TCONS_00018910 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018910
Unique NameTCONS_00018910
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1625

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018910 ID=TCONS_00018910|Name=TCONS_00018910|organism=Clytia hemisphaerica|type=transcript|length=1625bp
TTTCCATTTTTCCTTGTTTAGTTAAGATAgggtagaaagaaaaaaaaatg
gtcaaaagaaaaatagaaacctTGGAATCTCCAACAACAAAAATTACTAA
AAGTGGTGAACAAAGCAATCAAAATGaggaaagcaaagaaaaactgatAC
CTCTTGGTTTTGATGAAAGTGACTGTGACACCATCATTATGACAAAGGAT
AAAACTGTACATATACCATCAAGCTTTTTGAATATGATGTCATCAGATAG
CAAGGCATTTGTTACTGGTAAAAAAATGATTGATGTTATGTCGGAGAATT
TGATCCATGCATTATCATTTTATGACCCAAAGAACTGGAAAGAAAGTGAT
GACATTAAACattccACCCTGGATGAGTTACTTCACATTTCCAACATTTT
AAATCTGAAATCATTGAAGAAATATGTAATCGACCAATTTGTAGATAATC
TCTGGGTGGATGAGATTGATAGTGATTTCATTGACTCTTTAAATATCGCA
CAACGCCATGAAATGTACACTCTCGTAAATAAATTACTCTCTAATGGATA
TGGAGCTAAACTGGAGAGCTTTGATTTGATAGAAACAGTAGGCTTTAAAA
GACTACACAAAGAAATACGTTACGAGATATTGAAAGGTGCCATTTACAGA
GAAAACGATGGTAACAAGGAAGCAAGCTATTATGATGCTGAATTAATGGA
ATTGAAatttatcttcaattttttcGATATGATGGTTTACGAGAACCGGG
CTGTTAATATCAttgcaaaaaaatgtttgtgGACTTTACCATTTCACGAG
GCTACCCTTGAAGATTCCGTTGATATCAAATTAATATCTTGCGAAAAAGA
CTTGAAAGATTGCGTCACAATTATCGTTGAAAATCAGGAAATAAGCGTCA
AATCTTTCCTTTTGACAAATAACTCGCCTGTGTTCAAAGCCATGTTGAAT
TCGAGTTCGTTCAAGGAAGGGCAGAGCAGAAGAATAGAGTTGCCTGGGAA
AAAGTACctggaagtagttttttttctccaatGCCTTCACTCACCTCAAG
ATTTAAGAGATATTTGTGATTATCCCGATGTATTTATCTTATCACAGCTT
TGCAGAGAGTACCAAGTCGATTGGTTGTTGGAAAAAATTAGAGATTTTAT
CAATAAAGGAAGATTCTTAACAAAGAGATGgattttgaaaggtattttgC
TCTGTGAAGCAATGAATTTCGATCCGTGTGATATATTGGTTAACTCAATT
GAGGATAATTTCCTTGATATTCACATGTCGAAGGATTTTATGGAGTTGAG
CTCGAAAATGCAAGTCTTGATTGCTCGAAAACGTATGTGGCTTTTACTTC
GAAATTccgacgaaaaaaaacgaaagatGTTGTTCAATGAGGAAGACTGC
GGATTTCTGTCGATTTTTGATGATCAATTTGTCTTTGACTTTAGATTTAA
CGGGAGTGAGAAAGAGTACATTAAACAATTCAAGAAATAAGAATTTGTGT
GACTGGAATaatataattaaaaagaaatttctgaGAGAATGACATCATAT
TGGGTTTTCTTGCTTAGTGCATTAACTTTCTTGTCGTgtataattaaaaa
aaagtcgaTTTATTGCAGACTTGAG
Run BLAST on NCBI

protein sequence of TCONS_00018910-protein

>TCONS_00018910-protein ID=TCONS_00018910-protein|Name=TCONS_00018910-protein|organism=Clytia hemisphaerica|type=polypeptide|length=480bp
MVKRKIETLESPTTKITKSGEQSNQNEESKEKLIPLGFDESDCDTIIMTK
DKTVHIPSSFLNMMSSDSKAFVTGKKMIDVMSENLIHALSFYDPKNWKES
DDIKHSTLDELLHISNILNLKSLKKYVIDQFVDNLWVDEIDSDFIDSLNI
AQRHEMYTLVNKLLSNGYGAKLESFDLIETVGFKRLHKEIRYEILKGAIY
RENDGNKEASYYDAELMELKFIFNFFDMMVYENRAVNIIAKKCLWTLPFH
EATLEDSVDIKLISCEKDLKDCVTIIVENQEISVKSFLLTNNSPVFKAML
NSSSFKEGQSRRIELPGKKYLEVVFFLQCLHSPQDLRDICDYPDVFILSQ
LCREYQVDWLLEKIRDFINKGRFLTKRWILKGILLCEAMNFDPCDILVNS
IEDNFLDIHMSKDFMELSSKMQVLIARKRMWLLLRNSDEKKRKMLFNEED
CGFLSIFDDQFVFDFRFNGSEKEYIKQFKK
Run BLAST on NCBI

transcript from alignment at sc0000313:70451..79019+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018910 ID=TCONS_00018910|Name=TCONS_00018910|organism=Clytia hemisphaerica|type=transcript|length=8569bp|location=Sequence derived from alignment at sc0000313:70451..79019+ (Clytia hemisphaerica)
TTTCCATTTTTCCTTGTTTAGTTAAGATAgggtagaaagaaaaaaaaatg gtcaaaagaaaaatagaaacctTGGAATCTCCAACAACAAAAATTACTAA AAGTGGTGAACAAAGCAATCAAAATGaggaaagcaaagaaaaactgatAC CTCTTGGTTTTGATGAAAGTGACTGTGACACCATCATTATGACAAAGGAT AAAACTGTACATATACCATCAAGCTTTTTGAATATGATGTCATCAGATAG CAAGGCATTTGTTACTGGTAAAAAAATGATTGATGTTATGTCGGAGAATT TGATCCATGCATTATCATTTTATGACCCAAAGAACTGGAAAGAAAGTGAT GACATTAAACGTAAGTATTCTTTTCATGTTTTAACCATCTCTAACAGTAA CAATGTGAACTTTCCCACATTACTTTGGGGGAAATTTGTAGACCTCAGAC AATTGTCAGATTATATGTTTTAATCACAACTGCAGTTCTCAACACAATTT TAGCTTGAATCTCAAATGTTTCTGTCATATTGGTTAgtcaatttttgtca aaatgagGGTGAAACTTTTTGGTAGCTTTATTATACTTCTACTTGTCTTC TacatactaaaagtctaattctgaATGAGCCGTGGGGgaaccattatgga tttttgagatggggttCGTTACGTGACAGATTGTTTGAATAAACGGTTGA AAATCAAAGCGAAAGAGTTCAGGagaagagtgtgaaaattagcgtttcaG GGAAGAGGTCtttgcagtgtcaatctttcgcaaatttaaaaacccacttt cccttggaaataattgatctttttggacctacctccgggtaccccggtgg aggttttataaattaacccatgtccgttcgtctgttcgttcgtccgtccg tccgttaccagcttttctcaggattggctcattagttttttctgattttt tgcacaatgatgcaaaatcgcaatgcccagaacgtgacggagaccgattt ttgagaaaaattttatttgggcaaatttgggccaaaaactacctaaaaat agggNcgatttttgagaaaaaatttatttgggcaaattcgggccaaaaac tacctaaaaatagggtttttttgactttgtgcaaaatcctgtcattactt ttttctgattttttgtacaaagatggagggcaagattctctaaagaatgg ctgaggtggtttttcccggaaaattcttattcgccttaaaaaacggattt tcgtattttggggaaattcccttaaccaaataagaaaatatagcttctCT CAAAGttaactcattatttttttgtgattttttgcacaatgatgcaaaat ggcaatgcctaaaatgtgacggagcccgattttcgaaaaaatatatattt gggcaaatttgggccaataacctcctaaaaatagggttttttggactttg tgcaaaatcctgtcattacttttttctgattttttgtacaacgatgcaaa atggcaatgcctaaaatgtgtcggtgcccgattttcgaaaaaaaatatat ttgggcaaatttgggccaaaaactgcctaaaaatagggttttttggactt tgtgcaaaatcctgtcattacttttttctNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTTGGGCATAAAAAggtggctgttttag ccaatctagagggtcgaaattcaaaaattttctagcccgtcgggcccaac catggtgggccctcctcacacactatatatagctgaattactatatatag ctgaatctttTTTGCAGGGTATGCTAAAAATCCTAGATACGCCCCTGTAG AGTgtatttgggccaaaaactgcttaaaaataggggtttttgggcctgaa tggtttaagtgattttcgtatttggggaaattcctttttacccttttaca ttattcaaaacacaagctttatttttccattcggaatttttgtacaatta ttgtcacttttttcttattttcatctgatgttaatcataaggtaggtcca ttcagcatgttgcttgtttgtttttttgggactCTTGGGGCATAAGCTGC CCATTGACcgcaaaagtttcaaaattcgcAAATTGACTCGATGACGTCTT AGGACattaaatttgagatttttcgaGTTTTGATCGGTCCTTAATGGCAA TTTTTCGTTCCTTGTGCTTAAATCAGTCTATAGTATCCCCTTTACtatcc aaagggcttatgatgcgttcagcttatctactctTCAGCGGGTGTGACGC CGGGTGACAGCTAGACTGTATTATTTGAGTTCCTACTGTCAGGTTTTTTA TATAGTTGGAAATATAATGAAGTTAAGcttgttttaaaattatcttgGTT TTTANTATTTGAGTTCCTACTGTCAGGTGTTTTATATAGTTGGAAATATA ATGAAGTTAAGcttgttttaaaattatcttgGTTTTTACTTTACCTTTTT ATTAGGTCTACAAATTGTTTACAAGTTGAATTGCTCAGCTGTATTTTACT TATGCTATCCATAtattactttttggacctaccccggtggggtggaggtc ctataaattaatctttgtccgttcgtccgttcgttcgttattagcttttc tcgtgattggctcattagctgtgtaactataaaccctcgaatgtgacgga gcccgagtttcgaaaaaaaaattttgggcaaatttgggccaaaaaacggc taaaaaacgggttttttggactttgtaaaaaattggatcattaacttttt ctgaatttttgcatgaaagtagggtaccatcaaagatttattatacactg gataaacgactcataaaacgatggagagcgatcattgtattttcattgtt tcagaaaacaattgatgttcaagCTTTGTCCGNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNaacaaaatatcatgggacccaccccctaatttagtaccaatacca atctgacaaatttaagtttaaagctgtttaaaggggacccatcccctccc acacaaactaagagaaacttcaaaaaaactcatttttgaaatattctttc ttcaacacaacacaaaaaatgtcatatgctaaactagaaaatgactgaaa actgacaatataataaaaacaaacccaatgaagctagcaaaatcaatctg aatcaatattatctgaatataattgatgtgcaaaaactaggaggagctat tattagtacataattctagaacagaatagattcactcattaccaaatgct atcacagaaaaaatgtttttgcttcaggcttgaaaaataaaacttgaaaa tatcgaaaaagtccaaaataaacaaacttcaaagtcatttatacttatta ctcatttacagtcattatactcaaaagctaaaacaaatccaattgaaacc tgtttagatTGATATGTACTCCGGGGTATCttctagctataagggcaaaa attaggaaagttttgctgtcattttgatatggatacataccaactttctg aatcgtattatttaaaaaaaaggggcacccaccccctattttagtatcaa taccaactgaggataactctttttttctaaaaaaagggggacccaccccc catcaataccaacttgacttttcagacttttaaaggaaaaaaagccacca ccacccggctatgggtctggtatctggatgttgccccccccccccccccg ggaaaaactggtcaaattcgatatttatttataagcacattatcaattac ttaggtattagctttacTCGAGGTTGgcgctttcattctttatgatcttt cgcacaaagatgcataactttaaaccctcgaatgtgacggagccgaattt cgggggggggggatttttgggcaaatttgggccaaaaaacggctaaaaaa cggagtttgaaaaattggatcattttaaactttttctgattatttgcatg aaagtagggtaccatcataggtaaaagatggctcaagcagattttttcaa aaaaattttgttggcttaaaaacgcatgtttatctataagaatcactatt aataagcatacatcaatgttcttagccaaattactcaattttttgatgag atgattgttttttttgctccaCAAATtattgaatatgaaagaatattttt gccCACAAATtattgaatatgaaagaatatttcaagagcatgaaattttg ctttcttaacgcttttttataagaaacaaacgactaattttaatagaccG TCACCATTTGTGTTctaaatgattgtttaatgaTCACGTCCCgcagatat caattatatatgtgttaaatgcataaccaagtaggtccataaaagtatca cttgttctgaCTTCAGCTTTTCTGGAATAAgctaaattttgttttatttt tcagattccACCCTGGATGAGTTACTTCACATTTCCAACATTTTAAATCT GAAATCATTGAAGAAATATGTAATCGACCAATTTGTAGATAATCTCTGGG TGGATGAGATTGATAGTGATTTCATTGACTCTTTAAATATCGCACAACGC CATGAAATGTACACTCTCGTAAATAAATTACTCTCTAATGGATATGGAGC TAAACTGGAGAGCTTTGATTTGATAGAAACAGTAGGCTTTAAAAGACTAC ACAAAGAAATACGTTACGAGATATTGAAAGGTGCCATTTACAGAGAAAAC GATGGTAACAAGGAAGCAAGCTATTATGATGCTGAATTAATGGAATTGAA atttatcttcaattttttcGATATGATGGTTTACGAGAACCGGGCTGTTA ATATCAttgcaaaaaaatgtttgtgGACTTTACCATTTCACGAGGCTACC CTTGAAGATTCCGTTGATATCAAATTAATATCTTGCGAAAAAGACTTGAA AGATTGCGTCACAATTATCGTTGAAAATCAGGAAATAAGCGTCAAATCTT TCCTTTTGACAAATAACTCGCCTGTGTTCAAAGCCATGTTGAATTCGAGT TCGTTCAAGGAAGGGCAGAGCAGAAGAATAGAGTTGCCTGGGAAAAAGTA CctggaagtagttttttttctccaatGCCTTCACTCACCTCAAGATTTAA GAGATATTTGTGGTAgggtttcattttttatctctctttaatttaagttt ttcttataatttatgttctacaatcatggacaaaatatttgagacaaaat ggatttccctgcgaaatttttaagtacggttggaaagtagagttttaatc ccaaaaaaaagttgaaagctgaaaaaattctttaaaaaattaatccAGGT CCagggattttcgaaaaattaacaagcggggggggggcgtttatttggaa cctaagagtaatagTGAGGTCtggtagcacataaaaacgtaagaatactt cagatggtgataaaagcatgaaatttggcaccctTAGATGGtataaaact taattttaaacagtaacaccaaattttgccacctggtcACCtgcctgatg acgtcatcaggtggctaagaaaaaaattattattttgaaaatattcaaaa tctgatttttccagcagaaagagcatgaaattgctgatgaaaatcgaggt ataaaacataccttgaaaatcttcctttCAATAGCTATGGAGGGTTGAaa tttttgtgatgacgtcatcacaagcctttccaggcaaaacttaaaaacct cgtaattttggaacaaattgaccaaatttgatgttttatacaTAAATTCA TATCAAATTAAttgcttttttaaaaacatagtTACTGCAACTTATCTCTC ACTTTTTTTCAGATTATCCCGATGTATTTATCTTATCACAGCTTTGCAGA GAGTACCAAGTCGATTGGTTGTTGGAAAAAATTAGAGATTTTATCAATAA AGGAAGATTCTTAACAAAGAGATGgattttgaaaggtattttgCTCTGTG AAGCAATGAATTTCGATCCGTGTGATATATTGGTTAACTCAATTGAGGAT AATTTCCTTGATATTCACATGTCGAAGGATTTTATGGAGTTGAGCTCGAA AATGCAAGTCTTGATTGCTCGAAAACGTATGTGGCTTTTACTTCGAAATT ccgacgaaaaaaaacgaaagatGTTGTTCAATGAGGAAGACTGCGGATTT CTGTCGATTTTTGATGATCAATTTGTCTTTGACTTTAGATTTAACGGGAG TGAGAAAGAGTACATTAAACAATTCAAGAAATAAGAATTTGTGTGACTGG AATaatataattaaaaagaaatttctgaGAGAATGACATCATATTGGGTT TTCTTGCTTAGTGCATTAACTTTCTTGTCGTgtataattaaaaaaaagtc gaTTTATTGCAGACTTGAG

Coding sequence (CDS) from alignment at sc0000313:70451..79019+

>TCONS_00018910 ID=TCONS_00018910|Name=TCONS_00018910|organism=Clytia hemisphaerica|type=CDS|length=4329bp|location=Sequence derived from alignment at sc0000313:70451..79019+ (Clytia hemisphaerica)
atggtcaaaagaaaaatagaaacctTGGAATCTCCAACAACAAAAATTAC
TAAAAGTGGTGAACAAAGCAATCAAAATGaggaaagcaaagaaaaactga
tACCTCTTGGTTTTGATGAAAGTGACTGTGACACCATCATTATGACAAAG
GATAAAACTGTACATATACCATCAAGCTTTTTGAATATGATGTCATCAGA
TAGCAAGGCATTTGTTACTGGTAAAAAAATGATTGATGTTATGTCGGAGA
ATTTGATCCATGCATTATCATTTTATGACCCAAAGAACTGGAAAGAAAGT
GATGACATTAAACattccACCCTGGATGAGTTACTTCACATTTCCAACAT
TTTAAATCTGAAATCATTGAAGAAATATGTAATCGACCAATTTGTAGATA
ATCTCTGGGTGGATGAGATTGATAGTGATTTCATTGACTCTTTAAATATC
GCACAACGCCATGAAATGTACACTCTCGTAAATAAATTACTCTCTAATGG
ATATGGAGCTAAACTGGAGAGCTTTGATTTGATAGAAACAGTAGGCTTTA
AAAGACTACACAAAGAAATACGTTACGAGATATTGAAAGGTGCCATTTAC
AGAGAAAACGATGGTAACAAGGAAGCAAGCTATTATGATGCTGAATTAAT
GGAATTGAAatttatcttcaattttttcGATATGATGGTTTACGAGAACC
GGGCTGTTAATATCAttgcaaaaaaatgtttgtgGACTTTACCATTTCAC
GAGGCTACCCTTGAAGATTCCGTTGATATCAAATTAATATCTTGCGAAAA
AGACTTGAAAGATTGCGTCACAATTATCGTTGAAAATCAGGAAATAAGCG
TCAAATCTTTCCTTTTGACAAATAACTCGCCTGTGTTCAAAGCCATGTTG
AATTCGAGTTCGTTCAAGGAAGGGCAGAGCAGAAGAATAGAGTTGCCTGG
GAAAAAGTACctggaagtagttttttttctccaatGCCTTCACTCACCTC
AAGATTTAAGAGATATTTGTGATTATCCCGATGTATTTATCTTATCACAG
CTTTGCAGAGAGTACCAAGTCGATTGGTTGTTGGAAAAAATTAGAGATTT
TATCAATAAAGGAAGATTCTTAACAAAGAGATGgattttgaaaggtattt
tgCTCTGTGAAGCAATGAATTTCGATCCGTGTGATATATTGGTTAACTCA
ATTGAGGATAATTTCCTTGATATTCACATGTCGAAGGATTTTATGGAGTT
GAGCTCGAAAATGCAAGTCTTGATTGCTCGAAAACGTATGTGGCTTTTAC
TTCGAAATTccgacgaaaaaaaacgaaagatGTTGTTCAATGAGGAAGAC
TGCGGATTTCTGTCGATTTTTGATGATCAATTTGTCTTTGACTTTAGATT
TAACGGGAGTGAGAAAGAGTACATTAAACAATTCAAGAAATAAatggtca
aaagaaaaatagaaacctTGGAATCTCCAACAACAAAAATTACTAAAAGT
GGTGAACAAAGCAATCAAAATGaggaaagcaaagaaaaactgatACCTCT
TGGTTTTGATGAAAGTGACTGTGACACCATCATTATGACAAAGGATAAAA
CTGTACATATACCATCAAGCTTTTTGAATATGATGTCATCAGATAGCAAG
GCATTTGTTACTGGTAAAAAAATGATTGATGTTATGTCGGAGAATTTGAT
CCATGCATTATCATTTTATGACCCAAAGAACTGGAAAGAAAGTGATGACA
TTAAACattccACCCTGGATGAGTTACTTCACATTTCCAACATTTTAAAT
CTGAAATCATTGAAGAAATATGTAATCGACCAATTTGTAGATAATCTCTG
GGTGGATGAGATTGATAGTGATTTCATTGACTCTTTAAATATCGCACAAC
GCCATGAAATGTACACTCTCGTAAATAAATTACTCTCTAATGGATATGGA
GCTAAACTGGAGAGCTTTGATTTGATAGAAACAGTAGGCTTTAAAAGACT
ACACAAAGAAATACGTTACGAGATATTGAAAGGTGCCATTTACAGAGAAA
ACGATGGTAACAAGGAAGCAAGCTATTATGATGCTGAATTAATGGAATTG
AAatttatcttcaattttttcGATATGATGGTTTACGAGAACCGGGCTGT
TAATATCAttgcaaaaaaatgtttgtgGACTTTACCATTTCACGAGGCTA
CCCTTGAAGATTCCGTTGATATCAAATTAATATCTTGCGAAAAAGACTTG
AAAGATTGCGTCACAATTATCGTTGAAAATCAGGAAATAAGCGTCAAATC
TTTCCTTTTGACAAATAACTCGCCTGTGTTCAAAGCCATGTTGAATTCGA
GTTCGTTCAAGGAAGGGCAGAGCAGAAGAATAGAGTTGCCTGGGAAAAAG
TACctggaagtagttttttttctccaatGCCTTCACTCACCTCAAGATTT
AAGAGATATTTGTGATTATCCCGATGTATTTATCTTATCACAGCTTTGCA
GAGAGTACCAAGTCGATTGGTTGTTGGAAAAAATTAGAGATTTTATCAAT
AAAGGAAGATTCTTAACAAAGAGATGgattttgaaaggtattttgCTCTG
TGAAGCAATGAATTTCGATCCGTGTGATATATTGGTTAACTCAATTGAGG
ATAATTTCCTTGATATTCACATGTCGAAGGATTTTATGGAGTTGAGCTCG
AAAATGCAAGTCTTGATTGCTCGAAAACGTATGTGGCTTTTACTTCGAAA
TTccgacgaaaaaaaacgaaagatGTTGTTCAATGAGGAAGACTGCGGAT
TTCTGTCGATTTTTGATGATCAATTTGTCTTTGACTTTAGATTTAACGGG
AGTGAGAAAGAGTACATTAAACAATTCAAGAAATAAatggtcaaaagaaa
aatagaaacctTGGAATCTCCAACAACAAAAATTACTAAAAGTGGTGAAC
AAAGCAATCAAAATGaggaaagcaaagaaaaactgatACCTCTTGGTTTT
GATGAAAGTGACTGTGACACCATCATTATGACAAAGGATAAAACTGTACA
TATACCATCAAGCTTTTTGAATATGATGTCATCAGATAGCAAGGCATTTG
TTACTGGTAAAAAAATGATTGATGTTATGTCGGAGAATTTGATCCATGCA
TTATCATTTTATGACCCAAAGAACTGGAAAGAAAGTGATGACATTAAACa
ttccACCCTGGATGAGTTACTTCACATTTCCAACATTTTAAATCTGAAAT
CATTGAAGAAATATGTAATCGACCAATTTGTAGATAATCTCTGGGTGGAT
GAGATTGATAGTGATTTCATTGACTCTTTAAATATCGCACAACGCCATGA
AATGTACACTCTCGTAAATAAATTACTCTCTAATGGATATGGAGCTAAAC
TGGAGAGCTTTGATTTGATAGAAACAGTAGGCTTTAAAAGACTACACAAA
GAAATACGTTACGAGATATTGAAAGGTGCCATTTACAGAGAAAACGATGG
TAACAAGGAAGCAAGCTATTATGATGCTGAATTAATGGAATTGAAattta
tcttcaattttttcGATATGATGGTTTACGAGAACCGGGCTGTTAATATC
AttgcaaaaaaatgtttgtgGACTTTACCATTTCACGAGGCTACCCTTGA
AGATTCCGTTGATATCAAATTAATATCTTGCGAAAAAGACTTGAAAGATT
GCGTCACAATTATCGTTGAAAATCAGGAAATAAGCGTCAAATCTTTCCTT
TTGACAAATAACTCGCCTGTGTTCAAAGCCATGTTGAATTCGAGTTCGTT
CAAGGAAGGGCAGAGCAGAAGAATAGAGTTGCCTGGGAAAAAGTACctgg
aagtagttttttttctccaatGCCTTCACTCACCTCAAGATTTAAGAGAT
ATTTGTGATTATCCCGATGTATTTATCTTATCACAGCTTTGCAGAGAGTA
CCAAGTCGATTGGTTGTTGGAAAAAATTAGAGATTTTATCAATAAAGGAA
GATTCTTAACAAAGAGATGgattttgaaaggtattttgCTCTGTGAAGCA
ATGAATTTCGATCCGTGTGATATATTGGTTAACTCAATTGAGGATAATTT
CCTTGATATTCACATGTCGAAGGATTTTATGGAGTTGAGCTCGAAAATGC
AAGTCTTGATTGCTCGAAAACGTATGTGGCTTTTACTTCGAAATTccgac
gaaaaaaaacgaaagatGTTGTTCAATGAGGAAGACTGCGGATTTCTGTC
GATTTTTGATGATCAATTTGTCTTTGACTTTAGATTTAACGGGAGTGAGA
AAGAGTACATTAAACAATTCAAGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010600XLOC_010600Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018910-proteinTCONS_00018910-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018910-exon-sc0000313-1491911889:70451..70810TCONS_00018910-exon-sc0000313-1491911889:70451..70810Clytia hemisphaericaexon
TCONS_00018910-exon-sc0000313-1510915933:70451..70810TCONS_00018910-exon-sc0000313-1510915933:70451..70810Clytia hemisphaericaexon
TCONS_00018910-exon-sc0000313-1575043694:70451..70810TCONS_00018910-exon-sc0000313-1575043694:70451..70810Clytia hemisphaericaexon
TCONS_00018910-exon-sc0000313-1491911889:77055..77762TCONS_00018910-exon-sc0000313-1491911889:77055..77762Clytia hemisphaericaexon
TCONS_00018910-exon-sc0000313-1510915933:77055..77762TCONS_00018910-exon-sc0000313-1510915933:77055..77762Clytia hemisphaericaexon
TCONS_00018910-exon-sc0000313-1575043694:77055..77762TCONS_00018910-exon-sc0000313-1575043694:77055..77762Clytia hemisphaericaexon
TCONS_00018910-exon-sc0000313-1491911889:78463..79019TCONS_00018910-exon-sc0000313-1491911889:78463..79019Clytia hemisphaericaexon
TCONS_00018910-exon-sc0000313-1510915933:78463..79019TCONS_00018910-exon-sc0000313-1510915933:78463..79019Clytia hemisphaericaexon
TCONS_00018910-exon-sc0000313-1575043694:78463..79019TCONS_00018910-exon-sc0000313-1575043694:78463..79019Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000313supercontigsc0000313:70451..79019 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.6233 9.91959 4.79427 3.94108 11.0149 7.84971 7.27992 7.78038 2.93475 2.66753 3.24915 2.50296 2.28286 2.40538 1.72147 1.34356 2.29465 3.18091 0.346241 0.61315 3.00384 3.33207 10.9452 9.01051 4.03505 6.45813 6.45879 2.19989 6.86882 8.55655
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018910 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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