATACCGGATATTTATGAGAATTCCGGATGTAATGCAGTTA
CGGAGCCAGTCTATGAAACTGTTTAATGGATGTTCAAGCAAAGTCTTCAT
GTGCGATCGATTCAAAGTTGACCTTAAAAGTCGACAACAAAGAACTTGTC
CAACCGCAACGGGGCTTATACGTCCTCGTTCTGAACACAACGAATGGAAA
ATACAAAAACAAAAGCTTCGATCAACCAATGAAAAGCTATTTCTGGGACA
TCTGGGAATCTTCCAAAAGAAAAAAAAACAAACTCAATTTCATAAAATAC
ATCCAGAACTTCCCAAACAATACCGTGATTGTGTTTGTAACAAAAGGACT
TTGTAAATACTCACAGTTTGGGGATTGGATCTCATTCTTGGAGGAAGACA
CTGATTTGGTGTTTGAAGAGAAGGACTATAGAGGAGATTGGATGTCAGCA
ATCGTTGTGGCTTGTAAAACCAATTGTCCCAAAAATATTCGACCAATTTC
GGTGTATGGACAAGATGCAGCTTTGAATGTGACTTTCAGTGTAAAAGATG
AAAATTTCTCCAAGAAGAAGTGAAACAAACAATAAAGATGGATTGATTAT
TTTATTTATTTGTTTGGTGTGTTGTCAACAAAGCATCACAGGAGCAGGTG
ATGAAAATGTTTTAGTGCCCGCGAAATCGGACGAGAACGAAAAAACAAAA
ATCATTATTATTGTTTGTGTCGCTGCAATCATAATACTGCTAGTCGCAAT
TTCCACTTTTTTGTTGTACCAACGTCTCCATAGTAACCGCAACAAACAAA
ACAATCAAGATGGTGAACCTATCAGTGAAGAGAGTGGTCAAGCTTACGAA
GATGCAGAGTATGAAAGAATAGGGAGCGTGACCTCTACATCACAAACTAA
TATTCCAACTCTGCAACAATATACCGATTTAAAACGACTGCATAGTCAAC
AATCAAATACCTCAAACACGTACCAAGGCTTACAGTTGCCAGAGTCTAAT
GGTAGTGAATATAAAAGCCTTGAAACTTTCAGATTCAATTCACAGCATTC
GAACGCTTCAACCACTTATACAGATCTCACACCAGCGTCCATTGAAAGAG
GTCAACTATCACCGTCAGCTCCGGACAATATTTATAGCAGTATTGAAACT
CCAACAGATGAAGCTTTACCGGGAACTAGTTTTAATCTTTTTAAGCGGTC
AATGGAGAATATAGACCAAGATCCGAAAGATATCAATAAAAACAATTTCT
CATCTTATGTAAAAATGGATTGTGAGAATCAAAATTCAAAAACGAAAATT
TATAAGAAACCATCGAGTGTTCCGAAGTTTCAACCACCCGTAAATGATGA
TGTGGTCATACCGGATATTTATGAGAATTCCGGATGTAATGCAGTTACGG
AGCCAGTCTATGAAACTGTTTAATGGATGTTCAAGCAAAGTCTTCATGTG
CGATCGATTCAAAGTTGACCTTAAAAGTCGACAACAAAGAACTTGTCCAA
CCGCAACGGGGCTTATACGTCCTCGTTCTGAACACAACGAATGGAAAATA
CAAAAACAAAAGCTTCGATCAACCAATGAAAAGCTATTTCTGGGACATCT
GGGAATCTTCCAAAAGAAAAAAAAACAAACTCAATTTCATAAAATACATC
CAGAACTTCCCAAACAATACCGTGATTGTGTTTGTAACAAAAGGACTTTG
TAAATACTCACAGTTTGGGGATTGGATCTCATTCTTGGAGGAAGACACTG
ATTTGGTGTTTGAAGAGAAGGACTATAGAGGAGATTGGATGTCAGCAATC
GTTGTGGCTTGTAAAACCAATTGTCCCAAAAATATTCGACCAATTTCGGT
GTATGGACAAGATGCAGCTTTGAATGTGACTTTCAGTGTAAAAGATGAAA
ATTTCTCCAAGAAGAAGTGAAACAAACAATAAAGATGGATTGATTATTTT
ATTTATTTGTTTGGTGTGTTGTCAACAAAGCATCACAGGAGCAGGTGATG
AAAATGTTTTAGTGCCCGCGAAATCGGACGAGAACGAAAAAACAAAAATC
ATTATTATTGTTTGTGTCGCTGCAATCATAATACTGCTAGTCGCAATTTC
CACTTTTTTGTTGTACCAACGTCTCCATAGTAACCGCAACAAACAAAACA
ATCAAGATGGTGAACCTATCAGTGAAGAGAGTGGTCAAGCTTACGAAGAT
GCAGAGTATGAAAGAATAGGGAGCGTGACCTCTACATCACAAACTAATAT
TCCAACTCTGCAACAATATACCGATTTAAAACGACTGCATAGTCAACAAT
CAAATACCTCAAACACGTACCAAGGCTTACAGTTGCCAGAGTCTAATGGT
AGTGAATATAAAAGCCTTGAAACTTTCAGATTCAATTCACAGCATTCGAA
CGCTTCAACCACTTATACAGATCTCACACCAGCGTCCATTGAAAGAGGTC
AACTATCACCGTCAGCTCCGGACAATATTTATAGCAGTATTGAAACTCCA
ACAGATGAAGCTTTACCGGGAACTAGTTTTAATCTTTTTAAGCGGTCAAT
GGAGAATATAGACCAAGATCCGAAAGATATCAATAAAAACAATTTCTCAT
CTTATGTAAAAATGGATTGTGAGAATCAAAATTCAAAAACGAAAATTTAT
AAGAAACCATCGAGTGTTCCGAAGTTTCAACCACCCGTAAATGATGATGT
GGTCATACCGGATATTTATGAGAATTCCGGATGTAATGCAGTTACGGAGC
CAGTCTATGAAACTGTTTAATGGATGTTCAAGCAAAGTCTTCATGTGCGA
TCGATTCAAAGTTGACCTTAAAAGTCGACAACAAAGAACTTGTCCAACCG
CAACGGGGCTTATACGTCCTCGTTCTGAACACAACGAATGGAAAATACAA
AAACAAAAGCTTCGATCAACCAATGAAAAGCTATTTCTGGGACATCTGGG
AATCTTCCAAAAGAAAAAAAAACAAACTCAATTTCATAAAATACATCCAG
AACTTCCCAAACAATACCGTGATTGTGTTTGTAACAAAAGGACTTTGTAA
ATACTCACAGTTTGGGGATTGGATCTCATTCTTGGAGGAAGACACTGATT
TGGTGTTTGAAGAGAAGGACTATAGAGGAGATTGGATGTCAGCAATCGTT
GTGGCTTGTAAAACCAATTGTCCCAAAAATATTCGACCAATTTCGGTGTA
TGGACAAGATGCAGCTTTGAATGTGACTTTCAGTGTAAAAGATGAAAATT
TCTCCAAGAAGAAGTGAAACAAACAATAAAGATGGATTGATTATTTTATT
TATTTGTTTGGTGTGTTGTCAACAAAGCATCACAGGAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00018687-exon-sc0000304-1575043694:210288..210726 | TCONS_00018687-exon-sc0000304-1575043694:210288..210726 | Clytia hemisphaerica | exon |
| TCONS_00018687-exon-sc0000304-1575043694:209670..210140 | TCONS_00018687-exon-sc0000304-1575043694:209670..210140 | Clytia hemisphaerica | exon |
| TCONS_00018687-exon-sc0000304-1575043694:208311..209455 | TCONS_00018687-exon-sc0000304-1575043694:208311..209455 | Clytia hemisphaerica | exon |
| TCONS_00018687-exon-sc0000304-1510915933:210288..210726 | TCONS_00018687-exon-sc0000304-1510915933:210288..210726 | Clytia hemisphaerica | exon |
| TCONS_00018687-exon-sc0000304-1510915933:209670..210140 | TCONS_00018687-exon-sc0000304-1510915933:209670..210140 | Clytia hemisphaerica | exon |
| TCONS_00018687-exon-sc0000304-1510915933:208311..209455 | TCONS_00018687-exon-sc0000304-1510915933:208311..209455 | Clytia hemisphaerica | exon |
| TCONS_00018687-exon-sc0000304-1491911889:210288..210726 | TCONS_00018687-exon-sc0000304-1491911889:210288..210726 | Clytia hemisphaerica | exon |
| TCONS_00018687-exon-sc0000304-1491911889:209670..210140 | TCONS_00018687-exon-sc0000304-1491911889:209670..210140 | Clytia hemisphaerica | exon |
| TCONS_00018687-exon-sc0000304-1491911889:208311..209455 | TCONS_00018687-exon-sc0000304-1491911889:208311..209455 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000304 | supercontig | sc0000304:208311..210726 - |
Blast
The following BLAST results are available for this feature:
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