TCONS_00018771 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018771
Unique NameTCONS_00018771
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1032

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018771 ID=TCONS_00018771|Name=TCONS_00018771|organism=Clytia hemisphaerica|type=transcript|length=1032bp
gaaaaaaataataagataataataaaataatactGCAAAAATGGCATCGA
ACGAGGATTTTGAAGAAATGGCACCCTCCATCCAACATTTATTGGATCAA
AAAGAATTACGCTGGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGTAAGAC
AACTTGCAGTTGTAGTGTTGCAATCCAGCTTGCTAAGCACAAGAAAAATG
TTCTCATCATTTCTACTGATCCTGCACATAACATTTCCGATGCTTTCGAC
CAAAAGTTTGGTAGAAAACCAACTGCTGTTAAAGGATTTACAAACCTATT
CGCGATGgaaattgatCCAAATCTTGGGTTAACAAAACTTCCAGAAGATG
TTCTCGAGGACCAGGACTTCATGTCAATGGGAGGAAAGATGTTTCAAGAC
TTGTTGGGGGCTTTCCCTGGAATCGACGAAGCAATGAGTTTTGCTGAAGT
CATGAAACTGGTTCGCAGCATGGATTTCTCTGTCGTCGTATTCGATACAG
CTCCAACAGGGCACACGCTTCGCTTAATATCCTTTCCCAGCGTCATGGAG
AAATCTTTGGAGAAATTACTGGCACTAAAATCACGTATACAACCTATGAT
TCAACAGTTCAGCACACTCCTTGGGATGCAAGATATGAACATGGAACAAT
TCACATCGAGACTGGATGAAACGCTACCAGTTATTAAAGAAGTATCGGCC
CAATTCCAAAACCCTgaCCACACTACATTTGTCTGTGTTTGCATCTCAGA
ATTCCTTTCACTCTACGAAACAGAACATCTTGTACAAGAACTCACCAAAA
TGAATATGGATATTCGAACTATAATTGTAAATCAACTGGtctttcctaag
aaattgcaaggagGTTCGGCATGCGATTTATGTTCAGCAAGGTCAAATAT
ACAAAAGAAGTACTTAGAAGAAATAGCAGATTTATATGAAGACTTCCACG
TGATCAAGTTACCGCTTCTACCGAAAGAAGTTCGTGGACCACAGCAAATT
GAAACCTTCTCTGATTGGCTAATCAACCCTTA
Run BLAST on NCBI

protein sequence of TCONS_00018771-protein

>TCONS_00018771-protein ID=TCONS_00018771-protein|Name=TCONS_00018771-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
MASNEDFEEMAPSIQHLLDQKELRWVFVGGKGGVGKTTCSCSVAIQLAKH
KKNVLIISTDPAHNISDAFDQKFGRKPTAVKGFTNLFAMEIDPNLGLTKL
PEDVLEDQDFMSMGGKMFQDLLGAFPGIDEAMSFAEVMKLVRSMDFSVVV
FDTAPTGHTLRLISFPSVMEKSLEKLLALKSRIQPMIQQFSTLLGMQDMN
MEQFTSRLDETLPVIKEVSAQFQNPDHTTFVCVCISEFLSLYETEHLVQE
LTKMNMDIRTIIVNQLVFPKKLQGGSACDLCSARSNIQKKYLEEIADLYE
DFHVIKLPLLPKEVRGPQQIETFSDWLINP
Run BLAST on NCBI

transcript from alignment at sc0000306:102905..110502+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018771 ID=TCONS_00018771|Name=TCONS_00018771|organism=Clytia hemisphaerica|type=transcript|length=7598bp|location=Sequence derived from alignment at sc0000306:102905..110502+ (Clytia hemisphaerica)
gaaaaaaataataagataataataaaataatactGCAAAAATGGCATCGA
ACGAGGATTTTGAAGAAATGGCACCCTCCATCCAACATTTATTGGATCAA
AAAGAATTACGCTGGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGTAAGAC
AACTTGCAGGTATGGCGAGAAATATTTAGAAAGACGTTGCCTGAGATTGT
TATCTTTGTCTATTATTCTTTACATAGGACTAAGATGTTTTGTNGGCGAG
AAATATTTAGAAAGATGTTGAATGAGATTGTTATTGCATTGTCTATTATT
CTTTACATGGGACTAAGATGTTTTGTATtagtctttaaaaattcttccGG
CCTTTGGTTTCTAAACCGAAGTTTGTAAGTTCAattttgattgatatttt
tgtcatgaaatagtttttgtttcttaaagaccttttgaaataatttctta
CCACAAGACTGTTCATTGAAATATAAGATAAAAACACTCTgtatttttcc
tcaaaaattgacttcattTGACATACCCCCTCCAttacatttttaaacaa
aataagaaaaacaaatttttctcccttccaCACCGGACGAGCAcaaattt
tgagcaattctatCATTTATAttatgctttgtcagcataataGACACGCC
TCTattctatatcataaaaaaatatatctttaaAGTGTTCCTTTTCTTTA
CAATTGCAGTTGTAGTGTTGCAATCCAGCTTGCTAAGCACAAGAAAAATG
TTCTCATCATTTCTACTGATCCTGCACATAACATTTCCGATGCTTTCGAC
CAAAAGTTTGGTAGAAAACCAACTGCTGTTAAAGGATTTACAAACCTATT
CGCGATGGTTAGTTTTATTGAGATATTCTATGTGAATTTTTGATCTCATA
ATGTATTGGATAATAAGATCAgtgccattgagtttcaagcccgaagggct
agaggcgagactatTGGATGGGAAATGCCCATCCTACGCCCGCgtgtagt
ttttacacaaacgccggattgaaactaaaatctatcgcttgatttcaaaa
aatgtagtcttccaaaacaaaggaatcggTAGATACAATCCGTCATCATG
ATTACGGTGTGTTCTATGTgcattttggatgggaaataagtggcttcaat
ttctcttgcctgagtaGGGTTAAAGTTTAcgtctctagcccttcggactt
gaAACTCAACGATCAGTGCTCACAAAATCCAGGCTAATTTGTTGTGTTGG
AGTCTATTTTCTGTTTGGGATGAAAAGCTTTAGCTTTGCCTACTGATAAG
ATATAAACAGTGTTGTAATAAATTGGTTATCTAAATTGGTATTATAGTCA
TTTTCTCactttttcttaggaaattgatCCAAATCTTGGGTTAACAAAAC
TTCCAGAAGATGTTCTCGAGGACCAGGGTAGAGAATCGATCTATTTTTAT
TGGGTTATCGTGATTTCTAATTAAGTTTCTATGAATAAGGGTCATTCTGC
TGGACTAATTATCGAggttgttcttttttttgttaatttttggacctacc
ccggtggggtgaaggtcctataaattcacctctgtccgttcgtccgtctg
tccgttcgttaccagcttttctcgagattgNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNgattgaatcataggaatcatttgatttttggtacaaaggtgc
aaaacagtggtggccaaaatgtgacggagcccgattttcgaaaaaaaatg
tttttgggcaaatttgggccaaaaaacggctaaaaagcgggttttttgga
ctttgtgaaacattggatcattgattttttctgattttttgcagggaagt
agggtaccatcataggtataagatggctcagggagatttttgcaaaaaga
tttgttggctcaaaaaaacgcatgtttatctataagaatcactattaata
agcatacatcaatgttcttagtcaaNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAGctgtcaaaacaaatgtcagcCACATTTATCACCTGAa
gtgtaaaaaaattgaaaaattgtcaattttcaaatgtcacactatttttg
accatgatcatatgtgttaaatgcataaccaggtaggtccataaaagtat
cacttgttttttattgtttgataGAAGAAGAGGTTAGTTCAGGTTTGCCC
TTCCTGTTCTATTTATGAATTAAATTGGGCAGTCTAAAGTCATTGTATCG
TCCTCTTTTGacttatttcaattttatttcaagcaaaaacttttccaATT
GGATGCCCAATTTTTGCCTACTGACAATTAGAATAGGTAGGAAAGTTGTC
CGTCTATAAGCTAAAAGTTAGATTCACtttgaaatagattttcgaTCTCA
TAATCTTTTTGTGCTGTTTTACAGACTTCATGTCAATGGGAGGAAAGATG
TTTCAAGACTTGTTGGGGGCTTTCCCTGGAATCGACGAAGCAATGAGTTT
TGCTGAAGTCATGAAGTGAGTATCCCATTTATTATACCCTTTGTACAGTG
TATtaactccataactcgaacacgtacAGAGAACACAcatttgttcgatt
taaggaaATAAatagtaaggtttataaggcattgtttaCTTGTTCGATTT
ATAGAGGTTCAAATAATTTAGCGACATTAACCATCNGTCATGAAGTGAGT
ATTGCTTCCCATTTATTATACCCTTTGTACAGTGtattctccataactcg
aacacgtgCAGAGAACACAcatttgttcgatttaaggaaATAAatagtaa
ggtttataaggcattgttgacttgttcgagttatagaggttcaaatAATT
TAGAGACAATAATCATAAAGAATGGTTCACTGTAAAAGTATTATCATTTC
AAccaattatttttacataacTCTCTACCAGACTGGTTCGCAGCATGGAT
TTCTCTGTCGTCGTATTCGATACAGCTCCAACAGGGCACACGCTTCGCTT
AATATCCTTTCCCAGCGTCATGGAGAAATCTTTGGAGAAATTACTGGCAC
TAAAATCACGTATACAACCTATGATTCAACAGGTTAGTGTAACATGGTGT
TAAGAACTTTGTTCATAGTGTGCAAAGTAGAGTACTTTTACGCAtacaaa
ctttcgcgggcaAAAACTTTCGCGGTTTCCacaaattttggcccttttcg
ccaATTCTTGGAAGGGCCATTGGCGAAAGTTTTTGCTTGCGAAAATgttt
tgacaaaatagaaaatatttgtaaaactttaaactttgaaTCAAAtgtat
tttgttactttttggcCTAttataagactaataagtcaaaagaCAAAAGT
TTCCAGCTTAGGATGCCTTTGTTTAGGATGAAAATTTTACTTATTGAtac
gcgaaagtttatgcttgagaagaatatttttttgtcaaattcggGATAGT
AAAAAAATGTCGTAAACTTCGCGATTTTCAACCTCGCTAAAGTTTCTGAt
cgtgaaagtttgtacaccAAAGTAGGGGTCAAGGTCCCtcaaaaaaacat
ttccagCACATGTTAAAAACCCGAATCAATCAAGCATGTTCTCAAGGCCC
TCAATGCTGTTATTTTATCTCGAGAAGTgtgtattttcttattttcccta
TCTTTATCGTGATACAGACTTTTTGATATCTGCTATAGTAAAGTCCATCC
GAATTAATTTAATTCTCTTTCTTGCTATCATGTGGAGACCACTCTCAACG
TAATAATTTCTCTGACATGGTTTCCACAAAGAAGTAATGAACAGTACGCA
CATAtaaagcgaatggactttagAGTAGTAAAATAGATCTTGATCAAGCT
GGCTGACGGACAAACCTACCTTAACTGGATTAAATTTtgtgtggattaat
tttggcgattttCGCCGCGaaatttgaccattttcttgaaaattttagtc
ctcggaaaaaaattaaaacctaaATTTTGTCAAAGCCTCCAGGAAAATGA
ACGAAATTGGTTGAAAAAGAGGCCGATTCGCGAAATTCTGTCCATGCGAA
AATTAATTCACTTAAGGTACTTTTTAATCCATCATTTTGTTctcattctt
tttctttctacAGTTCAGCACACTCCTTGGGATGCAAGATATGAACATGG
AACAATTCACATCGAGACTGGATGAAACGCTACCAGTTATTAAAGAAGTA
TCGGCCCAATTCCAAAACCCTGTAAGACTCGAAAAATCATAGACacctag
ctggcacacaacgttgtttcatctttatctaacgttcacaacgtccttac
aacgttaaatgaacgttgaaacaacgttgtgtgccagctgggcatgTATT
TTAATcggatttattttcaaaagactTCATTTTGCTTATTTGctaatttt
tgcctttttgcaATTATAAGTTTTTGCTATTTGTGGCAAAATTTTGTCGC
TTTCAGGATTATTGTTAACAGATTTTTGGCTGATTCTCAAAATTAAATCA
ATAGTAATTTTGCTTGAAGCTTGTATCACACCTGTTCACTTATTTGGTTT
TATTCGATCGTCTTATCTGTAGTATGGGAGTTTTGAGCCCATTGGAAAGA
TTGATACAACAGTTCATTACAAGCACAAAGAAATCACCCTACACAAATTC
GAAAAAGAGATGGttggtttttgaaaagttttggtGTTTTAGATTAGTTC
TTATTTGATAGGATTCTTCACTATGCAATAtcctttttcaatattttcag
gaCCACACTACATTTGTCTGTGTTTGCATCTCAGAATTCCTTTCACTCTA
CGAAACAGAACATCTTGTACAAGAACTCACCAAAATGAATATGGATATTC
GAACTATAATTGTAAATCAACTGGtctttcctaagaaattgcaaggaggt
atttttgaatttgttttgattataaaGTACTGGCTAAAATAGTAGCGatg
tatttgtatttttgacgacggtgGAGTGACAGAagcgattttggaaaaac
ccgcagttttgacccacaaaattgaggacggtaaaagtgctgttTTACCG
TCGTACTCAGTTGGCCAGGatctagaaaatttagaaacttACTGTCTCCA
CCACAGGAAACACATATACATAAACTCACTATAGTGTTAAGTTAATACTC
AGAACGATATTCATTGGAAATGctgaaaacaagaaaattaaaCATTCGGC
TACGTTTCAACAGGTTTTCAGCCGGATCATGCTATAGACTTAagaaaatg
gtacttgatgcctctctgctaaATAGGGGAATCCAGGGAATGGAATTGCG
CCCTGGGTAAGCAGCTAAGAAAAAGGACGTCTTCGAGTCGCCCCAGGCTA
GACTGCGGTCGCAAATTTTCTTACTACATCAAGCTCTAGCGACTCTACCC
AGTGCCAGGGTCATACAGTCAGAAACATGGCGTTCTAATTCTACAGGCCT
ATCAAGCGGGCAGACACTTCGGTTTTGTGGGGGCTTAATTTTTCGAAGTC
GTTACATTGATGCTTGTACAAAATGTACTATTGAGCGAGAATTGCTAGGT
CTGGAACGCCATGGTCATAGAGGATTGATGCNGCTTGTACAAGATGTACT
ATTGAGCGAGAATTGCTAGACCTGGAACGCCATGGTCATAGAGGATTGAT
GTTCGTATTCAaactttatcatttttaatcttttagGTTCGGCATGCGAT
TTATGTTCAGCAAGGTCAAATATACAAAAGAAGTACTTAGAAGAAGTAAG
ACTTATCTTTAACAACTCTGGCGATTTTTCACTGACTCAAACCCTTTTTA
TTTTTGGCCTGTGATTGggctttttctgaaatttcccGTACCCCCTCCCC
TTTTGAGCATATCCATTTTTCGAGTTCCACAGCCCCCATGTCTGGCTTTA
GAGACCCCTGGTGTCCAAGTCGACAGAAGGGTGGAGGATATCTTTGTGGT
TTGTCTGTACTCCCTGAATATACAGGCATTTCGTCctgtaccccctggat
atcctctctctCTCTTATAAGGTCCCATCCCTTAGATATCCAGATAGCAT
TGAACCAGTTGATGTCCGttaccaaaaatggcccacttagaactctctca
ttcgttgcccgacttcaattaagcaagccaggctTCCGACATTTTCAATA
GGGTAAGACACGGACTATTTCTTGAAAAGCCTATTTCCTGGATTCACTTA
TACTATGGATTTTCTTTCCAATAGTTTCCTGCGAGGAGCCGTTTTTACCT
TAGCTTTCAccaagaaaattacaaaaaaaacagccaCTCTCTTTCCAACG
CGTTTAGCCTTCAAGAATTTTTGGAATACTTCTAGCCCTTCTCTCACCAA
atttattggcttgtttttNTTTTTGGCCTGTGATTGGGCTTTTCCCGTAC
CGCCCCCCTCACCAAATTTATTGGCTTGTTTTCATTAGATAGCAGATTTA
TATGAAGACTTCCACGTGATCAAGTTACCGCTTCTACCGAAAGAAGTTCG
TGGACCACAGCAAATTGAAACCTTCTCTGATTGGCTAATCAACCCTTA

Coding sequence (CDS) from alignment at sc0000306:102905..110502+

>TCONS_00018771 ID=TCONS_00018771|Name=TCONS_00018771|organism=Clytia hemisphaerica|type=CDS|length=8910bp|location=Sequence derived from alignment at sc0000306:102905..110502+ (Clytia hemisphaerica)
ATGGCATCGAACGAGGATTTTGAAGAAATGGCACCCTCCATCCAACATTT
ATTGGATCAAAAAGAATTACGCTGGGTGTTTGTTGGTGGTAAAGGGGGCG
TTGGTAAGACAACTTGCAGTTGTAGTGTTGCAATCCAGCTTGCTAAGCAC
AAGAAAAATGTTCTCATCATTTCTACTGATCCTGCACATAACATTTCCGA
TGCTTTCGACCAAAAGTTTGGTAGAAAACCAACTGCTGTTAAAGGATTTA
CAAACCTATTCGCGATGgaaattgatCCAAATCTTGGGTTAACAAAACTT
CCAGAAGATGTTCTCGAGGACCAGGACTTCATGTCAATGGGAGGAAAGAT
GTTTCAAGACTTGTTGGGGGCTTTCCCTGGAATCGACGAAGCAATGAGTT
TTGCTGAAGTCATGAAACTGGTTCGCAGCATGGATTTCTCTGTCGTCGTA
TTCGATACAGCTCCAACAGGGCACACGCTTCGCTTAATATCCTTTCCCAG
CGTCATGGAGAAATCTTTGGAGAAATTACTGGCACTAAAATCACGTATAC
AACCTATGATTCAACAGTTCAGCACACTCCTTGGGATGCAAGATATGAAC
ATGGAACAATTCACATCGAGACTGGATGAAACGCTACCAGTTATTAAAGA
AGTATCGGCCCAATTCCAAAACCCTgaCCACACTACATTTGTCTGTGTTT
GCATCTCAGAATTCCTTTCACTCTACGAAACAGAACATCTTGTACAAGAA
CTCACCAAAATGAATATGGATATTCGAACTATAATTGTAAATCAACTGGt
ctttcctaagaaattgcaaggagGTTCGGCATGCGATTTATGTTCAGCAA
GGTCAAATATACAAAAGAAGTACTTAGAAGAAATAGCAGATTTATATGAA
GACTTCCACGTGATCAAGTTACCGCTTCTACCGAAAGAAGTTCGTGGACC
ACAGCAAATTGAAACCTTCTCTGATTGGCTAATCAACCCTATGGCATCGA
ACGAGGATTTTGAAGAAATGGCACCCTCCATCCAACATTTATTGGATCAA
AAAGAATTACGCTGGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGTAAGAC
AACTTGCAGTTGTAGTGTTGCAATCCAGCTTGCTAAGCACAAGAAAAATG
TTCTCATCATTTCTACTGATCCTGCACATAACATTTCCGATGCTTTCGAC
CAAAAGTTTGGTAGAAAACCAACTGCTGTTAAAGGATTTACAAACCTATT
CGCGATGgaaattgatCCAAATCTTGGGTTAACAAAACTTCCAGAAGATG
TTCTCGAGGACCAGGACTTCATGTCAATGGGAGGAAAGATGTTTCAAGAC
TTGTTGGGGGCTTTCCCTGGAATCGACGAAGCAATGAGTTTTGCTGAAGT
CATGAAACTGGTTCGCAGCATGGATTTCTCTGTCGTCGTATTCGATACAG
CTCCAACAGGGCACACGCTTCGCTTAATATCCTTTCCCAGCGTCATGGAG
AAATCTTTGGAGAAATTACTGGCACTAAAATCACGTATACAACCTATGAT
TCAACAGTTCAGCACACTCCTTGGGATGCAAGATATGAACATGGAACAAT
TCACATCGAGACTGGATGAAACGCTACCAGTTATTAAAGAAGTATCGGCC
CAATTCCAAAACCCTgaCCACACTACATTTGTCTGTGTTTGCATCTCAGA
ATTCCTTTCACTCTACGAAACAGAACATCTTGTACAAGAACTCACCAAAA
TGAATATGGATATTCGAACTATAATTGTAAATCAACTGGtctttcctaag
aaattgcaaggagGTTCGGCATGCGATTTATGTTCAGCAAGGTCAAATAT
ACAAAAGAAGTACTTAGAAGAAATAGCAGATTTATATGAAGACTTCCACG
TGATCAAGTTACCGCTTCTACCGAAAGAAGTTCGTGGACCACAGCAAATT
GAAACCTTCTCTGATTGGCTAATCAACCCTATGGCATCGAACGAGGATTT
TGAAGAAATGGCACCCTCCATCCAACATTTATTGGATCAAAAAGAATTAC
GCTGGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGTAAGACAACTTGCAGT
TGTAGTGTTGCAATCCAGCTTGCTAAGCACAAGAAAAATGTTCTCATCAT
TTCTACTGATCCTGCACATAACATTTCCGATGCTTTCGACCAAAAGTTTG
GTAGAAAACCAACTGCTGTTAAAGGATTTACAAACCTATTCGCGATGgaa
attgatCCAAATCTTGGGTTAACAAAACTTCCAGAAGATGTTCTCGAGGA
CCAGGACTTCATGTCAATGGGAGGAAAGATGTTTCAAGACTTGTTGGGGG
CTTTCCCTGGAATCGACGAAGCAATGAGTTTTGCTGAAGTCATGAAACTG
GTTCGCAGCATGGATTTCTCTGTCGTCGTATTCGATACAGCTCCAACAGG
GCACACGCTTCGCTTAATATCCTTTCCCAGCGTCATGGAGAAATCTTTGG
AGAAATTACTGGCACTAAAATCACGTATACAACCTATGATTCAACAGTTC
AGCACACTCCTTGGGATGCAAGATATGAACATGGAACAATTCACATCGAG
ACTGGATGAAACGCTACCAGTTATTAAAGAAGTATCGGCCCAATTCCAAA
ACCCTgaCCACACTACATTTGTCTGTGTTTGCATCTCAGAATTCCTTTCA
CTCTACGAAACAGAACATCTTGTACAAGAACTCACCAAAATGAATATGGA
TATTCGAACTATAATTGTAAATCAACTGGtctttcctaagaaattgcaag
gagGTTCGGCATGCGATTTATGTTCAGCAAGGTCAAATATACAAAAGAAG
TACTTAGAAGAAATAGCAGATTTATATGAAGACTTCCACGTGATCAAGTT
ACCGCTTCTACCGAAAGAAGTTCGTGGACCACAGCAAATTGAAACCTTCT
CTGATTGGCTAATCAACCCTATGGCATCGAACGAGGATTTTGAAGAAATG
GCACCCTCCATCCAACATTTATTGGATCAAAAAGAATTACGCTGGGTGTT
TGTTGGTGGTAAAGGGGGCGTTGGTAAGACAACTTGCAGTTGTAGTGTTG
CAATCCAGCTTGCTAAGCACAAGAAAAATGTTCTCATCATTTCTACTGAT
CCTGCACATAACATTTCCGATGCTTTCGACCAAAAGTTTGGTAGAAAACC
AACTGCTGTTAAAGGATTTACAAACCTATTCGCGATGgaaattgatCCAA
ATCTTGGGTTAACAAAACTTCCAGAAGATGTTCTCGAGGACCAGGACTTC
ATGTCAATGGGAGGAAAGATGTTTCAAGACTTGTTGGGGGCTTTCCCTGG
AATCGACGAAGCAATGAGTTTTGCTGAAGTCATGAAACTGGTTCGCAGCA
TGGATTTCTCTGTCGTCGTATTCGATACAGCTCCAACAGGGCACACGCTT
CGCTTAATATCCTTTCCCAGCGTCATGGAGAAATCTTTGGAGAAATTACT
GGCACTAAAATCACGTATACAACCTATGATTCAACAGTTCAGCACACTCC
TTGGGATGCAAGATATGAACATGGAACAATTCACATCGAGACTGGATGAA
ACGCTACCAGTTATTAAAGAAGTATCGGCCCAATTCCAAAACCCTgaCCA
CACTACATTTGTCTGTGTTTGCATCTCAGAATTCCTTTCACTCTACGAAA
CAGAACATCTTGTACAAGAACTCACCAAAATGAATATGGATATTCGAACT
ATAATTGTAAATCAACTGGtctttcctaagaaattgcaaggagGTTCGGC
ATGCGATTTATGTTCAGCAAGGTCAAATATACAAAAGAAGTACTTAGAAG
AAATAGCAGATTTATATGAAGACTTCCACGTGATCAAGTTACCGCTTCTA
CCGAAAGAAGTTCGTGGACCACAGCAAATTGAAACCTTCTCTGATTGGCT
AATCAACCCTATGGCATCGAACGAGGATTTTGAAGAAATGGCACCCTCCA
TCCAACATTTATTGGATCAAAAAGAATTACGCTGGGTGTTTGTTGGTGGT
AAAGGGGGCGTTGGTAAGACAACTTGCAGTTGTAGTGTTGCAATCCAGCT
TGCTAAGCACAAGAAAAATGTTCTCATCATTTCTACTGATCCTGCACATA
ACATTTCCGATGCTTTCGACCAAAAGTTTGGTAGAAAACCAACTGCTGTT
AAAGGATTTACAAACCTATTCGCGATGgaaattgatCCAAATCTTGGGTT
AACAAAACTTCCAGAAGATGTTCTCGAGGACCAGGACTTCATGTCAATGG
GAGGAAAGATGTTTCAAGACTTGTTGGGGGCTTTCCCTGGAATCGACGAA
GCAATGAGTTTTGCTGAAGTCATGAAACTGGTTCGCAGCATGGATTTCTC
TGTCGTCGTATTCGATACAGCTCCAACAGGGCACACGCTTCGCTTAATAT
CCTTTCCCAGCGTCATGGAGAAATCTTTGGAGAAATTACTGGCACTAAAA
TCACGTATACAACCTATGATTCAACAGTTCAGCACACTCCTTGGGATGCA
AGATATGAACATGGAACAATTCACATCGAGACTGGATGAAACGCTACCAG
TTATTAAAGAAGTATCGGCCCAATTCCAAAACCCTgaCCACACTACATTT
GTCTGTGTTTGCATCTCAGAATTCCTTTCACTCTACGAAACAGAACATCT
TGTACAAGAACTCACCAAAATGAATATGGATATTCGAACTATAATTGTAA
ATCAACTGGtctttcctaagaaattgcaaggagGTTCGGCATGCGATTTA
TGTTCAGCAAGGTCAAATATACAAAAGAAGTACTTAGAAGAAATAGCAGA
TTTATATGAAGACTTCCACGTGATCAAGTTACCGCTTCTACCGAAAGAAG
TTCGTGGACCACAGCAAATTGAAACCTTCTCTGATTGGCTAATCAACCCT
ATGGCATCGAACGAGGATTTTGAAGAAATGGCACCCTCCATCCAACATTT
ATTGGATCAAAAAGAATTACGCTGGGTGTTTGTTGGTGGTAAAGGGGGCG
TTGGTAAGACAACTTGCAGTTGTAGTGTTGCAATCCAGCTTGCTAAGCAC
AAGAAAAATGTTCTCATCATTTCTACTGATCCTGCACATAACATTTCCGA
TGCTTTCGACCAAAAGTTTGGTAGAAAACCAACTGCTGTTAAAGGATTTA
CAAACCTATTCGCGATGgaaattgatCCAAATCTTGGGTTAACAAAACTT
CCAGAAGATGTTCTCGAGGACCAGGACTTCATGTCAATGGGAGGAAAGAT
GTTTCAAGACTTGTTGGGGGCTTTCCCTGGAATCGACGAAGCAATGAGTT
TTGCTGAAGTCATGAAACTGGTTCGCAGCATGGATTTCTCTGTCGTCGTA
TTCGATACAGCTCCAACAGGGCACACGCTTCGCTTAATATCCTTTCCCAG
CGTCATGGAGAAATCTTTGGAGAAATTACTGGCACTAAAATCACGTATAC
AACCTATGATTCAACAGTTCAGCACACTCCTTGGGATGCAAGATATGAAC
ATGGAACAATTCACATCGAGACTGGATGAAACGCTACCAGTTATTAAAGA
AGTATCGGCCCAATTCCAAAACCCTgaCCACACTACATTTGTCTGTGTTT
GCATCTCAGAATTCCTTTCACTCTACGAAACAGAACATCTTGTACAAGAA
CTCACCAAAATGAATATGGATATTCGAACTATAATTGTAAATCAACTGGt
ctttcctaagaaattgcaaggagGTTCGGCATGCGATTTATGTTCAGCAA
GGTCAAATATACAAAAGAAGTACTTAGAAGAAATAGCAGATTTATATGAA
GACTTCCACGTGATCAAGTTACCGCTTCTACCGAAAGAAGTTCGTGGACC
ACAGCAAATTGAAACCTTCTCTGATTGGCTAATCAACCCTATGGCATCGA
ACGAGGATTTTGAAGAAATGGCACCCTCCATCCAACATTTATTGGATCAA
AAAGAATTACGCTGGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGTAAGAC
AACTTGCAGTTGTAGTGTTGCAATCCAGCTTGCTAAGCACAAGAAAAATG
TTCTCATCATTTCTACTGATCCTGCACATAACATTTCCGATGCTTTCGAC
CAAAAGTTTGGTAGAAAACCAACTGCTGTTAAAGGATTTACAAACCTATT
CGCGATGgaaattgatCCAAATCTTGGGTTAACAAAACTTCCAGAAGATG
TTCTCGAGGACCAGGACTTCATGTCAATGGGAGGAAAGATGTTTCAAGAC
TTGTTGGGGGCTTTCCCTGGAATCGACGAAGCAATGAGTTTTGCTGAAGT
CATGAAACTGGTTCGCAGCATGGATTTCTCTGTCGTCGTATTCGATACAG
CTCCAACAGGGCACACGCTTCGCTTAATATCCTTTCCCAGCGTCATGGAG
AAATCTTTGGAGAAATTACTGGCACTAAAATCACGTATACAACCTATGAT
TCAACAGTTCAGCACACTCCTTGGGATGCAAGATATGAACATGGAACAAT
TCACATCGAGACTGGATGAAACGCTACCAGTTATTAAAGAAGTATCGGCC
CAATTCCAAAACCCTgaCCACACTACATTTGTCTGTGTTTGCATCTCAGA
ATTCCTTTCACTCTACGAAACAGAACATCTTGTACAAGAACTCACCAAAA
TGAATATGGATATTCGAACTATAATTGTAAATCAACTGGtctttcctaag
aaattgcaaggagGTTCGGCATGCGATTTATGTTCAGCAAGGTCAAATAT
ACAAAAGAAGTACTTAGAAGAAATAGCAGATTTATATGAAGACTTCCACG
TGATCAAGTTACCGCTTCTACCGAAAGAAGTTCGTGGACCACAGCAAATT
GAAACCTTCTCTGATTGGCTAATCAACCCTATGGCATCGAACGAGGATTT
TGAAGAAATGGCACCCTCCATCCAACATTTATTGGATCAAAAAGAATTAC
GCTGGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGTAAGACAACTTGCAGT
TGTAGTGTTGCAATCCAGCTTGCTAAGCACAAGAAAAATGTTCTCATCAT
TTCTACTGATCCTGCACATAACATTTCCGATGCTTTCGACCAAAAGTTTG
GTAGAAAACCAACTGCTGTTAAAGGATTTACAAACCTATTCGCGATGgaa
attgatCCAAATCTTGGGTTAACAAAACTTCCAGAAGATGTTCTCGAGGA
CCAGGACTTCATGTCAATGGGAGGAAAGATGTTTCAAGACTTGTTGGGGG
CTTTCCCTGGAATCGACGAAGCAATGAGTTTTGCTGAAGTCATGAAACTG
GTTCGCAGCATGGATTTCTCTGTCGTCGTATTCGATACAGCTCCAACAGG
GCACACGCTTCGCTTAATATCCTTTCCCAGCGTCATGGAGAAATCTTTGG
AGAAATTACTGGCACTAAAATCACGTATACAACCTATGATTCAACAGTTC
AGCACACTCCTTGGGATGCAAGATATGAACATGGAACAATTCACATCGAG
ACTGGATGAAACGCTACCAGTTATTAAAGAAGTATCGGCCCAATTCCAAA
ACCCTgaCCACACTACATTTGTCTGTGTTTGCATCTCAGAATTCCTTTCA
CTCTACGAAACAGAACATCTTGTACAAGAACTCACCAAAATGAATATGGA
TATTCGAACTATAATTGTAAATCAACTGGtctttcctaagaaattgcaag
gagGTTCGGCATGCGATTTATGTTCAGCAAGGTCAAATATACAAAAGAAG
TACTTAGAAGAAATAGCAGATTTATATGAAGACTTCCACGTGATCAAGTT
ACCGCTTCTACCGAAAGAAGTTCGTGGACCACAGCAAATTGAAACCTTCT
CTGATTGGCTAATCAACCCTATGGCATCGAACGAGGATTTTGAAGAAATG
GCACCCTCCATCCAACATTTATTGGATCAAAAAGAATTACGCTGGGTGTT
TGTTGGTGGTAAAGGGGGCGTTGGTAAGACAACTTGCAGTTGTAGTGTTG
CAATCCAGCTTGCTAAGCACAAGAAAAATGTTCTCATCATTTCTACTGAT
CCTGCACATAACATTTCCGATGCTTTCGACCAAAAGTTTGGTAGAAAACC
AACTGCTGTTAAAGGATTTACAAACCTATTCGCGATGgaaattgatCCAA
ATCTTGGGTTAACAAAACTTCCAGAAGATGTTCTCGAGGACCAGGACTTC
ATGTCAATGGGAGGAAAGATGTTTCAAGACTTGTTGGGGGCTTTCCCTGG
AATCGACGAAGCAATGAGTTTTGCTGAAGTCATGAAACTGGTTCGCAGCA
TGGATTTCTCTGTCGTCGTATTCGATACAGCTCCAACAGGGCACACGCTT
CGCTTAATATCCTTTCCCAGCGTCATGGAGAAATCTTTGGAGAAATTACT
GGCACTAAAATCACGTATACAACCTATGATTCAACAGTTCAGCACACTCC
TTGGGATGCAAGATATGAACATGGAACAATTCACATCGAGACTGGATGAA
ACGCTACCAGTTATTAAAGAAGTATCGGCCCAATTCCAAAACCCTgaCCA
CACTACATTTGTCTGTGTTTGCATCTCAGAATTCCTTTCACTCTACGAAA
CAGAACATCTTGTACAAGAACTCACCAAAATGAATATGGATATTCGAACT
ATAATTGTAAATCAACTGGtctttcctaagaaattgcaaggagGTTCGGC
ATGCGATTTATGTTCAGCAAGGTCAAATATACAAAAGAAGTACTTAGAAG
AAATAGCAGATTTATATGAAGACTTCCACGTGATCAAGTTACCGCTTCTA
CCGAAAGAAGTTCGTGGACCACAGCAAATTGAAACCTTCTCTGATTGGCT
AATCAACCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010511XLOC_010511Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018771-exon-sc0000306-1491911889:102905..103063TCONS_00018771-exon-sc0000306-1491911889:102905..103063Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1510915933:102905..103063TCONS_00018771-exon-sc0000306-1510915933:102905..103063Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1575043694:102905..103063TCONS_00018771-exon-sc0000306-1575043694:102905..103063Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1491911889:103614..103761TCONS_00018771-exon-sc0000306-1491911889:103614..103761Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1510915933:103614..103761TCONS_00018771-exon-sc0000306-1510915933:103614..103761Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1575043694:103614..103761TCONS_00018771-exon-sc0000306-1575043694:103614..103761Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1491911889:104274..104331TCONS_00018771-exon-sc0000306-1491911889:104274..104331Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1510915933:104274..104331TCONS_00018771-exon-sc0000306-1510915933:104274..104331Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1575043694:104274..104331TCONS_00018771-exon-sc0000306-1575043694:104274..104331Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1491911889:106379..106469TCONS_00018771-exon-sc0000306-1491911889:106379..106469Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1510915933:106379..106469TCONS_00018771-exon-sc0000306-1510915933:106379..106469Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1575043694:106379..106469TCONS_00018771-exon-sc0000306-1575043694:106379..106469Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1491911889:106886..107036TCONS_00018771-exon-sc0000306-1491911889:106886..107036Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1510915933:106886..107036TCONS_00018771-exon-sc0000306-1510915933:106886..107036Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1575043694:106886..107036TCONS_00018771-exon-sc0000306-1575043694:106886..107036Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1491911889:108068..108175TCONS_00018771-exon-sc0000306-1491911889:108068..108175Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1510915933:108068..108175TCONS_00018771-exon-sc0000306-1510915933:108068..108175Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1575043694:108068..108175TCONS_00018771-exon-sc0000306-1575043694:108068..108175Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1491911889:108705..108852TCONS_00018771-exon-sc0000306-1491911889:108705..108852Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1510915933:108705..108852TCONS_00018771-exon-sc0000306-1510915933:108705..108852Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1575043694:108705..108852TCONS_00018771-exon-sc0000306-1575043694:108705..108852Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1491911889:109641..109699TCONS_00018771-exon-sc0000306-1491911889:109641..109699Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1510915933:109641..109699TCONS_00018771-exon-sc0000306-1510915933:109641..109699Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1575043694:109641..109699TCONS_00018771-exon-sc0000306-1575043694:109641..109699Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1491911889:110393..110502TCONS_00018771-exon-sc0000306-1491911889:110393..110502Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1510915933:110393..110502TCONS_00018771-exon-sc0000306-1510915933:110393..110502Clytia hemisphaericaexon
TCONS_00018771-exon-sc0000306-1575043694:110393..110502TCONS_00018771-exon-sc0000306-1575043694:110393..110502Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018771-proteinTCONS_00018771-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306supercontigsc0000306:102905..110502 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	3.20874e-07	5.14145	5.89759	17.7972	13.327	1.36724e-06	0	0	0	0	0	7.82165e-07	0	6.34341e-07	0	0.00215943	0	2.08506e-07	0	0	1.21059e-09	13.2731	21.1972	2.07764e-06	9.78979e-09	0	4.60828e-06
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR025723Anion-transp_ATPase-like_dom
IPR016300ATPase_ArsA/GET3
IPR027542ATPase_ArsA/GET3_euk
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016887ATPase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
Blast
[Close]
BLAST of TCONS_00018771 vs. Swiss-Prot (Human)
Match: ASNA (ATPase ASNA1 OS=Homo sapiens GN=ASNA1 PE=1 SV=2)

HSP 1 Score: 393.66 bits (1010), Expect = 1.816e-135
Identity = 196/325 (60.31%), Postives = 262/325 (80.62%), Query Frame = 2 
Query:   56 DFEEMAPSIQHLLDQKELRWVFXXXXXXXXXXXCSCSVAIQLAKHKKNVLIISTDPAHNISDAFDQKFGRKPTAVKGFTNLFAMEIDPNLGLTKLPEDVLEDQDFMSMGGKMFQDLLGAFPGIDEAMSFAEVMKLVRSMDFSVVVFDTAPTGHTLRLISFPSVMXXXXXXXXXXXXRIQPMIQQFSTLLGMQDMNMEQFTSRLDETLPVIKEVSAQFQNPDHTTFVCVCISEFLSLYETEHLVQELTKMNMDIRTIIVNQLVFPKKLQGGSACDLCSARSNIQKKYLEEIADLYEDFHVIKLPLLPKEVRGPQQIETFSDWLINP 1030
            D E + P++ ++++Q+ L+W+FVGGKGGVGKTTCSCS+A+QL+K +++VLIISTDPAHNISDAFDQKF + PT VKG+ NLFAMEIDP+LG+ +LP++  E+ + +SMG KM Q+ + AFPGIDEAMS+AEVM+LV+ M+FSVVVFDTAPTGHTLRL++FP+++E+ L +L+ +K++I P I Q   +LG+ DMN +Q  S+L+ETLPVI+ VS QF++P+ TTF+CVCI+EFLSLYETE L+QEL K  +D   IIVNQLVFP   +    C +C AR  IQ KYL+++ DLYEDFH++KLPLLP EVRG  ++ TFS  L+ P
Sbjct:   20 DVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTDPAHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLSLYETERLIQELAKCKIDTHNIIVNQLVFPDPEK---PCKMCEARHKIQAKYLDQMEDLYEDFHIVKLPLLPHEVRGADKVNTFSALLLEP 341
The following BLAST results are available for this feature:
BLAST of TCONS_00018771 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASNA1.816e-13560.31ATPase ASNA1 OS=Homo sapiens GN=ASNA1 PE=1 SV=2[more]
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