TCONS_00018740 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018740
Unique NameTCONS_00018740
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1483

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018740 ID=TCONS_00018740|Name=TCONS_00018740|organism=Clytia hemisphaerica|type=transcript|length=1483bp
TCTATCAAACAGTATTTTAGTGTGGAGTATGAATTAAGAAACAGATAATA
TTGTAATGAAAACAATTGAAAGTGTAGCCTTGACAACAAATGGTAAAGAG
AATATCAAGGAAGAATTGATTGAAGTCAGGATGGACATTCCTTCACCTGA
ATCACCTCCAAAAATGGTCCGCAAGAGCTTTCGTACAAAGAAAGCTCCAA
TTCATTTGATTGCAAGTGCTTTAGAGGAAAATCAAAAACTGAAAGCCAAA
GCTGCCAAGGCTAAAACAATTCGAATGAAAACACAATATTCATCAAACCT
TTACAATGATTTCAAATGTGACCATTGTGGATCAAGATATGTTGTCAACC
CAATGCGCAGAGGAAACAAGATTAGTACATCAAAATACAAAGCTGCACCA
AGGCATAAAGTTGATCCTGAAACCCAGAATCTTTTGACACTCTGTAATGC
TTGCGGCCTTAAATTTGGTCGTACAAAAAAGAACCGTTTTCTGAAGGCAC
AAATGTCCGGTGAAGATCAAGAACAATTTCTCAGAGAGAGTGAACAGTTT
GGGAAAGACCTTGCCCTAAAACTGGAAAATGAATCTGCTTCACAGTTGTT
TTGTGCTCATACAAAGAAGATTGGATGTGGTTGTATTCAAAAATACATTA
TCGGAAATTCTGAAGATTCAGAATGGTTCACCGAATCGATTACAGAAAGA
GCTAAAGAACTTTTGGAGGTCTTGGAAAAAGCGAACGAGCTGAAAAAGAT
GAAATGTTATGACCCTGCTCAACTGGAAAAGAAACCGGGCAAGACCAAtt
ctTTGAAAATTGGACTTGGTAACGGGCATCGTAAATCCAAAGAGTTTGAA
GATTATGTTTTGAACAAGAGAGTTATGTTGAGGAATGATATGAAGCTGTG
TGAGAAAGCAGCTCAGAGGATTCTTTCCTACTCCAATAATTTTCTTCACA
AACGTATGAAAACTGACCCCAACAAAGGGATTCGTGTAGAGAGACAAAAA
GGAAAAGCAGCACTAGGAAAATTGAAGGACATCGAAGACCTTCCACTAGA
ACCTTGCTGTGCTGATAACTGTGTTCGCGTAAGTATCACTCACTTATTGA
TATATTCTGGTCCGTAAAATACACACCTATAAGACAACTTCAGACAGACA
ACGAATAAATTCGGAAAATTCAGACATTAATATATGTTTACAAATATATT
TCACGTTAACTCTCCAACTCTCCAACTAGTTGACCTCCCCCAGTTCCCTT
GACTAATGAagcttttattcaaatttggtgTAATCAACAAGAAATTATGG
ACCCTTTCTCCCAAAGAAGATTTTTGCCTNACTCGGCCCATTCTCCCAGC
AAGGAACTCAAAGATGAAGTGCACTGGGGGCCAGTAGAGATCTAGACTAG
CCTCAAATACAAACAATGATCTCTACTGTCAGGGAAGATGGCAAACTAGC
TATATATAATATGTAATACAAATATAATATGCA
Run BLAST on NCBI

transcript from alignment at sc0000305:259867..275060-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018740 ID=TCONS_00018740|Name=TCONS_00018740|organism=Clytia hemisphaerica|type=transcript|length=15194bp|location=Sequence derived from alignment at sc0000305:259867..275060- (Clytia hemisphaerica)
TCTATCAAACAGTATTTTAGTGTGGAGTGTAAGTGATCCTTATTGCGCTA
TTTAACTTTTCTTTTAGGTGTTTTATGAGCACAAATTTAATTGATGAATT
CAAAATTTCTCCTTACGAAAGTACGAAAGTAAATTTATCATCAACTGAGA
ACTAACATTAAAGTAGTCTTAAAAAATGTTAAAGACATGTACCGCCAGCG
GCTCTAACTTGGAACGAGTGGTCGAAACATTTACCGTGAGCGGTCCTAAA
TCCGACAGCCCTGCCTAAATCCGACCCCCCAAATAACTGCTATGAAAAAA
AATTCATTATTTACAAACATTCCCTCTCCAAGTTGAACAATAAACTATAT
TGCAAGAACTCTCAAAACAAAACATCTAACAAGATGACTAAAATGTCAAG
ATGTCAATTAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCG
TCACAGCGAAAGGTTTGTTTTTATTTTAGTTTGTATCTTTGAAAGACCCC
ATCGGATTTAGGCAGGGCTGTCGGATTTAGGACCACTCACGGTAATTGTT
GTTGTAGTTTTCACATTTACTATTGAATCTCTTTCCAGTTTAGAGAGTAT
GGCAGAAATCATGGAGATCTTGAGGGCATGCGTGATCCATTTTCAAGGGC
AAGGGCAAATGTTTGATAATTTTCTGGTCTTAGGGGCAAAATTACGGAAA
ATTGGTCAATTTTGTTAGTTTTTTAGCTCTTTTTACCAGACCCGATCAAT
CGAACTTGTCGAACAAATCAAACAATCGAACTAATCGAATTCCATCGAAC
GATTAAAGTTCGATTAAATAAATTAATCGAACTCTAAGATTTTTAAAAAG
ATTGTGAGTGTTCGATTAAGTTCGATCAATGGGTTTCGGTTCGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACCAATTTTGTTCGA
CAAGTTTGTGCTGCTCCGCCACCGTATATTAGCTTCTTTTCAAAGCCAAA
TTCGGAATGTAAATCGGGAAATTACTTCCGATAAAGGATTACACACTTTT
TCTGTATCCTTTTAGCGCCAGAGAAGAGGTGGTTGGTTGGGGCGGGCGTA
GTATTCCGCCACTCGGCCGCGCGCGAAATCGCAACAGAGGGGTTACGGAC
TTTTTTTCCGGATAGACAAATATCCGGGTACAACAAACATTAAGCTGTTA
AGTCCGGGAACTGTCGAAATTGGCAATCGCGTGCCAGGACAAAGTTTTTG
CAAGCGAGGGAAGATATGAGGATTTTAATATTCATCGAACTAATCGAACT
TTTTACTGACCGAACTAATCGAACTGCTGTTGCTTCAAAAATTTTGAGTG
TTCGATTAGGTTCGATTAATTTTTTTAATCGAACTTTAATCGTTCGATGG
AGTTCGATTAGTTTGATTGTTCGATTGGTTCGACAAGTTCGATTGATCGG
GTCTGGTTTTTAACAGCTTTTCGGGGCTCAAAGATTGTGGGCAAGATTTC
AATGATATACCGTGAGATCGGCTAACTTACATCAGTGGAGGCTAACATGT
ATAGGTGAAGGCTTCTTCATAAAGACGAAAGACATGTATCTATTTTTCGG
ATCCGGTATGCGAGAATAGTGTCAGGACCTGCAGGCGACCTGGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTCGAAACAAGCACTCTTTTGTGATTTTCTCTTAATACAGTCTGGT
CTGCAGTTTGTACAATATAAATAGCCGTCAGAAGCGCTATCCTGGCATGA
ATCCGCGGCGCAGTGGATAAGGCAATGGGTTTCGAAACATCGAAGCTTTG
CATTTAGTGGGTTCGAATCCCACTGGTGGCGATCTGTCGGTAAGTCATTC
AGTAAGTTAGAAAACATAGAAAATAACTCACAAAGAACCAGAAATAAAGA
AAAACTACGAACAAGAGACTGGAAAGTACAAAATAAGTCCAGATCTGTCT
TTTGTCTTTATGAAGAAGCCACGACCACATGTATAGCCCTCAAATGAACC
TTGCTGGTCATTAAATACAAAGTTAATTCAAAACAAAAATGGTAGATTAG
AGCTTCGAGCGGAGCTGCGTAGTTTTATTTTAATGACCAGCCAGGTCATT
CATTTGAGTGCTATGCATGTTAGCCTCCACTGATGCAAGTTAACCAATCT
CACGGTAGTTTTTCCTTGGGGCAGTCATGACATGCTTTAAAAACTGGATC
TCTTTGACAACAAGTTTGTCAATCTATATTAAACTCCTACCGTGAAGTTG
GGTAACTTGCATCAGTCAGTTACATCAATATGCCTTCTTACCTGTCTTTA
AAAATATAAATTAAAGTAATCACGGAAAAGGACGCGAAAAAAAAGACATA
AGTGTGAGAACAGAGTAATCAAACTCGTTAGAAAAAGTTCCATTAGAAGT
CATAAAAAATCAACCTGAATAAATGCAATCGAAATTCCAGAGAACTTCAT
AATTCCCCAAACAATATTACATTACAACAAATGTAAATACACAGAGAGTA
CAAGCATATGTATCACATAAATTTTACAATTACGTCAGAGTAGACTACGC
TCGTCACCGAAGAGGTTTATTTGGAAAGGGTAATTATATTTTATTGTTCG
CTTCTTTTTTAAAGATTCGCCGGGTTGGAAAAGTATGAATTTCTTTGTAC
ATATTTTACCTACCCCAAATATTTAGGAGGCTGAGTTTTAAATGAATCGT
CGAGTTGAAACGAACGATAAATGTATCAAGGTCTGTTTTATTTACCCCCC
TGGTGACTTAACAAAAGAGACTTAATTCGATGTTACAATCCTATTATTGA
TAGTTTGTCTTGGCCTTTTTATAATGAGCGAGACATACGTTCTCTGATTA
CGCAATTTTCATATTGACATTTTCGAGGCATTTTGATGTAACTGTCAGTG
GAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCATCAAATGACTGACCAATCAAAGCAGCAAAA
TTTCAAAACAAATCNNNNNTCCGACAGCCCTGCCTAAATCCGATGGGGTC
TTTCAAAGATACAAACTAAAATAAAAACAAACCTTTCGCTGTGACGCAAC
GAAGATACCAAAGTTTCAAATAAACTTAGAGATTTGATACATAATCAATT
ACATAATTCAAAAATTTCGCGGGGACTTAATTTCGCGGGTAGCACTATTG
GGTATATACAATATCTTCACGATTTTGTGACTTTTACTATCATGCATGTT
GGTTTGTAAGTCCACGCACACACACAGAAAAGAATTTGTAACGTTGATTG
AATTGATATTGAGGTTCAAGTTCAAACTAAGAAATAAAATGAATGAAAAT
TCCTAAGTTTCTAATTAACAAAATAAATTGAGCCTTGAATTATAAATGTA
TTTGACAAGTAGAGCCTAACTTAACTTAACCTAAGGCCTGAACAGTCACT
GTGCAAAAAGAAACAAAGAAAACAGAAAAAGTGCAAACAAGAAACAAGAA
AAAACCTACCAGCTGGCCAAGAATGTGTGCTGGAAATGTGAGCCAGTGAA
AATACAAAGTTGAAATTGAAGTAAAATTCTGATTATTGTCATTTGTCATT
TGAAGTCATATTAATGTTGACTCTCTCATAGTCAACTTGTGACTGAGTAG
CGAGTGAGAAAAAGTTGGCCTTTTTAATAGATTTGATACAAAAAAACTAG
TTTGACAAGATATATAAACAATGAATATATAAAACTCTTGAGAAATCAAA
AGATAATTAAATAAAATGCGTGTGAAATAATTAATTACTAGATAATGACT
AAATGACAAAATGATAATAACTGACAAAGTGTTTGAAATAATTGATAACA
TCTATAGATAAATGACTTTAAAACATAGAACAAAACAAACGACGCATGAA
ACACGAGAATGCACAAGAGAGAAAAGACGCTGGGGACAAAAAGACACTGA
CAAAAACAAGACACTGAAAATTGAACTATAATATAAAATATTTTTGCTTT
TTTAAATATACTAAAAATTTGATGAATCACATTACACTCCCACCAAAAAA
GCAAACATTTAACATAATTTACGAATTCATTTACGAATCAAATCAACATA
TAAAGCCATTTCACCCAACTCTTTCATCATATCACAATCGTCCACGTGAT
GAATAACGACCAATGGTCGAACAGCTGGCTTTGTTTCTCGAAATACGTTT
TCATTTTCGTTACGATATCGAATGTTGGCCTTACGTGCCATCCCATCACG
ACTGAGACTCTTGACGATTCCATAGGTGTACGAGTTTGACAGAACTGATT
CGTTTTTGGTGAACAAGATGATATCGCCAACGTTGATTTTGTCTGATNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCAAACCAGGCATTGAAGATGAATTGGTTCTCCTTG
ATGATATTTGATGGGTTGGTAGATGATAGAATGCCAGTGGGGCAACGATT
ATTGTTTCGTCCCAATAGTTTACGATTCGGTGTTATCAAGTCGAGACATT
CAAAGTCTCCCACAATGTTACCAACAGCCAAGGGCAAGTTGTTAATTTGA
TTGCCAATAGATGATGATAGCGTTTCCCACTGAAGGATTGAAAGACGTTG
GTTGTGAACAGATTTTTCGATTGAACTGATGATTTTACGAATTTTTCGTT
CTACTTTTCCATGCATTGAGTGGCCTTGAACTGGACATAATTCGAACTCA
ACACGTGCTTATTTCATCAGTTGAAATACACATTATTTGTGCCTTTTTGA
TGCAAGTAACCATTCAAATAGTATTTATATGACGTATTTTGAGTTTGGTT
TAGAATATTTTGCGGATCAGGCCCTTCCAAATTTCCATTGGGACTTAATT
TTGCGGATAACACTCAAATCCGCAAAATTTAATCCCCGCAAAAGTTTATC
CCATTAAAGTAGTTACAGGGCTTTGTGCAAAAAAACAAACATAGAAGGTT
TTTCAAATCCCCTATTTTGATTGAGCCAATAAAAAATGAAACTTTTCCAT
GTTTCACATTTTTGCACCAATTCCTCAGATATTTTTATTAAGATTTAAAT
TTCTTCTTTTATTCAATGATTTTTACAGCACTTTGTTGACAATCTAACTC
TCGCATCAAATTTCCGCTTTCTTTAGTAAATACACTGTTTGTAGTGTTGA
CTGCAGGAAACTTCACTCTCCTCGTTAAAAACGGTAGGTAAAATTCTGGT
TCTGGTAAGGAAATCCAGCAGAGAAACAGTAGGTAAAGAACTTCTTTCTT
TTCTTTCGTTTATCTTTGAAAGATAAAAAAACATGCTGGTTAATTTTGAT
GAACAGGTTTGTTCTATCATTGTTGTTAAAGTTGAGAAAATTCTACTGAT
GCAGAAATTTTCTACGGCCAATTAAAGGCACGTCTGCTTATACTTACTAT
GTTTGCTATATCTTCTAGGCAAAAAGTGGTATAAAAAGACACACACATAA
TTCTTTATGAGTGCTGTTACGATATTTTAATGTTCCTAACTGATATTCAG
TGGTTTCATTTTCAATTTCAAGACAATATCTTAGCAACAATAGTTGCTCA
TAGTTAGTGGGGTTTAAGCAAAAAAAAAAAACATAGAAAATATTTCAATA
GGAAAGCTCATGAAATCCGCTAACTTAATTTTGAGTTTGGCAAATTCCCA
AGATTAGCGAACAAACTTTTTTCCCACTTACGGCTTTTTTCTTTAATCTT
TTATTGGTTTCTTTTGTTGATTGCTTGTGTCATTGAAGATTCACACATAA
TTTTGTGAAATGGAAACACAGGGTTTTTCCCAAGCTGCCAGGGGGTAAAA
CTCTGAAAAAATATTCTCACTATTCATTAATGATGCTGAAGATATTCAAA
GATTTAACTTAACACATGGTCAGAGCTTATTTTCTCTCTCTACTATTTGA
ACTAAGACCTTTCGCTTACATAAAATTCTGTATAGTTATCAAATGTAATT
TTCTTACGAGTCATAAATCCCTAAGTTAACATAGGTGTGAGGTAAATTAT
GCTTTGATATTATGAGATTATCCATTGTTCTGATTTTTCTACAGAAACTA
AAGTTTTACAGAGCAAATTTAATCCCGATTTCTTTAAATAGCTGTTTAAG
TAGTAAGTCTGCGACCGCAGTCGGAGGCAACCCAAAGGCTCCTCTTTCGA
TAGCTATCTACCCGAAGGTAGGGGAGGGCGCCACTCTTTCTCCCTGGATT
GCTCCACTTGCCCTTGATCCTTCTCTTAATTGCTGAGCATCAAGTAGAGA
GGCATCAAGTACCATTTTGGAAATCTTTGGTATGACCCGGCTAGGGCTTG
AACCCACAACCTTGCAAACCGTAGGCGGATGCTCTACCAGTATTGTATTT
TCACAAATTAAAACGCTAGGCTTCAAAATTCCAGGCAAGAAAAGGGTACC
CTGCAACCTAGCCTAATTGGCTACACTGCTTTTTAGACCAGCGCCTATTT
TGATTGAACCAATAAAAAATGAAATTTTCCCCTGTTTCACTTATTTACAC
TTTCAAAATAAAATTTCTTATCATAAATTCTTTTTATTCAGTTTTATTCA
GATAAAAATGACTTTTACAGAAGCAGAATTCAAGATTCAACCAGAGAATG
TGGAATTTTTGTACATACAGTAATTTAAATCTTAAACATATCTTAATTAC
ATATATTAATGTACGGATGAAATATTTTTTCCATAGATCAGATTCTTTTA
ATAAGGCGAGACCAATTAAATTTGTTGTTCTACGGGCCCGACCGACCCTA
TTTTTGCTAAAATCAAAAAAATAATATCGAATTTCCGCTACAATATATTT
TACACACTGAAGATTGACTGAAAATTGAAAACTAAAAATTAATTCAAGAA
ATTGAAAAATTTAGAAAATCAAGCATTCCATACTAAGATTTTATTATGAT
CTTCATCGAAGATAAAAAAAGTGAATTTTTGATCCAGATATTTTTTGGAA
AACATTTCCTTGGTACTTTACCAACCCTGATAAATGAAAAATTTATTTTT
ATTTTCCCGACCCACCGACCCATATTTTGCTAACGATCTTTTTTTTTTAT
TTATGTCTCTTTAATCACCAAAAATCTCGGTATATCTACTAAAAATATAT
ACAAGTAAAAATAAAATGTTACAACTTTTCTTTTTTTTTTTAAATAAAAT
AAAATCTACTAACTATATCATTTTTGTATTTAGTCGAAAACCCTCCTATC
CTATCCCTAATAAAAAGATATCTGATCATATTGAACAGAGTGTGACCAGC
ACCACCACAGCTAGATCTGCCTAAAGACAAGCTTTTTTCTTGTACTATTT
TTGACAATCAATCTTTTTTTTTGTTGATCAACACCTTATGAACTCGTTAT
AAGCCTGTGTAGGCAACACCACATTGTGGTATACTACAATTTGAGGGAAT
TCTCTGATTGTAAACTGACAAAAGAAAGCAATTCATGTTTTTATAAGCAT
TGCATGTATAACCATATCCAGAGGCTCAGATGTAGCAAAAATTTTAGCAT
ATCTATCTTAAGCATTAACTTCAGCCTAAGAAAAATGTGTTTCCTGGTTT
GGTCTATTTGTGGCTTGGATTTTTACAGATTTTTACTTCAAGTATTTTTC
AGCCATGTCAATCTCTTGATCTAAAAGCATCTCCAAGGCAGTTTTTTGAT
TTTATATGCTTATATAAAAAAAGTGAACAATCAAAGAGAAAAGCTGTGTT
AAAAATGAGTTGTCACCAATCTTAGAGATCTGCAAAAATCAGAATTAAAT
CATTGGGTTTCGTGAGGTTCCCCAGTTTTTAAATGATGGTCGCGCTCCTA
TTAGTTTCCTTGTGGTGAAGATTCATTGCCCCTGAATTCCAATTTATTCA
ATGGAAGGCCAAATTCCAACTCTCACATCAAATTCCCGCTTTCGCCTGAG
AACTAAAGATAAAAAATTCCAGCCCTTTGAATCATCGATTGAAACAAATA
ATAAATGGCATTAATGGGGTGACCTTTATAAGGTTACATGACGTTCAAGG
CCCTGAAAAGCCATTTGGGCCTGTGGACCTTTATCATATATATGTTTTTT
TTTATAAGCAAGTGTATGCCCCTTGGTCAGGCTCGTGTATGCTTAAGTTC
TCAAAGCATCCAGGCATAGTTTATGCTTATTATATGCTTAAGAATCATTC
TTATGATTCACCCCGAGCCAAGTTTTTAATGAAATTTCAGAAATTTTGTA
AAGTTTGTTCAGATTTTGGGAGCAGTGGAATGTTAGCTAGCCGTGGAATG
TCTTATTTTTTACTTGACCTCAACTAAACCTTTTTAAACAGATAAAAATT
ACCACTTGAAAAATATTTTAGGCTGACATATATGCTCATGTTATGCTTAG
GAATTCTGCAAATCTGAGCCTTCATATGCTTATAAGCGTTATGCTTATAA
AAAAAAACATGTAATGTGGCAATCTCACTAAAACCTTTTGATTGAATGAC
TTATATATAGAAGCACTCAGTAGAAGAGACCACTTTTGTTTTTATTGCAG
ATTTCAATTTTTGTCATTTTTTTATGTCTCAATTACATGCTTTTTATAAG
CATAAACATCCACAGGCTCAACTCTTGAAGTGTGCATTAACAATGTAAGT
GTATTTATACTGGTCTTGGTTGCAGAAAGTCACCTCATTTGTGTTGTTAA
TGATAAGATCTTAGACCACGCTATGTTCCAAAACATTGTGAATGTAAAAA
AAGAAGACGTTGCAAAACAAAACAGATCGAAAGGATTTTCCCCCACTATT
TTCATCGGAACAGAACTGCTCCGTTTTCTTCGTTCGGAAATGAGTATGAT
TACTTCCTATCCGTCACAAATACCACATCGGAGCGGTATGAAACCGTAAC
GTCTGAACATGGTCTTAGAATTAATAGTTCTGCTCTTTGATCACCAGTCA
GACCATAATTTATTATATACATGAGTAGTTTGTTTATCGATCAATCTTCT
TCATACAGCTTTTCTATTATGTTTTTTCAGATGAATTAAGAAACAGATAA
TATTGTAATGAAAACAATTGAAAGTGTAGCCTTGACAACAAATGGTAAAG
AGAATATCAAGGAAGAATTGATTGAAGTCAGGATGGACATTCCTTCACCT
GTATGTGTTCAATTATTTTGTGCAAAATATAATCAACTTTTGTCAACTTT
TTAAGGATTGGGAAGTCTTAATATTATCAAGACAAAATTTCATGGTTGTT
GACCCCAGATATATAGTTCATACACAATACAATAAATATAATTTAAACAA
TAGGCTCAAAGTGCCAAAATAACTGTAGAGCTTCTACAAAAATTTACTGG
TTCTTAAGTGTATTGTTGTATCAAAAAATAAGTATTTAAAATATGTTATT
CTAATGTCTATCATAGGAATCACCTCCAAAAATGGTCCGCAAGAGCTTTC
GTACAAAGAAAGCTCCAATTCATTTGATTGCAAGTGCTTTAGAGGAAAAT
CAAAAACTGAAAGCCAAAGCTGCCAAGGCTAAAACAATTCGAATGAAAAC
ACAATATTCATCAAACCTTTACAATGATTTCAAATGTGACCATTGTGGAT
CAAGATATGTTGTCAACCCAATGCGCAGAGGAAACAAGATTAGTACATCA
AAATACAAAGCTGCACCAAGGCATAAAGTTGATCCTGAAACCCAGAATCT
TTTGACACTCTGTAATGCTTGCGGTATGAAGATTTCTTTTCGTTAGTCTA
CTTCATTTTGAAAATGGTCGGGTAGCTCAGTCATCAGAACATTTAGTTAT
GGGTTCCATCCTGGGTCACCACCAACTCAGCAAAACGAGTGGGTTAGATG
GGGTAATCTGATCTGCGTGTTAAATTGCTGGGAGTAGTATGGTTCACTAC
CTCAGCATTAAAAAAAGGATGGACCCCCTCACTCCTCGCTCCGCAGACAA
CCATTAAGTGAATATTCTTACTGACTGACTTACTTGAAAACATTGAAAAT
AATGTTTTATTCAGCAAGGTTAATCCTATTCATGTCTATCAGGTATCAAA
ATATGCATATTCTTCATTAGTATTCTTTTTATGACACTTTATCCTTAACT
TTTAGGCCTTAAATTTGGTCGTACAAAAAAGAACCGTTTTCTGAAGGCAC
AAATGTCCGGTGAAGATCAAGAACAATTTCTCAGAGAGAGTGAACAGTTT
GGGAAAGACCTTGCCCTAAAACTGGAAAATGAATCTGGTAAACCTTATTG
TATTTGAAGGGGTCAGAAAGTTTTGGAAAAGGAGCATTTTGATAAAAAGA
GAAATGTTGGTGATTCTTGTTAAAACTGATGATATTTTTATTGCTCCTCT
TTTTCAGATAATTCCCTTGTGCGTTTTAGTGTGGAAGGTTTTTTATTCAT
TTCTGAGAGATAATGATCATTGGTACTACTGAAAATAATGAAATATTTAG
ATATTCTTCCTCTTTCAATAATACTCAAGAAGAATCCTTTTTTACATCGC
AACCTATACAAACAAAAAATGCTGGTACAAATAACTAACAACCAAAAACC
AAAAATAAGATTTTTCAATATTTCTTTGGTAGCTTCACAGTTGTTTTGTG
CTCATACAAAGAAGATTGGATGTGGTTGTATTCAAAAATACATTATCGGA
AATTCTGAAGGTATATAAAAATTCACTTTTGAACTAAAATTAATTTAAAT
TCAAATTAACTAAAAAGAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCCCCCCCCCCCCACTATTCTGGGGAGGGGGGGTG
CACACTATGTTTCAAACCAAAAATAAGATTTTTCAATATTTCTTTGATAG
CTTCACAGTTGTTTTGTGCTCATACAAAGAAGATTGGATGTGGTTGTATT
CAAAAATACATTATCGGAAATTCTGAAGGTATATAAAAATTCACTTTTGA
ACTAAAATTAATTTAAATTCAAATTAACTAAAAAGAAATTTTCTACACGG
GATATCATAACCCCTTAAAGCAACNCTGATGATATTTTTATTGCTCCTCT
TTTTCAGATAATTCCCTTGTGCGTTTTAGTGTGGAAGGTTTTTTATTCAT
TTCTGAGAGATAATGATTGGTAGTACTGANGGAATCAGATTTTGGTGCCA
GGGGGGAAGTGAAAATTTCAAGCTTGATGGGGGGAGAAAGGCGAATAGGG
GGTATATTCAGTCCTCTACCTAGTGGGGGGAGGAATAGGATCCTTCCTGG
TGTGTTTGGGCATTCAGGCTTATGAGCCTGTCTTTCTAGGGATTTTGAGA
GTCTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCC
CCCCCCCCCACTATTCTGGGGAGGGGGGGTGCACACTATGTTTCAAACCA
AAAATAAGATTTTTCAATATTTCTTTGATAGCTTCACAGTTGTTTTGTGC
TCATACAAAGAAGATTGGATGTGGTTGTATTCAAAAATACATTATCGGAA
ATTCTGAAGGTATATAAAAATTCACTTTTGAACTAAAATTAATTTAAATT
CAAATTAACTAAAAAGAAATTGTCTACACGGGATATCATTATAACCCCTT
AAAGCAACATATTGGTATNGCACAAATTTTAAAGACAGGTGGGGGGGAAA
GGCCAGATGGGGGATTTTAGCTCATATTAGGGGGGACCAAAAAGCTGGAG
GACGCCATGAACATACTGCAAGATTTTAATTTGACAGATGGTTGAAATAT
ACTCCCAATTTGGCTCTGTTTTGTTTATGTTATTTTATGTATTATTGTTA
TATTTTTACCTTTGTTCGCTGTTCATTCTGATGGTGAAAAAAATCAATTT
TGGCTGATCAAAAATTTTTTGCTTTATTAACTGTACACTATCCACCTAAG
TCTTTAAAGATTTCCTAAAAATATTTTCAAAGTTAAATTCTTTTCCATCA
AAGATTCAGAATGGTTCACCGAATCGATTACAGAAAGAGCTAAAGAACTT
TTGGAGGTCTTGGAAAAAGCGAACGAGCTGAAAAAGATGAAATGTTATGA
CCCTGCTCAACTGGAAAAGAAACCGGGCAAGACCAAGTAGGTTCAACCCT
TTGGTTTTGCTTATTGTAAAAATCCTACAAAATTATACATTCAAAATATA
AAAGGCATAACAAATAGCCAGGCATCAACAAAAATGTAAAAATGTGGATT
TTGTGTACTAAAAAGAAGAGAAAGACAAATCTAGGAGTTCAGTGTTTAAA
GATCTTCCGAAAGCAAACGAAATTATGGAGTTTTTTATCGTCACTTTATC
ATGGTTTTATTTGCTATAGAAATCTTAATCCTCTAACTTCTTGTTGGAAC
TTTAAAAAATTTGTCTGTTCTTAATAAAAACTGGCTTAATATTTTATACA
GACAAAAACTACCACTGTTTTTCCTTCTTTTTTTGAGAATTTTTACAATT
TGGTTTTGAAAACTAAGGGATTCTTTTCTTTATTTTTATTTTAGATTAAG
ATCTTCCTTTTTAATTTTATCGGTCAGAAATCCAAATGAGTTCGTGTGGT
GGTGAAACAGCGAAACAGTTCATTGTTTTTCAATCCTAAGATTAACTCAA
AGATTTTCATTTTGTTTATGATTCCCATCATAAATTTTTCTTATTATTTT
TTTCAGTTCTTTGAAAATTGGACTTGGTAACGGGCATCGTAAATCCAAAG
AGTTTGAAGATTATGTTTTGAACAAGAGAGTTATGTTGAGGAATGATATG
AAGCTGTGTGAGAAAGCAGCTCAGAGGATTCTTTCCTACTCCAATAATTT
TCTTCACAAACGTATGAAAACTGACCCCAACGTAAGATTGATTTGTAGTT
TACTTCTAATTTCTATACAGGGTGTCCCGAAAAAAGTCCTTTGTCAGAAC
AAGACTTCAAGTAGAAAATTTTTTGTGTCTGTATGTCAAAAGTTTGCATT
TACATACTTTGATATAACGCACCCTCTTTAAGTCGAAAATTCGAAAGTAA
GAGCAAAACGAAACTGTTAATTCTAATTCTCCATTAATGAAGAAATTCTT
CTTTTTTTGTTTATATCATTTGCTACTAGGGGTATAATTTGTTAAAAACT
TATTATTAGGATTTTAAGGTCAAATTTCTTAATTTGACTGTTACGTAAGT
CCATCCTTTCAAACATATTTAGGGTTTGTTATTTTAAATTTCGTAAACTT
GTTCCTGAAATTCCTTGTGTTTTTATTCTTATAGAAAGGGATTCGTGTAG
AGAGACAAAAAGGAAAAGCAGCACTAGGAAAATTGAAGGACATCGAAGAC
CTTCCACTAGAACCTTGCTGTGCTGATAACTGTGTTCGCGTAAGTATCAC
TCACTTATTGATATATTCTGGTCCGTAAAATACACACCTATAAGACAACT
TCAGACAGACAACGAATAAATTCGGAAAATTCAGACATTAATATATGTTT
ACAAATATATTTCACGTTAACTCTCCAACTCTCCAACTAGTTGACCTCCC
CCAGTTCCCTTGACTAATGAAGCTTTTATTCAAATTTGGTGTAATCAACA
AGAAATTATGGACCCTTTCTCCCAAAGAAGATTTTTGCCTNACTCGGCCC
ATTCTCCCAGCAAGGAACTCAAAGATGAAGTGCACTGGGGGCCAGTAGAG
ATCTAGACTAGCCTCAAATACAAACAATGATCTCTACTGTCAGGGAAGAT
GGCAAACTAGCTATATATAATATGTAATACAAATATAATATGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010490XLOC_010490Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018740-exon-sc0000305-1575043694:275033..275060TCONS_00018740-exon-sc0000305-1575043694:275033..275060Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1575043694:264761..264880TCONS_00018740-exon-sc0000305-1575043694:264761..264880Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1575043694:264188..264494TCONS_00018740-exon-sc0000305-1575043694:264188..264494Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1575043694:263674..263805TCONS_00018740-exon-sc0000305-1575043694:263674..263805Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1575043694:262683..262760TCONS_00018740-exon-sc0000305-1575043694:262683..262760Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1575043694:261525..261657TCONS_00018740-exon-sc0000305-1575043694:261525..261657Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1575043694:260780..260954TCONS_00018740-exon-sc0000305-1575043694:260780..260954Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1575043694:259867..260376TCONS_00018740-exon-sc0000305-1575043694:259867..260376Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1510915933:275033..275060TCONS_00018740-exon-sc0000305-1510915933:275033..275060Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1510915933:264761..264880TCONS_00018740-exon-sc0000305-1510915933:264761..264880Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1510915933:264188..264494TCONS_00018740-exon-sc0000305-1510915933:264188..264494Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1510915933:263674..263805TCONS_00018740-exon-sc0000305-1510915933:263674..263805Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1510915933:262683..262760TCONS_00018740-exon-sc0000305-1510915933:262683..262760Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1510915933:261525..261657TCONS_00018740-exon-sc0000305-1510915933:261525..261657Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1510915933:260780..260954TCONS_00018740-exon-sc0000305-1510915933:260780..260954Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1510915933:259867..260376TCONS_00018740-exon-sc0000305-1510915933:259867..260376Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1491911889:275033..275060TCONS_00018740-exon-sc0000305-1491911889:275033..275060Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1491911889:264761..264880TCONS_00018740-exon-sc0000305-1491911889:264761..264880Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1491911889:264188..264494TCONS_00018740-exon-sc0000305-1491911889:264188..264494Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1491911889:263674..263805TCONS_00018740-exon-sc0000305-1491911889:263674..263805Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1491911889:262683..262760TCONS_00018740-exon-sc0000305-1491911889:262683..262760Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1491911889:261525..261657TCONS_00018740-exon-sc0000305-1491911889:261525..261657Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1491911889:260780..260954TCONS_00018740-exon-sc0000305-1491911889:260780..260954Clytia hemisphaericaexon
TCONS_00018740-exon-sc0000305-1491911889:259867..260376TCONS_00018740-exon-sc0000305-1491911889:259867..260376Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000305supercontigsc0000305:259867..275060 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.72694	2.33465	1.25242	1.09155	0.163361	3.69452	3.11035	0.00218509	1.83128	3.03267	0.00744595	1.70208	2.02714	1.80413	1.82691	2.24508	2.96042	0.856971	1.29239	1.80727	1.65876	1.52498	3.44667	3.70308	3.08407	1.33852	1.88359	1.62758	3.64703	3.76605
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018740 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top